Lag0007522 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0007522
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr9: 661995 .. 664107 (+)
RNA-Seq ExpressionLag0007522
SyntenyLag0007522
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACATCCCTAATACTGCTGCCATTGATGATATGAAGCAGAAATTAACAAGTAAGTTTGAGATGAAAGATTTAGGACATACTCGACAGATTTGGGGCATTTACATTATATGAAACCGAAAGCTGGGAGCATTGAAGCTATCTGAACAAGACTATTGTTTGAAAATGCTTAAAAGGTTTGACATGTCTACTTGTAAACCTGTAAATGTTTCAATTGCTAATCATTTTAAGCTTTCAAGGCAAGATTCACCCCAAACTACTGAAGAAAAGCAACAAATGGAAGCCATACCATATGCAAATGTCATGGGAAGTCTTATGTACCTTATGGGTTGTACACGACCAGACTTGGCACATCGGCTGAGTGTAGTAAGTAGGTACATGGAAAATCCTGGGAAAACTCATTGGATGGCAATGAAATGGCTATTGAGATATGTTAAAGGAACGGTGTCATATGGTCTGCTTTATAATGTTGTTTCTTCACAGGAAACAGAGGTGGTTAGCTATGTGGATGCGGATTATGCAACTGATCTTGATAGAATAAGGTCTTTCACAGGTTTGTCTTTCACTTATTTGGTAATACAGTAAGTTGGAAGTCATCACTTCAATCTGTAGTTGCTTTTATCAACAATTGAGTCTGAATATATGGTTGTAACTGAGGCATTTAAAGAGGTTTTGTGGTTGCTTGAATTGTGTGAAGAATTAGGGGAAAGTCTTAAAGATCAGTTGGTTATTTTAATTTCTGTGACAGTAAAAGTGCAGTCTTTTTGTCTAAAAACCAAACTTTCCATGAAAGAACAAAGCACATCGATGTGAGGTATCATTTCATTAGAGATATAATTGCTGAAGGAAATGTGAGACTTGAAAAGATTGCATCTTGTGATAATGCAGCTGATGCATTGATTAAAATGTTACCTCTAGGCAAGTTTGAAAGTTGCCTTAAAACTCTCAATATTGGTCCTAAGTAATTGTTTGATTTAGAGGCACTACATTTATAGAATCTGAGCTGTTTTTGGTGGATATGCTGTCAAGGTGTATAATTGTTGGAATATTTGTCGGCATTTATTGCTTATTCTATGTATTCCATTATAATAAGTTGTTTGTCTTATTTGTTATTAGCCCATCTGCAATGTTTATCTCGTCGGGTGATTTTTTTTTCTACTAAGTACTGTTGGGGGAAATTACAAATAACAGAGGAAATGGAGAAAATATTGAGAAAACAGACACGTAAACAATTAGGTTGAGGCGCGGGTATCTCGCTCTCTTTAAGGAGATTCAAGCCCTCTGCGGTGTATAATTCTTTATCAATCACCGGTGCAGCAGGTATTCTCAAGCCTGTCCCCTCCAGGATACAACAACCCAACTGAAACGTTGTGTAGCTCAAACCACTCTGTACTAAGAGGTTGAGCTCAAAGCTCCACAACAAAGAACACCCCTCTTTTGGCCAATTGCTCTTGAAAGAGCAAATGAGAGAAATATGAGAAAGTAGAAAGAAGATAAGATTGAAATTGTTGTATTTCTTGTTATATGGAAAGTGTTTGGTGTGAGAGGTATTTATAGGATTTTCTAGATCTATAAATTTAATACAAAACAAAAGTAACCAGAATAAAACTCTCCTACCCAATACGTTTTTCTCTTTTAAAATGGGAGAAAACTCTCCAAAATTAATAACTCATATTTAAAATACAATTAAATATTAAAATGTTACAACAAGTACAATCAACATATTTGTACAGCATGATGTCTAAGTGTACAAGGGTTGCCAATTCATGTCTGATTTGGGCCACATGGTTAGTTGCACATTTCTGTTACGAGGGCAGCAGAGATTCAGTTATACCCTCCATCAGCTAACGTATGCAAATGTAGAGAAAAGGGTTTTATTCATTCCTCTCATTCGATTGAAGGTAGATGGAGCTGAGAGTGAGAGTCCATAATCTTAAACAATGTGAGAGTGTTGCTGAGTAGAGCTAGCCTTCTAGGAGTGAAGCTTGTTGCTCCGTTTTTTGCATTTGAAGCATTTGTTATTGATCTCTTGGAGAGAGGTGCTGAAGCTCTCTCTTTTACTCAGGAGGGCGTTCCAGTCTATGTTCTGTGGTGTGTGGAATTGAAATATTAG

mRNA sequence

ATGAACATCCCTAATACTGCTGCCATTGATGATATGAAGCAGAAATTAACAACATTGAAGCTATCTGAACAAGACTATTGTTTGAAAATGCTTAAAAGGTTTGACATGTCTACTTGTAAACCTGTAAATGTTTCAATTGCTAATCATTTTAAGCTTTCAAGGCAAGATTCACCCCAAACTACTGAAGAAAAGCAACAAATGGAAGCCATACCATATGCAAATGTCATGGGAAGTCTTATGTACCTTATGGGTTGTACACGACCAGACTTGGCACATCGGCTGAGTGTAGTAAGTAGGTACATGGAAAATCCTGGGAAAACTCATTGGATGGCAATGAAATGGCTATTGAGATATGTTAAAGGAACGGTGTCATATGGTCTGCTTTATAATGTTGTTTCTTCACAGGAAACAGAGGTGGTTAGCTATGTGGATGCGGATTATGCAACTGATCTTGATAGAATAAGGTCTTTCACAGTCTTTTTGTCTAAAAACCAAACTTTCCATGAAAGAACAAAGCACATCGATGTGAGGTATCATTTCATTAGAGATATAATTGCTGAAGGAAATGTGAGACTTGAAAAGATTGCATCTTGTGATAATGCAGCTGATGCATTGATTAAAATGTTACCTCTAGGCAAGTTTGAAAGTTGCCTTAAAACTCTCAATATTGGTCCTAAAGCTAGCCTTCTAGGAGTGAAGCTTGTTGCTCCGTTTTTTGCATTTGAAGCATTTGTTATTGATCTCTTGGAGAGAGGTGCTGAAGCTCTCTCTTTTACTCAGGAGGGCGTTCCAGTCTATGTTCTGTGGTGTGTGGAATTGAAATATTAG

Coding sequence (CDS)

ATGAACATCCCTAATACTGCTGCCATTGATGATATGAAGCAGAAATTAACAACATTGAAGCTATCTGAACAAGACTATTGTTTGAAAATGCTTAAAAGGTTTGACATGTCTACTTGTAAACCTGTAAATGTTTCAATTGCTAATCATTTTAAGCTTTCAAGGCAAGATTCACCCCAAACTACTGAAGAAAAGCAACAAATGGAAGCCATACCATATGCAAATGTCATGGGAAGTCTTATGTACCTTATGGGTTGTACACGACCAGACTTGGCACATCGGCTGAGTGTAGTAAGTAGGTACATGGAAAATCCTGGGAAAACTCATTGGATGGCAATGAAATGGCTATTGAGATATGTTAAAGGAACGGTGTCATATGGTCTGCTTTATAATGTTGTTTCTTCACAGGAAACAGAGGTGGTTAGCTATGTGGATGCGGATTATGCAACTGATCTTGATAGAATAAGGTCTTTCACAGTCTTTTTGTCTAAAAACCAAACTTTCCATGAAAGAACAAAGCACATCGATGTGAGGTATCATTTCATTAGAGATATAATTGCTGAAGGAAATGTGAGACTTGAAAAGATTGCATCTTGTGATAATGCAGCTGATGCATTGATTAAAATGTTACCTCTAGGCAAGTTTGAAAGTTGCCTTAAAACTCTCAATATTGGTCCTAAAGCTAGCCTTCTAGGAGTGAAGCTTGTTGCTCCGTTTTTTGCATTTGAAGCATTTGTTATTGATCTCTTGGAGAGAGGTGCTGAAGCTCTCTCTTTTACTCAGGAGGGCGTTCCAGTCTATGTTCTGTGGTGTGTGGAATTGAAATATTAG

Protein sequence

MNIPNTAAIDDMKQKLTTLKLSEQDYCLKMLKRFDMSTCKPVNVSIANHFKLSRQDSPQTTEEKQQMEAIPYANVMGSLMYLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYGLLYNVVSSQETEVVSYVDADYATDLDRIRSFTVFLSKNQTFHERTKHIDVRYHFIRDIIAEGNVRLEKIASCDNAADALIKMLPLGKFESCLKTLNIGPKASLLGVKLVAPFFAFEAFVIDLLERGAEALSFTQEGVPVYVLWCVELKY
Homology
BLAST of Lag0007522 vs. NCBI nr
Match: KAG8502437.1 (hypothetical protein CXB51_000388 [Gossypium anomalum])

HSP 1 Score: 210.7 bits (535), Expect = 1.6e-50
Identity = 110/245 (44.90%), Postives = 153/245 (62.45%), Query Frame = 0

Query: 14   QKLTTLKLSEQDYCLKMLKRFDMSTCKPVNVSIANHFKLSRQDSPQTTEEKQQMEAIPYA 73
            +K + L LS++ Y  K L RF+M + KPV+  +A HF+LS   SPQ+ +E + M  +PY+
Sbjct: 893  RKASKLYLSQKGYIEKALCRFNMQSAKPVSTLLAAHFRLSSALSPQSDDEIEYMSHVPYS 952

Query: 74   NVMGSLMYLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYGLLYNVVS 133
            +V+GSLMY M C+RPDL++ +S VSRYM NPGK HW A++W+LRY++GT    L +    
Sbjct: 953  SVVGSLMYAMVCSRPDLSYAVSAVSRYMANPGKEHWKAVQWILRYLRGTTDVCLQF---G 1012

Query: 134  SQETEVVSYVDADYATDLDRIRSFT----------------------------------- 193
              + EV+ YVDAD+A DLDR RSFT                                   
Sbjct: 1013 RTKDEVIGYVDADFAGDLDRRRSFTGYVFTIGGCAISWKAIFELNEDLQISTVFCDSQSA 1072

Query: 194  VFLSKNQTFHERTKHIDVRYHFIRDIIAEGNVRLEKIASCDNAADALIKMLPLGKFESCL 224
            +FL+K+Q FHERTKHIDVRYHF+RDIIA G++ + KI++ +N AD + K LP+ KFE CL
Sbjct: 1073 IFLTKDQMFHERTKHIDVRYHFVRDIIARGDIVVSKISTHENPADMMTKSLPITKFEHCL 1132

BLAST of Lag0007522 vs. NCBI nr
Match: KAG8480945.1 (hypothetical protein CXB51_025615 [Gossypium anomalum])

HSP 1 Score: 208.8 bits (530), Expect = 6.1e-50
Identity = 109/239 (45.61%), Postives = 151/239 (63.18%), Query Frame = 0

Query: 14  QKLTTLKLSEQDYCLKMLKRFDMSTCKPVNVSIANHFKLSRQDSPQTTEEKQQMEAIPYA 73
           +K + L LS++ Y  K+L RF+M + KPV+  +A HF+LS   SPQ+ +E + M  +PY+
Sbjct: 723 RKTSKLYLSQKGYIEKLLCRFNMWSAKPVSTPLAAHFRLSSALSPQSDDEIEYMSHVPYS 782

Query: 74  NVMGSLMYLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYGLLYNVVS 133
           + +GSLMY M C+RPDL++ +S VSRYM NPGK HW A++W+LRY++GT    L +    
Sbjct: 783 SAVGSLMYAMVCSRPDLSYAVSAVSRYMANPGKEHWKAVQWILRYLRGTTDVCLQF---G 842

Query: 134 SQETEVVSYVDADYATDLDRIRSFTV-----------------------------FLSKN 193
             E  V+ YVDAD+A DLDR RS TV                             FL+K+
Sbjct: 843 RTEDGVIGYVDADFAGDLDRRRSLTVMSLQSEGLFSELNEDLQISTVFCDSQSAIFLTKD 902

Query: 194 QTFHERTKHIDVRYHFIRDIIAEGNVRLEKIASCDNAADALIKMLPLGKFESCLKTLNI 224
           Q FHERTKHIDVRYHF+RDIIA G++ + KI++ +N AD + K LP+ KFE CL  + +
Sbjct: 903 QMFHERTKHIDVRYHFVRDIIARGDIVVSKISTHENPADMMTKSLPITKFEHCLDLVGV 958

BLAST of Lag0007522 vs. NCBI nr
Match: KAG8485521.1 (hypothetical protein CXB51_019057 [Gossypium anomalum])

HSP 1 Score: 206.5 bits (524), Expect = 3.0e-49
Identity = 109/249 (43.78%), Postives = 152/249 (61.04%), Query Frame = 0

Query: 14  QKLTTLKLSEQDYCLKMLKRFDMSTCKPVNVSIANHFKLSRQDSPQTTEEKQQMEAIPYA 73
           +K + L LS++ Y  K+L RF+M + KPV+ S+A  F+LS   SPQ+ +E + M  +PY+
Sbjct: 152 RKTSKLYLSQKGYIEKLLCRFNMRSAKPVSTSLAAQFRLSSALSPQSDDEIEYMSHVPYS 211

Query: 74  NVMGSLMYLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYGLLYNVVS 133
           + +GSLMY M C+RPDL++ +S VSRYM NPGK HW A++W+LRY++GT    L +    
Sbjct: 212 SAVGSLMYAMVCSRPDLSYAVSAVSRYMANPGKEHWKAVQWILRYLRGTTDVCLQF---G 271

Query: 134 SQETEVVSYVDADYATDLDRIRSFT----------------------------------- 193
             E EV+ YVDAD+A DLDR RS T                                   
Sbjct: 272 RTEDEVIRYVDADFAGDLDRRRSLTAEYMAITEACKEAIWLKGLFSELNEDLQISTVFCD 331

Query: 194 ----VFLSKNQTFHERTKHIDVRYHFIRDIIAEGNVRLEKIASCDNAADALIKMLPLGKF 224
               +FL+K+Q FHERTKHIDVRYHF+RDIIA G++ + KI++ +N AD + K LP+ KF
Sbjct: 332 SQSAIFLTKDQMFHERTKHIDVRYHFVRDIIARGDIVVSKISTHENPADMMTKSLPITKF 391

BLAST of Lag0007522 vs. NCBI nr
Match: KAG8482924.1 (hypothetical protein CXB51_024275 [Gossypium anomalum])

HSP 1 Score: 205.3 bits (521), Expect = 6.8e-49
Identity = 108/249 (43.37%), Postives = 151/249 (60.64%), Query Frame = 0

Query: 14   QKLTTLKLSEQDYCLKMLKRFDMSTCKPVNVSIANHFKLSRQDSPQTTEEKQQMEAIPYA 73
            +K + L LS++ Y  K+L RF+M + KPV+  +A HF+LS   SPQ+ +E + M  +PY+
Sbjct: 921  RKTSKLYLSQKGYIEKLLCRFNMRSAKPVSTPLAAHFRLSSALSPQSDDEIEYMSHVPYS 980

Query: 74   NVMGSLMYLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYGLLYNVVS 133
            + +GSLMY M C+RPDL++ +S VSRYM NPGK HW A++W+LRY++GT    L +    
Sbjct: 981  SAVGSLMYAMVCSRPDLSYAVSAVSRYMANPGKEHWKAVQWILRYLRGTTDVCLQF---G 1040

Query: 134  SQETEVVSYVDADYATDLDRIRSFT----------------------------------- 193
              E  V+ YVDAD+A DLDR RS T                                   
Sbjct: 1041 RTEDGVIGYVDADFAGDLDRRRSLTAEYMAITEACKEAIWLKGLFSELNEDLQISTVFCD 1100

Query: 194  ----VFLSKNQTFHERTKHIDVRYHFIRDIIAEGNVRLEKIASCDNAADALIKMLPLGKF 224
                +FL+K+Q FHERTKHIDVRYHF+RDIIA G++ + KI++ +N AD + K LP+ KF
Sbjct: 1101 SQSAIFLTKDQMFHERTKHIDVRYHFVRDIIARGDIVVSKISTHENPADMMTKSLPITKF 1160

BLAST of Lag0007522 vs. NCBI nr
Match: KAG8481491.1 (hypothetical protein CXB51_026341 [Gossypium anomalum])

HSP 1 Score: 204.9 bits (520), Expect = 8.8e-49
Identity = 108/248 (43.55%), Postives = 150/248 (60.48%), Query Frame = 0

Query: 14   QKLTTLKLSEQDYCLKMLKRFDMSTCKPVNVSIANHFKLSRQDSPQTTEEKQQMEAIPYA 73
            +K + L LS++ Y  K+L RF+M + KPV+  +A HF+LS   SPQ+ +E + M  +PY+
Sbjct: 863  RKTSKLYLSQKGYIEKLLCRFNMRSAKPVSTPLAAHFRLSSALSPQSDDEIEYMSHVPYS 922

Query: 74   NVMGSLMYLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYGLLYNVVS 133
            + +GSLMY M C+RPDL++ +S VSRYM NPGK HW A++W+LRY++GT    L +    
Sbjct: 923  SAVGSLMYAMVCSRPDLSYAVSAVSRYMANPGKEHWKAVQWILRYLRGTTDVCLQF---G 982

Query: 134  SQETEVVSYVDADYATDLDRIRSFT----------------------------------- 193
              E  V+ YVDAD+A DLDR RS T                                   
Sbjct: 983  RTEDGVIGYVDADFAGDLDRRRSLTAEYMAITEACKEAIWLKGLFSELNKDLQISTVFCD 1042

Query: 194  ----VFLSKNQTFHERTKHIDVRYHFIRDIIAEGNVRLEKIASCDNAADALIKMLPLGKF 223
                +FL+K+Q FHERTKHIDVRYHF+RDIIA G++ + K ++ +N AD + K LP+ KF
Sbjct: 1043 SQSAIFLTKDQMFHERTKHIDVRYHFVRDIIARGDIVVSKTSTHENPADMMTKSLPITKF 1102

BLAST of Lag0007522 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.4e-41
Identity = 95/265 (35.85%), Postives = 138/265 (52.08%), Query Frame = 0

Query: 19   LKLSEQDYCLKMLKRFDMSTCKPVNVSIANHFKLSRQDSPQTTEEKQQMEAIPYANVMGS 78
            L LS++ Y  ++L+RF+M   KPV+  +A H KLS++  P T EEK  M  +PY++ +GS
Sbjct: 1058 LWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGS 1117

Query: 79   LMYLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYGLLYNVVSSQETE 138
            LMY M CTRPD+AH + VVSR++ENPGK HW A+KW+LRY++GT    L +      +  
Sbjct: 1118 LMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCF---GGSDPI 1177

Query: 139  VVSYVDADYATDLDRIRSFT---------------------------------------- 198
            +  Y DAD A D+D  +S T                                        
Sbjct: 1178 LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEM 1237

Query: 199  --------------------------VFLSKNQTFHERTKHIDVRYHFIRDIIAEGNVRL 218
                                      + LSKN  +H RTKHIDVRYH+IR+++ + ++++
Sbjct: 1238 IWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKV 1297

BLAST of Lag0007522 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 93.6 bits (231), Expect = 3.8e-18
Identity = 68/265 (25.66%), Postives = 113/265 (42.64%), Query Frame = 0

Query: 21   LSEQDYCLKMLKRFDMSTCKPVNVSIAN--HFKLSRQDSPQTTEEKQQMEAIPYANVMGS 80
            LS+  Y  K+L +F+M  C  V+  + +  +++L   D    T         P  +++G 
Sbjct: 1137 LSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNT---------PCRSLIGC 1196

Query: 81   LMYLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYGLLYNVVSSQETE 140
            LMY+M CTRPDL   ++++SRY        W  +K +LRY+KGT+   L++    + E +
Sbjct: 1197 LMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENK 1256

Query: 141  VVSYVDADYA-TDLDRIRSFTVFLSK---------------------------------- 200
            ++ YVD+D+A +++DR +S T +L K                                  
Sbjct: 1257 IIGYVDSDWAGSEIDR-KSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVR 1316

Query: 201  ----------------------------------NQTFHERTKHIDVRYHFIRDIIAEGN 215
                                              N + H+R KHID++YHF R+ +    
Sbjct: 1317 EALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNV 1376

BLAST of Lag0007522 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.2e-17
Identity = 72/272 (26.47%), Postives = 113/272 (41.54%), Query Frame = 0

Query: 19   LKLSEQDYCLKMLKRFDMSTCKPVNVSIANHFKLSRQDSPQTTEEKQQMEAIPYANVMGS 78
            L LS++ Y L +L R +M T KPV   +A   KL+     +  +  +      Y  ++GS
Sbjct: 1181 LHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE------YRGIVGS 1240

Query: 79   LMYLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYGLLYNVVSSQETE 138
            L YL   TRPDL++ ++ +S+YM  P   HW A+K +LRY+ GT  +G+   +       
Sbjct: 1241 LQYL-AFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIF--LKKGNTLS 1300

Query: 139  VVSYVDADYATDLDR--------------------------IRSFT-------------- 198
            + +Y DAD+A D D                           +RS T              
Sbjct: 1301 LHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEL 1360

Query: 199  ---------------------------VFLSKNQTFHERTKHIDVRYHFIRDIIAEGNVR 224
                                        +L  N  FH R KHI + YHFIR+ +  G +R
Sbjct: 1361 QWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALR 1420

BLAST of Lag0007522 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.1e-14
Identity = 40/97 (41.24%), Postives = 65/97 (67.01%), Query Frame = 0

Query: 67  MEAIPYANVMGSLMYLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYG 126
           M+ +PY + +G++MYLM  TRPDLA  + V+S++  +P  THW A+K +LRY++ T +YG
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 127 LLYNVVSSQETEVVSYVDADYATDLDRIRSFTVFLSK 164
           L +    +   ++V Y DAD+A D++  RS + +L K
Sbjct: 61  LEFTRAGT--AKLVGYSDADWAGDVESRRSTSGYLFK 95

BLAST of Lag0007522 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.0e-07
Identity = 41/142 (28.87%), Postives = 73/142 (51.41%), Query Frame = 0

Query: 19  LKLSEQDYCLKMLKRFDMSTCKPVNVSIANHFKLSRQDSPQTTEEKQQMEAIPYANVMGS 78
           L LS+  Y  ++L    M  CKP++  +     L    S  T +     +   + +++G+
Sbjct: 54  LFLSQTKYAEQILNNAGMLDCKPMSTPL----PLKLNSSVSTAKYPDPSD---FRSIVGA 113

Query: 79  LMYLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYGLLYNVVSSQETE 138
           L YL   TRPD+++ +++V + M  P    +  +K +LRYVKGT+ +GL   +  + +  
Sbjct: 114 LQYLT-LTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY--IHKNSKLN 173

Query: 139 VVSYVDADYATDLDRIRSFTVF 161
           V ++ D+D+A      RS T F
Sbjct: 174 VQAFCDSDWAGCTSTRRSTTGF 185

BLAST of Lag0007522 vs. ExPASy TrEMBL
Match: A0A2N9FLA5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15860 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 9.5e-49
Identity = 103/236 (43.64%), Postives = 145/236 (61.44%), Query Frame = 0

Query: 19   LKLSEQDYCLKMLKRFDMSTCKPVNVSIANHFKLSRQDSPQTTEEKQQMEAIPYANVMGS 78
            L LS+++Y  K+L++F M   KPV+  +ANHF+LS    P+  EE + M  +PYA+ +G 
Sbjct: 920  LWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSGSQCPKNEEEIENMSKVPYASAVGC 979

Query: 79   LMYLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYGLLYNVVSSQETE 138
            LMY M CTRPDLAH +S VSRYM NPG+ HW A+KW+ RY+KGT  +G+L++    +   
Sbjct: 980  LMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFS-RQPRTNS 1039

Query: 139  VVSYVDADYATDLDRIRSFT-------------------------------VFLSKNQTF 198
            VV YVDADYA ++D  RS T                               ++L+KNQ +
Sbjct: 1040 VVGYVDADYAGEVDDRRSTTAAKEALWLKGLVKELGLNQGGVQMHCDSQSAIYLAKNQVY 1099

Query: 199  HERTKHIDVRYHFIRDIIAEGNVRLEKIASCDNAADALIKMLPLGKFESCLKTLNI 224
            H RTKHIDVR+H IR++I  G++ LEK+ + +NAAD L K +   KF+ CL  +N+
Sbjct: 1100 HARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADMLTKPVTTAKFKHCLDLVNV 1154

BLAST of Lag0007522 vs. ExPASy TrEMBL
Match: A0A2Z7C9U2 (Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_41481 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.6e-48
Identity = 109/269 (40.52%), Postives = 147/269 (54.65%), Query Frame = 0

Query: 21  LSEQDYCLKMLKRFDMSTCKPVNVSIANHFKLSRQDSPQTTEEKQQMEAIPYANVMGSLM 80
           LS+ DY  K+L +F M   K V   +A HFKL+    P+T EEK+ M+++PYANV+GS+M
Sbjct: 26  LSQSDYIEKILGKFGMLDAKAVTTPLAAHFKLTVTQVPETEEEKEYMKSVPYANVVGSVM 85

Query: 81  YLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYGLLYNVVSSQETEVV 140
           Y M CTRPDLAH +SVVSR+M NPGK HW A+KW++RY+KGT + GL+Y    +    V+
Sbjct: 86  YAMICTRPDLAHAVSVVSRFMANPGKCHWQALKWMMRYLKGTQNLGLVYGGNQTGGEAVL 145

Query: 141 SYVDADYATDLDRIRSFT------------------------------------------ 200
            YVD+DYA  +D  RS T                                          
Sbjct: 146 GYVDSDYAGSIDTRRSLTGYVFTVYGTAVSWKANLQSVVALSTTEAEYIAVTEAVKEALW 205

Query: 201 ------------------------VFLSKNQTFHERTKHIDVRYHFIRDIIAEGNVRLEK 224
                                   + L+KNQ FHERTKHIDV+ HF+R+++A G V +EK
Sbjct: 206 LKGLASELKLQDDTLVLLCDSQSAIHLTKNQVFHERTKHIDVKLHFVREVVAGGEVVIEK 265

BLAST of Lag0007522 vs. ExPASy TrEMBL
Match: A0A251V331 (Putative zinc finger, CCHC-type OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr04g0128481 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 8.1e-48
Identity = 109/272 (40.07%), Postives = 143/272 (52.57%), Query Frame = 0

Query: 19   LKLSEQDYCLKMLKRFDMSTCKPVNVSIANHFKLSRQDSPQTTEEKQQMEAIPYANVMGS 78
            L+L++  Y  K+L  F M  CKPV++  ANHFKLS Q+ P+  EE +QME  PYAN +GS
Sbjct: 1037 LRLTQSSYIRKVLNNFGMMNCKPVSIPFANHFKLSAQNCPKDEEEFKQMEKCPYANAVGS 1096

Query: 79   LMYLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYGLLYNVVSSQETE 138
            LMYLM CTRPD+ +  SVVSRY+ NPGK HW A+KWL+RY+KG+   GL +   S  +  
Sbjct: 1097 LMYLMVCTRPDIGYGASVVSRYLANPGKLHWEAVKWLMRYLKGSQEVGLTFRSKSEGDNL 1156

Query: 139  VVSYVDADYATDLDRIRSFT---------------------------------------- 198
            ++ YVD+D+A D DR RS T                                        
Sbjct: 1157 ILGYVDSDFAKDKDRGRSITGYGFKVKGNLVSWKASLQHVVALSSTEAEYIALTEAVKEA 1216

Query: 199  --------------------------VFLSKNQTFHERTKHIDVRYHFIRDIIAEGNVRL 225
                                      V LSKN  +HERTKHI+VR HFIRD++    VR+
Sbjct: 1217 IWLKGFVAELGAVFDETVVVCDNQGAVQLSKNSVYHERTKHINVRLHFIRDVVNSKEVRI 1276

BLAST of Lag0007522 vs. ExPASy TrEMBL
Match: A0A2U1MW82 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Artemisia annua OX=35608 GN=CTI12_AA173710 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.3e-47
Identity = 107/276 (38.77%), Postives = 150/276 (54.35%), Query Frame = 0

Query: 14   QKLTTLKLSEQDYCLKMLKRFDMSTCKPVNVSIANHFKLSRQDSPQTTEEKQQMEAIPYA 73
            +K+  L LS+ DY  K+LKRF+MS CKP+   +A HFKLS  + P++ E+K+ M  +PY+
Sbjct: 1008 RKMGKLTLSQSDYISKVLKRFNMSNCKPILTPLAPHFKLSSHECPKSEEDKEDMSLVPYS 1067

Query: 74   NVMGSLMYLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYGLLYNVVS 133
            + +GSLMY M CTRPDLAH +SVVSRYM NPG+ HW A+K +LRY+KGT + GL +    
Sbjct: 1068 SAVGSLMYAMVCTRPDLAHAVSVVSRYMHNPGRMHWKAVKCILRYLKGTSNIGLSFEKSR 1127

Query: 134  SQETEVVSYVDADYATDLDRIRSFT----------------------------------- 193
            +    +V YVD+DYA DLD  +S +                                   
Sbjct: 1128 ASPNGIVGYVDSDYAGDLDARKSLSSYVFSHCGSAISWYSSLQAITALSTTEAEYISSTE 1187

Query: 194  -------------------------------VFLSKNQTFHERTKHIDVRYHFIRDIIAE 224
                                           V L+KN  FH +TKHI+VR+HF+RDI+ +
Sbjct: 1188 GVKEAIWLRGMVNELGLSQNVLVVYCDNRSAVHLTKNNKFHSKTKHIEVRHHFVRDIVEK 1247

BLAST of Lag0007522 vs. ExPASy TrEMBL
Match: A0A2N9IWT1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56495 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 4.0e-47
Identity = 100/233 (42.92%), Postives = 142/233 (60.94%), Query Frame = 0

Query: 19   LKLSEQDYCLKMLKRFDMSTCKPVNVSIANHFKLSRQDSPQTTEEKQQMEAIPYANVMGS 78
            L LS+++Y  K+L++F M   KPV+  +ANHF+LS    P+  EE + M  +PYA+ +G 
Sbjct: 989  LWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSGSQCPKNEEEIENMSKVPYASAVGC 1048

Query: 79   LMYLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYGLLYNVVSSQETE 138
            LMY M CTRPDLAH +S VSRYM NPG+ HW A+KW+ RY+KGT  +G+L++      + 
Sbjct: 1049 LMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNS- 1108

Query: 139  VVSYVDADYATDLDR----------------------------IRSFTVFLSKNQTFHER 198
            VV YVDADYA ++D                                  ++L+KNQ +H R
Sbjct: 1109 VVGYVDADYAGEVDDRSCKGSIVVKGASQRKLGLNQGGVQMHCDSQSAIYLAKNQVYHAR 1168

Query: 199  TKHIDVRYHFIRDIIAEGNVRLEKIASCDNAADALIKMLPLGKFESCLKTLNI 224
            TKHIDVR+H IR++I  G++ LEK+ + +NAAD L K +   KF+ CL  +N+
Sbjct: 1169 TKHIDVRFHKIRELIVTGDIVLEKVHTSENAADMLTKPVTTAKFKHCLDLVNV 1220

BLAST of Lag0007522 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 2.1e-08
Identity = 41/142 (28.87%), Postives = 73/142 (51.41%), Query Frame = 0

Query: 19  LKLSEQDYCLKMLKRFDMSTCKPVNVSIANHFKLSRQDSPQTTEEKQQMEAIPYANVMGS 78
           L LS+  Y  ++L    M  CKP++  +     L    S  T +     +   + +++G+
Sbjct: 54  LFLSQTKYAEQILNNAGMLDCKPMSTPL----PLKLNSSVSTAKYPDPSD---FRSIVGA 113

Query: 79  LMYLMGCTRPDLAHRLSVVSRYMENPGKTHWMAMKWLLRYVKGTVSYGLLYNVVSSQETE 138
           L YL   TRPD+++ +++V + M  P    +  +K +LRYVKGT+ +GL   +  + +  
Sbjct: 114 LQYLT-LTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY--IHKNSKLN 173

Query: 139 VVSYVDADYATDLDRIRSFTVF 161
           V ++ D+D+A      RS T F
Sbjct: 174 VQAFCDSDWAGCTSTRRSTTGF 185

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG8502437.11.6e-5044.90hypothetical protein CXB51_000388 [Gossypium anomalum][more]
KAG8480945.16.1e-5045.61hypothetical protein CXB51_025615 [Gossypium anomalum][more]
KAG8485521.13.0e-4943.78hypothetical protein CXB51_019057 [Gossypium anomalum][more]
KAG8482924.16.8e-4943.37hypothetical protein CXB51_024275 [Gossypium anomalum][more]
KAG8481491.18.8e-4943.55hypothetical protein CXB51_026341 [Gossypium anomalum][more]
Match NameE-valueIdentityDescription
P109781.4e-4135.85Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041463.8e-1825.66Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT943.2e-1726.47Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P0CV721.1e-1441.24Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P... [more]
P925193.0e-0728.87Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A2N9FLA59.5e-4943.64Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15860 PE=4 SV=1[more]
A0A2Z7C9U21.6e-4840.52Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_41481 PE=4... [more]
A0A251V3318.1e-4840.07Putative zinc finger, CCHC-type OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr04g01... [more]
A0A2U1MW822.3e-4738.77Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Artemisia annua O... [more]
A0A2N9IWT14.0e-4742.92Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56495 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
ATMG00810.12.1e-0828.87DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF308SUBFAMILY NOT NAMEDcoord: 64..158
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 64..158
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 158..210
e-value: 9.55607E-22
score: 86.3681

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0007522.1Lag0007522.1mRNA