Lag0006757 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0006757
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Transposon TX1 uncharacterized 149 kDa protein
Location	chr6: 45573004 .. 45574455 (+)
RNA-Seq Expression	Lag0006757
Synteny	Lag0006757

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAAATTCAACAAATTCATTGAATTAGCTGCCTTACAGGACATCCCCCTCTCGAATGGCAAGTATACTTGGTCCAACTTTCACCCAAATCCCACCATGACTCTCATTGACAGATTTCTGCTTTCTGATAACATCCCCATCAAATTCGGTTCTGCCAAAGTTCGTAGGCTTGAAAGAGTCACTTCAGACCATTATCCTATTTGTCTTACCTTGGGGAAAGAACATTGGGGCCCTACCCCTTTCCAATTCATAAATGCTCGACTTTCTCACCACTCTTTTTTACACACGGTTGAAGCTTGGTGGAAAATCACTCAATCACAAGGATGGCCTGGTCATGGATTTATTCAAAAACTAAAAGGGCTGAAAAAGGAACTAAAACATTGGAATCATCATACTTTTGGGCAGCAAAAGAAACAGAGAAACAGACCTGGACAAGGGCTTTATATTTTTGATAATAGGGAGGAAATGGACCAATTATCCGAGCAAGATATCAATAGAAGAGCTGAGATCAAAGCTGAATTGATCACTCTGTCAGCAAATGAAGAGATTATGTGGTGCCAAAGATGCAAGTCAAAATGATTTGTTGAGGGAGATGTTAATACAACCTTTTTCCATCGCCTCGTGGCAGCAAATAGAAGAAGAAGCTCCATTGTGGAGATTTTATCAGCGGTAGTTAACAACCTTATAAACGATGATGATATTGAAAAAGAATTTTTAGCCTTCTATCAAAAGCTTTATACTAAAAAAGGCAGCAGGAACCCCTTACCCGATATTGGTGACTGGATGCCTATCTCAATGGAACAGAGGATAGATTTAGAGGCCCCTTTCACTGAAGCTGAAATTTATAAAGCAGTACAAGATTTAGGCACAAATAAGACCCCGAATCCCGATAGCTTTACAGCGGCGTTCTTTAAAAAATCTTGGAATATCCTTAAGGAGGATGTAAAAGGGTTGTTCAATGATTTTTTTAGGAATGGAATCATCAATACAAATTTAAATGAGACATATATTTGCCTTATTTCTAAGAAGGTTGGAGCAAAATTAGTGGGTGATTATAGGCCAATTAGCTTGACAACTTGTCTCTATAAAAATAGGAAAATTTGTACAGATGACCCATTTTCGGGACCATAAATGAAATTTACCCTATCTTTTCAGAATAATGAGAATGCCCTATTGCTGATGTCACTGCGCACATTTTATGACCGTGTCGTCCCTCCAGGCCAGCCAGATCGATTCCTGCTCTCGGTACACGCTCTCGTTGTTCTCTTAGAAAGATTGAAGAAAGTCCTCCCTTACACGATCACAAATTTTCAATCAACGTTTGTAGAAAACCAACGAATCATGGACGCATCTTCAATTGCAAATGAGCTTATCGACGAATGGAATAGAATAAAAAAGAAAGGAATGGTCATAAAACTCGACATTGAAGCTTTTGGCATGGTGGATTGA

mRNA sequence

ATGAGAAAATTCAACAAATTCATTGAATTAGCTGCCTTACAGGACATCCCCCTCTCGAATGGCAAGTATACTTGGTCCAACTTTCACCCAAATCCCACCATGACTCTCATTGACAGATTTCTGCTTTCTGATAACATCCCCATCAAATTCGGTTCTGCCAAAGTTCGTAGGCTTGAAAGAGTCACTTCAGACCATTATCCTATTTGTCTTACCTTGGGGAAAGAACATTGGGGCCCTACCCCTTTCCAATTCATAAATGCTCGACTTTCTCACCACTCTTTTTTACACACGGTTGAAGCTTGGTGGAAAATCACTCAATCACAAGGATGGCCTGGTCATGGATTTATTCAAAAACTAAAAGGGCTGAAAAAGGAACTAAAACATTGGAATCATCATACTTTTGGGCAGCAAAAGAAACAGAGAAACAGACCTGGACAAGGGCTTTATATTTTTGATAATAGGGAGGAAATGGACCAATTATCCGAGCAAGATATCAATAGAAGAGCTGAGATCAAAGCTGAATTGATCACTCTGTCAGCAAATGAAGAGATTATGTGCAGGAACCCCTTACCCGATATTGGTGACTGGATGCCTATCTCAATGGAACAGAGGATAGATTTAGAGGCCCCTTTCACTGAAGCTGAAATTTATAAAGCAGTACAAGATTTAGGCACAAATAAGACCCCGAATCCCGATAGCTTTACAGCGGCGTTCTTTAAAAAATCTTGGAATATCCTTAAGGAGGATAATAATGAGAATGCCCTATTGCTGATGTCACTGCGCACATTTTATGACCGTGTCGTCCCTCCAGGCCAGCCAGATCGATTCCTGCTCTCGGTACACGCTCTCGTTGTTCTCTTAGAAAGATTGAAGAAAGTCCTCCCTTACACGATCACAAATTTTCAATCAACGTTTGTAGAAAACCAACGAATCATGGACGCATCTTCAATTGCAAATGAGCTTATCGACGAATGGAATAGAATAAAAAAGAAAGGAATGGTCATAAAACTCGACATTGAAGCTTTTGGCATGGTGGATTGA

Coding sequence (CDS)

ATGAGAAAATTCAACAAATTCATTGAATTAGCTGCCTTACAGGACATCCCCCTCTCGAATGGCAAGTATACTTGGTCCAACTTTCACCCAAATCCCACCATGACTCTCATTGACAGATTTCTGCTTTCTGATAACATCCCCATCAAATTCGGTTCTGCCAAAGTTCGTAGGCTTGAAAGAGTCACTTCAGACCATTATCCTATTTGTCTTACCTTGGGGAAAGAACATTGGGGCCCTACCCCTTTCCAATTCATAAATGCTCGACTTTCTCACCACTCTTTTTTACACACGGTTGAAGCTTGGTGGAAAATCACTCAATCACAAGGATGGCCTGGTCATGGATTTATTCAAAAACTAAAAGGGCTGAAAAAGGAACTAAAACATTGGAATCATCATACTTTTGGGCAGCAAAAGAAACAGAGAAACAGACCTGGACAAGGGCTTTATATTTTTGATAATAGGGAGGAAATGGACCAATTATCCGAGCAAGATATCAATAGAAGAGCTGAGATCAAAGCTGAATTGATCACTCTGTCAGCAAATGAAGAGATTATGTGCAGGAACCCCTTACCCGATATTGGTGACTGGATGCCTATCTCAATGGAACAGAGGATAGATTTAGAGGCCCCTTTCACTGAAGCTGAAATTTATAAAGCAGTACAAGATTTAGGCACAAATAAGACCCCGAATCCCGATAGCTTTACAGCGGCGTTCTTTAAAAAATCTTGGAATATCCTTAAGGAGGATAATAATGAGAATGCCCTATTGCTGATGTCACTGCGCACATTTTATGACCGTGTCGTCCCTCCAGGCCAGCCAGATCGATTCCTGCTCTCGGTACACGCTCTCGTTGTTCTCTTAGAAAGATTGAAGAAAGTCCTCCCTTACACGATCACAAATTTTCAATCAACGTTTGTAGAAAACCAACGAATCATGGACGCATCTTCAATTGCAAATGAGCTTATCGACGAATGGAATAGAATAAAAAAGAAAGGAATGGTCATAAAACTCGACATTGAAGCTTTTGGCATGGTGGATTGA

Protein sequence

MRKFNKFIELAALQDIPLSNGKYTWSNFHPNPTMTLIDRFLLSDNIPIKFGSAKVRRLERVTSDHYPICLTLGKEHWGPTPFQFINARLSHHSFLHTVEAWWKITQSQGWPGHGFIQKLKGLKKELKHWNHHTFGQQKKQRNRPGQGLYIFDNREEMDQLSEQDINRRAEIKAELITLSANEEIMCRNPLPDIGDWMPISMEQRIDLEAPFTEAEIYKAVQDLGTNKTPNPDSFTAAFFKKSWNILKEDNNENALLLMSLRTFYDRVVPPGQPDRFLLSVHALVVLLERLKKVLPYTITNFQSTFVENQRIMDASSIANELIDEWNRIKKKGMVIKLDIEAFGMVD

Homology

[Close]

BLAST of Lag0006757 vs. NCBI nr
Match: RVW53010.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 216.9 bits (551), Expect = 2.8e-52
Identity = 136/369 (36.86%), Postives = 192/369 (52.03%), Query Frame = 0


Query: 1    MRKFNKFIELAALQDIPLSNGKYTWSNFHPNPTMTLIDRFLLSDNIPIKFGSAKVRRLER 60
            M+ F++FI    L D PL +  YTWSN   NP    +DRFL S+     F  +    L R
Sbjct: 695  MKDFDEFIRDCELIDSPLRSVSYTWSNMQENPVCKRLDRFLYSNEWEQVFPQSLQGVLPR 754

Query: 61   VTSDHYPICLTLGKEHWGPTPFQFINARLSHHSFLHTVEAWWKITQSQGWPGHGFIQKLK 120
             TSDH+PI L      WGPTPF+F N  L H SF      WW   Q  GW GH F++KL+
Sbjct: 755  WTSDHWPIVLETNPFKWGPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMRKLQ 814

Query: 121  GLKKELKHWNHHTFGQQKKQRNRPGQGLYIFDNREEMDQLSEQDINRRAEIKAELITLSA 180
             +K +LK WN  +FG+  K++      L  FD+ E+   LS++ + +RA  K EL     
Sbjct: 815  LVKAKLKEWNKTSFGELSKKKKDILAVLANFDSLEQEGGLSQELLVQRAFSKGEL-EEEY 874

Query: 181  NEEIM----------CRNPLPDIG-DWMPISMEQRIDLEAPFTEAEIYKAVQDLGTNKTP 240
             EEI+           R      G DW PI  E    LE+PFTE EIYKA+  +  +K P
Sbjct: 875  KEEILKYFEKLYACPSRESWRVEGLDWSPIDGESASRLESPFTEEEIYKAIFQMDRDKAP 934

Query: 241  NPDSFTAAFFKKSWNILKED---------------NNENALLLMSL-RTFYDRVVPPGQP 300
             PD FT A F+  W+++KED                + NA  ++ L +    R +   +P
Sbjct: 935  GPDGFTIAVFQDCWDVIKEDLVRVFAEFHRSGIINQSTNASFIVLLPKKSISRRISDFRP 994

Query: 301  DRFLLSVHALV--VLLERLKKVLPYTITNFQSTFVENQRIMDASSIANELIDEWNRIKKK 341
               + S++ ++  VL  RL+ VL  TI + Q  FV+ ++I+DA  IANE++DE  R  ++
Sbjct: 995  ISLITSLYKIIAKVLAGRLRGVLHETIHSTQGAFVQGRQILDAVLIANEIVDEKRRTGEE 1054

[Close]

BLAST of Lag0006757 vs. NCBI nr
Match: RVW96070.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 216.5 bits (550), Expect = 3.7e-52
Identity = 134/386 (34.72%), Postives = 194/386 (50.26%), Query Frame = 0


Query: 1    MRKFNKFIELAALQDIPLSNGKYTWSNFHPNPTMTLIDRFLLSDNIPIKFGSAKVRRLER 60
            M+ F+ FI    L D+PL +  +TWSN   NP    +DRFL S+     +  +    L R
Sbjct: 660  MKDFDDFIRDCELIDLPLRSASFTWSNMQENPVCKRLDRFLYSNEWEQAYPQSIQGVLPR 719

Query: 61   VTSDHYPICLTLGKEHWGPTPFQFINARLSHHSFLHTVEAWWKITQSQGWPGHGFIQKLK 120
             TSDH+PI L      WGPTPF+F N  L H SF  +   WW+  Q  GW GH F++KL+
Sbjct: 720  WTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKESFGRWWREFQGNGWEGHKFMRKLQ 779

Query: 121  GLKKELKHWNHHTFGQQKKQRNRPGQGLYIFDNREEMDQLSEQDINRRAEIKAELITLSA 180
             +K +LK WN  +FG+  K++      L  FD+ E+   LS + + +RA  K EL  L  
Sbjct: 780  FVKAKLKEWNKASFGELSKRKKDILSDLVNFDSLEQEGGLSHELLAQRALRKGELEELIL 839

Query: 181  NEEIMCR-----------------------NPLPDIG-----DWMPISMEQRIDLEAPFT 240
             EEI  R                       +P  D       DW PIS E    LE+PFT
Sbjct: 840  REEIHWRQKARVKWESIKEEILRYFEKLYTSPSGDPWRVEGLDWSPISGESAFRLESPFT 899

Query: 241  EAEIYKAVQDLGTNKTPNPDSFTAAFFKKSWNILKED---------------NNENALLL 300
            E EI+K +  +  +K P PD FT A F+  W ++KED                + NA  +
Sbjct: 900  EEEIFKVIFQMDRDKAPGPDGFTIAVFQDCWEVIKEDLVKVFAEFHRSGIINQSTNASFI 959

Query: 301  MSL-RTFYDRVVPPGQPDRFLLSVHALV--VLLERLKKVLPYTITNFQSTFVENQRIMDA 341
            + L +    R +   +P   + S++ ++  VL  R++ VL  TI + Q  FV+ ++I+DA
Sbjct: 960  VLLPKKNMSRRISDFRPISLITSLYKIIAKVLAGRIRGVLHETIHSTQGAFVQGRQILDA 1019

[Close]

BLAST of Lag0006757 vs. NCBI nr
Match: RVX11537.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 213.8 bits (543), Expect = 2.4e-51
Identity = 134/390 (34.36%), Postives = 191/390 (48.97%), Query Frame = 0


Query: 1    MRKFNKFIELAALQDIPLSNGKYTWSNFHPNPTMTLIDRFLLSDNIPIKFGSAKVRRLER 60
            MR F++FI  + L D PL N  +TWSN   +P    +DRFL S      F  +    L R
Sbjct: 900  MRCFDEFIRESGLLDPPLRNAAFTWSNMQADPICKRLDRFLFSSEWDTFFSQSFQEALPR 959

Query: 61   VTSDHYPICLTLGKEHWGPTPFQFINARLSHHSFLHTVEAWWKITQSQGWPGHGFIQKLK 120
             TSDH PICL      WGPTPF+F N  L H  F      WW     +GW GH F++KLK
Sbjct: 960  WTSDHNPICLETNPLKWGPTPFRFENMWLLHPEFKEKFRVWWLECTGEGWEGHKFMRKLK 1019

Query: 121  GLKKELKHWNHHTFGQQKKQRNRPGQGLYIFDNREEMDQLSEQDINRRAEIKAELITLSA 180
             +K +LK WN  TFG  K+++      L   D  E+   L+   +  R   + EL  +  
Sbjct: 1020 FVKSKLKEWNIMTFGDLKERKKLILTDLSRIDLIEQEGNLNSDLVLERTLKRRELEDVLL 1079

Query: 181  NEEIMCRNPLP-------------------------DIGDWMPISMEQRIDLEAPFTEAE 240
             EE+  R                             +  DW+PIS E  + L+ PFTE E
Sbjct: 1080 KEEVQWRQKSKVKWIKEGDCNSKFFHRVATGESWRVEGIDWVPISDESGVWLDRPFTEEE 1139

Query: 241  IYKAVQDLGTNKTPNPDSFTAAFFKKSWNILKED-------NNENALLLMSLRTFYDRVV 300
            + +AV  L   K P PD FT A +++ W+++KED        + N ++  S    +  +V
Sbjct: 1140 VRRAVFQLNKEKAPGPDGFTIAVYQECWDVIKEDLMRVFLEFHTNGVINQSTNATFIALV 1199

Query: 301  PPG---------QPDRFLLSVHALV--VLLERLKKVLPYTITNFQSTFVENQRIMDASSI 347
            P           +P   + S++ ++  VL  RL+KVL  TI++ Q  FVE + I+DA  I
Sbjct: 1200 PKKSQSVKISDYRPISLVTSLYKIIAKVLSGRLRKVLHETISDSQGAFVEGRHILDAVLI 1259

[Close]

BLAST of Lag0006757 vs. NCBI nr
Match: RVX11275.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 213.0 bits (541), Expect = 4.1e-51
Identity = 137/400 (34.25%), Postives = 190/400 (47.50%), Query Frame = 0


Query: 1   MRKFNKFIELAALQDIPLSNGKYTWSNFHPNPTMTLIDRFLLSDNIPIKFGSAKVRRLER 60
           M+ F++FI    L D PL +  YTWSN   NP    +DRFL S+     F  +    L R
Sbjct: 217 MKDFDEFIRDCELIDSPLRSASYTWSNMQENPVCKRLDRFLYSNEWEQVFPQSLQGVLPR 276

Query: 61  VTSDHYPICLTLGKEHWGPTPFQFINARLSHHSFLHTVEAWWKITQSQGWPGHGFIQKLK 120
            TSDH+PI L      WGPTPF+F N  L H SF      WW   Q  GW GH F++KL+
Sbjct: 277 WTSDHWPIVLETNPFKWGPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMRKLQ 336

Query: 121 GLKKELKHWNHHTFGQQKKQRNRPGQGLYIFDNREEMDQLSEQDINRRAEIKAELITLSA 180
            +K +LK WN  +FG+  K++      L  FD+ E+   LS + + +RA  K EL  L  
Sbjct: 337 FVKAKLKEWNKTSFGELSKKKKDILAVLANFDSLEQEGGLSHELLVQRALSKGELEELIL 396

Query: 181 NEEIMCRNPLPDI------------------------------------------GDWMP 240
            EEI  R  L                                              DW P
Sbjct: 397 REEIHWRQKLGKFIKELENESGLMLNNPESIKEEILRYFEKLYASSSGESWRVEGLDWSP 456

Query: 241 ISMEQRIDLEAPFTEAEIYKAVQDLGTNKTPNPDSFTAAFFKKSWNILKED--------- 300
           I  E    LE PFTE EIYKA+  +  +K P PD FT A F+  W+++KED         
Sbjct: 457 IDGESASRLEFPFTEEEIYKAIFQMDRDKAPGPDGFTIAVFQDCWDVIKEDLVRVFAEFH 516

Query: 301 ------NNENALLLMSL-RTFYDRVVPPGQPDRFLLSVHALV--VLLERLKKVLPYTITN 341
                  + NA  ++ L +    R +   +P   + S++ ++  VL  RL+ VL  TI +
Sbjct: 517 RSGIINQSTNASFIVLLPKKSMSRRISDFRPISLITSLYKIIAKVLAGRLRGVLHETIHS 576

[Close]

BLAST of Lag0006757 vs. NCBI nr
Match: RVW25035.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 209.9 bits (533), Expect = 3.5e-50
Identity = 133/390 (34.10%), Postives = 189/390 (48.46%), Query Frame = 0


Query: 1    MRKFNKFIELAALQDIPLSNGKYTWSNFHPNPTMTLIDRFLLSDNIPIKFGSAKVRRLER 60
            MR F++FI  + L D PL N  +TWSN   +P    +DRFL S      F  +    L R
Sbjct: 1815 MRCFDEFIRESGLLDPPLRNAAFTWSNMQADPICKRLDRFLFSSEWDTFFSQSFQEALPR 1874

Query: 61   VTSDHYPICLTLGKEHWGPTPFQFINARLSHHSFLHTVEAWWKITQSQGWPGHGFIQKLK 120
             TSDH PICL      WGPTPF+F N  L H  F      WW+    +GW GH F++KLK
Sbjct: 1875 WTSDHSPICLETNPLKWGPTPFRFENMWLLHPEFKEKFRVWWQECTGEGWEGHKFMRKLK 1934

Query: 121  GLKKELKHWNHHTFGQQKKQRNRPGQGLYIFDNREEMDQLSEQDINRRAEIKAELITLSA 180
             +K +LK WN  TFG  K+++      L   D  E+   L+   +  R   + EL  +  
Sbjct: 1935 FVKLKLKKWNIMTFGDLKERKKLILTDLSRIDLIEQEGNLNPDLVLERTLRRKELEDVLL 1994

Query: 181  NEEIMCRNP-------------------------LPDIGDWMPISMEQRIDLEAPFTEAE 240
             EE+  R                             +  DW+PIS E  + L+ PFTE E
Sbjct: 1995 KEEVQWRQKSRVKWIKEGDCNSKFFHRVATGESWRVEGIDWVPISGESGVWLDRPFTEEE 2054

Query: 241  IYKAVQDLGTNKTPNPDSFTAAFFKKSWNILKED-------NNENALLLMSLRTFYDRVV 300
            +   V  L   K P PD FT A +++ W+++KED        + N ++  S    +  +V
Sbjct: 2055 VRMTVFQLNKEKAPGPDGFTIAVYQECWDVIKEDLMRVFLEFHTNGVINQSTNATFIALV 2114

Query: 301  PPG---------QPDRFLLSVHALV--VLLERLKKVLPYTITNFQSTFVENQRIMDASSI 347
            P           +P   + S++ ++  VL  RL+KVL  TI+  Q  FVE + I+DA  I
Sbjct: 2115 PKKSQSFKISDYRPISLVTSLYKIIAKVLSGRLRKVLHETISGSQGAFVEGRHILDAVLI 2174

[Close]

BLAST of Lag0006757 vs. ExPASy TrEMBL
Match: A0A438EZ36 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_24 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.4e-52
Identity = 136/369 (36.86%), Postives = 192/369 (52.03%), Query Frame = 0


Query: 1    MRKFNKFIELAALQDIPLSNGKYTWSNFHPNPTMTLIDRFLLSDNIPIKFGSAKVRRLER 60
            M+ F++FI    L D PL +  YTWSN   NP    +DRFL S+     F  +    L R
Sbjct: 695  MKDFDEFIRDCELIDSPLRSVSYTWSNMQENPVCKRLDRFLYSNEWEQVFPQSLQGVLPR 754

Query: 61   VTSDHYPICLTLGKEHWGPTPFQFINARLSHHSFLHTVEAWWKITQSQGWPGHGFIQKLK 120
             TSDH+PI L      WGPTPF+F N  L H SF      WW   Q  GW GH F++KL+
Sbjct: 755  WTSDHWPIVLETNPFKWGPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMRKLQ 814

Query: 121  GLKKELKHWNHHTFGQQKKQRNRPGQGLYIFDNREEMDQLSEQDINRRAEIKAELITLSA 180
             +K +LK WN  +FG+  K++      L  FD+ E+   LS++ + +RA  K EL     
Sbjct: 815  LVKAKLKEWNKTSFGELSKKKKDILAVLANFDSLEQEGGLSQELLVQRAFSKGEL-EEEY 874

Query: 181  NEEIM----------CRNPLPDIG-DWMPISMEQRIDLEAPFTEAEIYKAVQDLGTNKTP 240
             EEI+           R      G DW PI  E    LE+PFTE EIYKA+  +  +K P
Sbjct: 875  KEEILKYFEKLYACPSRESWRVEGLDWSPIDGESASRLESPFTEEEIYKAIFQMDRDKAP 934

Query: 241  NPDSFTAAFFKKSWNILKED---------------NNENALLLMSL-RTFYDRVVPPGQP 300
             PD FT A F+  W+++KED                + NA  ++ L +    R +   +P
Sbjct: 935  GPDGFTIAVFQDCWDVIKEDLVRVFAEFHRSGIINQSTNASFIVLLPKKSISRRISDFRP 994

Query: 301  DRFLLSVHALV--VLLERLKKVLPYTITNFQSTFVENQRIMDASSIANELIDEWNRIKKK 341
               + S++ ++  VL  RL+ VL  TI + Q  FV+ ++I+DA  IANE++DE  R  ++
Sbjct: 995  ISLITSLYKIIAKVLAGRLRGVLHETIHSTQGAFVQGRQILDAVLIANEIVDEKRRTGEE 1054

[Close]

BLAST of Lag0006757 vs. ExPASy TrEMBL
Match: A0A438IH50 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_461 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-52
Identity = 134/386 (34.72%), Postives = 194/386 (50.26%), Query Frame = 0


Query: 1    MRKFNKFIELAALQDIPLSNGKYTWSNFHPNPTMTLIDRFLLSDNIPIKFGSAKVRRLER 60
            M+ F+ FI    L D+PL +  +TWSN   NP    +DRFL S+     +  +    L R
Sbjct: 660  MKDFDDFIRDCELIDLPLRSASFTWSNMQENPVCKRLDRFLYSNEWEQAYPQSIQGVLPR 719

Query: 61   VTSDHYPICLTLGKEHWGPTPFQFINARLSHHSFLHTVEAWWKITQSQGWPGHGFIQKLK 120
             TSDH+PI L      WGPTPF+F N  L H SF  +   WW+  Q  GW GH F++KL+
Sbjct: 720  WTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKESFGRWWREFQGNGWEGHKFMRKLQ 779

Query: 121  GLKKELKHWNHHTFGQQKKQRNRPGQGLYIFDNREEMDQLSEQDINRRAEIKAELITLSA 180
             +K +LK WN  +FG+  K++      L  FD+ E+   LS + + +RA  K EL  L  
Sbjct: 780  FVKAKLKEWNKASFGELSKRKKDILSDLVNFDSLEQEGGLSHELLAQRALRKGELEELIL 839

Query: 181  NEEIMCR-----------------------NPLPDIG-----DWMPISMEQRIDLEAPFT 240
             EEI  R                       +P  D       DW PIS E    LE+PFT
Sbjct: 840  REEIHWRQKARVKWESIKEEILRYFEKLYTSPSGDPWRVEGLDWSPISGESAFRLESPFT 899

Query: 241  EAEIYKAVQDLGTNKTPNPDSFTAAFFKKSWNILKED---------------NNENALLL 300
            E EI+K +  +  +K P PD FT A F+  W ++KED                + NA  +
Sbjct: 900  EEEIFKVIFQMDRDKAPGPDGFTIAVFQDCWEVIKEDLVKVFAEFHRSGIINQSTNASFI 959

Query: 301  MSL-RTFYDRVVPPGQPDRFLLSVHALV--VLLERLKKVLPYTITNFQSTFVENQRIMDA 341
            + L +    R +   +P   + S++ ++  VL  R++ VL  TI + Q  FV+ ++I+DA
Sbjct: 960  VLLPKKNMSRRISDFRPISLITSLYKIIAKVLAGRIRGVLHETIHSTQGAFVQGRQILDA 1019

[Close]

BLAST of Lag0006757 vs. ExPASy TrEMBL
Match: A0A438JRF4 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_109 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-51
Identity = 134/390 (34.36%), Postives = 191/390 (48.97%), Query Frame = 0


Query: 1    MRKFNKFIELAALQDIPLSNGKYTWSNFHPNPTMTLIDRFLLSDNIPIKFGSAKVRRLER 60
            MR F++FI  + L D PL N  +TWSN   +P    +DRFL S      F  +    L R
Sbjct: 900  MRCFDEFIRESGLLDPPLRNAAFTWSNMQADPICKRLDRFLFSSEWDTFFSQSFQEALPR 959

Query: 61   VTSDHYPICLTLGKEHWGPTPFQFINARLSHHSFLHTVEAWWKITQSQGWPGHGFIQKLK 120
             TSDH PICL      WGPTPF+F N  L H  F      WW     +GW GH F++KLK
Sbjct: 960  WTSDHNPICLETNPLKWGPTPFRFENMWLLHPEFKEKFRVWWLECTGEGWEGHKFMRKLK 1019

Query: 121  GLKKELKHWNHHTFGQQKKQRNRPGQGLYIFDNREEMDQLSEQDINRRAEIKAELITLSA 180
             +K +LK WN  TFG  K+++      L   D  E+   L+   +  R   + EL  +  
Sbjct: 1020 FVKSKLKEWNIMTFGDLKERKKLILTDLSRIDLIEQEGNLNSDLVLERTLKRRELEDVLL 1079

Query: 181  NEEIMCRNPLP-------------------------DIGDWMPISMEQRIDLEAPFTEAE 240
             EE+  R                             +  DW+PIS E  + L+ PFTE E
Sbjct: 1080 KEEVQWRQKSKVKWIKEGDCNSKFFHRVATGESWRVEGIDWVPISDESGVWLDRPFTEEE 1139

Query: 241  IYKAVQDLGTNKTPNPDSFTAAFFKKSWNILKED-------NNENALLLMSLRTFYDRVV 300
            + +AV  L   K P PD FT A +++ W+++KED        + N ++  S    +  +V
Sbjct: 1140 VRRAVFQLNKEKAPGPDGFTIAVYQECWDVIKEDLMRVFLEFHTNGVINQSTNATFIALV 1199

Query: 301  PPG---------QPDRFLLSVHALV--VLLERLKKVLPYTITNFQSTFVENQRIMDASSI 347
            P           +P   + S++ ++  VL  RL+KVL  TI++ Q  FVE + I+DA  I
Sbjct: 1200 PKKSQSVKISDYRPISLVTSLYKIIAKVLSGRLRKVLHETISDSQGAFVEGRHILDAVLI 1259

[Close]

BLAST of Lag0006757 vs. ExPASy TrEMBL
Match: A0A438JQQ0 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_64 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.0e-51
Identity = 137/400 (34.25%), Postives = 190/400 (47.50%), Query Frame = 0


Query: 1   MRKFNKFIELAALQDIPLSNGKYTWSNFHPNPTMTLIDRFLLSDNIPIKFGSAKVRRLER 60
           M+ F++FI    L D PL +  YTWSN   NP    +DRFL S+     F  +    L R
Sbjct: 217 MKDFDEFIRDCELIDSPLRSASYTWSNMQENPVCKRLDRFLYSNEWEQVFPQSLQGVLPR 276

Query: 61  VTSDHYPICLTLGKEHWGPTPFQFINARLSHHSFLHTVEAWWKITQSQGWPGHGFIQKLK 120
            TSDH+PI L      WGPTPF+F N  L H SF      WW   Q  GW GH F++KL+
Sbjct: 277 WTSDHWPIVLETNPFKWGPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMRKLQ 336

Query: 121 GLKKELKHWNHHTFGQQKKQRNRPGQGLYIFDNREEMDQLSEQDINRRAEIKAELITLSA 180
            +K +LK WN  +FG+  K++      L  FD+ E+   LS + + +RA  K EL  L  
Sbjct: 337 FVKAKLKEWNKTSFGELSKKKKDILAVLANFDSLEQEGGLSHELLVQRALSKGELEELIL 396

Query: 181 NEEIMCRNPLPDI------------------------------------------GDWMP 240
            EEI  R  L                                              DW P
Sbjct: 397 REEIHWRQKLGKFIKELENESGLMLNNPESIKEEILRYFEKLYASSSGESWRVEGLDWSP 456

Query: 241 ISMEQRIDLEAPFTEAEIYKAVQDLGTNKTPNPDSFTAAFFKKSWNILKED--------- 300
           I  E    LE PFTE EIYKA+  +  +K P PD FT A F+  W+++KED         
Sbjct: 457 IDGESASRLEFPFTEEEIYKAIFQMDRDKAPGPDGFTIAVFQDCWDVIKEDLVRVFAEFH 516

Query: 301 ------NNENALLLMSL-RTFYDRVVPPGQPDRFLLSVHALV--VLLERLKKVLPYTITN 341
                  + NA  ++ L +    R +   +P   + S++ ++  VL  RL+ VL  TI +
Sbjct: 517 RSGIINQSTNASFIVLLPKKSMSRRISDFRPISLITSLYKIIAKVLAGRLRGVLHETIHS 576

[Close]

BLAST of Lag0006757 vs. ExPASy TrEMBL
Match: A5BA26 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_032700 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.7e-50
Identity = 131/400 (32.75%), Postives = 192/400 (48.00%), Query Frame = 0


Query: 1   MRKFNKFIELAALQDIPLSNGKYTWSNFHPNPTMTLIDRFLLSDNIPIKFGSAKVRRLER 60
           MR F+ FI    L D PL N  +TWSN   +P    +DRFL S+   + F       L R
Sbjct: 10  MRDFDSFIRECELLDPPLRNASFTWSNMQESPVCKRLDRFLYSNEWGLLFPQGLQEALIR 69

Query: 61  VTSDHYPICLTLGKEHWGPTPFQFINARLSHHSFLHTVEAWWKITQSQGWPGHGFIQKLK 120
            TSDH+PI +      WGPTPF+F N  L+H  F      WW   Q  GW GH F+++L+
Sbjct: 70  RTSDHWPIVMDTNPFMWGPTPFRFENMWLNHTKFKENFRDWWSGFQGNGWEGHKFMRRLQ 129

Query: 121 GLKKELKHWNHHTFGQQKKQRNRPGQGLYIFDNREEMDQLSEQDINRRAEIKAELITLSA 180
            +K +LK WN  +FG+ K+++      L  FD  E+   L+   +++RA  K EL  L  
Sbjct: 130 YVKAKLKEWNKFSFGELKEKKKSILNDLANFDAIEQEGGLNPDLLSQRASRKGELEELIL 189

Query: 181 NEEIMCRNPL-----------------------------------------PDIGDWMPI 240
            EEI  R                                             +  DW PI
Sbjct: 190 REEIHWRQKAKVKWVKEGXCNSKFYHKVANGRRNRKYIKELENERGLVLKNAERLDWSPI 249

Query: 241 SMEQRIDLEAPFTEAEIYKAVQDLGTNKTPNPDSFTAAFFKKSWNILKED---------- 300
           S E  + L++PFTE EI KA+  L  +K P PD FT A F++ W+++KED          
Sbjct: 250 SEESALRLDSPFTEEEISKAIFQLDRDKAPGPDGFTIAVFQECWDVIKEDLVRVFAEFHR 309

Query: 301 -------NNENALLLMSLRTFYDRVVPPGQPDRFLLSVHALV--VLLERLKKVLPYTITN 341
                   N + ++L+  ++   R +   +P   + S++ ++  VL  RL+ VL  TI  
Sbjct: 310 SGVINQSTNASFIVLIPKKSLSKR-ISDFRPISLITSLYKIIAKVLSGRLRGVLHQTIHY 369

[Close]

BLAST of Lag0006757 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 42.7 bits (99), Expect = 6.8e-04
Identity = 25/73 (34.25%), Postives = 39/73 (53.42%), Query Frame = 0


Query: 178 LSANEEIMCRNPLPDIGDWMPISMEQRI--DLEAPFTEAEIYKAVQDLGTNKTPNPDSFT 237
           L ++ +I+  + +  I D  P      +   L A  ++ EI  AV  +  NK P PDSFT
Sbjct: 496 LGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFT 555

Query: 238 AAFFKKSWNILKE 249
           A FF +SW ++K+
Sbjct: 556 AEFFWESWFVVKD 568

The following BLAST results are available for this feature:

BLAST of Lag0006757 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW53010.1	2.8e-52	36.86	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]
RVW96070.1	3.7e-52	34.72	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
RVX11537.1	2.4e-51	34.36	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]
RVX11275.1	4.1e-51	34.25	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]
RVW25035.1	3.5e-50	34.10	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]

BLAST of Lag0006757 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0006757 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438EZ36	1.4e-52	36.86	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF...	[more]
A0A438IH50	1.8e-52	34.72	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A438JRF4	1.2e-51	34.36	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF...	[more]
A0A438JQQ0	2.0e-51	34.25	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF...	[more]
A5BA26	1.7e-50	32.75	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]

BLAST of Lag0006757 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43760.1	6.8e-04	34.25	DNAse I-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 1..72 e-value: 4.7E-7 score: 31.8
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 1..72
None	No IPR available	PANTHER	PTHR33710:SF28	SUBFAMILY NOT NAMED	coord: 1..173
None	No IPR available	PANTHER	PTHR33710	BNAC02G09200D PROTEIN	coord: 1..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0006757.1	Lag0006757.1	mRNA