Lag0006774 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0006774
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Locationchr6: 45713635 .. 45714555 (-)
RNA-Seq ExpressionLag0006774
SyntenyLag0006774
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGTGTTCCATGATTTTTTCAGAAAAGGTGTAGTGAACCGCAATGTTAATGGGACCTATATTTCTCTAATTCCAAAGAGGGCTAGCTGCACCAAAGTCTCGGACTACAGGCCCATCAGCCTTACTACTGCCTTATACAAACTGATTGCAAAAGTTCTAGCTGAGAGGTTAAAACCATCTCTCCCAAATACTGTTGCCGAAAACCAATTGGCCTTCGTCAAAGACAGGCAAATTACTGATGTTATCCTCTTGGCAAACGAAGCAGTGGATTACTGGAAATGCTCCAAAAAAAAAAGAGACATTATGATTAAGCTTGATTTAGAGAAGGCCTTTGATAAGATTAGCTGGGAATTTATAGATGTGGTGATGCAACAAAAAGGCTACTCTAAGAAATGGAGACAATGGATTAAAGCGTGCATATCTACAGTCAGCTACTCAGTGATTATTAACGGCAGACCGAAAGAGAAGATTATAGCTTCAAGAGGCATTCGTCAAGGAGACCCGCTCTCCCCTTTCATTTTTGTCCTTGCGATGGACTACTTGAGCAGACTGCTTAATGCTACAGAGGAAAAAGGCCTTATTGCTGGTGTCAGCTTAGGCCCGTCCAGTCCTTCTATTATGCACCTAATGTTCGCTGATGATATATTGCTTTTCGTGCAGGATGATAATTCCTATTTGAACAATCTTTTCAAAATTATAAAGGTCTTTGAGATTGCCTCGGGTCTAAACATAAATCTATCTAAGTCTGCCATCACAGGTATCAACATACCAGACCATCGTATTCAGGAAATTGCTGGTTCTTGGGGTTGCGCTCATCAAAGCCTTCCCATCTCCTATTTAGGTGCTCCCCTTGGTGGAAAACCCTCCTCCGAGTCTTTTTGGCATCCAATTTTGGAGAAGATTGAGAAAAAAACTTGA

mRNA sequence

ATGACTGTGTTCCATGATTTTTTCAGAAAAGGTGTAGTGAACCGCAATGTTAATGGGACCTATATTTCTCTAATTCCAAAGAGGGCTAGCTGCACCAAAGTCTCGGACTACAGGCCCATCAGCCTTACTACTGCCTTATACAAACTGATTGCAAAAGTTCTAGCTGAGAGGTTAAAACCATCTCTCCCAAATACTGTTGCCGAAAACCAATTGGCCTTCGTCAAAGACAGGCAAATTACTGATGTTATCCTCTTGGCAAACGAAGCAGTGGATTACTGGAAATGCTCCAAAAAAAAAAGAGACATTATGATTAAGCTTGATTTAGAGAAGGCCTTTGATAAGATTAGCTGGGAATTTATAGATGTGGTGATGCAACAAAAAGGCTACTCTAAGAAATGGAGACAATGGATTAAAGCGTGCATATCTACAGTCAGCTACTCAGTGATTATTAACGGCAGACCGAAAGAGAAGATTATAGCTTCAAGAGGCATTCGTCAAGGAGACCCGCTCTCCCCTTTCATTTTTGTCCTTGCGATGGACTACTTGAGCAGACTGCTTAATGCTACAGAGGAAAAAGGCCTTATTGCTGGTGTCAGCTTAGGCCCGTCCAGTCCTTCTATTATGCACCTAATGTTCGCTGATGATATATTGCTTTTCGTGCAGGATGATAATTCCTATTTGAACAATCTTTTCAAAATTATAAAGGTCTTTGAGATTGCCTCGGGTCTAAACATAAATCTATCTAAGTCTGCCATCACAGGTATCAACATACCAGACCATCGTATTCAGGAAATTGCTGGTTCTTGGGGTTGCGCTCATCAAAGCCTTCCCATCTCCTATTTAGGTGCTCCCCTTGGTGGAAAACCCTCCTCCGAGTCTTTTTGGCATCCAATTTTGGAGAAGATTGAGAAAAAAACTTGA

Coding sequence (CDS)

ATGACTGTGTTCCATGATTTTTTCAGAAAAGGTGTAGTGAACCGCAATGTTAATGGGACCTATATTTCTCTAATTCCAAAGAGGGCTAGCTGCACCAAAGTCTCGGACTACAGGCCCATCAGCCTTACTACTGCCTTATACAAACTGATTGCAAAAGTTCTAGCTGAGAGGTTAAAACCATCTCTCCCAAATACTGTTGCCGAAAACCAATTGGCCTTCGTCAAAGACAGGCAAATTACTGATGTTATCCTCTTGGCAAACGAAGCAGTGGATTACTGGAAATGCTCCAAAAAAAAAAGAGACATTATGATTAAGCTTGATTTAGAGAAGGCCTTTGATAAGATTAGCTGGGAATTTATAGATGTGGTGATGCAACAAAAAGGCTACTCTAAGAAATGGAGACAATGGATTAAAGCGTGCATATCTACAGTCAGCTACTCAGTGATTATTAACGGCAGACCGAAAGAGAAGATTATAGCTTCAAGAGGCATTCGTCAAGGAGACCCGCTCTCCCCTTTCATTTTTGTCCTTGCGATGGACTACTTGAGCAGACTGCTTAATGCTACAGAGGAAAAAGGCCTTATTGCTGGTGTCAGCTTAGGCCCGTCCAGTCCTTCTATTATGCACCTAATGTTCGCTGATGATATATTGCTTTTCGTGCAGGATGATAATTCCTATTTGAACAATCTTTTCAAAATTATAAAGGTCTTTGAGATTGCCTCGGGTCTAAACATAAATCTATCTAAGTCTGCCATCACAGGTATCAACATACCAGACCATCGTATTCAGGAAATTGCTGGTTCTTGGGGTTGCGCTCATCAAAGCCTTCCCATCTCCTATTTAGGTGCTCCCCTTGGTGGAAAACCCTCCTCCGAGTCTTTTTGGCATCCAATTTTGGAGAAGATTGAGAAAAAAACTTGA

Protein sequence

MTVFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKPSLPNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFIDVVMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMDYLSRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIASGLNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILEKIEKKT
Homology
BLAST of Lag0006774 vs. NCBI nr
Match: KAA0046762.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 373.2 bits (957), Expect = 2.1e-99
Identity = 178/305 (58.36%), Postives = 239/305 (78.36%), Query Frame = 0

Query: 1   MTVFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKP 60
           M +F DF+ KGV+N+N+N TYI+LIPK+   +   D+RPISLTT++YK+IAK L+ RLK 
Sbjct: 318 MDIFKDFYDKGVINKNMNNTYIALIPKKKDFSNPKDFRPISLTTSIYKIIAKTLSNRLKT 377

Query: 61  SLPNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFI 120
           SLPNT++ENQLAFVK+RQITD IL+ANEAVD+WK  KK +  ++KLD+EKAFD ++W+FI
Sbjct: 378 SLPNTISENQLAFVKNRQITDAILMANEAVDFWKV-KKIKGFILKLDIEKAFDNLNWDFI 437

Query: 121 DVVMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMD 180
           D V+++K +   WR+WI+ CIS V+YS+I+NGRP+ +I A+RG+RQGDPLSPF+FV+AMD
Sbjct: 438 DFVLEKKNFPILWRKWIRGCISNVTYSIIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMD 497

Query: 181 YLSRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIA 240
           YLSRLL+  E  G I GVS   S+ +I H++FADDILLF++D++ +LNNL   + +FE A
Sbjct: 498 YLSRLLSHLEITGAIKGVSFS-SNCNISHILFADDILLFIEDNDFFLNNLRMALSLFERA 557

Query: 241 SGLNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILE 300
           SGL INL KSA+  +N+ + R +E A  WG + QSLP+SYLG PLGG P S  FW  + E
Sbjct: 558 SGLKINLLKSALVPMNVSEIRAKECASFWGISSQSLPLSYLGVPLGGNPKSRLFWSNVEE 617

Query: 301 KIEKK 306
           KI+KK
Sbjct: 618 KIQKK 620

BLAST of Lag0006774 vs. NCBI nr
Match: TYJ99326.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 373.2 bits (957), Expect = 2.1e-99
Identity = 182/303 (60.07%), Postives = 239/303 (78.88%), Query Frame = 0

Query: 3   VFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKPSL 62
           +F DF     +N+ VN T I+ I K+ +C  V+D+RPISLTTA+YKLIAKVLA+RLK +L
Sbjct: 406 IFKDFHSNHTINKVVNETLITFIAKKENCETVADFRPISLTTAIYKLIAKVLADRLKQTL 465

Query: 63  PNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFIDV 122
           P+T++E+Q+AFVK RQIT+ IL+ANEA+D W+ +KK+R  +IKLD+EKAFDK++W FID 
Sbjct: 466 PDTISESQMAFVKGRQITEAILIANEALDLWR-NKKERGFVIKLDIEKAFDKLNWRFIDF 525

Query: 123 VMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMDYL 182
           ++ +K YS+KWR+ I +CIS+V YS++INGRP+ +I  SRGIRQGDPLSPFIFVLAMDYL
Sbjct: 526 MLMKKNYSQKWRKMIASCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYL 585

Query: 183 SRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIASG 242
           SRLLN   +KG I GV+ GP+  ++ H++FADDIL+FV+D + Y++NL  I+ +FE ASG
Sbjct: 586 SRLLNNLADKGKINGVNFGPNL-NLTHILFADDILIFVEDKDDYVSNLKMILHLFESASG 645

Query: 243 LNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILEKI 302
           LNINLSKS I  IN+P  R   IA SWG +   LP SYLG PLGGKPSS +FW  +L+KI
Sbjct: 646 LNINLSKSTIFPINVPADRANSIADSWGISKGHLPTSYLGMPLGGKPSSSNFWDNVLQKI 705

Query: 303 EKK 306
           +KK
Sbjct: 706 QKK 706

BLAST of Lag0006774 vs. NCBI nr
Match: KAA0039950.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK24553.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 369.0 bits (946), Expect = 3.9e-98
Identity = 180/303 (59.41%), Postives = 237/303 (78.22%), Query Frame = 0

Query: 3   VFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKPSL 62
           +F DF    ++N+ VN T I+LI K+  C   +D+RPISLTTA+YKLIAK LA+RLK +L
Sbjct: 406 IFKDFHSTHIINKVVNETLITLIAKKEHCETAADFRPISLTTAIYKLIAKTLADRLKQTL 465

Query: 63  PNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFIDV 122
           P+T++E+Q+AFVK RQIT+ IL+ANEA+D+W+ SKK+R  +IKLD+EKAFDK++W FID 
Sbjct: 466 PDTISESQMAFVKGRQITEAILIANEALDFWR-SKKERGFVIKLDIEKAFDKLNWRFIDF 525

Query: 123 VMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMDYL 182
           V+ +K YS+KWR+ I +CIS+V YS++INGRP+ +I  SRGIRQGDPLSPFIFVLAMDYL
Sbjct: 526 VLMKKNYSQKWRKMIASCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYL 585

Query: 183 SRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIASG 242
           SRLLN   +K  I GV   P+  ++ H++FADDIL+FV+D + Y++NL  I+ +FE ASG
Sbjct: 586 SRLLNNLADKRKINGVKFSPNL-NLTHILFADDILIFVEDRDDYVSNLKMILHLFESASG 645

Query: 243 LNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILEKI 302
           LNINLSKS I  IN+P  R + IA SWG +   LP SYLG PLGG+PSS +FW  +L+KI
Sbjct: 646 LNINLSKSTIFPINVPTDRAKSIADSWGISKGHLPTSYLGMPLGGRPSSSNFWDNVLQKI 705

Query: 303 EKK 306
           +KK
Sbjct: 706 QKK 706

BLAST of Lag0006774 vs. NCBI nr
Match: KAA0041397.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 365.9 bits (938), Expect = 3.3e-97
Identity = 181/303 (59.74%), Postives = 233/303 (76.90%), Query Frame = 0

Query: 3   VFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKPSL 62
           +F DF     +N+ VN T I+LI K+ +C  VSD+RPISLTTA+YKLIAKVLA+RLK +L
Sbjct: 298 IFKDFHSNHTINKVVNETLITLIAKKDNCETVSDFRPISLTTAIYKLIAKVLADRLKQTL 357

Query: 63  PNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFIDV 122
           P T++E Q+AFVK RQIT+ IL+ANEA+D+W+ +KK+R  +IKLD+EKAFDK++W FID 
Sbjct: 358 PYTISELQMAFVKGRQITEAILIANEALDFWR-NKKERGFVIKLDIEKAFDKLNWRFIDF 417

Query: 123 VMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMDYL 182
           ++ +K YS KWR  I +CIS+V YS++INGRP+ +I  +RGIRQGDPLSPFIFVLAMDYL
Sbjct: 418 MLMKKNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGIRQGDPLSPFIFVLAMDYL 477

Query: 183 SRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIASG 242
           S LL    EKG I GV+ GP+  ++ H++FADDIL+FV+D   Y++NL  I+ +FE ASG
Sbjct: 478 SHLLINLAEKGKINGVNFGPNL-NLTHILFADDILIFVEDKEDYVSNLKMILHLFESASG 537

Query: 243 LNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILEKI 302
           LNINLSKS I  IN+P  R   I  SWG +   LP +YLG PLGGKPSS +FW  IL+KI
Sbjct: 538 LNINLSKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNILQKI 597

Query: 303 EKK 306
           +KK
Sbjct: 598 QKK 598

BLAST of Lag0006774 vs. NCBI nr
Match: KAA0037445.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK01919.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 365.5 bits (937), Expect = 4.4e-97
Identity = 173/305 (56.72%), Postives = 238/305 (78.03%), Query Frame = 0

Query: 1   MTVFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKP 60
           M +F DF+ KGV+N+N+N TYI+LIPK+ + +   D+RPISLTT++YK+IAK L+ RLK 
Sbjct: 318 MDIFKDFYDKGVINKNMNNTYIALIPKKKNYSHPKDFRPISLTTSIYKIIAKTLSNRLKT 377

Query: 61  SLPNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFI 120
           +LP+T++ NQLAFVK+RQITD IL+ANEA+D+WK  KK +  ++KLD+EKAFD ++W+FI
Sbjct: 378 ALPDTISGNQLAFVKNRQITDAILMANEALDFWKV-KKIKGFILKLDIEKAFDNLNWDFI 437

Query: 121 DVVMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMD 180
           D V+++K +   WR+WI+ CIS V+YSVI+NGRP+ +I A+RG+RQGDPLSPF+FV+AMD
Sbjct: 438 DFVLEKKNFPNLWRKWIRGCISNVTYSVIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMD 497

Query: 181 YLSRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIA 240
           YLSRLL+  E  G I GVSL  S+ +I H++FADDILLF++D++ +L NL   + +FE A
Sbjct: 498 YLSRLLSHLESSGAIKGVSLN-SNCNISHILFADDILLFIEDNDYFLKNLRMALSLFEKA 557

Query: 241 SGLNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILE 300
           SGL INL KSA+  +N+  +R +E A  WG +  SLP+SYLG PLGG P S  FW  + +
Sbjct: 558 SGLKINLLKSALVPVNVSVNRAKECASFWGISCHSLPLSYLGVPLGGNPKSNLFWRNVED 617

Query: 301 KIEKK 306
           KI+KK
Sbjct: 618 KIQKK 620

BLAST of Lag0006774 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 9.9e-28
Identity = 87/309 (28.16%), Postives = 151/309 (48.87%), Query Frame = 0

Query: 1   MTVFHDFFRKGVVNRNVNGTYISLIPKRA-SCTKVSDYRPISLTTALYKLIAKVLAERLK 60
           + +F    ++G++  +     I LIPK     TK  ++RPISL     K++ K+LA R++
Sbjct: 493 LKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQ 552

Query: 61  PSLPNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEF 120
             +   +  +Q+ F+   Q    I  +   + +   +K K  ++I +D EKAFDKI   F
Sbjct: 553 QHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRAKDKNHVIISIDAEKAFDKIQQPF 612

Query: 121 IDVVMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAM 180
           +   + + G    + + I+A     + ++I+NG+  E      G RQG PLSP +F + +
Sbjct: 613 MLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVL 672

Query: 181 DYLSRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEI 240
           + L+R +   +E   I G+ LG     +   +FADD+++++++      NL K+I  F  
Sbjct: 673 EVLARAIRQEKE---IKGIQLGKEEVKLS--LFADDMIVYLENPIVSAQNLLKLISNFSK 732

Query: 241 ASGLNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPL--GGKPSSESFWHP 300
            SG  IN+ KS     N       +I G       S  I YLG  L    K   +  + P
Sbjct: 733 VSGYKINVQKSQAFLYNNNRQTESQIMGELPFTIASKRIKYLGIQLTRDVKDLFKENYKP 792

Query: 301 ILEKIEKKT 307
           +L++I++ T
Sbjct: 793 LLKEIKEDT 796

BLAST of Lag0006774 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-25
Identity = 76/249 (30.52%), Postives = 126/249 (50.60%), Query Frame = 0

Query: 3   VFHDFFRKGVVNRNVNGTYISLIPK-RASCTKVSDYRPISLTTALYKLIAKVLAERLKPS 62
           +FH    +G +  +     I+LIPK +   TK+ ++RPISL     K++ K+LA R++  
Sbjct: 502 LFHKIEVEGTLPNSFYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEH 561

Query: 63  LPNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFID 122
           +   +  +Q+ F+   Q    I  +   + Y    K K  ++I LD EKAFDKI   F+ 
Sbjct: 562 IKAIIHPDQVGFIPGMQGWFNIRKSINVIHYINKLKDKNHMIISLDAEKAFDKIQHPFMI 621

Query: 123 VVMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMDY 182
            V+++ G    +   IKA  S    ++ +NG   E I    G RQG PLSP++F + ++ 
Sbjct: 622 KVLERSGIQGPYLNMIKAIYSKPVANIKVNGEKLEAIPLKSGTRQGCPLSPYLFNIVLEV 681

Query: 183 LSRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIAS 242
           L+R +   +E   I G+ +G     I   + ADD+++++ D  +    L  +I  F    
Sbjct: 682 LARAIRQQKE---IKGIQIGKEEVKIS--LLADDMIVYISDPKNSTRELLNLINSFGEVV 741

Query: 243 GLNINLSKS 251
           G  IN +KS
Sbjct: 742 GYKINSNKS 745

BLAST of Lag0006774 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.7e-22
Identity = 70/251 (27.89%), Postives = 127/251 (50.60%), Query Frame = 0

Query: 1   MTVFHDFFRKGVVNRNVNGTYISLIPKRA-SCTKVSDYRPISLTTALYKLIAKVLAERLK 60
           + +F +  ++G++        I+LIPK     T+  +YRPISL     K++ K+L  R++
Sbjct: 492 LNLFQNIEKEGILPNTFYEANITLIPKPGKDPTRKENYRPISLMNIDAKILNKILTNRIQ 551

Query: 61  PSLPNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEF 120
             +   +  +Q+ F+   Q    I  +   + +    K K  +++ +D EKAFD I   F
Sbjct: 552 QHIKKIIHHDQVGFIPGSQGWFNIRKSINVIQHINKLKNKDHMILSIDAEKAFDNIQHPF 611

Query: 121 IDVVMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAM 180
           +   +++ G    + + I+A  S  + ++I+NG   +      G RQG PLSP +F + M
Sbjct: 612 MIRTLKKIGIEGTFLKLIEAIYSKPTANIILNGVKLKSFPLRSGTRQGCPLSPLLFNIVM 671

Query: 181 DYLSRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEI 240
           + L+    A  E+  I G+ +G  S  I   +FADD+++++++       L ++IK +  
Sbjct: 672 EVLA---IAIREEKAIKGIHIG--SEEIKLSLFADDMIVYLENTRDSTTKLLEVIKEYSN 731

Query: 241 ASGLNINLSKS 251
            SG  IN  KS
Sbjct: 732 VSGYKINTHKS 737

BLAST of Lag0006774 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-18
Identity = 77/295 (26.10%), Postives = 144/295 (48.81%), Query Frame = 0

Query: 3   VFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKPSL 62
           V  + F+KG +  +     +SL+PK+     + ++RP+SL +  YK++AK ++ RLK  L
Sbjct: 491 VLTEAFKKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVL 550

Query: 63  PNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFIDV 122
              +  +Q   V  R I D + L  + + + + +       + LD EKAFD++  +++  
Sbjct: 551 AEVIHPDQSYTVPGRTIFDNVFLIRDLLHFARRTGLSL-AFLSLDQEKAFDRVDHQYLIG 610

Query: 123 VMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMDYL 182
            +Q   +  ++  ++K   ++    V IN      +   RG+RQG PLS  ++ LA++  
Sbjct: 611 TLQAYSFGPQFVGYLKTMYASAECLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIEPF 670

Query: 183 SRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIASG 242
             LL     +  + G+ L      ++   +ADD++L  QD    L    +  +V+  AS 
Sbjct: 671 LCLL-----RKRLTGLVLKEPDMRVVLSAYADDVILVAQDLVD-LERAQECQEVYAAASS 730

Query: 243 LNINLSKSAITGINIPDHRIQEIAGSW-GCAHQSLPISYLGAPLGGK--PSSESF 295
             IN SKS  +G+     ++  +  ++   + +S  I YLG  L  +  P S++F
Sbjct: 731 ARINWSKS--SGLLEGSLKVDFLPPAFRDISWESKIIKYLGVYLSAEEYPVSQNF 776

BLAST of Lag0006774 vs. ExPASy Swiss-Prot
Match: Q03274 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.7e-17
Identity = 66/229 (28.82%), Postives = 114/229 (49.78%), Query Frame = 0

Query: 23  SLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKPSLPNTVAENQLAFVKDRQITDV 82
           +LIPK       S++RPI++ +AL +L+ ++LA+RL+ ++    A+   A +    +  +
Sbjct: 62  TLIPKDGDLENPSNWRPITIASALQRLLHRILAKRLEAAVELHPAQKGYARIDGTLVNSL 121

Query: 83  ILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFIDVVMQQKGYSKKWRQWIKACIS 142
           +L   +     +  ++K   ++ LD+ KAFD +S   I   +Q+ G  +    +I   +S
Sbjct: 122 LL---DTYISSRREQRKTYNVVSLDVRKAFDTVSHSSICRALQRLGIDEGTSNYITGSLS 181

Query: 143 TVSYSVIIN-GRPKEKIIASRGIRQGDPLSPFIFVLAMDYLSRLLNATEEKGLIAGVSLG 202
             + ++ +  G    KI   RG++QGDPLSPF+F   +D L   L +T   G   G    
Sbjct: 182 DSTTTIRVGPGSQTRKICIRRGVKQGDPLSPFLFNAVLDELLCSLQSTPGIGGTIG---- 241

Query: 203 PSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIASGLNINLSKS 251
                I  L FADD+LL   +D      L  +   F +  G+++N  KS
Sbjct: 242 --EEKIPVLAFADDLLLLEDNDVLLPTTLATVANFFRL-RGMSLNAKKS 280

BLAST of Lag0006774 vs. ExPASy TrEMBL
Match: A0A5D3BJP3 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005410 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 1.0e-99
Identity = 182/303 (60.07%), Postives = 239/303 (78.88%), Query Frame = 0

Query: 3   VFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKPSL 62
           +F DF     +N+ VN T I+ I K+ +C  V+D+RPISLTTA+YKLIAKVLA+RLK +L
Sbjct: 406 IFKDFHSNHTINKVVNETLITFIAKKENCETVADFRPISLTTAIYKLIAKVLADRLKQTL 465

Query: 63  PNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFIDV 122
           P+T++E+Q+AFVK RQIT+ IL+ANEA+D W+ +KK+R  +IKLD+EKAFDK++W FID 
Sbjct: 466 PDTISESQMAFVKGRQITEAILIANEALDLWR-NKKERGFVIKLDIEKAFDKLNWRFIDF 525

Query: 123 VMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMDYL 182
           ++ +K YS+KWR+ I +CIS+V YS++INGRP+ +I  SRGIRQGDPLSPFIFVLAMDYL
Sbjct: 526 MLMKKNYSQKWRKMIASCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYL 585

Query: 183 SRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIASG 242
           SRLLN   +KG I GV+ GP+  ++ H++FADDIL+FV+D + Y++NL  I+ +FE ASG
Sbjct: 586 SRLLNNLADKGKINGVNFGPNL-NLTHILFADDILIFVEDKDDYVSNLKMILHLFESASG 645

Query: 243 LNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILEKI 302
           LNINLSKS I  IN+P  R   IA SWG +   LP SYLG PLGGKPSS +FW  +L+KI
Sbjct: 646 LNINLSKSTIFPINVPADRANSIADSWGISKGHLPTSYLGMPLGGKPSSSNFWDNVLQKI 705

Query: 303 EKK 306
           +KK
Sbjct: 706 QKK 706

BLAST of Lag0006774 vs. ExPASy TrEMBL
Match: A0A5A7TTK1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00450 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 1.0e-99
Identity = 178/305 (58.36%), Postives = 239/305 (78.36%), Query Frame = 0

Query: 1   MTVFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKP 60
           M +F DF+ KGV+N+N+N TYI+LIPK+   +   D+RPISLTT++YK+IAK L+ RLK 
Sbjct: 318 MDIFKDFYDKGVINKNMNNTYIALIPKKKDFSNPKDFRPISLTTSIYKIIAKTLSNRLKT 377

Query: 61  SLPNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFI 120
           SLPNT++ENQLAFVK+RQITD IL+ANEAVD+WK  KK +  ++KLD+EKAFD ++W+FI
Sbjct: 378 SLPNTISENQLAFVKNRQITDAILMANEAVDFWKV-KKIKGFILKLDIEKAFDNLNWDFI 437

Query: 121 DVVMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMD 180
           D V+++K +   WR+WI+ CIS V+YS+I+NGRP+ +I A+RG+RQGDPLSPF+FV+AMD
Sbjct: 438 DFVLEKKNFPILWRKWIRGCISNVTYSIIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMD 497

Query: 181 YLSRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIA 240
           YLSRLL+  E  G I GVS   S+ +I H++FADDILLF++D++ +LNNL   + +FE A
Sbjct: 498 YLSRLLSHLEITGAIKGVSFS-SNCNISHILFADDILLFIEDNDFFLNNLRMALSLFERA 557

Query: 241 SGLNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILE 300
           SGL INL KSA+  +N+ + R +E A  WG + QSLP+SYLG PLGG P S  FW  + E
Sbjct: 558 SGLKINLLKSALVPMNVSEIRAKECASFWGISSQSLPLSYLGVPLGGNPKSRLFWSNVEE 617

Query: 301 KIEKK 306
           KI+KK
Sbjct: 618 KIQKK 620

BLAST of Lag0006774 vs. ExPASy TrEMBL
Match: A0A5A7T9I7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00980 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.9e-98
Identity = 180/303 (59.41%), Postives = 237/303 (78.22%), Query Frame = 0

Query: 3   VFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKPSL 62
           +F DF    ++N+ VN T I+LI K+  C   +D+RPISLTTA+YKLIAK LA+RLK +L
Sbjct: 406 IFKDFHSTHIINKVVNETLITLIAKKEHCETAADFRPISLTTAIYKLIAKTLADRLKQTL 465

Query: 63  PNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFIDV 122
           P+T++E+Q+AFVK RQIT+ IL+ANEA+D+W+ SKK+R  +IKLD+EKAFDK++W FID 
Sbjct: 466 PDTISESQMAFVKGRQITEAILIANEALDFWR-SKKERGFVIKLDIEKAFDKLNWRFIDF 525

Query: 123 VMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMDYL 182
           V+ +K YS+KWR+ I +CIS+V YS++INGRP+ +I  SRGIRQGDPLSPFIFVLAMDYL
Sbjct: 526 VLMKKNYSQKWRKMIASCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYL 585

Query: 183 SRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIASG 242
           SRLLN   +K  I GV   P+  ++ H++FADDIL+FV+D + Y++NL  I+ +FE ASG
Sbjct: 586 SRLLNNLADKRKINGVKFSPNL-NLTHILFADDILIFVEDRDDYVSNLKMILHLFESASG 645

Query: 243 LNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILEKI 302
           LNINLSKS I  IN+P  R + IA SWG +   LP SYLG PLGG+PSS +FW  +L+KI
Sbjct: 646 LNINLSKSTIFPINVPTDRAKSIADSWGISKGHLPTSYLGMPLGGRPSSSNFWDNVLQKI 705

Query: 303 EKK 306
           +KK
Sbjct: 706 QKK 706

BLAST of Lag0006774 vs. ExPASy TrEMBL
Match: A0A5A7TIB8 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00430 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.6e-97
Identity = 181/303 (59.74%), Postives = 233/303 (76.90%), Query Frame = 0

Query: 3   VFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKPSL 62
           +F DF     +N+ VN T I+LI K+ +C  VSD+RPISLTTA+YKLIAKVLA+RLK +L
Sbjct: 298 IFKDFHSNHTINKVVNETLITLIAKKDNCETVSDFRPISLTTAIYKLIAKVLADRLKQTL 357

Query: 63  PNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFIDV 122
           P T++E Q+AFVK RQIT+ IL+ANEA+D+W+ +KK+R  +IKLD+EKAFDK++W FID 
Sbjct: 358 PYTISELQMAFVKGRQITEAILIANEALDFWR-NKKERGFVIKLDIEKAFDKLNWRFIDF 417

Query: 123 VMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMDYL 182
           ++ +K YS KWR  I +CIS+V YS++INGRP+ +I  +RGIRQGDPLSPFIFVLAMDYL
Sbjct: 418 MLMKKNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGIRQGDPLSPFIFVLAMDYL 477

Query: 183 SRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIASG 242
           S LL    EKG I GV+ GP+  ++ H++FADDIL+FV+D   Y++NL  I+ +FE ASG
Sbjct: 478 SHLLINLAEKGKINGVNFGPNL-NLTHILFADDILIFVEDKEDYVSNLKMILHLFESASG 537

Query: 243 LNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILEKI 302
           LNINLSKS I  IN+P  R   I  SWG +   LP +YLG PLGGKPSS +FW  IL+KI
Sbjct: 538 LNINLSKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNILQKI 597

Query: 303 EKK 306
           +KK
Sbjct: 598 QKK 598

BLAST of Lag0006774 vs. ExPASy TrEMBL
Match: A0A5D3BUZ3 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00050 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 2.1e-97
Identity = 173/305 (56.72%), Postives = 238/305 (78.03%), Query Frame = 0

Query: 1   MTVFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKP 60
           M +F DF+ KGV+N+N+N TYI+LIPK+ + +   D+RPISLTT++YK+IAK L+ RLK 
Sbjct: 318 MDIFKDFYDKGVINKNMNNTYIALIPKKKNYSHPKDFRPISLTTSIYKIIAKTLSNRLKT 377

Query: 61  SLPNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFI 120
           +LP+T++ NQLAFVK+RQITD IL+ANEA+D+WK  KK +  ++KLD+EKAFD ++W+FI
Sbjct: 378 ALPDTISGNQLAFVKNRQITDAILMANEALDFWKV-KKIKGFILKLDIEKAFDNLNWDFI 437

Query: 121 DVVMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMD 180
           D V+++K +   WR+WI+ CIS V+YSVI+NGRP+ +I A+RG+RQGDPLSPF+FV+AMD
Sbjct: 438 DFVLEKKNFPNLWRKWIRGCISNVTYSVIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMD 497

Query: 181 YLSRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIA 240
           YLSRLL+  E  G I GVSL  S+ +I H++FADDILLF++D++ +L NL   + +FE A
Sbjct: 498 YLSRLLSHLESSGAIKGVSLN-SNCNISHILFADDILLFIEDNDYFLKNLRMALSLFEKA 557

Query: 241 SGLNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILE 300
           SGL INL KSA+  +N+  +R +E A  WG +  SLP+SYLG PLGG P S  FW  + +
Sbjct: 558 SGLKINLLKSALVPVNVSVNRAKECASFWGISCHSLPLSYLGVPLGGNPKSNLFWRNVED 617

Query: 301 KIEKK 306
           KI+KK
Sbjct: 618 KIQKK 620

BLAST of Lag0006774 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )

HSP 1 Score: 76.6 bits (187), Expect = 3.8e-14
Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 0

Query: 149 IINGRPKEKIIASRGIRQGDPLSPFIFVLAMDYLSRLLNATEEKGLIAGVSLGPSSPSIM 208
           IING P+  +  SRG+RQGDPLSP++F+L  + LS L    +E+G + G+ +  +SP I 
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72

Query: 209 HLMFADD 216
           HL+FADD
Sbjct: 73  HLLFADD 79

BLAST of Lag0006774 vs. TAIR 10
Match: AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-08
Identity = 29/81 (35.80%), Postives = 48/81 (59.26%), Query Frame = 0

Query: 54  LAERLKPSLPNTVAENQLAFVKDRQITDVILLANEAVDYWKCSK-KKRDIMIKLDLEKAF 113
           + ERLKP + N +   Q +F+  R  TD I+   EAV   +  K  K  +++KLDLEKA+
Sbjct: 1   MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60

Query: 114 DKISWEFIDVVMQQKGYSKKW 134
           D+I W++++  +   G+ + W
Sbjct: 61  DRIRWDYLEDTLISAGFPEVW 81

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0046762.12.1e-9958.36LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa][more]
TYJ99326.12.1e-9960.07LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa][more]
KAA0039950.13.9e-9859.41LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK245... [more]
KAA0041397.13.3e-9759.74LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa][more]
KAA0037445.14.4e-9756.72LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK019... [more]
Match NameE-valueIdentityDescription
O003709.9e-2828.16LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1[more]
P113691.2e-2530.52LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... [more]
P085483.7e-2227.89LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1[more]
P143811.1e-1826.10Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... [more]
Q032742.7e-1728.82Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fra... [more]
Match NameE-valueIdentityDescription
A0A5D3BJP31.0e-9960.07LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A5A7TTK11.0e-9958.36LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A5A7T9I71.9e-9859.41LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A5A7TIB81.6e-9759.74LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3BUZ32.1e-9756.72LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
Match NameE-valueIdentityDescription
ATMG01250.13.8e-1449.25RNA-directed DNA polymerase (reverse transcriptase) [more]
AT4G20520.11.4e-0835.80RNA binding;RNA-directed DNA polymerases [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 25..284
e-value: 1.2E-48
score: 165.5
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 6..285
score: 18.489649
NoneNo IPR availablePANTHERPTHR33116:SF33OS01G0885550 PROTEINcoord: 17..305
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 17..305
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 20..285
e-value: 7.94331E-58
score: 183.646
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 23..255

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0006774.1Lag0006774.1mRNA