Lag0007695 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0007695
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Ty3-gypsy retrotransposon protein
Location	chr9: 3226570 .. 3232125 (+)
RNA-Seq Expression	Lag0007695
Synteny	Lag0007695

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACATTTCCATGAAGTACTGTGTCGAGATAGAATTTGTTTTGCTAGAGGGTCACCAACCAGTCTCTAGTGAGCACTTGCCTTACAGGAATAACTCACACAAGAACCATAGTCGACTTAGGTTGGGGATAGATAATTTCCCAGGACAAAATGTTTCATGTTTTCCAGTTATGCTCCTAGGGTTAGAAACATGAATGAATGACTCAGTTAGGTCCACCATGATTTTAAGATCCAAGTTTTTCATGTTATCAGTTTCAGCCCTTAAGTGGGCTGCTTACTTAGTATATTCATATATACTCACTCATGCTATATGTCTTTCATTTTCAAGTTGTACTTGATCCTATCAGGTGAGTGGCGAGGTCAATGACTTGGTTAGATTATGTGAAGCAGCTTCAAACTATGTCTCTAGGATCTTAGATTTATTTTTCCTAGAGTTTGAGTTCCAGTTTAGTTTCATACTCCTAAATTTTTTAAATTATCAACTTTATGGGGTTTCATTTTAGTTCTTCATTATTTTATTATTTTAAAATTGATTTACTGTTTTTAGGCCCAATTTGACTTAATAAAATGTTGTATATATATATATAATACATATATGCTTTTAAGTTCAAAAGTTATACTATTTCATGCATGTAGTAGTGACCCTTAGGATGTATTTAGCCTCTTAAGTTGGGTTGTTACAATTTCGAAATTTTGAAAACATATTAACATAATCAAGGGCAGATCCAGAAAATATAGTTTAGGGTCCCAAATTTTGTTAAAGTTTTAGAAGTCAACAACATCACTCCATTATATCAAACCAACATCCAATTCTACTTGGGGACCTTTTAAAAACTATTTTTAAACTTTATGGACCAATTAAAAATTAAATTCAAACTCTAGTGACCAAATATGTCACTTTTGGAACCTCACAAGCTAAGTTCAAATATCAAGGACTAAATAGAAATTGATTAAATCTAAGAGACCGAATTTAGTTTGAACACATTGATATTAATTTGGTTAAAATATCATTTTTGTCCTGTAATTTGAGTCTCATTCCATTTAATGGAAAAGGGCAAACCACTAGTGATAGCTCACTTTATGAGCTATTTTTTCCACTATTTTTATTGTTAGTCTTGTGTGTTATTAGGTCAATTTCATACACTTTTGTTTATGTTTTGTAGATTTCAAATATTAGGAATGAAATTGAGTAATTAGAAGTTGATTGAGTGCTTTGGAAGATATTGGAGAAATTGAATCAAAGAAGGAAGCTAAAAGAAAAAAGTTGCAGCTTGGAGACCGAAGCTGCCACAGTTCAACAAGTTTTCCCAAAGAGACAGCGTCTTGACGCTTCTATTTGAAGATCGTCATTTGAAGTGAGTGCGAGGTATCGTCTCGACGCTACTCGATTTTCCTTATTTATTTGAGGTGGTCTGAGGGCAACATTGAGAGGTTGTCTATAGCATCTCGACACTACCGCTATTTCTATAAATATGAAGCGTTTTCCAGCCACAAAAGGGAGAGTTCAATTGGAGAGATTAAGCTCTATTTTGGAAGCAAGCCTAATTGGAAGAGCGGGAGGAAGAGCCGGGAGCGGGATTCCAAGGAGAAGCTCGTGGAGATCGTGACATGGACGAGCGATCAACGTTAGGACTCGAGTTTTTATTCTTCTTCCCTTTATTCTTGTACTTATCTCGTGAGATTTTATTTGAGTGTTTGTCTTGAGTTTATGAACATGAGTAGCTAAGTGGTTTCTTAGGGATTGATGTAGCCGTTGGTTTATGGATTAATTAATTGAATGTTTTATTGCTTGAACTCCATTTATGCATCTATTCGCTCAATGCTTTTAATTTATTGGTCATAGATTGATTGTTGATTGTTCTTAATCTTACGCTCGGGAGAGGAGATTTAGATTAGCTCTTGAATGCATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAAGCTCTTGAATGCATTGTTGAGGATAAGTGGAGACCTCACAATTTATAAGATACATGGACTACTCTTCTCATTGCCAATTGGTTTTGAGATGAAACCCCAAGTTATCCAATATAGTATCAGTCCACCAAACGGGTATTCTTTGATCCAAAAAAAAATGACATCTATAATATAATTAAATTACACACTATATTAAATCAGATAGATTTTGTTTTCTCTAGATTTCATTTTTAAATAAAAAAAGATTTTATTCCCCAATCGAAATGCTTTAAAAAAAAACCATCGACAACAAGTTCGATTTCTTGTCTTCATTCATGGAAACTGAGCAGAATGCTCTAGGTGGACGAGTTGTTTCCAGGTTGCAGAGATGGGGTTGATGAAGATGGTGAGTTGGAAAGAGACCGTATAGATCTGTTCAGAGATTTGAGAAACAATGGTATGACCTACGTATTTGCATGTTCGAAATTTAAATTTAAAGTTTTTTTTCCTTTTTTCATTTTCAGGTTTAAAAATTGTGTATGATATTTTGTTATTTTAATATTTTTTAATCTATTTTTAATTACTGAGAATTTGGTTTAAAACTATCTTAAATGCTTTCAAAATACTAGGTATTTTCGTGGTATGATTTTGTTGTGGTATGATAAATGGTCGAAATTTGAGTTGTTGTTGATGGTTGATTTAATTACTCAGAATTTGATTTAAAACTATCTTCTGGAATTTGAGTTTTCGTGGTATGATTTTGTTCTAGGCAAAGATTGATACAATTTTTTTCACGATATCAAAATACCCATAAATTGTTGTTGATTGTTGATTTATGGGATTTGAGTTGTTTTGATTAGAATTTTAAATTTTTTCTAATTACCCTCTAATTCTAGGATTTTGTTCTTCCATTCTTTAAATTCTTTTGTTTTTTCGGTTTTTTTTTTTAATCAACAACCCTTTATTTAAGGATTTAGTTTATTTATTGAGGTAATTTCAAACTGATTTAGTTTGATTGCAGATTCTATTTAACTAAGGGGTATTTCGGTAAGTTGATAATTTCGATTTTTTAAATCAGAAAATTAATTTGGTCATTTAACTAAATAATAGGGTCAATTACTATTTTTCAAAACAGACTTTTTATTTTGTCTATTCTTGCAGTTAACCCGTTTTTTTATGGTAGGAAGCTAAACTATAGATATAATATAGGGACAACTAGATAAATGATCATTTTTAATGAGCTGTTTTGAAAAATGGTCATCCGAATTTTTCATTTGAAAAATGGTCAATTGCTATTTTTAGTAGGTTTTTTAAACTATGAATTGGACAAAAATGCCCCTAATCGAAATATAAATGCACTGAATAATGATTAGGATGGATTAAATTTACTAACAATCAATACAATATACTCAAAATATATTTTTTTCCTGATAGTTGGAGAGCAGTATTATCTTGCATACACACCGTATTTGAATCATTTACAGTGTCAGAGTGGTCATAATCTACTACAATGTTTGGAGATGGAAAATAATAACCATGAAACATGTATCCTCACAAAGCCTAAATAATGTGAGTTTTCCAAAACTATTGCTATACATAGAAGGTCGACTAATTGTTTCATATTCTCAACCCTAAGCTTACTACTTATGAAACCAATGAGATGTTAAAACAAAGAATCTAGTTCGATACTAGACATCTAGTTTTGAAAATAAAAAACAAAATTTACTTTACATCAATAAAAGAACTGATTGAATTTAAAATAAATGAAAATTAAATCGAGGTAAGATGCCTATGATCAATAGCCCTTTTGATCTGGGAAAGAGGTGAAGACCAACAAACTCGATGTTGATAATGATTGGAAAAACAAATGAAGATGATATTTGGATAATGAAAAACTAAAAATCTTATTGAAAATTGAAAATGAGAATATTCAATTATGTTTGATCTTCAAAATTTCAAAATCTAAATTTGAATTTTGATGGATAGGATAGAAAATAGAGTAAATCTACCCGATTCCTTGATTCATGTGAAATAGTTTGATTTTTTTTTTTTTAATAATTAAATTAGATTGTGGCTCCCTAAAAATAGGTGTGTTGAAGGAGAAATTTTGTCCAATCACAAATTGTCACGTCATTATTTAAAATTAATGACGAAATTACAAATAATTAAATTTTGGACCAATTATAAATTGACATGTGTCCCAAATTTAATTTGAAGACAAAGTTGGCCAATTATAAATTTTTAGGGCCAAATGTCCATTTGATCAATTAATTAAAAATAAATTATTTTGATCAAATTAATTAATTTGACCAATTAATTAAAGAAAATAATTAATTGAATCAAATTTGGGTCTTTTAAGTATTTTGGTCATATGGTTTTGGGTCAAATATAAACCAGATCCAAGACTAAATAGTTGAGCCCAACACCAATAAAGCCCAAGTCCAAATTGTTAGGCCCAAAAGTCACCAGGACCCATCCAGCGAGAACTCTATAAATAGAGAGGTTCTCCTTCATTTCAAGGGTTCAGAAATTCTACACTCTCACAAAGACAAGAGTTCAAAGTTTCAAAGCTCTTAAGCAGAACCAGATAATTCAGAGAGACTCCACCAAGTCTGAAAACCGAAGACTCTCTACAATTCATAAGTTCAAGTGTTGAACACTTCTTGAAGACCAAATACCCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAGGACATCAACACTTCTTGAAGATTGAAGCCTCCTTCAAGACTGGAAGACTTCAAGCTCCAAGAATCCATTGAAACTTCAGACTCGAGATCAAGCGTTTCAGCCCTCGAGTGAAACACATTCACACACAAGAGAGAGAATCAGAGGATTAAAGTTAGAGATTGTACACCCACACGCATACAAACATCAATACAATATATTATTTATTCCACGTGTCTCCATCTTCGAAGTTACGTGTGAACAAATTGGCACGCCCGATGGGACCATCTCCACCTCTCATCTTTCTCTCTTATCTCAAAACACAAGTATAAACATGTCGTTCAAAACTTCTTCAATGGTCGCTGTATGAACAAGTCTTACATGGGTTCAACTGCTCATTGTTGCTTCAATGAACTGAGGTTGCAAGAAGATAAAGCTTCTATCATTGCAAGCGAAGAAACAACCTTACAGGGGCATATACCAATGACAAGTTTCTTGTTAAGTATAACCCTCTGTTTGAACCTGATTCTGACGTAGTGACTGTCATGATGACTGAGACAAAAACTATGGAAGAAAGAATGACTGAGATGCAAGAGCACATCAACAACTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATCGAGCAACTAAAGAGCCAAATTGAGAACCAACATATCGCCGAATCAAGTCAAACCCAAGTGATAAAAAATCATGACAAAGGAAAGATTATAGTGCAAGATGATCAGCCACAGTGTTCTGCTTCGGTTGCTTCACTATCCATCCAACAACTCCAAGATATGATCACAAACTATATCAGAGCTCAGTACGGTGGACCTACTCAAGATTCCCTATTGTATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAACGCCAATCGGATATCAGCCACCAAAATTTTAG

mRNA sequence

ATGTACATTTCCATGAAGTACTGTGTCGAGATAGAATTTGTTTTGCTAGAGGGTCACCAACCAGTCTCTAGTGAGCACTTGCCTTACAGGAATAACTCACACAAGAACCATAGTCGACTTAGGTTGGGGATAGATAATTTCCCAGGACAAAATGTTTCATGTTTTCCAGTTATGCTCCTAGGTGAGTGCGAGGTATCGTCTCGACGCTACTCGATTTTCCTTATTTATTTGAGGTGGTCTGAGGGCAACATTGAGAGGTTGTCTATAGCATCTCGACACTACCGCTATTTCTATAAATATGAAGCGTTTTCCAGCCACAAAAGGGAGAGTTCAATTGGAGAGATTAAGCTCTATTTTGGAAGCAAGCCTAATTGGAAGAGCGGGAGGAAGAGCCGGGAGCGGGATTCCAAGGAGAAGCTCGTGGAGATCGTGACATGGACGAGCGATCAACGTTGCAGAGATGGGGTTGATGAAGATGGTGAGTTGGAAAGAGACCGTATAGATCTGTTCAGAGATTTGAGAAACAATGGGGCATATACCAATGACAAGTTTCTTGTTAAGTATAACCCTCTGTTTGAACCTGATTCTGACGTAGTGACTGTCATGATGACTGAGACAAAAACTATGGAAGAAAGAATGACTGAGATGCAAGAGCACATCAACAACTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATCGAGCAACTAAAGAGCCAAATTGAGAACCAACATATCGCCGAATCAAGTCAAACCCAAGTGATAAAAAATCATGACAAAGGAAAGATTATAGTGCAAGATGATCAGCCACAGTGTTCTGCTTCGGTTGCTTCACTATCCATCCAACAACTCCAAGATATGATCACAAACTATATCAGAGCTCAGTACGGTGGACCTACTCAAGATTCCCTATTGTATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAACGCCAATCGGATATCAGCCACCAAAATTTTAG

Coding sequence (CDS)

ATGTACATTTCCATGAAGTACTGTGTCGAGATAGAATTTGTTTTGCTAGAGGGTCACCAACCAGTCTCTAGTGAGCACTTGCCTTACAGGAATAACTCACACAAGAACCATAGTCGACTTAGGTTGGGGATAGATAATTTCCCAGGACAAAATGTTTCATGTTTTCCAGTTATGCTCCTAGGTGAGTGCGAGGTATCGTCTCGACGCTACTCGATTTTCCTTATTTATTTGAGGTGGTCTGAGGGCAACATTGAGAGGTTGTCTATAGCATCTCGACACTACCGCTATTTCTATAAATATGAAGCGTTTTCCAGCCACAAAAGGGAGAGTTCAATTGGAGAGATTAAGCTCTATTTTGGAAGCAAGCCTAATTGGAAGAGCGGGAGGAAGAGCCGGGAGCGGGATTCCAAGGAGAAGCTCGTGGAGATCGTGACATGGACGAGCGATCAACGTTGCAGAGATGGGGTTGATGAAGATGGTGAGTTGGAAAGAGACCGTATAGATCTGTTCAGAGATTTGAGAAACAATGGGGCATATACCAATGACAAGTTTCTTGTTAAGTATAACCCTCTGTTTGAACCTGATTCTGACGTAGTGACTGTCATGATGACTGAGACAAAAACTATGGAAGAAAGAATGACTGAGATGCAAGAGCACATCAACAACTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATCGAGCAACTAAAGAGCCAAATTGAGAACCAACATATCGCCGAATCAAGTCAAACCCAAGTGATAAAAAATCATGACAAAGGAAAGATTATAGTGCAAGATGATCAGCCACAGTGTTCTGCTTCGGTTGCTTCACTATCCATCCAACAACTCCAAGATATGATCACAAACTATATCAGAGCTCAGTACGGTGGACCTACTCAAGATTCCCTATTGTATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAACGCCAATCGGATATCAGCCACCAAAATTTTAG

Protein sequence

MYISMKYCVEIEFVLLEGHQPVSSEHLPYRNNSHKNHSRLRLGIDNFPGQNVSCFPVMLLGECEVSSRRYSIFLIYLRWSEGNIERLSIASRHYRYFYKYEAFSSHKRESSIGEIKLYFGSKPNWKSGRKSRERDSKEKLVEIVTWTSDQRCRDGVDEDGELERDRIDLFRDLRNNGAYTNDKFLVKYNPLFEPDSDVVTVMMTETKTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVIKNHDKGKIIVQDDQPQCSASVASLSIQQLQDMITNYIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQPPKF

Homology

[Close]

BLAST of Lag0007695 vs. NCBI nr
Match: XP_031742199.1 (uncharacterized protein LOC105435721 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 8.7e-35
Identity = 90/157 (57.32%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 173 LRNNGAYTNDKFLVKYNPLFEPDSDVVTVMMTETKTMEERMTEMQEHINNLMKAIEEKDS 232
           ++ N  Y ND        L E   DV++VMM +   +E  M EM+  IN LMK ++E+D 
Sbjct: 57  IKENPLY-NDYDSASSRSLKEAHPDVMSVMMADV-AVETAMAEMERKINLLMKVVDERDH 116

Query: 233 QIEQLKSQIENQHIAESSQTQVIKNHDKGKIIVQDDQP-QCSASVASLSIQQLQDMITNY 292
           +I  LK Q++ +  AESSQT V+K  DKGK +VQ++QP Q S SVASLS+QQLQDMITN 
Sbjct: 117 EIAALKEQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITNS 176

Query: 293 IRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQPPKF 329
           IRAQYGGP+Q S +YSKPYTKRIDNLR P+GYQPPKF
Sbjct: 177 IRAQYGGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKF 211

[Close]

BLAST of Lag0007695 vs. NCBI nr
Match: XP_031735972.1 (uncharacterized protein LOC116401693 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 8.7e-35
Identity = 90/157 (57.32%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 173 LRNNGAYTNDKFLVKYNPLFEPDSDVVTVMMTETKTMEERMTEMQEHINNLMKAIEEKDS 232
           ++ N  Y ND        L E   DV++VMM +   +E  M EM+  IN LMK ++E+D 
Sbjct: 57  IKENPLY-NDYDSASSRSLKEAHPDVMSVMMADV-AVETAMAEMERKINLLMKVVDERDH 116

Query: 233 QIEQLKSQIENQHIAESSQTQVIKNHDKGKIIVQDDQP-QCSASVASLSIQQLQDMITNY 292
           +I  LK Q++ +  AESSQT V+K  DKGK +VQ++QP Q S SVASLS+QQLQDMITN 
Sbjct: 117 EIAALKEQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITNS 176

Query: 293 IRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQPPKF 329
           IRAQYGGP+Q S +YSKPYTKRIDNLR P+GYQPPKF
Sbjct: 177 IRAQYGGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKF 211

[Close]

BLAST of Lag0007695 vs. NCBI nr
Match: KAA0050518.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 158.7 bits (400), Expect = 8.7e-35
Identity = 80/135 (59.26%), Postives = 104/135 (77.04%), Query Frame = 0


Query: 194 PDSDVVTVMMTETKTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQ 253
           P  ++++VM+T+  T E+RM E+++ +N LMKA+EEKD +I  LK+ IE++  AESS T 
Sbjct: 77  PQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEEKDFEIALLKNHIESRDAAESSHTH 136

Query: 254 VIKNHDKGKIIVQDDQPQCSASVASLSIQQLQDMITNYIRAQYGGPTQDSLLYSKPYTKR 313
            IKN +KGK I+Q+ QPQ S S+ASLS+QQLQ+MI N I+ QYGGP Q   LYSKPYTKR
Sbjct: 137 TIKNANKGKAIMQESQPQNSTSIASLSVQQLQEMIANSIKTQYGGPAQTFSLYSKPYTKR 196

Query: 314 IDNLRTPIGYQPPKF 329
           IDN+R P GYQPPKF
Sbjct: 197 IDNMRMPHGYQPPKF 211

[Close]

BLAST of Lag0007695 vs. NCBI nr
Match: KAA0034095.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 158.3 bits (399), Expect = 1.1e-34
Identity = 83/148 (56.08%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 187 KYNPLFE------PDSDVVTVMMTETKTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQ 246
           +YN L E      P  ++++VM+T+  T E+RM E+++ +N LMKA+EE+D +I  LK+ 
Sbjct: 64  EYNSLSECSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALLKNH 123

Query: 247 IENQHIAESSQTQVIKNHDKGKIIVQDDQPQCSASVASLSIQQLQDMITNYIRAQYGGPT 306
           IE++  AESS T  +KN +KGK I+Q+ QPQ S S+ASLS+QQLQ+MI N I+ QYGGP 
Sbjct: 124 IESRDAAESSHTHTMKNANKGKAIMQESQPQNSTSIASLSVQQLQEMIANSIKTQYGGPA 183

Query: 307 QDSLLYSKPYTKRIDNLRTPIGYQPPKF 329
           Q   LYSKPYTKRIDNLR P GYQPPKF
Sbjct: 184 QTFSLYSKPYTKRIDNLRMPNGYQPPKF 211

[Close]

BLAST of Lag0007695 vs. NCBI nr
Match: KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 157.5 bits (397), Expect = 1.9e-34
Identity = 79/135 (58.52%), Postives = 104/135 (77.04%), Query Frame = 0


Query: 194 PDSDVVTVMMTETKTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQ 253
           P  ++++VM+T+  T E+RM E+++ +N LMKA+EE+D +I  LK+ IE++  AESS T 
Sbjct: 77  PQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALLKNHIESRDAAESSHTH 136

Query: 254 VIKNHDKGKIIVQDDQPQCSASVASLSIQQLQDMITNYIRAQYGGPTQDSLLYSKPYTKR 313
            IKN +KGK I+Q+ QPQ S S+ASLS+QQLQ+MI N I+ QYGGP Q   LYSKPYTKR
Sbjct: 137 TIKNANKGKAIMQESQPQNSTSIASLSVQQLQEMIANSIKTQYGGPAQTFSLYSKPYTKR 196

Query: 314 IDNLRTPIGYQPPKF 329
           IDN+R P GYQPPKF
Sbjct: 197 IDNMRMPHGYQPPKF 211

[Close]

BLAST of Lag0007695 vs. ExPASy TrEMBL
Match: A0A5A7U5H1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001620 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 4.2e-35
Identity = 80/135 (59.26%), Postives = 104/135 (77.04%), Query Frame = 0


Query: 194 PDSDVVTVMMTETKTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQ 253
           P  ++++VM+T+  T E+RM E+++ +N LMKA+EEKD +I  LK+ IE++  AESS T 
Sbjct: 77  PQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEEKDFEIALLKNHIESRDAAESSHTH 136

Query: 254 VIKNHDKGKIIVQDDQPQCSASVASLSIQQLQDMITNYIRAQYGGPTQDSLLYSKPYTKR 313
            IKN +KGK I+Q+ QPQ S S+ASLS+QQLQ+MI N I+ QYGGP Q   LYSKPYTKR
Sbjct: 137 TIKNANKGKAIMQESQPQNSTSIASLSVQQLQEMIANSIKTQYGGPAQTFSLYSKPYTKR 196

Query: 314 IDNLRTPIGYQPPKF 329
           IDN+R P GYQPPKF
Sbjct: 197 IDNMRMPHGYQPPKF 211

[Close]

BLAST of Lag0007695 vs. ExPASy TrEMBL
Match: A0A5A7SY17 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00830 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 5.5e-35
Identity = 83/148 (56.08%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 187 KYNPLFE------PDSDVVTVMMTETKTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQ 246
           +YN L E      P  ++++VM+T+  T E+RM E+++ +N LMKA+EE+D +I  LK+ 
Sbjct: 64  EYNSLSECSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALLKNH 123

Query: 247 IENQHIAESSQTQVIKNHDKGKIIVQDDQPQCSASVASLSIQQLQDMITNYIRAQYGGPT 306
           IE++  AESS T  +KN +KGK I+Q+ QPQ S S+ASLS+QQLQ+MI N I+ QYGGP 
Sbjct: 124 IESRDAAESSHTHTMKNANKGKAIMQESQPQNSTSIASLSVQQLQEMIANSIKTQYGGPA 183

Query: 307 QDSLLYSKPYTKRIDNLRTPIGYQPPKF 329
           Q   LYSKPYTKRIDNLR P GYQPPKF
Sbjct: 184 QTFSLYSKPYTKRIDNLRMPNGYQPPKF 211

[Close]

BLAST of Lag0007695 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 9.3e-35
Identity = 79/135 (58.52%), Postives = 104/135 (77.04%), Query Frame = 0


Query: 194 PDSDVVTVMMTETKTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQ 253
           P  ++++VM+T+  T E+RM E+++ +N LMKA+EE+D +I  LK+ IE++  AESS T 
Sbjct: 77  PQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALLKNHIESRDAAESSHTH 136

Query: 254 VIKNHDKGKIIVQDDQPQCSASVASLSIQQLQDMITNYIRAQYGGPTQDSLLYSKPYTKR 313
            IKN +KGK I+Q+ QPQ S S+ASLS+QQLQ+MI N I+ QYGGP Q   LYSKPYTKR
Sbjct: 137 TIKNANKGKAIMQESQPQNSTSIASLSVQQLQEMIANSIKTQYGGPAQTFSLYSKPYTKR 196

Query: 314 IDNLRTPIGYQPPKF 329
           IDN+R P GYQPPKF
Sbjct: 197 IDNMRMPHGYQPPKF 211

[Close]

BLAST of Lag0007695 vs. ExPASy TrEMBL
Match: A0A5D3BY32 (Retrotransposon protein putative ty3-gypsy sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1871G00100 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-34
Identity = 81/160 (50.62%), Postives = 112/160 (70.00%), Query Frame = 0


Query: 182 DKFLVKYNPLFE-------------PDSDVVTVMMTETKTMEERMTEMQEHINNLMKAIE 241
           D  ++K NP  +             P  ++++VM+T+  T E+RM E+++ +N LMKA+E
Sbjct: 52  DGIIIKENPAIDEHNSLSDRSNEEAPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVE 111

Query: 242 EKDSQIEQLKSQIENQHIAESSQTQVIKNHDKGKIIVQDDQPQCSASVASLSIQQLQDMI 301
           E+D +I  LK+ I+++  AESS T+ IKN +KGK+I+Q+ QPQ S S+ASLS+QQLQ+MI
Sbjct: 112 ERDFEIALLKNHIKSRDAAESSHTRTIKNVNKGKVIMQESQPQNSTSIASLSVQQLQEMI 171

Query: 302 TNYIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQPPKF 329
            N I+ QYGGP Q   LYSKPY KRIDN+R P GYQPPKF
Sbjct: 172 ANSIKTQYGGPAQTFFLYSKPYMKRIDNMRMPHGYQPPKF 211

[Close]

BLAST of Lag0007695 vs. ExPASy TrEMBL
Match: A0A5A7U9H0 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001980 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.7e-34
Identity = 78/135 (57.78%), Postives = 103/135 (76.30%), Query Frame = 0


Query: 194 PDSDVVTVMMTETKTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQ 253
           P  ++++VM+T+  T E+RM E+++ +N LMKA+EE+D +I  LK+ IE++   ESS T 
Sbjct: 77  PQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIASLKNHIESRDAIESSHTH 136

Query: 254 VIKNHDKGKIIVQDDQPQCSASVASLSIQQLQDMITNYIRAQYGGPTQDSLLYSKPYTKR 313
           +IKN +KGK I+Q+ QPQ S S+ASLS+QQL +MI N I+ QYGGP Q   LYSKPYTKR
Sbjct: 137 IIKNVNKGKAIMQESQPQNSTSIASLSVQQLHEMIANSIKTQYGGPAQTFSLYSKPYTKR 196

Query: 314 IDNLRTPIGYQPPKF 329
           IDNLR P GYQPPKF
Sbjct: 197 IDNLRMPNGYQPPKF 211

The following BLAST results are available for this feature:

BLAST of Lag0007695 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742199.1	8.7e-35	57.32	uncharacterized protein LOC105435721 [Cucumis sativus]	[more]
XP_031735972.1	8.7e-35	57.32	uncharacterized protein LOC116401693 [Cucumis sativus]	[more]
KAA0050518.1	8.7e-35	59.26	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0034095.1	1.1e-34	56.08	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0047477.1	1.9e-34	58.52	uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]	[more]

BLAST of Lag0007695 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0007695 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U5H1	4.2e-35	59.26	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7SY17	5.5e-35	56.08	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7TZU9	9.3e-35	58.52	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]
A0A5D3BY32	1.6e-34	50.63	Retrotransposon protein putative ty3-gypsy sub-class OS=Cucumis melo var. makuwa...	[more]
A0A5A7U9H0	2.7e-34	57.78	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Lag0007695 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 206..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0007695.1	Lag0007695.1	mRNA