Lag0007698 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0007698
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Aspartyl protease family protein
Location	chr9: 3247243 .. 3247633 (-)
RNA-Seq Expression	Lag0007698
Synteny	Lag0007698

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCTCAAATCCCAAGATGTCCAATTATTACCTTTTGAATTTGATTGGAATCAGCATCGGTGGGGTGAAATTGGATGCGCTGCGCTTGGCTTCGAATAATGGGGTTGTGAGTTTAATCTTACTGGGGTTAAGTAAGTGGATATTCCGCCCGTGAAATTTTACTTTGAAGGTGATGTAGAGTTGAGTGTGGATGTGAAGGGATTTTTTACTTTGTGAAATCTGATTCTTCTCGAAGCTGTTCGGCGTTTGCGAGTGCGGCTGATGAAGATCACCTTGGGATTATTGGAAATTATCAGCAGAAGAATCAAAGGGTTGTTTATAATACCAAGGAATCCAAGCTGGGTTGTTTGGCTTTTGGGTTGTTTATAATTATAACTGATAGTATATAA

mRNA sequence

ATGATCTCAAATCCCAAGATGTCCAATTATTACCTTTTGAATTTGATTGGAATCAGCATCGGTGGGGTGAAATTGGATGCGCTGCGCTTGGCTTCGAATAATGGGGTTGTGAGTTTAATCTTACTGGGGTTAAGGATTTTTTACTTTGTGAAATCTGATTCTTCTCGAAGCTGTTCGGCGTTTGCGAGTGCGGCTGATGAAGATCACCTTGGGATTATTGGAAATTATCAGCAGAAGAATCAAAGGGTTGTTTATAATACCAAGGAATCCAAGCTGGGTTGTTTGGCTTTTGGGTTGTTTATAATTATAACTGATAGTATATAA

Coding sequence (CDS)

ATGATCTCAAATCCCAAGATGTCCAATTATTACCTTTTGAATTTGATTGGAATCAGCATCGGTGGGGTGAAATTGGATGCGCTGCGCTTGGCTTCGAATAATGGGGTTGTGAGTTTAATCTTACTGGGGTTAAGGATTTTTTACTTTGTGAAATCTGATTCTTCTCGAAGCTGTTCGGCGTTTGCGAGTGCGGCTGATGAAGATCACCTTGGGATTATTGGAAATTATCAGCAGAAGAATCAAAGGGTTGTTTATAATACCAAGGAATCCAAGCTGGGTTGTTTGGCTTTTGGGTTGTTTATAATTATAACTGATAGTATATAA

Protein sequence

MISNPKMSNYYLLNLIGISIGGVKLDALRLASNNGVVSLILLGLRIFYFVKSDSSRSCSAFASAADEDHLGIIGNYQQKNQRVVYNTKESKLGCLAFGLFIIITDSI

Homology

[Close]

BLAST of Lag0007698 vs. NCBI nr
Match: XP_023004737.1 (aspartyl protease family protein At5g10770-like [Cucurbita maxima])

HSP 1 Score: 97.8 bits (242), Expect = 5.9e-17
Identity = 62/158 (39.24%), Postives = 79/158 (50.00%), Query Frame = 0


Query: 1   MISNPKMSNYYLLNLIGISIGGVKLDALRLASNNGVVSLI-------------------- 60
           M+ NP+MSN+Y LNL GI++GG+KL   RLAS+NGV+SL+                    
Sbjct: 326 MVPNPQMSNFYTLNLTGITVGGLKLVVPRLASSNGVLSLLDSGTVITRLPPSVYKALKEE 385

Query: 61  ----------------------LLGLR-----------------------IFYFVKSDSS 94
                                 L GL+                       +FY+VKSD S
Sbjct: 386 FERQFSVYRTAPGYSLLDTCYNLSGLKQVKTPNVKLHFEDEGEMSVDVGGLFYYVKSDGS 445

[Close]

BLAST of Lag0007698 vs. NCBI nr
Match: XP_022959733.1 (aspartyl protease family protein At5g10770-like [Cucurbita moschata])

HSP 1 Score: 97.1 bits (240), Expect = 1.0e-16
Identity = 61/158 (38.61%), Postives = 78/158 (49.37%), Query Frame = 0


Query: 1   MISNPKMSNYYLLNLIGISIGGVKLDALRLASNNGVVSLI-------------------- 60
           M+ NP+MSN+Y LNL GI++GG+KL   RLA + GV+SL+                    
Sbjct: 323 MVPNPQMSNFYTLNLTGITVGGLKLVVPRLAPSKGVLSLLDSGTVITRLPPSVYQALKEE 382

Query: 61  ----------------------LLGLR-----------------------IFYFVKSDSS 94
                                 L GL+                       +FY+VKSD S
Sbjct: 383 FVRQFSGYPTAAGYSLLDTCYNLSGLKEVKTPNVKLHFEGEGEMSVDVGGLFYYVKSDGS 442

[Close]

BLAST of Lag0007698 vs. NCBI nr
Match: XP_008461208.1 (PREDICTED: aspartyl protease family protein At5g10770 [Cucumis melo])

HSP 1 Score: 96.3 bits (238), Expect = 1.7e-16
Identity = 63/158 (39.87%), Postives = 74/158 (46.84%), Query Frame = 0


Query: 1   MISNPKMSNYYLLNLIGISIGGVKLDALRLASNNGVVSLILLGL---------------- 60
           MI NP+MSN+Y LNL GISIGGV L+  RL+SN GV+SL+  G                 
Sbjct: 331 MIQNPQMSNFYFLNLTGISIGGVNLNVPRLSSNEGVLSLLDSGTVITRLSPSIYKAFKAE 390

Query: 61  -------------------------------------------------RIFYFVKSDSS 94
                                                             +FYFVKSD+S
Sbjct: 391 FEKQFSGYRTTPGFSILNTCFNLTGYEEVNIPTVKFIFEGNAEMIVDVEGVFYFVKSDAS 450

[Close]

BLAST of Lag0007698 vs. NCBI nr
Match: KAA0058691.1 (aspartyl protease family protein [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 1.7e-16
Identity = 63/158 (39.87%), Postives = 74/158 (46.84%), Query Frame = 0


Query: 1   MISNPKMSNYYLLNLIGISIGGVKLDALRLASNNGVVSLILLGL---------------- 60
           MI NP+MSN+Y LNL GISIGGV L+  RL+SN GV+SL+  G                 
Sbjct: 332 MIQNPQMSNFYFLNLTGISIGGVNLNVPRLSSNEGVLSLLDSGTVITRLSPSIYKAFKAE 391

Query: 61  -------------------------------------------------RIFYFVKSDSS 94
                                                             +FYFVKSD+S
Sbjct: 392 FEKQFSGYRTTPGFSILNTCFNLTGYEEVNIPTVKFIFEGNAEMIVDVEGVFYFVKSDAS 451

[Close]

BLAST of Lag0007698 vs. NCBI nr
Match: TYK10497.1 (aspartyl protease family protein [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 1.7e-16
Identity = 63/158 (39.87%), Postives = 74/158 (46.84%), Query Frame = 0


Query: 1   MISNPKMSNYYLLNLIGISIGGVKLDALRLASNNGVVSLILLGL---------------- 60
           MI NP+MSN+Y LNL GISIGGV L+  RL+SN GV+SL+  G                 
Sbjct: 252 MIQNPQMSNFYFLNLTGISIGGVNLNVPRLSSNEGVLSLLDSGTVITRLSPSIYKAFKAE 311

Query: 61  -------------------------------------------------RIFYFVKSDSS 94
                                                             +FYFVKSD+S
Sbjct: 312 FEKQFSGYRTTPGFSILNTCFNLTGYEEVNIPTVKFIFEGNAEMIVDVEGVFYFVKSDAS 371

The following BLAST results are available for this feature:

BLAST of Lag0007698 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023004737.1	5.9e-17	39.24	aspartyl protease family protein At5g10770-like [Cucurbita maxima]	[more]
XP_022959733.1	1.0e-16	38.61	aspartyl protease family protein At5g10770-like [Cucurbita moschata]	[more]
XP_008461208.1	1.7e-16	39.87	PREDICTED: aspartyl protease family protein At5g10770 [Cucumis melo]	[more]
KAA0058691.1	1.7e-16	39.87	aspartyl protease family protein [Cucumis melo var. makuwa]	[more]
TYK10497.1	1.7e-16	39.87	aspartyl protease family protein [Cucumis melo var. makuwa]	[more]

BLAST of Lag0007698 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032799	Xylanase inhibitor, C-terminal	PFAM	PF14541	TAXi_C	coord: 48..93 e-value: 2.1E-5 score: 24.4
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 28..97 e-value: 4.1E-8 score: 34.7
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 3..93
IPR001461	Aspartic peptidase A1 family	PANTHER	PTHR47965	ASPARTYL PROTEASE-RELATED	coord: 1..33
IPR001461	Aspartic peptidase A1 family	PANTHER	PTHR47965	ASPARTYL PROTEASE-RELATED	coord: 46..93
None	No IPR available	PANTHER	PTHR47965:SF26	OS08G0267300 PROTEIN	coord: 1..33
None	No IPR available	PANTHER	PTHR47965:SF26	OS08G0267300 PROTEIN	coord: 46..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0007698.1	Lag0007698.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity