Lag0007508 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0007508
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionTy3-gypsy retrotransposon protein
Locationchr9: 337562 .. 343172 (+)
RNA-Seq ExpressionLag0007508
SyntenyLag0007508
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCCTTATTTGTCATACTTCCCTTTTCCCTTTGTCTCGAGTGGTTGTGGTTTAGAGGTTTGCAAGGATTCTTCCACGGTTGGAGCGTGTTCAAAAGAGTTGAGTGGTATGAATCTTGCTTCAGTCCCTTCGTTATGTGGGGTTTGCTTGGAGTTAGTCACCCCAACTTCTGAAAGGCTTGGTGGGTAACCAAGGTCCTAGGGACTTGTCCCACGTTGATTCTTTTCAAGATTTGCTTATTAGAGAGGCATGATTGGTGCTCGATCCTGAATAGTGGTTGCTTGCAAATTGTGCCTATTACCTTGATCAAAGCCTCGTTAGTGAAAAGGAAGGGGTGAAAGAAAGAGGTTGCTTTGGAGAAAAAGCCCTTAAGAGAGTTTAGGAACCTTGAGTGTTCAGTTAACTATGATGGAAAATGGTGAGATCGGGGGGATATTGAGAACTGATGGAAAAGGGTGAGATCGGGGGGGATATTGTTTCTCAATGAAATTCTTGCTTGGAATGTTAGGAGTTTAGGGTTAGGGAAAAAGGAAGTTTGGTGAAAGAGGAATTAAGGGAAAATTCCGATTTTGTCATTCTTCAGGAAACTAAGCGTAATAGGTATTGCAGTCATGTGTTAAAAGTTTGTGGGGCAATCAATTTGTTTTGAGTGGGTTGGTTGGAGCCTTGCTAGGTATCCTTATGATGTGGGATGAGAGACATTTTAAATTGATGGTTGTGTTGAAAGGTGTTTTCTCTGACTGTGGGTTTTGAGTTTCAAAATAGGGGAATTGGATGGAATTACAGGTTCATATGGTCCTCATTTGCCTAATGGGATAAAGACTTTTTGGGAAGAGTTAGGTAGCCTCTTTGGTCTTTATGGAGATTTTTGGTGCTTAGCTGGTGATTTCAATGTGACAAGGTTTCCCTTAGAGAAGTCTAGCGTAGGGTGGGTTACTAGATCAATGTAGTGTTTCAATAGTTTTATGGAGAGGTGTAATCTTATAGGCCCTCCTCTAGTTAACTGTTTTCCCTGGTCTAGTAGAACAAAGAGAGTGGCATGTTGTAGATTAGACATATTTCTCCTCTAAAGGTTGGTTGGAGTTCTTTCCTCATGCGAGGTCGTCAATGGGCCCTAAAATTACTTTAGATCTTTTTTTTTTCTTAAATAAGAAACAAAAATTTTCATTGATAAATTAAAAGAGACTAATGCTTAAGGATACTGTTAGGTATCCAAACTAAGAAAACACTCAAACTCTAATATATTGCAATATCAACAAGAAGCTACAATATGCCAATAGCCTTTCCAGAGGGCTATCTCTCTCCCAAAGTCTCACACTAAGACAATACCACTGAAATTTTTCACACCTTCTAAGGCTCTCAATTACCCTATTTATAATCAAGACCCCTCTATCTAATTACCACTATCCTTACTACTATTCCACTATTCCCCATATACCTCTATTAGTACTTTCGCATTACTCTGCCTTTCAAAGTCACCTTTTCCTCAAGGTGTGCTTACACAACCCAATCCTCAAGAAAATGAAATTACAGAGCCAATGCTCTTCCAAAGAAAGAAAATACTCATTCTTTAAAACAAAACCCAGCTAATTGGCACTTTGACGACCATGTGCAGTGATAGATGGTAGTGAGAAGCGGCGATTGGTGGCAACTCATGAAATGTTGATGGCATATCGTCGCAGAAGAGGTGATTGACCCCGACAAATGGTGACAGTTGATGGCGGCCAGTAGCGATGGACAACTATAGATGGTCGAGATGGTTGGTGGTGTGAGCTTGGCCAGTGGAGATGGTGGCAACATAATAGGAAACATGGACGACTAGGGTTTGTTCTTTTCATGTGGAGAGGATGACAAATCAGTTGGACCTTGCGTTTAAAATAAAGGAACGTCCAACCTAAAGCTCAATCTTGTTTAACAGTCCCTTTTTCGATCTTTGGAAGCAATTGTGCCAAACTTTTTTTTATTTGAATCTAACCCATTAAGTAGCCTACCCCTTTCTTTTGGATTCTTCTCCAAGATGATGTTCCACGTGATTAGGGTTAGTTTCGCTTTCTTTTGATTCTTTTCTTCTTGATTGGCCCACTCGGTTGTCGCTTCTTCATGAATGTTGCCTCGTTGCCATCTTTTATTTTTCCTCTCCTAGACCCTTTAAGGGGTTTTCATGTAGCTCTTTTTTTCAAATTCTTTGTGCCCTTCCTCCCTTCCATGGTGATTCTGCATTTTCTTCCCTATTTTTGGAACGTCCAATGCCAAAAGTCATTGAATGGGTAAGTCGCCAATCTCTATAACGAACTATGTAATGTACTTTATTTGTTGGGTTACGGGTGACCATTTTACTGGAGGTTTCTATTGTATCAATCTACAAAGGAAAGTTTCTATAACATTTTTAGGGAAACAAATAGATTTGGGAGGAGCTTTGGGATTGGATTAGATTTAACCCTTCTTTATGGGCATCCATTAATCGGACCTTTTGTAATTACCAGTTGGGGCTCATTCTTTTTGATTGAGATTCATTCTTGTAATTAGTTTTTGGGGCTTTTGTTAGTAGACTTGTATTTAGTTTTTGGGGCTTGTTTTTTGCATGCCCCTGTTCTTCCTTTCATTTTTCTTAATGGAGGTTCAATTATAAAAAAGAAAACATATGTTAAACTGCCTTGCATTTTTATTGAAGCTCCTATATTATCTAATGACTCCCATAGTTCCTTTTCTTCCCCTTCCCCCCTATTACTGTTGGGACGATTTATTAAACCTATTGAGGCTTCTAGACTTTTGCAAGATATGTCTCACAGAGAAACATTGTGATGATCTGTACCCACCCAACCCCATCCTTCCCGATTGATTATGGATCTATGATCCTCATCAAACTTTCAAGCAAAAGTAGAAATCACAACCTTCCCCATTTAGCCATGATTGAAAGAAAACTCTACACCATTGAGTAGTGTTTTAAAAGGCATGCCCACGCACGAAGCAAGGCACACACCCAACGCACCTCTAGGGTCCTCTTTATTTTAATCGTTTTTTAAACCCTAAATAGTGCGCTTGTGGTTATTATTAAAAAAATTATAAAAACATATATCCCTAAACGCTATACCCCTTGCATATAGAGTTATGTTTATTTCATTTTTTTAAAAATAAAATATATGAAACTTATGAGACGAGGGAGAGGCACGACAATTGCACCCCCCCCCCCCCACCCAATTTCTTTTCATCTTCTCCACAGTGCGCTTATGGTTATTATTAAAAAAATTATAAAAACATAAATCCCTAAACGCTATACCCCTTGCATATAGAGTTATGTTTATTTCATTTTTTTTAAAATAAAATATATGAAACTTATGAGACGAGGGAGAGGCACGACAATTGCACCCCCCCCACCCAATTTCTTTTCATCTTTTTCACATTGATGAACAATTCTTCTTCCTCTTTCTACTCTTCGCTTCCAGCTATCTCTCGGTCTTCTTTGTTCGTCTCTTTCTCTCTGCCAACTTTCTATCTCGGTTTTTCTCTCTCTCTCCAAGTCTTTTCATTTCACTCGTCACTTGGTTTCCCTTTCTCCATCTCACTCTTAGTTTATTCTCTCTTTCTCTCCCTAACTATTTGTATTTTATTAAGTTAGTCTAAAATTATAATATGAGATAATTAAGTTGATCATTTAAAACTTCATTTCTTTCTAGGAGGATTTTTTAAAACAAAGGACAAAACTTTTCATTAAGGAAATGGAAAGAGACTAAAAAATACAAACTCGAGATAAAAATAAAAGAAAAGCAGATTTTTTTTAATAAGAAACCTCAAAGGGAATATATATTATCAACAAAAGGGCAAAATAGCCTAAGGGCTAGGGTGGAGATCACCCCTCCCATAAACTATCTCAAAAGAGCTTGCCAATCTTTAATTATCATCAATAGACTATAATTACAAAAGAACTTTTTATGTAAAGTAATCCACCAAGAAGTCGTATTTTGTACATAGTTACAAAAGAATCTAAACGTGTGGATTCATCTTCAAACGTTCTCGCGCTCATTTCTTTCCACAAGAGCCAAAGAGTTGCTCTAATAGCACAACTAGCTATTATCTTAGCTTTCCCCTTCATATGGCAAACACTAAGCCTTTCCACCACCCAATTGTCTACCTTTCTAGGCAAGCATAACAAGATCCCTAAGGGCTAATAGCCCAACTACAAAACACCAAGCCTTATAGGAAAAATCACAATGGACAAATAGGTGATCAATGTTCTCACTATCTTTTAGGCAGAGATGATGTTAGACCTTCAGTGATAAGTCTACTCAAGAAAGGACAAATAGGGAAATAGGACTTTAGATAACATTTAACTGATAGCAGTTTTTATGTTGTTGGTTTAAATGTTTTTGAATAGGGAGTTATAACTTCCAATTAGTTGGTTGTCTTATCTTCTGTATATATGTTAGTTATTTTGGAGTCAGGTTTGTAGAGTTTTATTTGAAAGTTGTTTGTAGATGGAGAGAACAATGACCTTCTCGAATTGGTCATTTGTGGATAGGTTGTAATCCTCCCGAGAGGAAGTTAGTAAATAAAGGATACCTATCAATTTGGTATTAGAGCACATCTTTTGATCTGGGAGAAGGCAAGAAACACATGGCCCAGAAGAAAATTGATGAACGTTTTGAAGTAGTTGAGAAAGAGATGAGTGAGATGAGTGGTGAACTACCACTTACCTGGACTAGAGCGAGCCATTGAGAGTCTCAAAGAGGACATTGGCCAAATTCTCCTTGCTTTGTAGGACACGTGACCCTTCCCAATGCAAGTTTTACATTTCGACAATGACAAGACCCCAACGAGGGAGATGACGAAGACCAGCGAACCATTTGGACACTTCGCCGATGGTGACTACAAGGGGTAAAAAGTATGGGTGAAATAGTAGAACACCGTTGTCAGAAAAAAATTGAGATGCCGATTTTTTATGGTGATGATCCGAAATCCTGGATTTTTTCAGGTCGAGTGATATTTCAACATCCACACTTTGACAGATTCTGAGAAATTGGTGGTTGCAGTTGTCAGTTTGGCGGTCTGTGCAGTCAAGTGGTTTCAATGGGCAGAAAAAAGACGACCTTTTGTTAATTGGAAAGACCTTTGCGCCCGACTTACTAAGCGTTATCATCCCTTGCGTCCAAGCGATACCCACATATGTTTCCTCAAAATCAAGCCGAAAGACATGGTTTTGGATTATTGCAAACAGTTTGAAGCGATGACTAGTTTACTTTTCGATATTTTTGAATTTGTTTTGCGCAGCACCTTCATGAAAGGTTTAAAGAAATGCATACGTATAGATGTACACCTCTTTAAACCTACTACCCTTGAGGATATGATGGAATTAGCCCAACTAGCAGAGGATAGTGCAACATACAACATGGCCCATGAGTCTAATTCGCATAGCTGGCCCATGGGTCGTGGTTTTTCAGCATCTCCCTATCGTAAACCCTCTGAGGGTGAAATCACTCGCACGATCACACTTGGTGATCGAACCCAGCGGTACCAAATCTCCCTAAAACCGCAACAACTACAAGTTTTCAGAAACAGGTGGCCACCCCCATTCATCCTCGATTCCACGCTACAAGTGCCTATTAGATGCTGA

mRNA sequence

ATGTTTCCTTATTTGTCATACTTCCCTTTTCCCTTTGTCTCGAGTGGTTGTGGTTTAGAGGTTTGCAAGGATTCTTCCACGGTTGGAGCGTGTTCAAAAGAGTTGAGTGGTATGAATCTTGCTTCAGTCCCTTCGTTATGTGGGGTTTGCTTGGAGTTAGTCACCCCAACTTCTGAAAGGCTTGGGGAATTGGATGGAATTACAGGTTCATATGGTCCTCATTTGCCTAATGGGATAAAGACTTTTTGGGAAGAGTTAGGTAGCCTCTTTGGTCTTTATGGAGATTTTTGGTGCTTAGCTGTGATAGATGGTAGTGAGAAGCGGCGATTGGTGGCAACTCATGAAATGTTGATGGCATATCGTCGCAGAAGAGATTCTGAGAAATTGGTGGTTGCAGTTGTCAGTTTGGCGGTCTGTGCAGTCAAGTGGTTTCAATGGGCAGAAAAAAGACGACCTTTTGTTAATTGGAAAGACCTTTGCGCCCGACTTACTAAGCGTTATCATCCCTTGCGTCCAAGCGATACCCACATATGTTTCCTCAAAATCAAGCCGAAAGACATGGTTTTGGATTATTGCAAACAGTTTGAAGCGATGACTAGTTTACTTTTCGATATTTTTGAATTTGTTTTGCGCAGCACCTTCATGAAAGGTTTAAAGAAATGCATACGTATAGATGTACACCTCTTTAAACCTACTACCCTTGAGGATATGATGGAATTAGCCCAACTAGCAGAGGATAGTGCAACATACAACATGGCCCATGAGTCTAATTCGCATAGCTGGCCCATGGGTCGTGGTTTTTCAGCATCTCCCTATCGTAAACCCTCTGAGGGTGAAATCACTCGCACGATCACACTTGGTGATCGAACCCAGCGGTACCAAATCTCCCTAAAACCGCAACAACTACAAGTTTTCAGAAACAGGTGGCCACCCCCATTCATCCTCGATTCCACGCTACAAGTGCCTATTAGATGCTGA

Coding sequence (CDS)

ATGTTTCCTTATTTGTCATACTTCCCTTTTCCCTTTGTCTCGAGTGGTTGTGGTTTAGAGGTTTGCAAGGATTCTTCCACGGTTGGAGCGTGTTCAAAAGAGTTGAGTGGTATGAATCTTGCTTCAGTCCCTTCGTTATGTGGGGTTTGCTTGGAGTTAGTCACCCCAACTTCTGAAAGGCTTGGGGAATTGGATGGAATTACAGGTTCATATGGTCCTCATTTGCCTAATGGGATAAAGACTTTTTGGGAAGAGTTAGGTAGCCTCTTTGGTCTTTATGGAGATTTTTGGTGCTTAGCTGTGATAGATGGTAGTGAGAAGCGGCGATTGGTGGCAACTCATGAAATGTTGATGGCATATCGTCGCAGAAGAGATTCTGAGAAATTGGTGGTTGCAGTTGTCAGTTTGGCGGTCTGTGCAGTCAAGTGGTTTCAATGGGCAGAAAAAAGACGACCTTTTGTTAATTGGAAAGACCTTTGCGCCCGACTTACTAAGCGTTATCATCCCTTGCGTCCAAGCGATACCCACATATGTTTCCTCAAAATCAAGCCGAAAGACATGGTTTTGGATTATTGCAAACAGTTTGAAGCGATGACTAGTTTACTTTTCGATATTTTTGAATTTGTTTTGCGCAGCACCTTCATGAAAGGTTTAAAGAAATGCATACGTATAGATGTACACCTCTTTAAACCTACTACCCTTGAGGATATGATGGAATTAGCCCAACTAGCAGAGGATAGTGCAACATACAACATGGCCCATGAGTCTAATTCGCATAGCTGGCCCATGGGTCGTGGTTTTTCAGCATCTCCCTATCGTAAACCCTCTGAGGGTGAAATCACTCGCACGATCACACTTGGTGATCGAACCCAGCGGTACCAAATCTCCCTAAAACCGCAACAACTACAAGTTTTCAGAAACAGGTGGCCACCCCCATTCATCCTCGATTCCACGCTACAAGTGCCTATTAGATGCTGA

Protein sequence

MFPYLSYFPFPFVSSGCGLEVCKDSSTVGACSKELSGMNLASVPSLCGVCLELVTPTSERLGELDGITGSYGPHLPNGIKTFWEELGSLFGLYGDFWCLAVIDGSEKRRLVATHEMLMAYRRRRDSEKLVVAVVSLAVCAVKWFQWAEKRRPFVNWKDLCARLTKRYHPLRPSDTHICFLKIKPKDMVLDYCKQFEAMTSLLFDIFEFVLRSTFMKGLKKCIRIDVHLFKPTTLEDMMELAQLAEDSATYNMAHESNSHSWPMGRGFSASPYRKPSEGEITRTITLGDRTQRYQISLKPQQLQVFRNRWPPPFILDSTLQVPIRC
Homology
BLAST of Lag0007508 vs. NCBI nr
Match: XP_022897442.1 (uncharacterized protein LOC111411108 [Olea europaea var. sylvestris])

HSP 1 Score: 100.1 bits (248), Expect = 3.6e-17
Identity = 69/225 (30.67%), Postives = 109/225 (48.44%), Query Frame = 0

Query: 99  LAVIDGSEKRRLVATHEMLMAYRRRRDSEKLVVAVVSLAVCAVKWFQWAEKRRPFVNWKD 158
           + V +G++    V   E   +  R  + EKL  A V     A+ WFQW E+RRP   W+D
Sbjct: 153 MPVFEGNDPDGWVFRVERYFSVNRLSEEEKLEAAAVCFDGEALAWFQWEERRRPVKAWED 212

Query: 159 LCARLTKRYHPLRPSDTHICFLKIKPKDMVLDYCKQFEAMTSLLFDIFEFVLRSTFMKGL 218
           L A L +R+ P +       FL ++    V +Y ++FE + S L  I E V+  +F+ GL
Sbjct: 213 LKAHLLRRFRPSQEGSLCAQFLSLQQTTTVREYRRRFETLASPLLGISEEVMECSFLNGL 272

Query: 219 KKCIRIDVHLFKPTTLEDMMELAQLAEDSATYNMAHESNSHSWPMGRGFSASPYRKPSEG 278
           +  IR +V L +P  LE +ME+AQ+ ED           +H  P      + PY+ P+  
Sbjct: 273 RAEIRAEVQLLRPLGLEQIMEVAQMVED-------RNLITHQGPGPTKPKSIPYQSPNPP 332

Query: 279 EITRTITLGDRTQRYQISLKPQQLQVFRNRWPPPF--ILDSTLQV 322
           +     TL     R  +++ PQ+   F  + P  F  + DS +Q+
Sbjct: 333 Q----GTLKQNKNRIPVNILPQRPN-FVPKNPAAFKRLSDSEMQI 365

BLAST of Lag0007508 vs. NCBI nr
Match: XP_015388504.1 (uncharacterized protein LOC107178162 [Citrus sinensis])

HSP 1 Score: 97.1 bits (240), Expect = 3.1e-16
Identity = 63/210 (30.00%), Postives = 103/210 (49.05%), Query Frame = 0

Query: 99  LAVIDGSEKRRLVATHEMLMAYRRRRDSEKLVVAVVSLAVCAVKWFQWAEKRRPFVNWKD 158
           + + +G +    V   E   A     + EKL+ A + L   A+ WFQW E+R+P  +W +
Sbjct: 196 MPIFEGEDAYGWVYRAERYFAINGLSEREKLMAAALCLEGKALAWFQWREQRQPMRSWGE 255

Query: 159 LCARLTKRYHPLRPSDTHICFLKIKPKDMVLDYCKQFEAMTSLLFDIFEFVLRSTFMKGL 218
              RL +R+   +  D H  F  +  +  V++Y ++FE ++  L  + E VL   F+KGL
Sbjct: 256 FKDRLLERFQATQEGDLHEQFFALTQERTVMEYREKFELLSGRLGGLLEAVLEGNFIKGL 315

Query: 219 KKCIRIDVHLFKPTTLEDMMELAQLAEDSATYNMAHESNS------HSWPM------GRG 278
           K  IR  + L +P  L + MELAQ+ ED  T    ++S+S      +S P+        G
Sbjct: 316 KLEIRASLRLLRPRGLGESMELAQMIEDKNTIEQINKSSSVDFSYRNSTPLVGQKTQTLG 375

Query: 279 FSASPYRKPSEGEITRTITLGDRTQRYQIS 297
           F       PS G+  + + L   +QR ++S
Sbjct: 376 FQREFQNTPSGGQKMQMMGLQRDSQRDRVS 405

BLAST of Lag0007508 vs. NCBI nr
Match: EXB38291.1 (hypothetical protein L484_013924 [Morus notabilis])

HSP 1 Score: 97.1 bits (240), Expect = 3.1e-16
Identity = 56/148 (37.84%), Postives = 80/148 (54.05%), Query Frame = 0

Query: 99   LAVIDGSEKRRLVATHEMLMAYRRRRDSEKLVVAVVSLAVCAVKWFQWAEKRRPFVNWKD 158
            + V DG          E   A  +  + EKL VAVVSL   A+ WFQW + R P  +W  
Sbjct: 869  MPVFDGENPDGWSIRAERYFAMNKMTEREKLDVAVVSLEGEALAWFQWEDGRSPIRSWMV 928

Query: 159  LCARLTKRYHPLRPSDTHICFLKIKPKDMVLDYCKQFEAMTSLLFDIFEFVLRSTFMKGL 218
            L   L +R+ P++       FL ++ +  V DY +QFE + + L ++ E VL STF+KGL
Sbjct: 929  LKLMLLERFRPMQEGSLCEKFLSLRQETTVRDYRRQFEILAAPLTELSEQVLESTFVKGL 988

Query: 219  KKCIRIDVHLFKPTTLEDMMELAQLAED 247
            K  IR ++ L KP  L  +ME+AQ  E+
Sbjct: 989  KPEIRAEIRLMKPERLGRIMEVAQRVEE 1016

BLAST of Lag0007508 vs. NCBI nr
Match: XP_024017591.1 (uncharacterized protein LOC112090471 [Morus notabilis])

HSP 1 Score: 95.1 bits (235), Expect = 1.2e-15
Identity = 71/230 (30.87%), Postives = 103/230 (44.78%), Query Frame = 0

Query: 33  KELSGM--NLASVPSLCGVCLELVTPTSERLGELDGITGSYGPHLPNGI----------- 92
           KE+  M  +L  +P L    LEL+    + L +  G      P   NGI           
Sbjct: 22  KEVESMREDLGKIPRL-EQGLELLLIRMDELSKQRGPENRESPETDNGIPAEQTAPTTET 81

Query: 93  ---KTFWEELGSLFGLYGDFWCLAVIDGSEKRRLVATHEMLMAYRRRRDSEKLVVAVVSL 152
                 W E GS          + V DG      +   E   +  R  D EKL VAVVSL
Sbjct: 82  DYRPAEWREGGSCTEFRTRRVEMPVFDGENPDGWIFRAERYFSLNRLTDREKLDVAVVSL 141

Query: 153 AVCAVKWFQWAEKRRPFVNWKDLCARLTKRYHPLRPSDTHICFLKIKPKDMVLDYCKQFE 212
              A+ WFQW ++R    +W +L  ++ +R+H  +       FL +  +  V +Y +QFE
Sbjct: 142 EGEALAWFQWEDRRWAVRDWTELKRKVLERFHSTQEGTLCEKFLSLHQETTVREYRRQFE 201

Query: 213 AMTSLLFDIFEFVLRSTFMKGLKKCIRIDVHLFKPTTLEDMMELAQLAED 247
            + +LL +I E VL S F+ GLK  +R +V + KP  L  +ME  Q  E+
Sbjct: 202 MLAALLAEIPEQVLESAFVNGLKPEVRAEVRMMKPNGLGRIMEFTQRVEE 250

BLAST of Lag0007508 vs. NCBI nr
Match: RVW54082.1 (Retrovirus-related Pol polyprotein from transposon 297 [Vitis vinifera])

HSP 1 Score: 94.7 bits (234), Expect = 1.5e-15
Identity = 61/180 (33.89%), Postives = 94/180 (52.22%), Query Frame = 0

Query: 125 DSEKLVVAVVSLAVCAVKWFQWAEKRRPFVNWKDLCARLTKRYHPLRPSDTHICFLKIKP 184
           + EKLV A +SL    + W+QW + R  F +W++L  RL  R+ P +       FL ++ 
Sbjct: 140 EEEKLVAAAMSLDGDTLSWYQWTDSREVFGSWENLKRRLLLRFRPTQEGSLCEQFLAVRQ 199

Query: 185 KDMVLDYCKQFEAMTSLLFDIFEFVLRSTFMKGLKKCIRIDVHLFKPTTLEDMMELAQLA 244
           +  V  Y ++FE + + L  I + V+ STFM GL   IR ++HL +P  L  +ME+AQ  
Sbjct: 200 QRTVAAYWREFEILATPLKGISKEVMESTFMNGLLPEIRAELHLLQPYGLGHLMEMAQRV 259

Query: 245 ED-SATYNMAHESNSHSWPMGRGFSASPYR---KPSEGEITRTITLGDRT--QRYQISLK 299
           ED +     A E N  + P      +S  R   K  E   TR + +G++T  QR +I +K
Sbjct: 260 EDRNLAMRAAREPNGPNGPKSTKMLSSSNRGEWKIRENFQTRVVVVGEKTMSQRREIPIK 319

BLAST of Lag0007508 vs. ExPASy TrEMBL
Match: W9QTX5 (Mediator of RNA polymerase II transcription subunit 25 OS=Morus notabilis OX=981085 GN=L484_013924 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.5e-16
Identity = 56/148 (37.84%), Postives = 80/148 (54.05%), Query Frame = 0

Query: 99   LAVIDGSEKRRLVATHEMLMAYRRRRDSEKLVVAVVSLAVCAVKWFQWAEKRRPFVNWKD 158
            + V DG          E   A  +  + EKL VAVVSL   A+ WFQW + R P  +W  
Sbjct: 869  MPVFDGENPDGWSIRAERYFAMNKMTEREKLDVAVVSLEGEALAWFQWEDGRSPIRSWMV 928

Query: 159  LCARLTKRYHPLRPSDTHICFLKIKPKDMVLDYCKQFEAMTSLLFDIFEFVLRSTFMKGL 218
            L   L +R+ P++       FL ++ +  V DY +QFE + + L ++ E VL STF+KGL
Sbjct: 929  LKLMLLERFRPMQEGSLCEKFLSLRQETTVRDYRRQFEILAAPLTELSEQVLESTFVKGL 988

Query: 219  KKCIRIDVHLFKPTTLEDMMELAQLAED 247
            K  IR ++ L KP  L  +ME+AQ  E+
Sbjct: 989  KPEIRAEIRLMKPERLGRIMEVAQRVEE 1016

BLAST of Lag0007508 vs. ExPASy TrEMBL
Match: A0A438F372 (Retrovirus-related Pol polyprotein from transposon 297 OS=Vitis vinifera OX=29760 GN=pol_407 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 7.4e-16
Identity = 61/180 (33.89%), Postives = 94/180 (52.22%), Query Frame = 0

Query: 125 DSEKLVVAVVSLAVCAVKWFQWAEKRRPFVNWKDLCARLTKRYHPLRPSDTHICFLKIKP 184
           + EKLV A +SL    + W+QW + R  F +W++L  RL  R+ P +       FL ++ 
Sbjct: 140 EEEKLVAAAMSLDGDTLSWYQWTDSREVFGSWENLKRRLLLRFRPTQEGSLCEQFLAVRQ 199

Query: 185 KDMVLDYCKQFEAMTSLLFDIFEFVLRSTFMKGLKKCIRIDVHLFKPTTLEDMMELAQLA 244
           +  V  Y ++FE + + L  I + V+ STFM GL   IR ++HL +P  L  +ME+AQ  
Sbjct: 200 QRTVAAYWREFEILATPLKGISKEVMESTFMNGLLPEIRAELHLLQPYGLGHLMEMAQRV 259

Query: 245 ED-SATYNMAHESNSHSWPMGRGFSASPYR---KPSEGEITRTITLGDRT--QRYQISLK 299
           ED +     A E N  + P      +S  R   K  E   TR + +G++T  QR +I +K
Sbjct: 260 EDRNLAMRAAREPNGPNGPKSTKMLSSSNRGEWKIRENFQTRVVVVGEKTMSQRREIPIK 319

BLAST of Lag0007508 vs. ExPASy TrEMBL
Match: A0A438E000 (Retrotrans_gag domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_069772 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.6e-15
Identity = 62/178 (34.83%), Postives = 94/178 (52.81%), Query Frame = 0

Query: 127 EKLVVAVVSLAVCAVKWFQWAEKRRPFVNWKDLCARLTKRYHPLRPSDTHICFLKIKPKD 186
           EKLV A +SL   A+ W+QW + R  F +W++L  RL  R+ P +       FL ++ + 
Sbjct: 85  EKLVAAAMSLDGDALSWYQWTDSREVFGSWENLKRRLLLRFRPTQEGSLCEQFLAVRQQG 144

Query: 187 MVLDYCKQFEAMTSLLFDIFEFVLRSTFMKGLKKCIRIDVHLFKPTTLEDMMELAQLAED 246
            ++ Y ++FE + + L  I E V+ STFM GL   IR ++ L KP  L  +ME+AQ  ED
Sbjct: 145 TMVAYRREFEILATPLKGISEEVMESTFMNGLLPEIRAELRLLKPYGLGHLMEMAQRVED 204

Query: 247 -SATYNMAHESNSHSWPMGRGFSASPYR---KPSEGEITRTITLGDRT--QRYQISLK 299
            +     A E N  + P      +S  R   K  E   TR + +G++T  QR +I +K
Sbjct: 205 RNLAMRAACEPNGPNGPKSTKMLSSANRGEWKIGENFQTRAVAVGEKTMSQRREIPIK 262

BLAST of Lag0007508 vs. ExPASy TrEMBL
Match: A0A5A7T8L1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00950 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.2e-15
Identity = 60/184 (32.61%), Postives = 97/184 (52.72%), Query Frame = 0

Query: 125 DSEKLVVAVVSLAVCAVKWFQWAEKRRPFVNWKDLCARLTKRYHPLRPSDTHICFLKIKP 184
           + EKL +AVVSL    + WF+WAE R+ F +W++L  R+  R+           FL IK 
Sbjct: 128 EREKLEIAVVSLEGRGLNWFRWAENRKRFRSWRELKERMYNRFRCRDFGTACARFLAIKQ 187

Query: 185 KDMVLDYCKQFEAMTSLLFDIFEFVLRSTFMKGLKKCIRIDVHLFKPTTLEDMMELAQLA 244
           +  V +Y ++FE +++ L ++ E VL  TF  GL   IR +V   +   LED+ME AQLA
Sbjct: 188 EGTVSEYLQKFEELSAPLPEMAEEVLEGTFTNGLDPRIRKEVFSMRAVGLEDLMEAAQLA 247

Query: 245 EDSATYNMAHESNSHSWPMGRGFS-----ASPYRKPSEGEITRTITLGDRTQRYQISLKP 304
           E+ A ++   +   +S+P  +  +     +SP  K +E   T+ +TL ++      +   
Sbjct: 248 EEKAEWS---KGGPNSYPFSKEMAKTTLGSSP--KMTETPTTKMVTLAEKVVNQTSNSNT 306

BLAST of Lag0007508 vs. ExPASy TrEMBL
Match: A0A5A7UPF5 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002750 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 8.1e-15
Identity = 65/214 (30.37%), Postives = 106/214 (49.53%), Query Frame = 0

Query: 99  LAVIDGSEKRRLVATHEMLMAYRRRRDSEKLVVAVVSLAVCAVKWFQWAEKRRPFVNWKD 158
           + V +G + +      E         + EKL +AVVSL    + WF+WAE R+ F +WK+
Sbjct: 102 MPVFNGEDPKGWFYRAEHYFQMHLLNEREKLKIAVVSLEGRGLNWFRWAENRKRFRSWKE 161

Query: 159 LCARLTKRYHPLRPSDTHICFLKIKPKDMVLDYCKQFEAMTSLLFDIFEFVLRSTFMKGL 218
           L   +  R+       T   FL IK +  + +Y ++FE +++ L ++ + VL+ TF  GL
Sbjct: 162 LKEGMYNRFRCREYGTTCARFLAIKQEGSMREYLQKFEELSAPLPEMAKEVLKGTFTNGL 221

Query: 219 KKCIRIDVHLFKPTTLEDMMELAQLAEDSATYNMAHESNSHSWPMGRGFSASPYRKPS-- 278
              IR +V   +   LED+ME AQLAE+ A      +   + +P  +  +A  Y +PS  
Sbjct: 222 DPGIRKEVFSMRVVGLEDLMEAAQLAEEKAEVT---KGGPYPYPYSKE-AAKSYLRPSPK 281

Query: 279 --EGEITRTITLGDRTQRYQISLKPQQLQVFRNR 309
             E   T+ +TL ++    Q S K  +    +NR
Sbjct: 282 IFESPPTKMVTLAEKVVN-QTSFKRSKGHCCKNR 310

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022897442.13.6e-1730.67uncharacterized protein LOC111411108 [Olea europaea var. sylvestris][more]
XP_015388504.13.1e-1630.00uncharacterized protein LOC107178162 [Citrus sinensis][more]
EXB38291.13.1e-1637.84hypothetical protein L484_013924 [Morus notabilis][more]
XP_024017591.11.2e-1530.87uncharacterized protein LOC112090471 [Morus notabilis][more]
RVW54082.11.5e-1533.89Retrovirus-related Pol polyprotein from transposon 297 [Vitis vinifera][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
W9QTX51.5e-1637.84Mediator of RNA polymerase II transcription subunit 25 OS=Morus notabilis OX=981... [more]
A0A438F3727.4e-1633.89Retrovirus-related Pol polyprotein from transposon 297 OS=Vitis vinifera OX=2976... [more]
A0A438E0001.6e-1534.83Retrotrans_gag domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_069... [more]
A0A5A7T8L16.2e-1532.61Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7UPF58.1e-1530.37Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 132..219
e-value: 4.0E-5
score: 23.8

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0007508.1Lag0007508.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043170 macromolecule metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0044238 primary metabolic process