Lag0006930 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACCAATCTTCTCACCTTCCGCCCCGTCGGAATCCGACCATCCGCCGCCGCGGATCCCCGAAAACCCGATCCCGACCTCCATTTCAGGCTCTGGTGGAGGCCTGGCCAGTCGGAGCGGCAGAGATCGGAGTCGGATTCGGAATCGGGAGAGAAGGCGGCGGGATCTCGATTCTCTCCCGGTTGCTTCACGGCGGAGAAGGCGAGGAAGCTTCGAATAGTGACGACGAAGGGCAATTCGTTTCACGACGCCATGTATCATTCGGCGATCGCATCTCGTTTGGCTTCCGATTTCTCGAACACGAACAATAATCAGGCTCGGATTCTCAAGTGA ATGGCCACCAATCTTCTCACCTTCCGCCCCGTCGGAATCCGACCATCCGCCGCCGCGGATCCCCGAAAACCCGATCCCGACCTCCATTTCAGGCTCTGGTGGAGGCCTGGCCAGTCGGAGCGGCAGAGATCGGAGTCGGATTCGGAATCGGGAGAGAAGGCGGCGGGATCTCGATTCTCTCCCGGTTGCTTCACGGCGGAGAAGGCGAGGAAGCTTCGAATAGTGACGACGAAGGGCAATTCGTTTCACGACGCCATGTATCATTCGGCGATCGCATCTCGTTTGGCTTCCGATTTCTCGAACACGAACAATAATCAGGCTCGGATTCTCAAGTGA ATGGCCACCAATCTTCTCACCTTCCGCCCCGTCGGAATCCGACCATCCGCCGCCGCGGATCCCCGAAAACCCGATCCCGACCTCCATTTCAGGCTCTGGTGGAGGCCTGGCCAGTCGGAGCGGCAGAGATCGGAGTCGGATTCGGAATCGGGAGAGAAGGCGGCGGGATCTCGATTCTCTCCCGGTTGCTTCACGGCGGAGAAGGCGAGGAAGCTTCGAATAGTGACGACGAAGGGCAATTCGTTTCACGACGCCATGTATCATTCGGCGATCGCATCTCGTTTGGCTTCCGATTTCTCGAACACGAACAATAATCAGGCTCGGATTCTCAAGTGA MATNLLTFRPVGIRPSAAADPRKPDPDLHFRLWWRPGQSERQRSESDSESGEKAAGSRFSPGCFTAEKARKLRIVTTKGNSFHDAMYHSAIASRLASDFSNTNNNQARILK Homology
BLAST of Lag0006930 vs. NCBI nr
Match: XP_022998955.1 (uncharacterized protein LOC111493481 [Cucurbita maxima]) HSP 1 Score: 134.8 bits (338), Expect = 4.5e-28 Identity = 70/118 (59.32%), Postives = 83/118 (70.34%), Query Frame = 0
BLAST of Lag0006930 vs. NCBI nr
Match: KAG7030406.1 (hypothetical protein SDJN02_08753, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 128.6 bits (322), Expect = 3.2e-26 Identity = 68/116 (58.62%), Postives = 81/116 (69.83%), Query Frame = 0
BLAST of Lag0006930 vs. NCBI nr
Match: KAG6599416.1 (hypothetical protein SDJN03_09194, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 125.9 bits (315), Expect = 2.1e-25 Identity = 67/116 (57.76%), Postives = 80/116 (68.97%), Query Frame = 0
BLAST of Lag0006930 vs. NCBI nr
Match: EOY30955.1 (Uncharacterized protein TCM_037996 [Theobroma cacao]) HSP 1 Score: 102.8 bits (255), Expect = 1.9e-18 Identity = 58/128 (45.31%), Postives = 78/128 (60.94%), Query Frame = 0
BLAST of Lag0006930 vs. NCBI nr
Match: XP_007013336.2 (PREDICTED: uncharacterized protein LOC18588698 [Theobroma cacao]) HSP 1 Score: 102.4 bits (254), Expect = 2.5e-18 Identity = 58/128 (45.31%), Postives = 78/128 (60.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|