Lag0007067 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0007067
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr6: 48453727 .. 48458772 (-)
RNA-Seq ExpressionLag0007067
SyntenyLag0007067
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGGGTGGGCGGAGTAGGCGGAGAGATCCTCCTTGGAGGCGTAGCGGCTGTGAAGGAGGTGAGTGAAATTGGAGGCGGAGGAGCGGTTGCGGAGAAGGGGACCGGCGGAGAGATGGAGGACTTGGTCGAGGGAGACGAGGCCATTGAGGCCGGCGAGCATGTGGGTCGAATCGACGCCGTCTTTAACCTTGAAGAGGACGACGTGTTCGATTGGGTGAGTGTGAGTGGACATGTTGAGGGAGAAGGGTTTGAAGGAGGGACGAGGGTTTGGTCGGAGGCGGAGGTGTCTGTAAGGAAGCGTGGAGAAAGTCCGGAGAGCAAAGGCGAGCATTTCAACGCCAAATCAGAATCAGAGAATTTGAGCGACACTGACAGGGACGTGCTGCGCAGTGCGTTCACCGCCAACCATACACCAAAGAACTCCTAAAATATCAATCATCATATCACGCGAAATCATGTCCCGTTCATTTAGTTCTTAACCTGAAGTATCTAATACTTATCTAATATAAAAAAACAATGATACTACATATCCGTTAGTGTTTGGACGACAACCGTCTGATCCTACTACATTTAGTTACCAAGAAACTTGTAAGATTAGGTGGCCACTTGGATTGAACTTATTTCTTTTAAGTCTTTTATTTTTTATATAGCCTTATTGACTACTAGGGTCAATCCATGATAGTTCATTATTGGAATATTTTAACCTGATAATTGTCATATTTGCAAATATAATAATGAGATTATGGCCAACTTCAGACACTATAATCTTAACCAAAACATCAAAGCTCCAAATTAACAAAAATAAATGTAACAAAATGATGACTTTGTACATGATTGAAGTTACTTGGATTTAACCTCCTATTCCTATTTAAACTTTGTCAAACCACCATCAGAGCTCCAATTATTTAGTTTGATAATATTAGTACTCTATCACTTGCATTTAATCTTATGTTTGACTAAAGGAGCAAGCATGTAGCAAACAACTTAACGTTCACCATCCTAGTATCAATTAGCAAATAGACTCTCTCTATGCAACAACTTGCTTCACATACCTAAGACAAAATCTTAGTGTGATATCATCGCCCTCTCGTTTTAATGAGATGTTAAAATGTCACATCATATTATAAATGATGTAGCGGTGCATGTCCTAATCATGTCTTTTGTCAACTAAGGAAGAATGAAATACCTTAAAGAAAGCAAACAACAAAGAAAAAGCTTCGTGACACTTATGAATGTTTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTAATTTCTTCATCATGGTTTTCATTTTTTTTAAAGACACTTGAATTCCTAACCAAATTTTAAAAATAAAAACAAGTTTTTGAAGACTAATATTTTTAGTTTTAAAAAATTGGCTTGGTTTTTTAAAATGGAAGGAAGGTAGATGAAAAAAAAAAGAAACTTAGAGTTGAAAGATGTGTCTAAAAACCAAAAACCAAAGGGTTATCAAACTTGTTAAGTATTACCATTGATGATTGACTTTAATACCCAAATAGTAGTATAAAAACCACGACATATACTGATTTTCCTGTTTTTTCTTCCGGCGTCTTATTCCGTCCTCAGTCGCTTCCCTTCAGCGAACGAAGGTCAGTGGACTCGGTCGAGTCTCCGGCAGACTCGCTTCCTCAAGCCAACATCAGTATGCTCAAGTGAGTATCCGACGTCCATTCTCTAATATTCTTCACAGAATCGGCTCATGAATAAAATTAAGAAAGTGGATTTTAACTGTAATGTTGGGCGATCGAAGCATCATTTCTCATATTCCTGTCATGTTTGTGTCGTATATCTATTCTGTCACTGTTCGTCTTCTTTTTTTCTGTCGAAGATCACGAGAGTATTAACTGGAGTGAATGCAATAATATTATCAGCAAGCCGAATTGAGTTCCCAAATGATGACCGCTTTGGCGCTGGATTTTGCCCGAGCCGTCATGTTTGGAGATAAAGATCACTGTCGCCACTCCTATCTTCGTGATTTTAGCCTACTTCTTTCAGGTTTTGTATGAATTGACGTCCATATCACTATGATCACTGTGTCATGGCCGTTTTGTTTCTCTCTTGGCTTTGACATACTAGTTCCTCCCTAACAAGTTTGAGCTTATGTTTTCCCCGAGTGATGAAATGAAATCCACCTCTGCATAACTCTTGGCTTTGATCTGTACCAAGTTCATTTTTACAATCTTGATATTTGACTGTATGTAGTATTTGGCATGATATACGAAGTTACTCATCCTTTAGGCTTCATGGAAATAATGGCGTAATTAGCGGCATGTGTATTCATATGAATGTTATTTCATTATTGCTCACGGGCTCAATTTTGTTGGCAATTACATCCTCCACTTGGACATGGGGAAAAGGTCATATAGACATATTTAACAACTCTGCTGAATATATCTTATGATAAAGAATGCATTATATATATTTCGTGGTTTGTATTTGCTTCTCATTCGTTTTCCCTTTTCTCTTGAAGATCACAAGAACAGAGTATTGCATTCCTGAAGGATTTGTGAGGCATGAAACCTGATAATTTCCTCATGGGCATAAAGCAAATTAGGTGATGGTGGTTTTTATTAAAATAGAATGAAAAAAAAAATTATAAATATAAAGTTCATTCTTATGGTTGCGAATTTCTTCTTAGTGGTTTCCTGTAGCTCACTTCATTTAGTCATATACCATCTTATTGAATCAAAATATCTGAGTAAATTCATTTCAAGATTTAGTCTCTTGCCATATTTTCTTTTTGGTTGTGTATAACATTCTAAACTTTGTTGCATTATCAGGTTTACATAATTGATTTTGGATCAGCAAAAAAGATAGCCAAATACAACTACCGAACAATATAGTTGGTTTACCTTGCTACATCTTATTTTTCTCGTGTTGCTGGCTGTCTCACAGGTTTGCCATTTCTCGATGTTTATTGCATGTTCCCTCTATAGCTTGGCCTATTTTGTGGAGCATAATACGGATATTTGTATATGATACTTATATGAACTAATCATGATTTCCTAACATGTCTGCTCTCAAATGTTTTTAGATCATGTTAAAATCCTCCCTTGAAAATATTCAACGTTCAGAATGATACACTGTATTAAACTTTTAGTTTTAGTAGTATGAATAATTCATCTAAGTGATATTTCTACAATTTCCCCCCATAAATTTGAAATATAACCAATAGATGGACTGTTTGGGGCCCAATCCTATATAACCAAACACGTGAACTGTTTGAGGCCCAATCATAGTAGAGTAGTAATAATTTTTCTTATTGAATGCAGTAACCAAAATAGGAATATTAGTTACTATAAATGCCATTCAGTCTTAATTCTATCCCACATGTTGATATTATGTTGACTGGTCTGCTCATTGAAGGATACTCTCTATTATCTCCTTTGTGGCTGTCTGTTCAAAGGCAAAGGCCTTATTTTATGGTAGAATGTTGTTAGCGACTTATCACACTGATGTTGCAGTTACGTTTTATTTTTTTGGGTGGAAAGAAAAGAGAATGTTTACTTGTGAGATTGGAAGGAGAAACTTTATTTGAGATTAATAATTTGGATTGCTCTCACTCGGCAAAGCTTGTGCTCCGAGTTCTTTTACAATTGCTCTTTCATCTGTGATTGCTTCCTATTGGGATTTTTTTATAAAAAAAATATATATATATATGGGAAAACCCTAGGTCTGATATGATTTTCTTTTTATGTTTATATGAACTAAATTCCCAATTATGTTTGTTCTCAAATCTTCTTGAATCGCAATATAGTCCTCCTATTGAAATATTAAACATTGAAAATGATTAGGATTACTGTTTTCATTTTTTAGTTTTAGTCATATGAAAAGTTCAATTGATATTGAATATTGAAAATCATTTATTTGTGCATGAAGGTGATGTTATTTGCTGCAAGTGACAGATGATAACAATAACTGTCTCATATGATGTTATAGTGGTTTATCATATTCCTTGTCCATGTCAGTCTCTGCTATTATTACATGTTTGAGACATCTTCCATGACTGACTTGTAGTTTCTTGTCTCATTTGTTTTCCTTTTGGTCTTGAAGCTCAAGAGAATAGAGGCATGAAACCTTCCTCTCCTCTTGCGTCTTGGACTTCAAGCAAATCAGGTGATGGTTATATAATAAAATGTTTGTTCTTACTTTTAATCAATCACTTCTTTCTTGCCAGCTTTTCTTTCTTGGTTGGTGTATAACATTCTAAACTTTGTTGCCTTCTCAGGTTTTCATAATTGATTTGGATTGCAAAAAACAATGGATATAATTGGTTTACCTTGCTGCATCTCATTTTGCTTGAATTGCTGGTTGTCTCACAAGTATGTTATTTCTCGATGTTTATTGCATGTGACCACTGTAGCTTGGCCTGTTGTGTGAAACATTATACTGATATTCATACATGTTATATAAACTAATCATAATTTCCTAACATGTTTGCTCTCAAATCTTTTTAGATCTCGTTAAAATCCTTGTTCGTTTTTTTTTTTTGAGTTCGTTAAAAACCTCGTTTGAAAATATTTAACATTGAAAATGATATACTATTTTTAACTTTTAGTTTTGACATAACCAACATATGAACTGTTTGGGCCCCAATCATATTGGACTAGCAATAACTTTATAATGGGTTGCAGTTATCAAAATGGGAATATGTCAGTTACTGTAAATGCCATTCATTTTTAATTCTATCTGACATGTTGATATTATGTTGACTGCTCTGCTCATTGAACAATACTATCTAATTTATCCTTTGTGGATGTTTGTTAAAAGGCAAGGGCCTCATTTTATGGTAGAATGTTGTTAGCAACTTATCACATAGATGTTGTAGTTATGTTTTATGTATTTACTATTATTATTTTGGTTTGTTTTGGTGTTAAGAAAATGGAACGTCTACTTGTGAGATTGGAAGGAGGAATTTTATTTGGGATTTAGAATTTGGATTGATTCCATTTGACGGAGCTTGTTCTCCAAGTAAGGATCTGATGTGTAAAGAAGATGATCAGATAAATGAGGTAGAGTAA

mRNA sequence

ATGGCTCGGGTGGGCGGAGTAGGCGGAGAGATCCTCCTTGGAGGCGTAGCGGCTGTGAAGGAGGTGAGTGAAATTGGAGGCGGAGGAGCGGTTGCGGAGAAGGGGACCGGCGGAGAGATGGAGGACTTGGTCGAGGGAGACGAGGCCATTGAGGCCGGCGAGCATGTGGGTCGAATCGACGCCGTCTTTAACCTTGAAGAGGACGACGTGTTCGATTGGGTGAGTGTGAGTGGACATGTTGAGGGAGAAGGGTTTGAAGGAGGGACGAGGGTTTGGTCGGAGGCGGAGGTGTCTGTAAGGAAGCGTGGAGAAAGTCCGGAGAGCAAAGGCGAGCATTTCAACGCCAAATCAGAATCAGAGAATTTGAGCGACACTGACAGGGACGTGCTGCGCATCGCTTCCCTTCAGCGAACGAAGGTCAGTGGACTCGGTCGAGTCTCCGGCAGACTCGCTTCCTCAAGCCAACATCAGTATGCTCAACAAGCCGAATTGAGTTCCCAAATGATGACCGCTTTGGCGCTGGATTTTGCCCGAGCCGTCATGTTTGGAGATAAAGATCACTGTCGCCACTCCTATCTTCGTGATTTTAGCCTACTTCTTTCAGCTCAAGAGAATAGAGGCATGAAACCTTCCTCTCCTCTTGCGTCTTGGACTTCAAGCAAATCAGAAAATGGAACGTCTACTTGTGAGATTGGAAGGAGGAATTTTATTTGGGATTTAGAATTTGGATTGATTCCATTTGACGGAGCTTGTTCTCCAAGTAAGGATCTGATGTGTAAAGAAGATGATCAGATAAATGAGGTAGAGTAA

Coding sequence (CDS)

ATGGCTCGGGTGGGCGGAGTAGGCGGAGAGATCCTCCTTGGAGGCGTAGCGGCTGTGAAGGAGGTGAGTGAAATTGGAGGCGGAGGAGCGGTTGCGGAGAAGGGGACCGGCGGAGAGATGGAGGACTTGGTCGAGGGAGACGAGGCCATTGAGGCCGGCGAGCATGTGGGTCGAATCGACGCCGTCTTTAACCTTGAAGAGGACGACGTGTTCGATTGGGTGAGTGTGAGTGGACATGTTGAGGGAGAAGGGTTTGAAGGAGGGACGAGGGTTTGGTCGGAGGCGGAGGTGTCTGTAAGGAAGCGTGGAGAAAGTCCGGAGAGCAAAGGCGAGCATTTCAACGCCAAATCAGAATCAGAGAATTTGAGCGACACTGACAGGGACGTGCTGCGCATCGCTTCCCTTCAGCGAACGAAGGTCAGTGGACTCGGTCGAGTCTCCGGCAGACTCGCTTCCTCAAGCCAACATCAGTATGCTCAACAAGCCGAATTGAGTTCCCAAATGATGACCGCTTTGGCGCTGGATTTTGCCCGAGCCGTCATGTTTGGAGATAAAGATCACTGTCGCCACTCCTATCTTCGTGATTTTAGCCTACTTCTTTCAGCTCAAGAGAATAGAGGCATGAAACCTTCCTCTCCTCTTGCGTCTTGGACTTCAAGCAAATCAGAAAATGGAACGTCTACTTGTGAGATTGGAAGGAGGAATTTTATTTGGGATTTAGAATTTGGATTGATTCCATTTGACGGAGCTTGTTCTCCAAGTAAGGATCTGATGTGTAAAGAAGATGATCAGATAAATGAGGTAGAGTAA

Protein sequence

MARVGGVGGEILLGGVAAVKEVSEIGGGGAVAEKGTGGEMEDLVEGDEAIEAGEHVGRIDAVFNLEEDDVFDWVSVSGHVEGEGFEGGTRVWSEAEVSVRKRGESPESKGEHFNAKSESENLSDTDRDVLRIASLQRTKVSGLGRVSGRLASSSQHQYAQQAELSSQMMTALALDFARAVMFGDKDHCRHSYLRDFSLLLSAQENRGMKPSSPLASWTSSKSENGTSTCEIGRRNFIWDLEFGLIPFDGACSPSKDLMCKEDDQINEVE
Homology
[Close]
BLAST of Lag0007067 vs. NCBI nr
Match: PON81635.1 (hypothetical protein TorRG33x02_225890 [Trema orientale])

HSP 1 Score: 57.8 bits (138), Expect = 1.7e-04
Identity = 40/93 (43.01%), Postives = 60/93 (64.52%), Query Frame = 0 

Query: 1  MARVGGVGGEILLGGVAAVKEVSEIGGGGAVAEKGTGGEMEDLVEGDEAIEAGEH---VG 60
          M RV  V  E++L  V A+++VSE+ G G+V E+ +GGE+EDLVEG +A+E  +H   +G
Sbjct: 1  MGRVLRVSVEVVLRAVPAMEQVSEVEGRGSVPEEWSGGEVEDLVEGFQAVEPVDHGVDLG 60

Query: 61 RIDAVFNLEEDDVFDWVS---VSGHVEGEGFEG 88
           +  V +LEE+DV D +S   + G     G+EG
Sbjct: 61 WVGVVSDLEENDVLDGLSHCYLGGESARIGYEG 93

[Close]
BLAST of Lag0007067 vs. NCBI nr
Match: PON54836.1 (hypothetical protein PanWU01x14_192020 [Parasponia andersonii])

HSP 1 Score: 55.5 bits (132), Expect = 8.5e-04
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 1   MARVGGVGGEILLGGVAAVKEVSEIGGGGAVAEKGTGGEMEDLVEGDEAIEAGEH---VG 60
           M RV  V  E++L  V A+++VSE+ G G+V E+ +GGE+EDLV+G +A E  +H   +G
Sbjct: 122 MGRVLRVSVEVVLRAVPAMEQVSEVEGRGSVPEEWSGGEVEDLVQGFQAAEPVDHGVDLG 181

Query: 61  RIDAVFNLEEDDVFDWVS---VSGHVEGEGFEG 88
            +  V +LEE+DV D +S   + G     G+EG
Sbjct: 182 WVGVVSDLEENDVLDGLSHCYLGGESARVGYEG 214

[Close]
BLAST of Lag0007067 vs. ExPASy TrEMBL
Match: A0A2P5E7X0 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_225890 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 8.3e-05
Identity = 40/93 (43.01%), Postives = 60/93 (64.52%), Query Frame = 0 

Query: 1  MARVGGVGGEILLGGVAAVKEVSEIGGGGAVAEKGTGGEMEDLVEGDEAIEAGEH---VG 60
          M RV  V  E++L  V A+++VSE+ G G+V E+ +GGE+EDLVEG +A+E  +H   +G
Sbjct: 1  MGRVLRVSVEVVLRAVPAMEQVSEVEGRGSVPEEWSGGEVEDLVEGFQAVEPVDHGVDLG 60

Query: 61 RIDAVFNLEEDDVFDWVS---VSGHVEGEGFEG 88
           +  V +LEE+DV D +S   + G     G+EG
Sbjct: 61 WVGVVSDLEENDVLDGLSHCYLGGESARIGYEG 93

[Close]
BLAST of Lag0007067 vs. ExPASy TrEMBL
Match: A0A2P5C1E2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_192020 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.1e-04
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 1   MARVGGVGGEILLGGVAAVKEVSEIGGGGAVAEKGTGGEMEDLVEGDEAIEAGEH---VG 60
           M RV  V  E++L  V A+++VSE+ G G+V E+ +GGE+EDLV+G +A E  +H   +G
Sbjct: 122 MGRVLRVSVEVVLRAVPAMEQVSEVEGRGSVPEEWSGGEVEDLVQGFQAAEPVDHGVDLG 181

Query: 61  RIDAVFNLEEDDVFDWVS---VSGHVEGEGFEG 88
            +  V +LEE+DV D +S   + G     G+EG
Sbjct: 182 WVGVVSDLEENDVLDGLSHCYLGGESARVGYEG 214

The following BLAST results are available for this feature:
BLAST of Lag0007067 vs. NCBI nr
Match NameE-valueIdentityDescription
PON81635.11.7e-0443.01hypothetical protein TorRG33x02_225890 [Trema orientale][more]
PON54836.18.5e-0441.94hypothetical protein PanWU01x14_192020 [Parasponia andersonii][more]
BLAST of Lag0007067 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0007067 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P5E7X08.3e-0543.01Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_225890 PE=4 SV... [more]
A0A2P5C1E24.1e-0441.94Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_192020 PE... [more]
BLAST of Lag0007067 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0007067.1Lag0007067.1mRNA