Lag0007522 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACATCCCTAATACTGCTGCCATTGATGATATGAAGCAGAAATTAACAAGTAAGTTTGAGATGAAAGATTTAGGACATACTCGACAGATTTGGGGCATTTACATTATATGAAACCGAAAGCTGGGAGCATTGAAGCTATCTGAACAAGACTATTGTTTGAAAATGCTTAAAAGGTTTGACATGTCTACTTGTAAACCTGTAAATGTTTCAATTGCTAATCATTTTAAGCTTTCAAGGCAAGATTCACCCCAAACTACTGAAGAAAAGCAACAAATGGAAGCCATACCATATGCAAATGTCATGGGAAGTCTTATGTACCTTATGGGTTGTACACGACCAGACTTGGCACATCGGCTGAGTGTAGTAAGTAGGTACATGGAAAATCCTGGGAAAACTCATTGGATGGCAATGAAATGGCTATTGAGATATGTTAAAGGAACGGTGTCATATGGTCTGCTTTATAATGTTGTTTCTTCACAGGAAACAGAGGTGGTTAGCTATGTGGATGCGGATTATGCAACTGATCTTGATAGAATAAGGTCTTTCACAGGTTTGTCTTTCACTTATTTGGTAATACAGTAAGTTGGAAGTCATCACTTCAATCTGTAGTTGCTTTTATCAACAATTGAGTCTGAATATATGGTTGTAACTGAGGCATTTAAAGAGGTTTTGTGGTTGCTTGAATTGTGTGAAGAATTAGGGGAAAGTCTTAAAGATCAGTTGGTTATTTTAATTTCTGTGACAGTAAAAGTGCAGTCTTTTTGTCTAAAAACCAAACTTTCCATGAAAGAACAAAGCACATCGATGTGAGGTATCATTTCATTAGAGATATAATTGCTGAAGGAAATGTGAGACTTGAAAAGATTGCATCTTGTGATAATGCAGCTGATGCATTGATTAAAATGTTACCTCTAGGCAAGTTTGAAAGTTGCCTTAAAACTCTCAATATTGGTCCTAAGTAATTGTTTGATTTAGAGGCACTACATTTATAGAATCTGAGCTGTTTTTGGTGGATATGCTGTCAAGGTGTATAATTGTTGGAATATTTGTCGGCATTTATTGCTTATTCTATGTATTCCATTATAATAAGTTGTTTGTCTTATTTGTTATTAGCCCATCTGCAATGTTTATCTCGTCGGGTGATTTTTTTTTCTACTAAGTACTGTTGGGGGAAATTACAAATAACAGAGGAAATGGAGAAAATATTGAGAAAACAGACACGTAAACAATTAGGTTGAGGCGCGGGTATCTCGCTCTCTTTAAGGAGATTCAAGCCCTCTGCGGTGTATAATTCTTTATCAATCACCGGTGCAGCAGGTATTCTCAAGCCTGTCCCCTCCAGGATACAACAACCCAACTGAAACGTTGTGTAGCTCAAACCACTCTGTACTAAGAGGTTGAGCTCAAAGCTCCACAACAAAGAACACCCCTCTTTTGGCCAATTGCTCTTGAAAGAGCAAATGAGAGAAATATGAGAAAGTAGAAAGAAGATAAGATTGAAATTGTTGTATTTCTTGTTATATGGAAAGTGTTTGGTGTGAGAGGTATTTATAGGATTTTCTAGATCTATAAATTTAATACAAAACAAAAGTAACCAGAATAAAACTCTCCTACCCAATACGTTTTTCTCTTTTAAAATGGGAGAAAACTCTCCAAAATTAATAACTCATATTTAAAATACAATTAAATATTAAAATGTTACAACAAGTACAATCAACATATTTGTACAGCATGATGTCTAAGTGTACAAGGGTTGCCAATTCATGTCTGATTTGGGCCACATGGTTAGTTGCACATTTCTGTTACGAGGGCAGCAGAGATTCAGTTATACCCTCCATCAGCTAACGTATGCAAATGTAGAGAAAAGGGTTTTATTCATTCCTCTCATTCGATTGAAGGTAGATGGAGCTGAGAGTGAGAGTCCATAATCTTAAACAATGTGAGAGTGTTGCTGAGTAGAGCTAGCCTTCTAGGAGTGAAGCTTGTTGCTCCGTTTTTTGCATTTGAAGCATTTGTTATTGATCTCTTGGAGAGAGGTGCTGAAGCTCTCTCTTTTACTCAGGAGGGCGTTCCAGTCTATGTTCTGTGGTGTGTGGAATTGAAATATTAG ATGAACATCCCTAATACTGCTGCCATTGATGATATGAAGCAGAAATTAACAACATTGAAGCTATCTGAACAAGACTATTGTTTGAAAATGCTTAAAAGGTTTGACATGTCTACTTGTAAACCTGTAAATGTTTCAATTGCTAATCATTTTAAGCTTTCAAGGCAAGATTCACCCCAAACTACTGAAGAAAAGCAACAAATGGAAGCCATACCATATGCAAATGTCATGGGAAGTCTTATGTACCTTATGGGTTGTACACGACCAGACTTGGCACATCGGCTGAGTGTAGTAAGTAGGTACATGGAAAATCCTGGGAAAACTCATTGGATGGCAATGAAATGGCTATTGAGATATGTTAAAGGAACGGTGTCATATGGTCTGCTTTATAATGTTGTTTCTTCACAGGAAACAGAGGTGGTTAGCTATGTGGATGCGGATTATGCAACTGATCTTGATAGAATAAGGTCTTTCACAGTCTTTTTGTCTAAAAACCAAACTTTCCATGAAAGAACAAAGCACATCGATGTGAGGTATCATTTCATTAGAGATATAATTGCTGAAGGAAATGTGAGACTTGAAAAGATTGCATCTTGTGATAATGCAGCTGATGCATTGATTAAAATGTTACCTCTAGGCAAGTTTGAAAGTTGCCTTAAAACTCTCAATATTGGTCCTAAAGCTAGCCTTCTAGGAGTGAAGCTTGTTGCTCCGTTTTTTGCATTTGAAGCATTTGTTATTGATCTCTTGGAGAGAGGTGCTGAAGCTCTCTCTTTTACTCAGGAGGGCGTTCCAGTCTATGTTCTGTGGTGTGTGGAATTGAAATATTAG ATGAACATCCCTAATACTGCTGCCATTGATGATATGAAGCAGAAATTAACAACATTGAAGCTATCTGAACAAGACTATTGTTTGAAAATGCTTAAAAGGTTTGACATGTCTACTTGTAAACCTGTAAATGTTTCAATTGCTAATCATTTTAAGCTTTCAAGGCAAGATTCACCCCAAACTACTGAAGAAAAGCAACAAATGGAAGCCATACCATATGCAAATGTCATGGGAAGTCTTATGTACCTTATGGGTTGTACACGACCAGACTTGGCACATCGGCTGAGTGTAGTAAGTAGGTACATGGAAAATCCTGGGAAAACTCATTGGATGGCAATGAAATGGCTATTGAGATATGTTAAAGGAACGGTGTCATATGGTCTGCTTTATAATGTTGTTTCTTCACAGGAAACAGAGGTGGTTAGCTATGTGGATGCGGATTATGCAACTGATCTTGATAGAATAAGGTCTTTCACAGTCTTTTTGTCTAAAAACCAAACTTTCCATGAAAGAACAAAGCACATCGATGTGAGGTATCATTTCATTAGAGATATAATTGCTGAAGGAAATGTGAGACTTGAAAAGATTGCATCTTGTGATAATGCAGCTGATGCATTGATTAAAATGTTACCTCTAGGCAAGTTTGAAAGTTGCCTTAAAACTCTCAATATTGGTCCTAAAGCTAGCCTTCTAGGAGTGAAGCTTGTTGCTCCGTTTTTTGCATTTGAAGCATTTGTTATTGATCTCTTGGAGAGAGGTGCTGAAGCTCTCTCTTTTACTCAGGAGGGCGTTCCAGTCTATGTTCTGTGGTGTGTGGAATTGAAATATTAG MNIPNTAAIDDMKQKLTTLKLSEQDYCLKMLKRFDMSTCKPVNVSIANHFKLSRQDSPQTTEEKQQMEAIPYANVMGSLMYLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYGLLYNVVSSQETEVVSYVDADYATDLDRIRSFTVFLSKNQTFHERTKHIDVRYHFIRDIIAEGNVRLEKIASCDNAADALIKMLPLGKFESCLKTLNIGPKASLLGVKLVAPFFAFEAFVIDLLERGAEALSFTQEGVPVYVLWCVELKY Homology
BLAST of Lag0007522 vs. NCBI nr
Match: KAG8502437.1 (hypothetical protein CXB51_000388 [Gossypium anomalum]) HSP 1 Score: 210.7 bits (535), Expect = 1.6e-50 Identity = 110/245 (44.90%), Postives = 153/245 (62.45%), Query Frame = 0
BLAST of Lag0007522 vs. NCBI nr
Match: KAG8480945.1 (hypothetical protein CXB51_025615 [Gossypium anomalum]) HSP 1 Score: 208.8 bits (530), Expect = 6.1e-50 Identity = 109/239 (45.61%), Postives = 151/239 (63.18%), Query Frame = 0
BLAST of Lag0007522 vs. NCBI nr
Match: KAG8485521.1 (hypothetical protein CXB51_019057 [Gossypium anomalum]) HSP 1 Score: 206.5 bits (524), Expect = 3.0e-49 Identity = 109/249 (43.78%), Postives = 152/249 (61.04%), Query Frame = 0
BLAST of Lag0007522 vs. NCBI nr
Match: KAG8482924.1 (hypothetical protein CXB51_024275 [Gossypium anomalum]) HSP 1 Score: 205.3 bits (521), Expect = 6.8e-49 Identity = 108/249 (43.37%), Postives = 151/249 (60.64%), Query Frame = 0
BLAST of Lag0007522 vs. NCBI nr
Match: KAG8481491.1 (hypothetical protein CXB51_026341 [Gossypium anomalum]) HSP 1 Score: 204.9 bits (520), Expect = 8.8e-49 Identity = 108/248 (43.55%), Postives = 150/248 (60.48%), Query Frame = 0
BLAST of Lag0007522 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.4e-41 Identity = 95/265 (35.85%), Postives = 138/265 (52.08%), Query Frame = 0
BLAST of Lag0007522 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 93.6 bits (231), Expect = 3.8e-18 Identity = 68/265 (25.66%), Postives = 113/265 (42.64%), Query Frame = 0
BLAST of Lag0007522 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.2e-17 Identity = 72/272 (26.47%), Postives = 113/272 (41.54%), Query Frame = 0
BLAST of Lag0007522 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.1e-14 Identity = 40/97 (41.24%), Postives = 65/97 (67.01%), Query Frame = 0
BLAST of Lag0007522 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.0e-07 Identity = 41/142 (28.87%), Postives = 73/142 (51.41%), Query Frame = 0
BLAST of Lag0007522 vs. ExPASy TrEMBL
Match: A0A2N9FLA5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15860 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 9.5e-49 Identity = 103/236 (43.64%), Postives = 145/236 (61.44%), Query Frame = 0
BLAST of Lag0007522 vs. ExPASy TrEMBL
Match: A0A2Z7C9U2 (Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_41481 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 1.6e-48 Identity = 109/269 (40.52%), Postives = 147/269 (54.65%), Query Frame = 0
BLAST of Lag0007522 vs. ExPASy TrEMBL
Match: A0A251V331 (Putative zinc finger, CCHC-type OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr04g0128481 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 8.1e-48 Identity = 109/272 (40.07%), Postives = 143/272 (52.57%), Query Frame = 0
BLAST of Lag0007522 vs. ExPASy TrEMBL
Match: A0A2U1MW82 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Artemisia annua OX=35608 GN=CTI12_AA173710 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 2.3e-47 Identity = 107/276 (38.77%), Postives = 150/276 (54.35%), Query Frame = 0
BLAST of Lag0007522 vs. ExPASy TrEMBL
Match: A0A2N9IWT1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56495 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 4.0e-47 Identity = 100/233 (42.92%), Postives = 142/233 (60.94%), Query Frame = 0
BLAST of Lag0007522 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein ) HSP 1 Score: 57.4 bits (137), Expect = 2.1e-08 Identity = 41/142 (28.87%), Postives = 73/142 (51.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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