Lag0006892 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0006892
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	thylakoid lumenal 16.5 kDa protein, chloroplastic
Location	chr6: 46866223 .. 46869262 (+)
RNA-Seq Expression	Lag0006892
Synteny	Lag0006892

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACATCCTTCCTATCAACAGCAAACACATTCTATTCTTCCACACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCATTGCTGAGATCAAGATTTGGTTGCCTTCATTGCCATAACAACACTAGAAAACTGGTTATCTGCAAGGCAAATAATGACCCACCATTGCAAATTCCAGCATTAACCAAGAGAAGCCTTTCAATATGCTTCATTTCCAGTTTCATTTTCCCTCTTGTGGGTCAAGGTTTTTCCGATGCAAATGCTGCGATTCTTGAAGCTGATGATGATGAAGAGCTTTTGGAAAAGGTGAAGAAAGATAGAAAGAAGAGGCTCGAAAGGCAAGGGGTTATCAATTCTGCCAATAAAGAAAAAGGTTCCTTATGCATTCTATCTGTTTGTGTTTAGTTCTCTGTGAACTCTGAGCTTGGAAATTTGATTGAATACTGAATATGGTCTGGTTTTCAATTGGGTTTTTGCAGTTGTTTGAGTTGATTTGTGTTCGTTTGATTTTGAGTTGCGAAATAGTTCCTTCTAGTTATTGCATCTTGTTTTTCTTGCAACTGTAACAATGAAATGTCAGAGCACATAACACAATCTTTTTTTTGTGTGGTGATCATTAACATTGTTTTATGGTAGAGGAGGATTTTGAGATTTAGTAGTTAGGAAAACTCCATGGAAAACAAGAAAAGGAAACAATGTGAAACAAATTACTTAGTGCTTTCTGTGAATCTAGAACTCCAATTGCGGGAAAGAGCGAATTGAACAATACATAAATGGACTGGAAATGAGAAAAAAGAATTGTGGAGAAAAACAAGAAGAATAGCTAAGGCCCGTTTGATAACCATTTGGTTTTTGGTTTTTGGTTTTTGAAAAATAAGGTTATACACACATACTTCCACCTATAAGTTTCTTGGTTTTAGTATCAATCTTCTACCTTGTTTTCAAAAACCAAGTCCAATTTTGGAAACAAAAAAAAAGTAGTTTTCAAAAACTTGTTTTTGTTTTTAAAAATTTGGCTAGTAATTCAAATGCAACCTTAACTAGGATGAAAGCCATGGTAGAGAATTTAGGAGAGAAAACAAACATAATTTTCAAAAACCAAAAAACAAAAAATCAAATGGTTATCAAACGGAGCCTTAGTTTTTAATGAACGTAATTCACCATATAGTGATATACATACACCATCCGTAGTGATGGTAGTTATTTTTCCTATTGGTAAATGAAAAGATACATTCAATCATAGAGAGATTTGAAAAGTAATTTATTCATACCCATGAATATCAATATTCTTAGCATAACTTTAAAAGGTATTTGAATGGTTGGTTGTGTTTGTATAGCCTAAGAGTTCTGAAGCCAAGCATATGTGTGCAATGTGGGCATCCTTATCCCCTAGGTCGTAGGTTTGTAAACCTAAAGGCTAATGTGTGCAATGTGGGCTTCCTTATCCCCTAGGTTGTAAATTAAATTTTCAAACTCACTCTTCAAGCTATGCACTTACTGTTGCAAATTACAAACCCACAAGTCAAACACACGCTATATAAACTCAAGTTTCTATAACGATCCTTCTTTGTATAATCCAAATACCTTTTCAACCTCATTTGATGATATCTATATTATTGAAGTAGTGAGTCAAACAATGCTTTAAGAGGTTTAATATGGTCTTGGTTTTGGAAATCATGAGGCTTAATTCTTCATGTGAGTGGATTACAAGTGTTGTTGCAGTCAACTCAATCATAAAGTTCAATATAAGCTACCAGAGTTAAGCTATGAGAAGACCTCTAAAACAAGTAGAAACCTTGCCATAAATATAATGAACTGGTCTTTTGCAGGATACCTCCAGGAAGTTGTGTACAAGCTGAGCAAAGTAGGTCAAGCCATTGATAACAATGACTTCTCAACAGCAAGTTCAGTTCTTGGGAGTAGTAGCGATGCAGATTGGGTTCAGAACGCCAATTTAGCCTTCAACAAGGTTAGCATAATATGTATAATCAGGAATCAGGATTGTTTATGTATTACTTTGTGGAAGTTCTGACTTCTGGCTAGAATGTACATTTTATCCCTGAACCTACTATTTCCAAGTTGGTTCACAAAGTTCTAAAAGTTTTCGATATACCCTCAAACTTATTTAATTGTTAGTCCCAATGTTTTTGAAAAAAATGATCGAAAACATGACCTGATGTGTTATATTTAGTATACAAATTTAAACAAGTGCGCCTAGACATATGATAGCATGGATTCTATATCGCAGTACATGGAAAAGTATGATTTTGTATGAATTTTTAACTTCGATAAATTTTGTGAAAATGATGTAAGTTATCAAAATTCCATTGTAATTAATGTCTTGGTTTCTTTTAAGCACATCAATCAAGCTCAATGTATAGCATCATACACTTCATTTTTTGAAACAAAGTAGGACGAAGATCATCTTCTAAAAGAAACAATTCATCAGGACGAAGACCATCTTTTTTTTAAAAAAAAAAAAAAAATCATTAGTCTAAGATAATGTTCAAAATTTCAGATTTTAAAGACAAAATTGAAAACAAGCATGTTATTTAGGGACAAAACATATATTCAAGCCTTAATTGAACTAGTTCATCTTTCTAGCTAGCAACTAATTTGATGCGATAAGATGAATGAAATTATCACAACTTAAATAATTGAACTTTAATTGTTTGTCAAATTGTCATGTCGTGAGTAGTTAAATGATTCTTTGAGGAATTTCTGACTTTTAACTTCTTGAGCAGCTGAGCTCAAGTCCTGAAGAGAAATCTGAGGTGGATACATTCAACTCCTCTCTAGCTTCGTTAATCTCATCAGGTATCTTTTAAAGATATAATGCAGTAGCCAAGATAAACAGAATCTAAATTTTTGCACAGGATAAAACTACTGATTCTAAGTCATATAATATTTTTGCACTGCAGTTACTCAGAATGATGTTGAATCCTCCAAAACTGCCTTTGTAGCATCTGCCACTGCACTTGAGAAATGGACAGCCTTGGCAGGGCTTGTTGGACAGCTGAAGGGGCTTTGA

mRNA sequence

ATGGCTACATCCTTCCTATCAACAGCAAACACATTCTATTCTTCCACACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCATTGCTGAGATCAAGATTTGGTTGCCTTCATTGCCATAACAACACTAGAAAACTGGTTATCTGCAAGGCAAATAATGACCCACCATTGCAAATTCCAGCATTAACCAAGAGAAGCCTTTCAATATGCTTCATTTCCAGTTTCATTTTCCCTCTTGTGGGTCAAGGTTTTTCCGATGCAAATGCTGCGATTCTTGAAGCTGATGATGATGAAGAGCTTTTGGAAAAGGTGAAGAAAGATAGAAAGAAGAGGCTCGAAAGGCAAGGGGTTATCAATTCTGCCAATAAAGAAAAAGGATACCTCCAGGAAGTTGTGTACAAGCTGAGCAAAGTAGGTCAAGCCATTGATAACAATGACTTCTCAACAGCAAGTTCAGTTCTTGGGAGTAGTAGCGATGCAGATTGGGTTCAGAACGCCAATTTAGCCTTCAACAAGCTGAGCTCAAGTCCTGAAGAGAAATCTGAGGTGGATACATTCAACTCCTCTCTAGCTTCGTTAATCTCATCAGTTACTCAGAATGATGTTGAATCCTCCAAAACTGCCTTTGTAGCATCTGCCACTGCACTTGAGAAATGGACAGCCTTGGCAGGGCTTGTTGGACAGCTGAAGGGGCTTTGA

Coding sequence (CDS)

ATGGCTACATCCTTCCTATCAACAGCAAACACATTCTATTCTTCCACACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCATTGCTGAGATCAAGATTTGGTTGCCTTCATTGCCATAACAACACTAGAAAACTGGTTATCTGCAAGGCAAATAATGACCCACCATTGCAAATTCCAGCATTAACCAAGAGAAGCCTTTCAATATGCTTCATTTCCAGTTTCATTTTCCCTCTTGTGGGTCAAGGTTTTTCCGATGCAAATGCTGCGATTCTTGAAGCTGATGATGATGAAGAGCTTTTGGAAAAGGTGAAGAAAGATAGAAAGAAGAGGCTCGAAAGGCAAGGGGTTATCAATTCTGCCAATAAAGAAAAAGGATACCTCCAGGAAGTTGTGTACAAGCTGAGCAAAGTAGGTCAAGCCATTGATAACAATGACTTCTCAACAGCAAGTTCAGTTCTTGGGAGTAGTAGCGATGCAGATTGGGTTCAGAACGCCAATTTAGCCTTCAACAAGCTGAGCTCAAGTCCTGAAGAGAAATCTGAGGTGGATACATTCAACTCCTCTCTAGCTTCGTTAATCTCATCAGTTACTCAGAATGATGTTGAATCCTCCAAAACTGCCTTTGTAGCATCTGCCACTGCACTTGAGAAATGGACAGCCTTGGCAGGGCTTGTTGGACAGCTGAAGGGGCTTTGA

Protein sequence

MATSFLSTANTFYSSTPSSSSSSSSSSSPPLLRSRFGCLHCHNNTRKLVICKANNDPPLQIPALTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGVINSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGSSSDADWVQNANLAFNKLSSSPEEKSEVDTFNSSLASLISSVTQNDVESSKTAFVASATALEKWTALAGLVGQLKGL

Homology

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BLAST of Lag0006892 vs. NCBI nr
Match: XP_038889145.1 (thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 401.4 bits (1030), Expect = 5.5e-108
Identity = 221/237 (93.25%), Postives = 228/237 (96.20%), Query Frame = 0


Query: 1   MATSFLSTANTFYSSTP---SSSSSSSSSSSPPLLRSRFGCLHCHNNTRKLVICKANNDP 60
           MATSFLSTANTF+SSTP   SSSSSSSSSSSPPLLRSRFGCLHCHNNT++LVICK  NDP
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSSSSSSSPPLLRSRFGCLHCHNNTKRLVICKGINDP 60

Query: 61  PLQIPALTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQ 120
           P QIPALTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQ
Sbjct: 61  PSQIPALTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQ 120

Query: 121 GVINSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGSSSDADWVQNANLAFNKLSS 180
           GVI+SANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLG SSDADWV+NANLAFNKLSS
Sbjct: 121 GVISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSSDADWVRNANLAFNKLSS 180

Query: 181 SPEEKSEVDTFNSSLASLISSVTQNDVESSKTAFVASATALEKWTALAGLVGQLKGL 235
           SPEEKSEVD FNSSLASLISSVTQNDVESSKTAFVASA+ALEKWTA+ GLVGQLKGL
Sbjct: 181 SPEEKSEVDAFNSSLASLISSVTQNDVESSKTAFVASASALEKWTAMVGLVGQLKGL 237

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BLAST of Lag0006892 vs. NCBI nr
Match: KAG6599393.1 (Thylakoid lumenal 16.5 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 394.8 bits (1013), Expect = 5.1e-106
Identity = 218/236 (92.37%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 1   MATSFLSTANTFYSSTP--SSSSSSSSSSSPPLLRSRFGCLHCHNNTRKLVICKANNDPP 60
           MATSFLSTANTF+SSTP  SSSSSSSSSSSPPLLRSRF CL+C NN R+LVICK NNDPP
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSSSSSSPPLLRSRFSCLNCRNNARRLVICKGNNDPP 60

Query: 61  LQIPALTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG 120
            QIP LTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG
Sbjct: 61  SQIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG 120

Query: 121 VINSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGSSSDADWVQNANLAFNKLSSS 180
           VI+SANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLG S+DADWV+NANLAFNKLSSS
Sbjct: 121 VISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSS 180

Query: 181 PEEKSEVDTFNSSLASLISSVTQNDVESSKTAFVASATALEKWTALAGLVGQLKGL 235
           PEEKSEVD FNSSLASLISSVTQNDV+SSKTAFVASA+ALEKWTALAGLVGQLKGL
Sbjct: 181 PEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 236

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BLAST of Lag0006892 vs. NCBI nr
Match: XP_008457444.1 (PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic [Cucumis melo] >KAA0063500.1 thylakoid lumenal 16.5 kDa protein [Cucumis melo var. makuwa] >TYJ97826.1 thylakoid lumenal 16.5 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 392.9 bits (1008), Expect = 1.9e-105
Identity = 212/234 (90.60%), Postives = 229/234 (97.86%), Query Frame = 0


Query: 1   MATSFLSTANTFYSSTPSSSSSSSSSSSPPLLRSRFGCLHCHNNTRKLVICKANNDPPLQ 60
           MATSFLSTANTF+SSTPSSSSSSSS SSPPLLRSRFGCL+CHNNT++LVICK+++DPP +
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPSK 60

Query: 61  IPALTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGVI 120
           IPALTKR+LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLE+QGVI
Sbjct: 61  IPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVI 120

Query: 121 NSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGSSSDADWVQNANLAFNKLSSSPE 180
           +SANKEKGYLQE+VYKLSKVGQAID+NDF+TASSVLG SSDADWVQNANLAFNKLSSSPE
Sbjct: 121 SSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSPE 180

Query: 181 EKSEVDTFNSSLASLISSVTQNDVESSKTAFVASATALEKWTALAGLVGQLKGL 235
           EKSEVD FNSSLASLISSVT++DVESSKTAFVASA+A EKWTALAGLVGQLKGL
Sbjct: 181 EKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 234

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BLAST of Lag0006892 vs. NCBI nr
Match: KAG7030378.1 (Thylakoid lumenal 16.5 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 392.1 bits (1006), Expect = 3.3e-105
Identity = 217/235 (92.34%), Postives = 225/235 (95.74%), Query Frame = 0


Query: 1   MATSFLSTANTFYSSTP-SSSSSSSSSSSPPLLRSRFGCLHCHNNTRKLVICKANNDPPL 60
           MATSFLSTANTF+SSTP SSSSSSSSSSS PLLRSRF CL+C NN R+LVICK NNDPP 
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSSSSSSPLLRSRFSCLNCRNNARRLVICKGNNDPPS 60

Query: 61  QIPALTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV 120
           QIP LTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV
Sbjct: 61  QIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV 120

Query: 121 INSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGSSSDADWVQNANLAFNKLSSSP 180
           I+SANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLG S+DADWV+NANLAFNKLSSSP
Sbjct: 121 ISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSSP 180

Query: 181 EEKSEVDTFNSSLASLISSVTQNDVESSKTAFVASATALEKWTALAGLVGQLKGL 235
           EEKSEVD FNSSLASLISSVTQNDV+SSKTAFVASA+ALEKWTALAGLVGQLKGL
Sbjct: 181 EEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 235

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BLAST of Lag0006892 vs. NCBI nr
Match: XP_023545851.1 (thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545852.1 thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545854.1 thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.3 bits (1004), Expect = 5.7e-105
Identity = 215/234 (91.88%), Postives = 223/234 (95.30%), Query Frame = 0


Query: 1   MATSFLSTANTFYSSTPSSSSSSSSSSSPPLLRSRFGCLHCHNNTRKLVICKANNDPPLQ 60
           MATSFLSTANTF+SSTP  SSSSSSSSSPPLLRSRF CL+C NN R+LVICK NNDPP Q
Sbjct: 1   MATSFLSTANTFHSSTP--SSSSSSSSSPPLLRSRFSCLNCRNNARRLVICKGNNDPPSQ 60

Query: 61  IPALTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGVI 120
           IP LTKRSLSICFIS FIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGVI
Sbjct: 61  IPTLTKRSLSICFISGFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGVI 120

Query: 121 NSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGSSSDADWVQNANLAFNKLSSSPE 180
           +SANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLG S+DADWV+NANLAFNKLSSSPE
Sbjct: 121 SSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSSPE 180

Query: 181 EKSEVDTFNSSLASLISSVTQNDVESSKTAFVASATALEKWTALAGLVGQLKGL 235
           EKSEVD FNSSLASLISSVTQNDV+SSKTAFVASA+ALEKWTALAGLVGQLKGL
Sbjct: 181 EKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 232

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BLAST of Lag0006892 vs. ExPASy Swiss-Prot
Match: O22773 (Thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g02530 PE=1 SV=3)

HSP 1 Score: 197.2 bits (500), Expect = 2.1e-49
Identity = 133/239 (55.65%), Postives = 161/239 (67.36%), Query Frame = 0


Query: 1   MATSFL--STANTFYSSTPSSSSSSSSSSSPPLLRSRFGCLHCHNNTRKLVICKANNDPP 60
           MA S L  ST N F+S+T SSS  +  + S           +  N T   ++ K      
Sbjct: 1   MAKSLLCSSTLNPFFSTTLSSSKKNQIAYSG----------NSKNQTSSSLLWK------ 60

Query: 61  LQIPALTKRSLSICFISSFI-FPLVG--QGFSDANAAILEADDDEELLEKVKKDRKKRLE 120
                  +R LS+ F+SS +   LV   +   DANAAILEADDDEELLEKVK+DRKKR+E
Sbjct: 61  -------RRELSLGFMSSLVAIGLVSNDRRRHDANAAILEADDDEELLEKVKQDRKKRIE 120

Query: 121 RQGVINSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGSSSDADWVQNANLAFNKL 180
           RQ V+NSA KEKGYLQ++VYKLSKVGQAI+NND   A  VLG   D +WV+  NLAF KL
Sbjct: 121 RQAVLNSAVKEKGYLQDLVYKLSKVGQAIENNDLPAAGLVLGKGIDTEWVKTVNLAFTKL 180

Query: 181 SSSPEEKSEVDTFNSSLASLISSVTQNDVESSKTAFVASATALEKWTALAGLVGQLKGL 235
           S+SPEE +EV+ FNSSLASLI+SV +ND+ESSK AFV+SA A EKWT L GL+ QLKGL
Sbjct: 181 STSPEENTEVEAFNSSLASLITSVNKNDIESSKLAFVSSAGAFEKWTTLTGLLEQLKGL 216

[Close]

BLAST of Lag0006892 vs. ExPASy TrEMBL
Match: A0A5A7V8J2 (Thylakoid lumenal 16.5 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00360 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.4e-106
Identity = 212/234 (90.60%), Postives = 229/234 (97.86%), Query Frame = 0


Query: 1   MATSFLSTANTFYSSTPSSSSSSSSSSSPPLLRSRFGCLHCHNNTRKLVICKANNDPPLQ 60
           MATSFLSTANTF+SSTPSSSSSSSS SSPPLLRSRFGCL+CHNNT++LVICK+++DPP +
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPSK 60

Query: 61  IPALTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGVI 120
           IPALTKR+LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLE+QGVI
Sbjct: 61  IPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVI 120

Query: 121 NSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGSSSDADWVQNANLAFNKLSSSPE 180
           +SANKEKGYLQE+VYKLSKVGQAID+NDF+TASSVLG SSDADWVQNANLAFNKLSSSPE
Sbjct: 121 SSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSPE 180

Query: 181 EKSEVDTFNSSLASLISSVTQNDVESSKTAFVASATALEKWTALAGLVGQLKGL 235
           EKSEVD FNSSLASLISSVT++DVESSKTAFVASA+A EKWTALAGLVGQLKGL
Sbjct: 181 EKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 234

[Close]

BLAST of Lag0006892 vs. ExPASy TrEMBL
Match: A0A1S3C541 (thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497128 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.4e-106
Identity = 212/234 (90.60%), Postives = 229/234 (97.86%), Query Frame = 0


Query: 1   MATSFLSTANTFYSSTPSSSSSSSSSSSPPLLRSRFGCLHCHNNTRKLVICKANNDPPLQ 60
           MATSFLSTANTF+SSTPSSSSSSSS SSPPLLRSRFGCL+CHNNT++LVICK+++DPP +
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPSK 60

Query: 61  IPALTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGVI 120
           IPALTKR+LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLE+QGVI
Sbjct: 61  IPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVI 120

Query: 121 NSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGSSSDADWVQNANLAFNKLSSSPE 180
           +SANKEKGYLQE+VYKLSKVGQAID+NDF+TASSVLG SSDADWVQNANLAFNKLSSSPE
Sbjct: 121 SSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSPE 180

Query: 181 EKSEVDTFNSSLASLISSVTQNDVESSKTAFVASATALEKWTALAGLVGQLKGL 235
           EKSEVD FNSSLASLISSVT++DVESSKTAFVASA+A EKWTALAGLVGQLKGL
Sbjct: 181 EKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 234

[Close]

BLAST of Lag0006892 vs. ExPASy TrEMBL
Match: A0A6J1G2S1 (thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111450272 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.3e-104
Identity = 216/236 (91.53%), Postives = 224/236 (94.92%), Query Frame = 0


Query: 1   MATSFLSTANTFYSSTP--SSSSSSSSSSSPPLLRSRFGCLHCHNNTRKLVICKANNDPP 60
           MATSFLSTANTF+SSTP  SSSSSSSSSSSPPLLRSRF CL+  NN R+LVICK NNDPP
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSSSSSSPPLLRSRFSCLNYRNNARRLVICKGNNDPP 60

Query: 61  LQIPALTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG 120
            QIP LTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG
Sbjct: 61  SQIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG 120

Query: 121 VINSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGSSSDADWVQNANLAFNKLSSS 180
           VI+SANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLG S+DADWV+NANLAFNKLSSS
Sbjct: 121 VISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSS 180

Query: 181 PEEKSEVDTFNSSLASLISSVTQNDVESSKTAFVASATALEKWTALAGLVGQLKGL 235
           PEEKSEVD FNSSLASLISSVTQNDV+SSKTAFVA A+ALEKWTALAGLVGQLKGL
Sbjct: 181 PEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVALASALEKWTALAGLVGQLKGL 236

[Close]

BLAST of Lag0006892 vs. ExPASy TrEMBL
Match: A0A6J1KEL3 (thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493636 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 4.0e-104
Identity = 213/235 (90.64%), Postives = 226/235 (96.17%), Query Frame = 0


Query: 1   MATSFLSTANTFYSSTP-SSSSSSSSSSSPPLLRSRFGCLHCHNNTRKLVICKANNDPPL 60
           MATSFLSTANTF+SS+P SSSSSSSSSSSPPLLRSRF CL+C NN R+ VICK NNDPP 
Sbjct: 1   MATSFLSTANTFHSSSPSSSSSSSSSSSSPPLLRSRFSCLNCRNNARRSVICKGNNDPPS 60

Query: 61  QIPALTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV 120
           +IP+LTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV
Sbjct: 61  KIPSLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV 120

Query: 121 INSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGSSSDADWVQNANLAFNKLSSSP 180
           I+SANKEKGYLQEVV+KLSKVGQAIDNNDFSTASSVLG S+DADWV+NANLAFNKLS+SP
Sbjct: 121 ISSANKEKGYLQEVVFKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSTSP 180

Query: 181 EEKSEVDTFNSSLASLISSVTQNDVESSKTAFVASATALEKWTALAGLVGQLKGL 235
           EEKSEVD FNSSLASLISSVTQNDV+SSKTAFVASA+ALEKWTALAGLVGQLKGL
Sbjct: 181 EEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 235

[Close]

BLAST of Lag0006892 vs. ExPASy TrEMBL
Match: A0A0A0LI29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006840 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.4e-103
Identity = 210/238 (88.24%), Postives = 227/238 (95.38%), Query Frame = 0


Query: 1   MATSFLSTANTFYSSTPSSSSSSSSSSS----PPLLRSRFGCLHCHNNTRKLVICKANND 60
           MAT+FLSTANTF+SSTPSS SSSSSSSS    PPL+RSRFGCL+CHNNT++LVICK+++D
Sbjct: 1   MATAFLSTANTFHSSTPSSPSSSSSSSSSYFTPPLIRSRFGCLYCHNNTKRLVICKSSSD 60

Query: 61  PPLQIPALTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLER 120
           PP +IPALTKR+LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLE+
Sbjct: 61  PPSKIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEK 120

Query: 121 QGVINSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGSSSDADWVQNANLAFNKLS 180
           QGVI+SANKEKGYLQE+VYKLSKVGQAIDNNDFSTASSVLG SSDADWV+ AN AFNKLS
Sbjct: 121 QGVISSANKEKGYLQELVYKLSKVGQAIDNNDFSTASSVLGGSSDADWVKKANSAFNKLS 180

Query: 181 SSPEEKSEVDTFNSSLASLISSVTQNDVESSKTAFVASATALEKWTALAGLVGQLKGL 235
           SSPEEKSEVD FNSSLASLISSVT+NDVESSKTAFVASA+A EKWTALAGLVGQLKGL
Sbjct: 181 SSPEEKSEVDAFNSSLASLISSVTKNDVESSKTAFVASASAFEKWTALAGLVGQLKGL 238

[Close]

BLAST of Lag0006892 vs. TAIR 10
Match: AT4G02530.1 (chloroplast thylakoid lumen protein )

HSP 1 Score: 197.2 bits (500), Expect = 1.5e-50
Identity = 133/239 (55.65%), Postives = 161/239 (67.36%), Query Frame = 0


Query: 1   MATSFL--STANTFYSSTPSSSSSSSSSSSPPLLRSRFGCLHCHNNTRKLVICKANNDPP 60
           MA S L  ST N F+S+T SSS  +  + S           +  N T   ++ K      
Sbjct: 1   MAKSLLCSSTLNPFFSTTLSSSKKNQIAYSG----------NSKNQTSSSLLWK------ 60

Query: 61  LQIPALTKRSLSICFISSFI-FPLVG--QGFSDANAAILEADDDEELLEKVKKDRKKRLE 120
                  +R LS+ F+SS +   LV   +   DANAAILEADDDEELLEKVK+DRKKR+E
Sbjct: 61  -------RRELSLGFMSSLVAIGLVSNDRRRHDANAAILEADDDEELLEKVKQDRKKRIE 120

Query: 121 RQGVINSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGSSSDADWVQNANLAFNKL 180
           RQ V+NSA KEKGYLQ++VYKLSKVGQAI+NND   A  VLG   D +WV+  NLAF KL
Sbjct: 121 RQAVLNSAVKEKGYLQDLVYKLSKVGQAIENNDLPAAGLVLGKGIDTEWVKTVNLAFTKL 180

Query: 181 SSSPEEKSEVDTFNSSLASLISSVTQNDVESSKTAFVASATALEKWTALAGLVGQLKGL 235
           S+SPEE +EV+ FNSSLASLI+SV +ND+ESSK AFV+SA A EKWT L GL+ QLKGL
Sbjct: 181 STSPEENTEVEAFNSSLASLITSVNKNDIESSKLAFVSSAGAFEKWTTLTGLLEQLKGL 216

The following BLAST results are available for this feature:

BLAST of Lag0006892 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889145.1	5.5e-108	93.25	thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Benincasa hispida]	[more]
KAG6599393.1	5.1e-106	92.37	Thylakoid lumenal 16.5 kDa protein, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_008457444.1	1.9e-105	90.60	PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic [Cucumis melo] >KAA...	[more]
KAG7030378.1	3.3e-105	92.34	Thylakoid lumenal 16.5 kDa protein, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_023545851.1	5.7e-105	91.88	thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Cucurbita pepo sub...	[more]

BLAST of Lag0006892 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22773	2.1e-49	55.65	Thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Lag0006892 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V8J2	9.4e-106	90.60	Thylakoid lumenal 16.5 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C541	9.4e-106	90.60	thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1G2S1	2.3e-104	91.53	thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1KEL3	4.0e-104	90.64	thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN...	[more]
A0A0A0LI29	3.4e-103	88.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006840 PE=4 SV=1	[more]

BLAST of Lag0006892 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02530.1	1.5e-50	55.65	chloroplast thylakoid lumen protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038862	Chloroplast thylakoid lumenal protein MPH2	PANTHER	PTHR35742	THYLAKOID LUMENAL 16.5 KDA PROTEIN, CHLOROPLASTIC	coord: 1..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0006892.1	Lag0006892.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010206	photosystem II repair