Lag0007551 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0007551
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Flavin-containing monooxygenase
Location	chr9: 946398 .. 947005 (+)
RNA-Seq Expression	Lag0007551
Synteny	Lag0007551

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCCATTGGAGCTAAAAAACGAGATGGGAAAAACCTCTGTTCTAGACATTGGAGCAATGGAGAAAATCAAATCCGGTGACATCAAAGTAGTCTCTGGAATCAAACGGTTCACTCGCAACCAAGTAGAGCTCGTCAACGGCGAAAAGCTCGATGTAGATTCAGTAGTTTTGGCTACTGGGTACCGCAGCAACGTCCCTTCTTCGCTTCAGGTGAGGCAAATATTCAATTTAAACCCAAGTTTCTCTCACAGTAATTTAGTCGAACACATGGCAGACAAAAAAAAAAAAACTGACCACCATTCTCAAACATGACTAACCTTAAATTTTTCATTGAAATGAACAGGAAGGCGAATTCTTCTCCAAAAACTTATTCCCAAAAGCAGCATCACCACATGGGTGGAAGGGAAATACGAGACTTTACGCAGTTGGGTTCTCGAGAAGAGGACTATGAACGCCATGAAAATAGCTCAAGACATTGGCACCGTTTGGAAGGCGTTGACGAAGCGACAGAAGAAGAAAACCACCGCTTGCCACAGACGTTGCATTTCCCAGTTCTGATAATTGCCACCATTGATGATTTTAGCCAAGATTTCTTGGCAGTGTAA

mRNA sequence

ATGGGGCCATTGGAGCTAAAAAACGAGATGGGAAAAACCTCTGTTCTAGACATTGGAGCAATGGAGAAAATCAAATCCGGTGACATCAAAGTAGTCTCTGGAATCAAACGGTTCACTCGCAACCAAGTAGAGCTCGTCAACGGCGAAAAGCTCGATGTAGATTCAGTAGTTTTGGCTACTGGGTACCGCAGCAACGTCCCTTCTTCGCTTCAGGCGAATTCTTCTCCAAAAACTTATTCCCAAAAGCAGCATCACCACATGGGTGGAAGGGAAATACGAGACTTTACGCAGTTGGGTTCTCGAGAAGAGGACTATGAACGCCATGAAAATAGCTCAAGACATTGGCACCGTTTGGAAGGCGTTGACGAAGCGACAGAAGAAGAAAACCACCGCTTGCCACAGACGTTGCATTTCCCAGTTCTGATAATTGCCACCATTGATGATTTTAGCCAAGATTTCTTGGCAGTGTAA

Coding sequence (CDS)

ATGGGGCCATTGGAGCTAAAAAACGAGATGGGAAAAACCTCTGTTCTAGACATTGGAGCAATGGAGAAAATCAAATCCGGTGACATCAAAGTAGTCTCTGGAATCAAACGGTTCACTCGCAACCAAGTAGAGCTCGTCAACGGCGAAAAGCTCGATGTAGATTCAGTAGTTTTGGCTACTGGGTACCGCAGCAACGTCCCTTCTTCGCTTCAGGCGAATTCTTCTCCAAAAACTTATTCCCAAAAGCAGCATCACCACATGGGTGGAAGGGAAATACGAGACTTTACGCAGTTGGGTTCTCGAGAAGAGGACTATGAACGCCATGAAAATAGCTCAAGACATTGGCACCGTTTGGAAGGCGTTGACGAAGCGACAGAAGAAGAAAACCACCGCTTGCCACAGACGTTGCATTTCCCAGTTCTGATAATTGCCACCATTGATGATTTTAGCCAAGATTTCTTGGCAGTGTAA

Protein sequence

MGPLELKNEMGKTSVLDIGAMEKIKSGDIKVVSGIKRFTRNQVELVNGEKLDVDSVVLATGYRSNVPSSLQANSSPKTYSQKQHHHMGGREIRDFTQLGSREEDYERHENSSRHWHRLEGVDEATEEENHRLPQTLHFPVLIIATIDDFSQDFLAV

Homology

[Close]

BLAST of Lag0007551 vs. NCBI nr
Match: NP_001306246.1 (probable indole-3-pyruvate monooxygenase YUCCA8 [Cucumis melo] >AJO67753.1 YUCCA type protein 8 [Cucumis melo] >KAA0039902.1 putative indole-3-pyruvate monooxygenase YUCCA8 [Cucumis melo var. makuwa] >TYK24598.1 putative indole-3-pyruvate monooxygenase YUCCA8 [Cucumis melo var. makuwa])

HSP 1 Score: 129.0 bits (323), Expect = 3.5e-26
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1   MGPLELKNEMGKTSVLDIGAMEKIKSGDIKVVSGIKRFTRNQVELVNGEKLDVDSVVLAT 60
           MGPLELKNE+GKT VLDIGA+EKIKSGDIKVV GIKRFTRNQVELVNGEKLDVDSVVLAT
Sbjct: 278 MGPLELKNEIGKTPVLDIGALEKIKSGDIKVVPGIKRFTRNQVELVNGEKLDVDSVVLAT 337

Query: 61  GYRSNVPSSLQ 72
           GYRSNVPS LQ
Sbjct: 338 GYRSNVPSWLQ 348

[Close]

BLAST of Lag0007551 vs. NCBI nr
Match: XP_038907050.1 (probable indole-3-pyruvate monooxygenase YUCCA8 [Benincasa hispida])

HSP 1 Score: 129.0 bits (323), Expect = 3.5e-26
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1   MGPLELKNEMGKTSVLDIGAMEKIKSGDIKVVSGIKRFTRNQVELVNGEKLDVDSVVLAT 60
           MGPLELKNE+GKT VLDIGA+EKIKSGDIKVV GIKRFTRNQVELVNGEKLDVDSVVLAT
Sbjct: 278 MGPLELKNEIGKTPVLDIGALEKIKSGDIKVVPGIKRFTRNQVELVNGEKLDVDSVVLAT 337

Query: 61  GYRSNVPSSLQ 72
           GYRSNVPS LQ
Sbjct: 338 GYRSNVPSWLQ 348

[Close]

BLAST of Lag0007551 vs. NCBI nr
Match: XP_022157485.1 (probable indole-3-pyruvate monooxygenase YUCCA8 [Momordica charantia])

HSP 1 Score: 128.3 bits (321), Expect = 6.0e-26
Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1   MGPLELKNEMGKTSVLDIGAMEKIKSGDIKVVSGIKRFTRNQVELVNGEKLDVDSVVLAT 60
           MGPLELKNE GKT VLDIGA+EKIKSGDIKVV GIKRFTRNQVELVNGEKLDVDSVVLAT
Sbjct: 278 MGPLELKNETGKTPVLDIGALEKIKSGDIKVVPGIKRFTRNQVELVNGEKLDVDSVVLAT 337

Query: 61  GYRSNVPSSLQ 72
           GYRSNVPS LQ
Sbjct: 338 GYRSNVPSWLQ 348

[Close]

BLAST of Lag0007551 vs. NCBI nr
Match: XP_004140585.1 (probable indole-3-pyruvate monooxygenase YUCCA8 [Cucumis sativus] >KAE8646735.1 hypothetical protein Csa_005061 [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 7.8e-26
Identity = 65/71 (91.55%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1   MGPLELKNEMGKTSVLDIGAMEKIKSGDIKVVSGIKRFTRNQVELVNGEKLDVDSVVLAT 60
           MGPLELKNE+GKT VLDIGA+EKIKSGDIKVV GIKRFTRNQVELVNG+KLDVDSVVLAT
Sbjct: 278 MGPLELKNEIGKTPVLDIGALEKIKSGDIKVVPGIKRFTRNQVELVNGQKLDVDSVVLAT 337

Query: 61  GYRSNVPSSLQ 72
           GYRSNVPS LQ
Sbjct: 338 GYRSNVPSWLQ 348

[Close]

BLAST of Lag0007551 vs. NCBI nr
Match: KAG6576071.1 (putative indole-3-pyruvate monooxygenase YUCCA8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014588.1 putative indole-3-pyruvate monooxygenase YUCCA8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 125.2 bits (313), Expect = 5.0e-25
Identity = 64/71 (90.14%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1   MGPLELKNEMGKTSVLDIGAMEKIKSGDIKVVSGIKRFTRNQVELVNGEKLDVDSVVLAT 60
           MGPL+LKN +GKT VLDIGA+EKIKSGDIKVV GIKRFTRNQVELVNGEKLDVDSVVLAT
Sbjct: 278 MGPLQLKNVVGKTPVLDIGALEKIKSGDIKVVPGIKRFTRNQVELVNGEKLDVDSVVLAT 337

Query: 61  GYRSNVPSSLQ 72
           GYRSNVPS LQ
Sbjct: 338 GYRSNVPSWLQ 348

[Close]

BLAST of Lag0007551 vs. ExPASy Swiss-Prot
Match: Q9LKC0 (Probable indole-3-pyruvate monooxygenase YUCCA5 OS=Arabidopsis thaliana OX=3702 GN=YUC5 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.4e-23
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 0


Query: 1   MGPLELKNEMGKTSVLDIGAMEKIKSGDIKVVSGIKRFTRNQVELVNGEKLDVDSVVLAT 60
           MGP+ELK   GKT VLDIGAMEKIKSG++++V GIKRF+R+ VELV+G++LD+D+VVLAT
Sbjct: 279 MGPMELKIVSGKTPVLDIGAMEKIKSGEVEIVPGIKRFSRSHVELVDGQRLDLDAVVLAT 338

Query: 61  GYRSNVPSSLQAN 74
           GYRSNVPS LQ N
Sbjct: 339 GYRSNVPSWLQEN 351

[Close]

BLAST of Lag0007551 vs. ExPASy Swiss-Prot
Match: Q9SVU0 (Probable indole-3-pyruvate monooxygenase YUCCA8 OS=Arabidopsis thaliana OX=3702 GN=YUC8 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.2e-22
Identity = 55/73 (75.34%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 1   MGPLELKNEMGKTSVLDIGAMEKIKSGDIKVVSGIKRFTRNQVELVNGEKLDVDSVVLAT 60
           MGP+ELK+  GKT VLDIGA+EKI+ G I VV GIKRF  N+VELVNGE+LDVDSVVLAT
Sbjct: 279 MGPMELKSVKGKTPVLDIGAIEKIRLGKINVVPGIKRFNGNKVELVNGEQLDVDSVVLAT 338

Query: 61  GYRSNVPSSLQAN 74
           GYRSNVP  LQ N
Sbjct: 339 GYRSNVPYWLQEN 351

[Close]

BLAST of Lag0007551 vs. ExPASy Swiss-Prot
Match: O64489 (Probable indole-3-pyruvate monooxygenase YUCCA9 OS=Arabidopsis thaliana OX=3702 GN=YUC9 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-21
Identity = 57/105 (54.29%), Postives = 73/105 (69.52%), Query Frame = 0


Query: 1   MGPLELKNEMGKTSVLDIGAMEKIKSGDIKVVSGIKRFTRNQVELVNGEKLDVDSVVLAT 60
           +GP+ELK+  GKT VLDIGA+EKIKSGD+++V  IK+F+R+ VELV+G+KLD+D+VVLAT
Sbjct: 276 IGPMELKSMTGKTPVLDIGALEKIKSGDVEIVPAIKQFSRHHVELVDGQKLDIDAVVLAT 335

Query: 61  GYRSNVPSSLQ------ANSSPKTYSQKQHHHMGGREIRDFTQLG 100
           GYRSNVPS LQ       N  PK+          G     FT+ G
Sbjct: 336 GYRSNVPSWLQESEFFSKNGFPKSPFPNAWKGKSGLYAAGFTRKG 380

[Close]

BLAST of Lag0007551 vs. ExPASy Swiss-Prot
Match: O23024 (Probable indole-3-pyruvate monooxygenase YUCCA3 OS=Arabidopsis thaliana OX=3702 GN=YUC3 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-19
Identity = 47/73 (64.38%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 1   MGPLELKNEMGKTSVLDIGAMEKIKSGDIKVVSGIKRFTRNQVELVNGEKLDVDSVVLAT 60
           +GPLELKN+ GKT VLDIGA+ KI+SG IK+V GI +F + +VEL++G  L++DSV+LAT
Sbjct: 292 IGPLELKNKEGKTPVLDIGALPKIRSGKIKIVPGIIKFGKGKVELIDGRVLEIDSVILAT 351

Query: 61  GYRSNVPSSLQAN 74
           GYRSNVPS L+ N
Sbjct: 352 GYRSNVPSWLKDN 364

[Close]

BLAST of Lag0007551 vs. ExPASy Swiss-Prot
Match: O49312 (Probable indole-3-pyruvate monooxygenase YUCCA7 OS=Arabidopsis thaliana OX=3702 GN=YUC7 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.6e-19
Identity = 48/73 (65.75%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1   MGPLELKNEMGKTSVLDIGAMEKIKSGDIKVVSGIKRFTRNQVELVNGEKLDVDSVVLAT 60
           +GPLELKN  GKT VLDIGA+  IKSG IK+V+GI +F   +VELV+G  L +DSV+LAT
Sbjct: 287 IGPLELKNTAGKTPVLDIGAISMIKSGKIKIVAGIAKFGPGKVELVDGRVLQIDSVILAT 346

Query: 61  GYRSNVPSSLQAN 74
           GYRSNVPS L+ N
Sbjct: 347 GYRSNVPSWLKEN 359

The following BLAST results are available for this feature:

BLAST of Lag0007551 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001306246.1	3.5e-26	92.96	probable indole-3-pyruvate monooxygenase YUCCA8 [Cucumis melo] >AJO67753.1 YUCCA...	[more]
XP_038907050.1	3.5e-26	92.96	probable indole-3-pyruvate monooxygenase YUCCA8 [Benincasa hispida]	[more]
XP_022157485.1	6.0e-26	92.96	probable indole-3-pyruvate monooxygenase YUCCA8 [Momordica charantia]	[more]
XP_004140585.1	7.8e-26	91.55	probable indole-3-pyruvate monooxygenase YUCCA8 [Cucumis sativus] >KAE8646735.1 ...	[more]
KAG6576071.1	5.0e-25	90.14	putative indole-3-pyruvate monooxygenase YUCCA8, partial [Cucurbita argyrosperma...	[more]

BLAST of Lag0007551 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LKC0	6.4e-23	72.60	Probable indole-3-pyruvate monooxygenase YUCCA5 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SVU0	3.2e-22	75.34	Probable indole-3-pyruvate monooxygenase YUCCA8 OS=Arabidopsis thaliana OX=3702 ...	[more]
O64489	2.1e-21	54.29	Probable indole-3-pyruvate monooxygenase YUCCA9 OS=Arabidopsis thaliana OX=3702 ...	[more]
O23024	1.9e-19	64.38	Probable indole-3-pyruvate monooxygenase YUCCA3 OS=Arabidopsis thaliana OX=3702 ...	[more]
O49312	5.6e-19	65.75	Probable indole-3-pyruvate monooxygenase YUCCA7 OS=Arabidopsis thaliana OX=3702 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 4..103 e-value: 5.0E-8 score: 34.6
IPR036188	FAD/NAD(P)-binding domain superfamily	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 12..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..82
None	No IPR available	PANTHER	PTHR43539:SF49	INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED	coord: 1..73
None	No IPR available	PANTHER	PTHR43539	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0007551.1	Lag0007551.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0050661	NADP binding
molecular_function	GO:0004499	N,N-dimethylaniline monooxygenase activity