Homology
BLAST of Lag0006774 vs. NCBI nr
Match:
KAA0046762.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 373.2 bits (957), Expect = 2.1e-99
Identity = 178/305 (58.36%), Postives = 239/305 (78.36%), Query Frame = 0
Query: 1 MTVFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKP 60
M +F DF+ KGV+N+N+N TYI+LIPK+ + D+RPISLTT++YK+IAK L+ RLK
Sbjct: 318 MDIFKDFYDKGVINKNMNNTYIALIPKKKDFSNPKDFRPISLTTSIYKIIAKTLSNRLKT 377
Query: 61 SLPNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFI 120
SLPNT++ENQLAFVK+RQITD IL+ANEAVD+WK KK + ++KLD+EKAFD ++W+FI
Sbjct: 378 SLPNTISENQLAFVKNRQITDAILMANEAVDFWKV-KKIKGFILKLDIEKAFDNLNWDFI 437
Query: 121 DVVMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMD 180
D V+++K + WR+WI+ CIS V+YS+I+NGRP+ +I A+RG+RQGDPLSPF+FV+AMD
Sbjct: 438 DFVLEKKNFPILWRKWIRGCISNVTYSIIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMD 497
Query: 181 YLSRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIA 240
YLSRLL+ E G I GVS S+ +I H++FADDILLF++D++ +LNNL + +FE A
Sbjct: 498 YLSRLLSHLEITGAIKGVSFS-SNCNISHILFADDILLFIEDNDFFLNNLRMALSLFERA 557
Query: 241 SGLNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILE 300
SGL INL KSA+ +N+ + R +E A WG + QSLP+SYLG PLGG P S FW + E
Sbjct: 558 SGLKINLLKSALVPMNVSEIRAKECASFWGISSQSLPLSYLGVPLGGNPKSRLFWSNVEE 617
Query: 301 KIEKK 306
KI+KK
Sbjct: 618 KIQKK 620
BLAST of Lag0006774 vs. NCBI nr
Match:
TYJ99326.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 373.2 bits (957), Expect = 2.1e-99
Identity = 182/303 (60.07%), Postives = 239/303 (78.88%), Query Frame = 0
Query: 3 VFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKPSL 62
+F DF +N+ VN T I+ I K+ +C V+D+RPISLTTA+YKLIAKVLA+RLK +L
Sbjct: 406 IFKDFHSNHTINKVVNETLITFIAKKENCETVADFRPISLTTAIYKLIAKVLADRLKQTL 465
Query: 63 PNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFIDV 122
P+T++E+Q+AFVK RQIT+ IL+ANEA+D W+ +KK+R +IKLD+EKAFDK++W FID
Sbjct: 466 PDTISESQMAFVKGRQITEAILIANEALDLWR-NKKERGFVIKLDIEKAFDKLNWRFIDF 525
Query: 123 VMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMDYL 182
++ +K YS+KWR+ I +CIS+V YS++INGRP+ +I SRGIRQGDPLSPFIFVLAMDYL
Sbjct: 526 MLMKKNYSQKWRKMIASCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYL 585
Query: 183 SRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIASG 242
SRLLN +KG I GV+ GP+ ++ H++FADDIL+FV+D + Y++NL I+ +FE ASG
Sbjct: 586 SRLLNNLADKGKINGVNFGPNL-NLTHILFADDILIFVEDKDDYVSNLKMILHLFESASG 645
Query: 243 LNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILEKI 302
LNINLSKS I IN+P R IA SWG + LP SYLG PLGGKPSS +FW +L+KI
Sbjct: 646 LNINLSKSTIFPINVPADRANSIADSWGISKGHLPTSYLGMPLGGKPSSSNFWDNVLQKI 705
Query: 303 EKK 306
+KK
Sbjct: 706 QKK 706
BLAST of Lag0006774 vs. NCBI nr
Match:
KAA0039950.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK24553.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 369.0 bits (946), Expect = 3.9e-98
Identity = 180/303 (59.41%), Postives = 237/303 (78.22%), Query Frame = 0
Query: 3 VFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKPSL 62
+F DF ++N+ VN T I+LI K+ C +D+RPISLTTA+YKLIAK LA+RLK +L
Sbjct: 406 IFKDFHSTHIINKVVNETLITLIAKKEHCETAADFRPISLTTAIYKLIAKTLADRLKQTL 465
Query: 63 PNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFIDV 122
P+T++E+Q+AFVK RQIT+ IL+ANEA+D+W+ SKK+R +IKLD+EKAFDK++W FID
Sbjct: 466 PDTISESQMAFVKGRQITEAILIANEALDFWR-SKKERGFVIKLDIEKAFDKLNWRFIDF 525
Query: 123 VMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMDYL 182
V+ +K YS+KWR+ I +CIS+V YS++INGRP+ +I SRGIRQGDPLSPFIFVLAMDYL
Sbjct: 526 VLMKKNYSQKWRKMIASCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYL 585
Query: 183 SRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIASG 242
SRLLN +K I GV P+ ++ H++FADDIL+FV+D + Y++NL I+ +FE ASG
Sbjct: 586 SRLLNNLADKRKINGVKFSPNL-NLTHILFADDILIFVEDRDDYVSNLKMILHLFESASG 645
Query: 243 LNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILEKI 302
LNINLSKS I IN+P R + IA SWG + LP SYLG PLGG+PSS +FW +L+KI
Sbjct: 646 LNINLSKSTIFPINVPTDRAKSIADSWGISKGHLPTSYLGMPLGGRPSSSNFWDNVLQKI 705
Query: 303 EKK 306
+KK
Sbjct: 706 QKK 706
BLAST of Lag0006774 vs. NCBI nr
Match:
KAA0041397.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 365.9 bits (938), Expect = 3.3e-97
Identity = 181/303 (59.74%), Postives = 233/303 (76.90%), Query Frame = 0
Query: 3 VFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKPSL 62
+F DF +N+ VN T I+LI K+ +C VSD+RPISLTTA+YKLIAKVLA+RLK +L
Sbjct: 298 IFKDFHSNHTINKVVNETLITLIAKKDNCETVSDFRPISLTTAIYKLIAKVLADRLKQTL 357
Query: 63 PNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFIDV 122
P T++E Q+AFVK RQIT+ IL+ANEA+D+W+ +KK+R +IKLD+EKAFDK++W FID
Sbjct: 358 PYTISELQMAFVKGRQITEAILIANEALDFWR-NKKERGFVIKLDIEKAFDKLNWRFIDF 417
Query: 123 VMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMDYL 182
++ +K YS KWR I +CIS+V YS++INGRP+ +I +RGIRQGDPLSPFIFVLAMDYL
Sbjct: 418 MLMKKNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGIRQGDPLSPFIFVLAMDYL 477
Query: 183 SRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIASG 242
S LL EKG I GV+ GP+ ++ H++FADDIL+FV+D Y++NL I+ +FE ASG
Sbjct: 478 SHLLINLAEKGKINGVNFGPNL-NLTHILFADDILIFVEDKEDYVSNLKMILHLFESASG 537
Query: 243 LNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILEKI 302
LNINLSKS I IN+P R I SWG + LP +YLG PLGGKPSS +FW IL+KI
Sbjct: 538 LNINLSKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNILQKI 597
Query: 303 EKK 306
+KK
Sbjct: 598 QKK 598
BLAST of Lag0006774 vs. NCBI nr
Match:
KAA0037445.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK01919.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 365.5 bits (937), Expect = 4.4e-97
Identity = 173/305 (56.72%), Postives = 238/305 (78.03%), Query Frame = 0
Query: 1 MTVFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKP 60
M +F DF+ KGV+N+N+N TYI+LIPK+ + + D+RPISLTT++YK+IAK L+ RLK
Sbjct: 318 MDIFKDFYDKGVINKNMNNTYIALIPKKKNYSHPKDFRPISLTTSIYKIIAKTLSNRLKT 377
Query: 61 SLPNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFI 120
+LP+T++ NQLAFVK+RQITD IL+ANEA+D+WK KK + ++KLD+EKAFD ++W+FI
Sbjct: 378 ALPDTISGNQLAFVKNRQITDAILMANEALDFWKV-KKIKGFILKLDIEKAFDNLNWDFI 437
Query: 121 DVVMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMD 180
D V+++K + WR+WI+ CIS V+YSVI+NGRP+ +I A+RG+RQGDPLSPF+FV+AMD
Sbjct: 438 DFVLEKKNFPNLWRKWIRGCISNVTYSVIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMD 497
Query: 181 YLSRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIA 240
YLSRLL+ E G I GVSL S+ +I H++FADDILLF++D++ +L NL + +FE A
Sbjct: 498 YLSRLLSHLESSGAIKGVSLN-SNCNISHILFADDILLFIEDNDYFLKNLRMALSLFEKA 557
Query: 241 SGLNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILE 300
SGL INL KSA+ +N+ +R +E A WG + SLP+SYLG PLGG P S FW + +
Sbjct: 558 SGLKINLLKSALVPVNVSVNRAKECASFWGISCHSLPLSYLGVPLGGNPKSNLFWRNVED 617
Query: 301 KIEKK 306
KI+KK
Sbjct: 618 KIQKK 620
BLAST of Lag0006774 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 125.6 bits (314), Expect = 9.9e-28
Identity = 87/309 (28.16%), Postives = 151/309 (48.87%), Query Frame = 0
Query: 1 MTVFHDFFRKGVVNRNVNGTYISLIPKRA-SCTKVSDYRPISLTTALYKLIAKVLAERLK 60
+ +F ++G++ + I LIPK TK ++RPISL K++ K+LA R++
Sbjct: 493 LKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQ 552
Query: 61 PSLPNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEF 120
+ + +Q+ F+ Q I + + + +K K ++I +D EKAFDKI F
Sbjct: 553 QHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRAKDKNHVIISIDAEKAFDKIQQPF 612
Query: 121 IDVVMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAM 180
+ + + G + + I+A + ++I+NG+ E G RQG PLSP +F + +
Sbjct: 613 MLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVL 672
Query: 181 DYLSRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEI 240
+ L+R + +E I G+ LG + +FADD+++++++ NL K+I F
Sbjct: 673 EVLARAIRQEKE---IKGIQLGKEEVKLS--LFADDMIVYLENPIVSAQNLLKLISNFSK 732
Query: 241 ASGLNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPL--GGKPSSESFWHP 300
SG IN+ KS N +I G S I YLG L K + + P
Sbjct: 733 VSGYKINVQKSQAFLYNNNRQTESQIMGELPFTIASKRIKYLGIQLTRDVKDLFKENYKP 792
Query: 301 ILEKIEKKT 307
+L++I++ T
Sbjct: 793 LLKEIKEDT 796
BLAST of Lag0006774 vs. ExPASy Swiss-Prot
Match:
P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)
HSP 1 Score: 118.6 bits (296), Expect = 1.2e-25
Identity = 76/249 (30.52%), Postives = 126/249 (50.60%), Query Frame = 0
Query: 3 VFHDFFRKGVVNRNVNGTYISLIPK-RASCTKVSDYRPISLTTALYKLIAKVLAERLKPS 62
+FH +G + + I+LIPK + TK+ ++RPISL K++ K+LA R++
Sbjct: 502 LFHKIEVEGTLPNSFYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEH 561
Query: 63 LPNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFID 122
+ + +Q+ F+ Q I + + Y K K ++I LD EKAFDKI F+
Sbjct: 562 IKAIIHPDQVGFIPGMQGWFNIRKSINVIHYINKLKDKNHMIISLDAEKAFDKIQHPFMI 621
Query: 123 VVMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMDY 182
V+++ G + IKA S ++ +NG E I G RQG PLSP++F + ++
Sbjct: 622 KVLERSGIQGPYLNMIKAIYSKPVANIKVNGEKLEAIPLKSGTRQGCPLSPYLFNIVLEV 681
Query: 183 LSRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIAS 242
L+R + +E I G+ +G I + ADD+++++ D + L +I F
Sbjct: 682 LARAIRQQKE---IKGIQIGKEEVKIS--LLADDMIVYISDPKNSTRELLNLINSFGEVV 741
Query: 243 GLNINLSKS 251
G IN +KS
Sbjct: 742 GYKINSNKS 745
BLAST of Lag0006774 vs. ExPASy Swiss-Prot
Match:
P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)
HSP 1 Score: 107.1 bits (266), Expect = 3.7e-22
Identity = 70/251 (27.89%), Postives = 127/251 (50.60%), Query Frame = 0
Query: 1 MTVFHDFFRKGVVNRNVNGTYISLIPKRA-SCTKVSDYRPISLTTALYKLIAKVLAERLK 60
+ +F + ++G++ I+LIPK T+ +YRPISL K++ K+L R++
Sbjct: 492 LNLFQNIEKEGILPNTFYEANITLIPKPGKDPTRKENYRPISLMNIDAKILNKILTNRIQ 551
Query: 61 PSLPNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEF 120
+ + +Q+ F+ Q I + + + K K +++ +D EKAFD I F
Sbjct: 552 QHIKKIIHHDQVGFIPGSQGWFNIRKSINVIQHINKLKNKDHMILSIDAEKAFDNIQHPF 611
Query: 121 IDVVMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAM 180
+ +++ G + + I+A S + ++I+NG + G RQG PLSP +F + M
Sbjct: 612 MIRTLKKIGIEGTFLKLIEAIYSKPTANIILNGVKLKSFPLRSGTRQGCPLSPLLFNIVM 671
Query: 181 DYLSRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEI 240
+ L+ A E+ I G+ +G S I +FADD+++++++ L ++IK +
Sbjct: 672 EVLA---IAIREEKAIKGIHIG--SEEIKLSLFADDMIVYLENTRDSTTKLLEVIKEYSN 731
Query: 241 ASGLNINLSKS 251
SG IN KS
Sbjct: 732 VSGYKINTHKS 737
BLAST of Lag0006774 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 95.5 bits (236), Expect = 1.1e-18
Identity = 77/295 (26.10%), Postives = 144/295 (48.81%), Query Frame = 0
Query: 3 VFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKPSL 62
V + F+KG + + +SL+PK+ + ++RP+SL + YK++AK ++ RLK L
Sbjct: 491 VLTEAFKKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVL 550
Query: 63 PNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFIDV 122
+ +Q V R I D + L + + + + + + LD EKAFD++ +++
Sbjct: 551 AEVIHPDQSYTVPGRTIFDNVFLIRDLLHFARRTGLSL-AFLSLDQEKAFDRVDHQYLIG 610
Query: 123 VMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMDYL 182
+Q + ++ ++K ++ V IN + RG+RQG PLS ++ LA++
Sbjct: 611 TLQAYSFGPQFVGYLKTMYASAECLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIEPF 670
Query: 183 SRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIASG 242
LL + + G+ L ++ +ADD++L QD L + +V+ AS
Sbjct: 671 LCLL-----RKRLTGLVLKEPDMRVVLSAYADDVILVAQDLVD-LERAQECQEVYAAASS 730
Query: 243 LNINLSKSAITGINIPDHRIQEIAGSW-GCAHQSLPISYLGAPLGGK--PSSESF 295
IN SKS +G+ ++ + ++ + +S I YLG L + P S++F
Sbjct: 731 ARINWSKS--SGLLEGSLKVDFLPPAFRDISWESKIIKYLGVYLSAEEYPVSQNF 776
BLAST of Lag0006774 vs. ExPASy Swiss-Prot
Match:
Q03274 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1)
HSP 1 Score: 90.9 bits (224), Expect = 2.7e-17
Identity = 66/229 (28.82%), Postives = 114/229 (49.78%), Query Frame = 0
Query: 23 SLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKPSLPNTVAENQLAFVKDRQITDV 82
+LIPK S++RPI++ +AL +L+ ++LA+RL+ ++ A+ A + + +
Sbjct: 62 TLIPKDGDLENPSNWRPITIASALQRLLHRILAKRLEAAVELHPAQKGYARIDGTLVNSL 121
Query: 83 ILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFIDVVMQQKGYSKKWRQWIKACIS 142
+L + + ++K ++ LD+ KAFD +S I +Q+ G + +I +S
Sbjct: 122 LL---DTYISSRREQRKTYNVVSLDVRKAFDTVSHSSICRALQRLGIDEGTSNYITGSLS 181
Query: 143 TVSYSVIIN-GRPKEKIIASRGIRQGDPLSPFIFVLAMDYLSRLLNATEEKGLIAGVSLG 202
+ ++ + G KI RG++QGDPLSPF+F +D L L +T G G
Sbjct: 182 DSTTTIRVGPGSQTRKICIRRGVKQGDPLSPFLFNAVLDELLCSLQSTPGIGGTIG---- 241
Query: 203 PSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIASGLNINLSKS 251
I L FADD+LL +D L + F + G+++N KS
Sbjct: 242 --EEKIPVLAFADDLLLLEDNDVLLPTTLATVANFFRL-RGMSLNAKKS 280
BLAST of Lag0006774 vs. ExPASy TrEMBL
Match:
A0A5D3BJP3 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005410 PE=4 SV=1)
HSP 1 Score: 373.2 bits (957), Expect = 1.0e-99
Identity = 182/303 (60.07%), Postives = 239/303 (78.88%), Query Frame = 0
Query: 3 VFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKPSL 62
+F DF +N+ VN T I+ I K+ +C V+D+RPISLTTA+YKLIAKVLA+RLK +L
Sbjct: 406 IFKDFHSNHTINKVVNETLITFIAKKENCETVADFRPISLTTAIYKLIAKVLADRLKQTL 465
Query: 63 PNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFIDV 122
P+T++E+Q+AFVK RQIT+ IL+ANEA+D W+ +KK+R +IKLD+EKAFDK++W FID
Sbjct: 466 PDTISESQMAFVKGRQITEAILIANEALDLWR-NKKERGFVIKLDIEKAFDKLNWRFIDF 525
Query: 123 VMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMDYL 182
++ +K YS+KWR+ I +CIS+V YS++INGRP+ +I SRGIRQGDPLSPFIFVLAMDYL
Sbjct: 526 MLMKKNYSQKWRKMIASCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYL 585
Query: 183 SRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIASG 242
SRLLN +KG I GV+ GP+ ++ H++FADDIL+FV+D + Y++NL I+ +FE ASG
Sbjct: 586 SRLLNNLADKGKINGVNFGPNL-NLTHILFADDILIFVEDKDDYVSNLKMILHLFESASG 645
Query: 243 LNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILEKI 302
LNINLSKS I IN+P R IA SWG + LP SYLG PLGGKPSS +FW +L+KI
Sbjct: 646 LNINLSKSTIFPINVPADRANSIADSWGISKGHLPTSYLGMPLGGKPSSSNFWDNVLQKI 705
Query: 303 EKK 306
+KK
Sbjct: 706 QKK 706
BLAST of Lag0006774 vs. ExPASy TrEMBL
Match:
A0A5A7TTK1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00450 PE=4 SV=1)
HSP 1 Score: 373.2 bits (957), Expect = 1.0e-99
Identity = 178/305 (58.36%), Postives = 239/305 (78.36%), Query Frame = 0
Query: 1 MTVFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKP 60
M +F DF+ KGV+N+N+N TYI+LIPK+ + D+RPISLTT++YK+IAK L+ RLK
Sbjct: 318 MDIFKDFYDKGVINKNMNNTYIALIPKKKDFSNPKDFRPISLTTSIYKIIAKTLSNRLKT 377
Query: 61 SLPNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFI 120
SLPNT++ENQLAFVK+RQITD IL+ANEAVD+WK KK + ++KLD+EKAFD ++W+FI
Sbjct: 378 SLPNTISENQLAFVKNRQITDAILMANEAVDFWKV-KKIKGFILKLDIEKAFDNLNWDFI 437
Query: 121 DVVMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMD 180
D V+++K + WR+WI+ CIS V+YS+I+NGRP+ +I A+RG+RQGDPLSPF+FV+AMD
Sbjct: 438 DFVLEKKNFPILWRKWIRGCISNVTYSIIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMD 497
Query: 181 YLSRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIA 240
YLSRLL+ E G I GVS S+ +I H++FADDILLF++D++ +LNNL + +FE A
Sbjct: 498 YLSRLLSHLEITGAIKGVSFS-SNCNISHILFADDILLFIEDNDFFLNNLRMALSLFERA 557
Query: 241 SGLNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILE 300
SGL INL KSA+ +N+ + R +E A WG + QSLP+SYLG PLGG P S FW + E
Sbjct: 558 SGLKINLLKSALVPMNVSEIRAKECASFWGISSQSLPLSYLGVPLGGNPKSRLFWSNVEE 617
Query: 301 KIEKK 306
KI+KK
Sbjct: 618 KIQKK 620
BLAST of Lag0006774 vs. ExPASy TrEMBL
Match:
A0A5A7T9I7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00980 PE=4 SV=1)
HSP 1 Score: 369.0 bits (946), Expect = 1.9e-98
Identity = 180/303 (59.41%), Postives = 237/303 (78.22%), Query Frame = 0
Query: 3 VFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKPSL 62
+F DF ++N+ VN T I+LI K+ C +D+RPISLTTA+YKLIAK LA+RLK +L
Sbjct: 406 IFKDFHSTHIINKVVNETLITLIAKKEHCETAADFRPISLTTAIYKLIAKTLADRLKQTL 465
Query: 63 PNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFIDV 122
P+T++E+Q+AFVK RQIT+ IL+ANEA+D+W+ SKK+R +IKLD+EKAFDK++W FID
Sbjct: 466 PDTISESQMAFVKGRQITEAILIANEALDFWR-SKKERGFVIKLDIEKAFDKLNWRFIDF 525
Query: 123 VMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMDYL 182
V+ +K YS+KWR+ I +CIS+V YS++INGRP+ +I SRGIRQGDPLSPFIFVLAMDYL
Sbjct: 526 VLMKKNYSQKWRKMIASCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYL 585
Query: 183 SRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIASG 242
SRLLN +K I GV P+ ++ H++FADDIL+FV+D + Y++NL I+ +FE ASG
Sbjct: 586 SRLLNNLADKRKINGVKFSPNL-NLTHILFADDILIFVEDRDDYVSNLKMILHLFESASG 645
Query: 243 LNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILEKI 302
LNINLSKS I IN+P R + IA SWG + LP SYLG PLGG+PSS +FW +L+KI
Sbjct: 646 LNINLSKSTIFPINVPTDRAKSIADSWGISKGHLPTSYLGMPLGGRPSSSNFWDNVLQKI 705
Query: 303 EKK 306
+KK
Sbjct: 706 QKK 706
BLAST of Lag0006774 vs. ExPASy TrEMBL
Match:
A0A5A7TIB8 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00430 PE=4 SV=1)
HSP 1 Score: 365.9 bits (938), Expect = 1.6e-97
Identity = 181/303 (59.74%), Postives = 233/303 (76.90%), Query Frame = 0
Query: 3 VFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKPSL 62
+F DF +N+ VN T I+LI K+ +C VSD+RPISLTTA+YKLIAKVLA+RLK +L
Sbjct: 298 IFKDFHSNHTINKVVNETLITLIAKKDNCETVSDFRPISLTTAIYKLIAKVLADRLKQTL 357
Query: 63 PNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFIDV 122
P T++E Q+AFVK RQIT+ IL+ANEA+D+W+ +KK+R +IKLD+EKAFDK++W FID
Sbjct: 358 PYTISELQMAFVKGRQITEAILIANEALDFWR-NKKERGFVIKLDIEKAFDKLNWRFIDF 417
Query: 123 VMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMDYL 182
++ +K YS KWR I +CIS+V YS++INGRP+ +I +RGIRQGDPLSPFIFVLAMDYL
Sbjct: 418 MLMKKNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGIRQGDPLSPFIFVLAMDYL 477
Query: 183 SRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIASG 242
S LL EKG I GV+ GP+ ++ H++FADDIL+FV+D Y++NL I+ +FE ASG
Sbjct: 478 SHLLINLAEKGKINGVNFGPNL-NLTHILFADDILIFVEDKEDYVSNLKMILHLFESASG 537
Query: 243 LNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILEKI 302
LNINLSKS I IN+P R I SWG + LP +YLG PLGGKPSS +FW IL+KI
Sbjct: 538 LNINLSKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNILQKI 597
Query: 303 EKK 306
+KK
Sbjct: 598 QKK 598
BLAST of Lag0006774 vs. ExPASy TrEMBL
Match:
A0A5D3BUZ3 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00050 PE=4 SV=1)
HSP 1 Score: 365.5 bits (937), Expect = 2.1e-97
Identity = 173/305 (56.72%), Postives = 238/305 (78.03%), Query Frame = 0
Query: 1 MTVFHDFFRKGVVNRNVNGTYISLIPKRASCTKVSDYRPISLTTALYKLIAKVLAERLKP 60
M +F DF+ KGV+N+N+N TYI+LIPK+ + + D+RPISLTT++YK+IAK L+ RLK
Sbjct: 318 MDIFKDFYDKGVINKNMNNTYIALIPKKKNYSHPKDFRPISLTTSIYKIIAKTLSNRLKT 377
Query: 61 SLPNTVAENQLAFVKDRQITDVILLANEAVDYWKCSKKKRDIMIKLDLEKAFDKISWEFI 120
+LP+T++ NQLAFVK+RQITD IL+ANEA+D+WK KK + ++KLD+EKAFD ++W+FI
Sbjct: 378 ALPDTISGNQLAFVKNRQITDAILMANEALDFWKV-KKIKGFILKLDIEKAFDNLNWDFI 437
Query: 121 DVVMQQKGYSKKWRQWIKACISTVSYSVIINGRPKEKIIASRGIRQGDPLSPFIFVLAMD 180
D V+++K + WR+WI+ CIS V+YSVI+NGRP+ +I A+RG+RQGDPLSPF+FV+AMD
Sbjct: 438 DFVLEKKNFPNLWRKWIRGCISNVTYSVIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMD 497
Query: 181 YLSRLLNATEEKGLIAGVSLGPSSPSIMHLMFADDILLFVQDDNSYLNNLFKIIKVFEIA 240
YLSRLL+ E G I GVSL S+ +I H++FADDILLF++D++ +L NL + +FE A
Sbjct: 498 YLSRLLSHLESSGAIKGVSLN-SNCNISHILFADDILLFIEDNDYFLKNLRMALSLFEKA 557
Query: 241 SGLNINLSKSAITGINIPDHRIQEIAGSWGCAHQSLPISYLGAPLGGKPSSESFWHPILE 300
SGL INL KSA+ +N+ +R +E A WG + SLP+SYLG PLGG P S FW + +
Sbjct: 558 SGLKINLLKSALVPVNVSVNRAKECASFWGISCHSLPLSYLGVPLGGNPKSNLFWRNVED 617
Query: 301 KIEKK 306
KI+KK
Sbjct: 618 KIQKK 620
BLAST of Lag0006774 vs. TAIR 10
Match:
ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )
HSP 1 Score: 76.6 bits (187), Expect = 3.8e-14
Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 0
Query: 149 IINGRPKEKIIASRGIRQGDPLSPFIFVLAMDYLSRLLNATEEKGLIAGVSLGPSSPSIM 208
IING P+ + SRG+RQGDPLSP++F+L + LS L +E+G + G+ + +SP I
Sbjct: 13 IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72
Query: 209 HLMFADD 216
HL+FADD
Sbjct: 73 HLLFADD 79
BLAST of Lag0006774 vs. TAIR 10
Match:
AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )
HSP 1 Score: 58.2 bits (139), Expect = 1.4e-08
Identity = 29/81 (35.80%), Postives = 48/81 (59.26%), Query Frame = 0
Query: 54 LAERLKPSLPNTVAENQLAFVKDRQITDVILLANEAVDYWKCSK-KKRDIMIKLDLEKAF 113
+ ERLKP + N + Q +F+ R TD I+ EAV + K K +++KLDLEKA+
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60
Query: 114 DKISWEFIDVVMQQKGYSKKW 134
D+I W++++ + G+ + W
Sbjct: 61 DRIRWDYLEDTLISAGFPEVW 81
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0046762.1 | 2.1e-99 | 58.36 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
TYJ99326.1 | 2.1e-99 | 60.07 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
KAA0039950.1 | 3.9e-98 | 59.41 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK245... | [more] |
KAA0041397.1 | 3.3e-97 | 59.74 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
KAA0037445.1 | 4.4e-97 | 56.72 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK019... | [more] |
Match Name | E-value | Identity | Description | |
O00370 | 9.9e-28 | 28.16 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
P11369 | 1.2e-25 | 30.52 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... | [more] |
P08548 | 3.7e-22 | 27.89 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 | [more] |
P14381 | 1.1e-18 | 26.10 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
Q03274 | 2.7e-17 | 28.82 | Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fra... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3BJP3 | 1.0e-99 | 60.07 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5A7TTK1 | 1.0e-99 | 58.36 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5A7T9I7 | 1.9e-98 | 59.41 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5A7TIB8 | 1.6e-97 | 59.74 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3BUZ3 | 2.1e-97 | 56.72 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
Match Name | E-value | Identity | Description | |
ATMG01250.1 | 3.8e-14 | 49.25 | RNA-directed DNA polymerase (reverse transcriptase) | [more] |
AT4G20520.1 | 1.4e-08 | 35.80 | RNA binding;RNA-directed DNA polymerases | [more] |