Lag0007588 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCAATCGAAGGACCCATTTGAAGCGGCATTTGAGGAGCAGGAAGAGTCACCACCGAACTCCCCTTCTGCGGCCGATGATCTCGAAATTCAGACCAATGCAGCCACAGCCACCGCCACCACCTCCAATGTTCTTGATTTGCATGACAGTGATGCTGATCCAAAACCTGCCGCTGCCACCACACATTCCAACATCCCTTCTGCATCCACCACTTCTATGATCGTTTCCTCTTCCTCCAATGTCTCTGCAGCCCCAAAAACCAAAGAAGACGACGAGGAAGAAGAGGAAGAGAATGTGGAAGTTGAGCTCGCCAAATTCCCCGCAAGCGGTGATCCAGATAAGATGGCGAAGATGCAGTATGTTTTCTTGGCTCTCTCAATATATAGGTTTAATTTTTGTTTTCAATTGATTTTTCTGCTTTAGGTTACACTAGTTTAGTCTCAATGTTATCGTTAAAAGATTCTTCCTCTGTCACGAATATGATAATTCTTAGGTTAATTTATAATTCTCAGCATTGTGTGTGTTTGTGAAACGTTTCTATTGAACTTATATTTGATCGATGATGTGAAATATTACCTAAAGGGTGAAGAGTCAAAACTGATACTGAGGAAAATCTTATCTTAAGCCTTTCTATTCACCAAAAGATTATTTAGATTGTAATTTGTCGAGTGGATAACATTTACACCAAGAGAGAGCCATAATAAAAATAGAATCCAAGAGTCTATCAAAAGAAAATGAGATTGTTCCTTTTCAAACCAAATAATCAAAAGAAAGCTCTATTGGCTTGTAGCCAAAGATGGCAAATCAACATCATGTTGTTGGGAAGAACCACAATCTGGTTCAAGGAATTTAGAAACGTGGACCAATATTTGTTTGAAAGGGGCATTGTGAAAGAATGATGACGTTGTGTCCTATCACTCACTACTATCAGTTGATGGAATGCTGACATCAAGCACTCCAATAGATAAAATTTGTTAAGTAGTAATTTTCTTTTTTTGCAACTTTATGTCAGTAGATTGCATCAGTAACCAGTTCTTGCAAAATGGAGGATCAATGCCCTTAGACTTCTATGGAATAAGATAGATCATTAGTAGGAACTAGATACCTCCTTTATAGGAAGAGCCAACACTGGTCAGATGTTTTCTCAGCTTGCTAATGATGTTAAAAATGTTTGTAGCATGTGGTCCTTTGGTCAGGAAATCATCAGTTGATTGATATGAATAGAATGTGAACTTGTTCATTATTAAGTTTCTCCTATAGAATATTGAGAATTTTTACAATTCACGAATTCCCAATGTCCTTGCCAAAAATTTTGCTTTTGAACCTAGTATAGCTATTGCATGTTGCTTCCTGCTCTTCCAAATTACGAGGTGTTCCCATTAATAATAGTGCAATAGCCTTATGTTGGTTTTCTTCATCAAGAGATCCATAAGGATTTGCTCCTAAGATAACCAGGTATAAGGAAAGCACAAACTATGGATAAAAATCTTTGGACCATGAGAGAGAGATTCATTGAGAAACTGCTATGAACTTATACTAACTCCAAGACTTGCTCAGCTATTCCTGTATATTATGCTGAACACATTATGTAGTCAATTTGTATCTTGTTCAATCACGACTTCCAAGGAACTCCTTTTTTTAACTTTTGCTACAAATGGCAACTTAAACAAGTTGAAAATGGTGGAAGATGTGGCCAGTAATCAACGGTCCTTCAAAACCACCCTTTATTTAATTTTGATTTTAATTTCTCAATTAGTAGAAACTTATATTCAGTTTTTATGCCCAACATCCATTAAAGGCCTAATTTTGAACAAAAGGATGAAAAGGAAAGACTACTATTTGTCCTCAAGCTAAAATTCATGAATATTCATCCCATGGTTTGATATTTAGACCATCCTTTTCAGCGGAGTTGTACATTACTTATTTGGCGGTGGAATATATTTCATTTTTATTTAAATTTGAGGTAGGAACTCGGTTTTTTATTCATGACAATTGGGACTGTGTAACTAAATCCGTTTAGCTTCTAGTGTATTTTTGTTTCTTCCTGTTTCTCTTGTACTTTCATAAATCTTGTCTTGGATGATAACCCAATACACTCTCCGAGTTTCATCTTTTATAATGTAAATTCTTCTTTTAAATTGGAAAAAAATGGATGCTTTTTTTTTTTTCATTGCTCCAAGAGAGTTGGTTGAAAAAGAATGTATTTTTTAAGATTAACTTGAGATCATTTTTGTTACTCAGGATGCTTGTTTTGGTTTCTTTATTAAACTTTAAATACAGTATTATAAAATCTTCACTATAGAAAGAATCTTGTTGTAACTTGTCTTTACATTTGATCAGAGCCATTCTCTCACAATTTACAGAAGAACAGATGAGTCGTTATGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGGTATGAATCTTAATATTTTCTCGTAGTGAAAGACATTAGAGATGGCAATGAAGGGTGGGAAAATCTTTACAAACATGAACTCAGTTCATCTTGTTGCCATTGTCTTGTAAATCATAGCTATTAGCAAGCATCTCAGGAACACAGAAAATTTCTGTACCGATGACGATTGTAGTGTCTGGGATCGCAAAGATGTTCGTTGGTGAACTCGTAGAAATGGGTATGTGTAAACTTCTTCTCTAAAACCCGTCGTAGAAATGGGTGTGTAAACTTCTTCTCTAAAACCCAATTCAGTGTTCATGTAGGACTCAAAAGTTGCTTTTCTTTTTCTTCTGTTCAGTTACTTTTAATAGCAATGTGAAGCATAGACAAAAGAATCTGCATAATCCAAAACGACATCGACTCATTCCAATACGCTTGTTTTGTTTCAGCAAGAGTTGTTATGACGGAGCGGAATGATTCTGGACCTATCAGGCCGTGTCATCTCCGAGAAGCATATAGAAGACTAAAGCTTGAAGGTAAGGTTCCAAGGAAATCAGTGCCTAGGCTCTTTCGCTAA ATGAAGCAATCGAAGGACCCATTTGAAGCGGCATTTGAGGAGCAGGAAGAGTCACCACCGAACTCCCCTTCTGCGGCCGATGATCTCGAAATTCAGACCAATGCAGCCACAGCCACCGCCACCACCTCCAATGTTCTTGATTTGCATGACAGTGATGCTGATCCAAAACCTGCCGCTGCCACCACACATTCCAACATCCCTTCTGCATCCACCACTTCTATGATCGTTTCCTCTTCCTCCAATGTCTCTGCAGCCCCAAAAACCAAAGAAGACGACGAGGAAGAAGAGGAAGAGAATGTGGAAGTTGAGCTCGCCAAATTCCCCGCAAGCGGTGATCCAGATAAGATGGCGAAGATGCAAGCCATTCTCTCACAATTTACAGAAGAACAGATGAGTCGTTATGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTATTAGCAAGCATCTCAGGAACACAGAAAATTTCTGTACCGATGACGATTGTAGTGTCTGGGATCGCAAAGATGTTCGTTGGTGAACTCGTAGAAATGGCAAGAGTTGTTATGACGGAGCGGAATGATTCTGGACCTATCAGGCCGTGTCATCTCCGAGAAGCATATAGAAGACTAAAGCTTGAAGGTAAGGTTCCAAGGAAATCAGTGCCTAGGCTCTTTCGCTAA ATGAAGCAATCGAAGGACCCATTTGAAGCGGCATTTGAGGAGCAGGAAGAGTCACCACCGAACTCCCCTTCTGCGGCCGATGATCTCGAAATTCAGACCAATGCAGCCACAGCCACCGCCACCACCTCCAATGTTCTTGATTTGCATGACAGTGATGCTGATCCAAAACCTGCCGCTGCCACCACACATTCCAACATCCCTTCTGCATCCACCACTTCTATGATCGTTTCCTCTTCCTCCAATGTCTCTGCAGCCCCAAAAACCAAAGAAGACGACGAGGAAGAAGAGGAAGAGAATGTGGAAGTTGAGCTCGCCAAATTCCCCGCAAGCGGTGATCCAGATAAGATGGCGAAGATGCAAGCCATTCTCTCACAATTTACAGAAGAACAGATGAGTCGTTATGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTATTAGCAAGCATCTCAGGAACACAGAAAATTTCTGTACCGATGACGATTGTAGTGTCTGGGATCGCAAAGATGTTCGTTGGTGAACTCGTAGAAATGGCAAGAGTTGTTATGACGGAGCGGAATGATTCTGGACCTATCAGGCCGTGTCATCTCCGAGAAGCATATAGAAGACTAAAGCTTGAAGGTAAGGTTCCAAGGAAATCAGTGCCTAGGCTCTTTCGCTAA MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAATATATTSNVLDLHDSDADPKPAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPASGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPCHLREAYRRLKLEGKVPRKSVPRLFR Homology
BLAST of Lag0007588 vs. NCBI nr
Match: KAG7028341.1 (Transcription initiation factor TFIID subunit 11 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 357.8 bits (917), Expect = 6.6e-95 Identity = 204/226 (90.27%), Postives = 211/226 (93.36%), Query Frame = 0
BLAST of Lag0007588 vs. NCBI nr
Match: XP_023005534.1 (transcription initiation factor TFIID subunit 11 [Cucurbita maxima]) HSP 1 Score: 357.5 bits (916), Expect = 8.7e-95 Identity = 202/227 (88.99%), Postives = 211/227 (92.95%), Query Frame = 0
BLAST of Lag0007588 vs. NCBI nr
Match: XP_023538856.1 (transcription initiation factor TFIID subunit 11 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 357.1 bits (915), Expect = 1.1e-94 Identity = 204/228 (89.47%), Postives = 211/228 (92.54%), Query Frame = 0
BLAST of Lag0007588 vs. NCBI nr
Match: XP_022940909.1 (transcription initiation factor TFIID subunit 11 [Cucurbita moschata]) HSP 1 Score: 355.9 bits (912), Expect = 2.5e-94 Identity = 200/225 (88.89%), Postives = 208/225 (92.44%), Query Frame = 0
BLAST of Lag0007588 vs. NCBI nr
Match: KAG6596814.1 (Transcription initiation factor TFIID subunit 11, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 355.9 bits (912), Expect = 2.5e-94 Identity = 203/226 (89.82%), Postives = 210/226 (92.92%), Query Frame = 0
BLAST of Lag0007588 vs. ExPASy Swiss-Prot
Match: Q9M565 (Transcription initiation factor TFIID subunit 11 OS=Arabidopsis thaliana OX=3702 GN=TAF11 PE=1 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 5.9e-54 Identity = 129/232 (55.60%), Postives = 158/232 (68.10%), Query Frame = 0
BLAST of Lag0007588 vs. ExPASy Swiss-Prot
Match: F4HR03 (Transcription initiation factor TFIID subunit 11b OS=Arabidopsis thaliana OX=3702 GN=TAF11B PE=2 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 5.0e-37 Identity = 106/225 (47.11%), Postives = 125/225 (55.56%), Query Frame = 0
BLAST of Lag0007588 vs. ExPASy Swiss-Prot
Match: Q99JX1 (Transcription initiation factor TFIID subunit 11 OS=Mus musculus OX=10090 GN=Taf11 PE=1 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 7.3e-20 Identity = 70/170 (41.18%), Postives = 107/170 (62.94%), Query Frame = 0
BLAST of Lag0007588 vs. ExPASy Swiss-Prot
Match: Q5RA91 (Transcription initiation factor TFIID subunit 11 OS=Pongo abelii OX=9601 GN=TAF11 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.2e-19 Identity = 73/169 (43.20%), Postives = 105/169 (62.13%), Query Frame = 0
BLAST of Lag0007588 vs. ExPASy Swiss-Prot
Match: Q15544 (Transcription initiation factor TFIID subunit 11 OS=Homo sapiens OX=9606 GN=TAF11 PE=1 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 4.7e-19 Identity = 72/169 (42.60%), Postives = 104/169 (61.54%), Query Frame = 0
BLAST of Lag0007588 vs. ExPASy TrEMBL
Match: A0A6J1KZI1 (transcription initiation factor TFIID subunit 11 OS=Cucurbita maxima OX=3661 GN=LOC111498496 PE=3 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 4.2e-95 Identity = 202/227 (88.99%), Postives = 211/227 (92.95%), Query Frame = 0
BLAST of Lag0007588 vs. ExPASy TrEMBL
Match: A0A6J1FLN4 (transcription initiation factor TFIID subunit 11 OS=Cucurbita moschata OX=3662 GN=LOC111446328 PE=3 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94 Identity = 200/225 (88.89%), Postives = 208/225 (92.44%), Query Frame = 0
BLAST of Lag0007588 vs. ExPASy TrEMBL
Match: A0A6J1DFN0 (transcription initiation factor TFIID subunit 11 OS=Momordica charantia OX=3673 GN=LOC111020384 PE=3 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 1.4e-93 Identity = 199/229 (86.90%), Postives = 205/229 (89.52%), Query Frame = 0
BLAST of Lag0007588 vs. ExPASy TrEMBL
Match: A0A5D3D798 (Transcription initiation factor TFIID subunit 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001040 PE=3 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 5.7e-92 Identity = 196/224 (87.50%), Postives = 201/224 (89.73%), Query Frame = 0
BLAST of Lag0007588 vs. ExPASy TrEMBL
Match: A0A0A0L5S4 (TAFII28 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G038160 PE=3 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 9.7e-92 Identity = 195/224 (87.05%), Postives = 202/224 (90.18%), Query Frame = 0
BLAST of Lag0007588 vs. TAIR 10
Match: AT4G20280.1 (TBP-associated factor 11 ) HSP 1 Score: 212.2 bits (539), Expect = 4.2e-55 Identity = 129/232 (55.60%), Postives = 158/232 (68.10%), Query Frame = 0
BLAST of Lag0007588 vs. TAIR 10
Match: AT1G20000.1 (TBP-associated factor 11B ) HSP 1 Score: 156.0 bits (393), Expect = 3.6e-38 Identity = 106/225 (47.11%), Postives = 125/225 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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