Lag0006695 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0006695
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	DUF4283 domain-containing protein
Location	chr6: 45003779 .. 45004585 (-)
RNA-Seq Expression	Lag0006695
Synteny	Lag0006695

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGACATGGTCGACATACCGACATTTCCATGTCGACGGAAATGTTGGTAAATTCCTAATCCATTTTTACCCATGGAGTGCTGAAGTCATGAATAGTAAGCCAAAGGTCCCCTTTTATGGAGGATGGATTAAAAAAAGAAACTTGCCTATTGATAAATGGTCCATGGACACCTTTATGAAAATAGGTGAAAAGTGTGGTGGATATCTGGAAACAGCCAACAAAACCCTAGCTCGTATGGATATGATGGAAATCAGTATCAAGGTCAAAGAAAACAGCTCTGGCTTCGTCCCAACAGAAATTCACCTACCATCGTCCTCCTCCTATCCCACGATCGTCAAGATAGATATGTTCTTCATGGAAGACTATAACATTGGATACATTGTCGGAATTCATGGCAAAATTCCTTCCACGGCGGAGAAAAGTGCCCCACGCGCCACAGAAGATAGAGCTCAGATCGAAGGTTGGGATGAGGGGAAATCACGCGCGGCCCATGAGAGGCTGGAAACCATAGAAGAAAGTCTGCAGAACTCGTATAAGGGGGAAACCCAAAAAGCCCCAATCGGTGATTTTCCCTTTGCCCCAGATGTGTTATCCGCAGGAACTTCAGAGAGGGACCCACTTCCTTCTGCTTTATCCAAGACACCCCAATCCCCAAAAGCCCAACCAGCTAAACACAGAGGGACCCACTCATCTAAAGCCACAGATAAAGTTGATCCCCTAAGCCCAATCCGGAAAAGCCCAACTTCTCCCAAATATCCTGCCCAACCGCCAATATCTGCGGAAGAGAGCCCAATACTATCCTGA

mRNA sequence

ATGTTGACATGGTCGACATACCGACATTTCCATGTCGACGGAAATGTTGGTAAATTCCTAATCCATTTTTACCCATGGAGTGCTGAAGTCATGAATAGTAAGCCAAAGGTCCCCTTTTATGGAGGATGGATTAAAAAAAGAAACTTGCCTATTGATAAATGGTCCATGGACACCTTTATGAAAATAGGTGAAAAGTGTGGTGGATATCTGGAAACAGCCAACAAAACCCTAGCTCGTATGGATATGATGGAAATCAGTATCAAGGTCAAAGAAAACAGCTCTGGCTTCGTCCCAACAGAAATTCACCTACCATCGTCCTCCTCCTATCCCACGATCGTCAAGATAGATATGTTCTTCATGGAAGACTATAACATTGGATACATTGTCGGAATTCATGGCAAAATTCCTTCCACGGCGGAGAAAAGTGCCCCACGCGCCACAGAAGATAGAGCTCAGATCGAAGGTTGGGATGAGGGGAAATCACGCGCGGCCCATGAGAGGCTGGAAACCATAGAAGAAAGTCTGCAGAACTCGTATAAGGGGGAAACCCAAAAAGCCCCAATCGGTGATTTTCCCTTTGCCCCAGATGTGTTATCCGCAGGAACTTCAGAGAGGGACCCACTTCCTTCTGCTTTATCCAAGACACCCCAATCCCCAAAAGCCCAACCAGCTAAACACAGAGGGACCCACTCATCTAAAGCCACAGATAAAGTTGATCCCCTAAGCCCAATCCGGAAAAGCCCAACTTCTCCCAAATATCCTGCCCAACCGCCAATATCTGCGGAAGAGAGCCCAATACTATCCTGA

Coding sequence (CDS)

ATGTTGACATGGTCGACATACCGACATTTCCATGTCGACGGAAATGTTGGTAAATTCCTAATCCATTTTTACCCATGGAGTGCTGAAGTCATGAATAGTAAGCCAAAGGTCCCCTTTTATGGAGGATGGATTAAAAAAAGAAACTTGCCTATTGATAAATGGTCCATGGACACCTTTATGAAAATAGGTGAAAAGTGTGGTGGATATCTGGAAACAGCCAACAAAACCCTAGCTCGTATGGATATGATGGAAATCAGTATCAAGGTCAAAGAAAACAGCTCTGGCTTCGTCCCAACAGAAATTCACCTACCATCGTCCTCCTCCTATCCCACGATCGTCAAGATAGATATGTTCTTCATGGAAGACTATAACATTGGATACATTGTCGGAATTCATGGCAAAATTCCTTCCACGGCGGAGAAAAGTGCCCCACGCGCCACAGAAGATAGAGCTCAGATCGAAGGTTGGGATGAGGGGAAATCACGCGCGGCCCATGAGAGGCTGGAAACCATAGAAGAAAGTCTGCAGAACTCGTATAAGGGGGAAACCCAAAAAGCCCCAATCGGTGATTTTCCCTTTGCCCCAGATGTGTTATCCGCAGGAACTTCAGAGAGGGACCCACTTCCTTCTGCTTTATCCAAGACACCCCAATCCCCAAAAGCCCAACCAGCTAAACACAGAGGGACCCACTCATCTAAAGCCACAGATAAAGTTGATCCCCTAAGCCCAATCCGGAAAAGCCCAACTTCTCCCAAATATCCTGCCCAACCGCCAATATCTGCGGAAGAGAGCCCAATACTATCCTGA

Protein sequence

MLTWSTYRHFHVDGNVGKFLIHFYPWSAEVMNSKPKVPFYGGWIKKRNLPIDKWSMDTFMKIGEKCGGYLETANKTLARMDMMEISIKVKENSSGFVPTEIHLPSSSSYPTIVKIDMFFMEDYNIGYIVGIHGKIPSTAEKSAPRATEDRAQIEGWDEGKSRAAHERLETIEESLQNSYKGETQKAPIGDFPFAPDVLSAGTSERDPLPSALSKTPQSPKAQPAKHRGTHSSKATDKVDPLSPIRKSPTSPKYPAQPPISAEESPILS

Homology

[Close]

BLAST of Lag0006695 vs. NCBI nr
Match: QWT43305.1 (kinesin-related protein KIN7C [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 121.7 bits (304), Expect = 9.6e-24
Identity = 58/98 (59.18%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 36  KVPFYGGWIKKRNLPIDKWSMDTFMKIGEKCGGYLETANKTLARMDMMEISIKVKENSSG 95
           +VP YG WIK RNL ID+WS DTF  IGE CGGY+ET+ KTLARMDMME S+KVK N +G
Sbjct: 239 QVPSYGSWIKIRNLLIDQWSYDTFKLIGELCGGYIETSKKTLARMDMMEASLKVKMNKNG 298

Query: 96  FVPTEIHLPSSSSYPTIVKIDMFFMEDYNIGYIVGIHG 134
           F+P  I L S+S++   V++D FF  D +IGYI  + G
Sbjct: 299 FLPAIIQLLSTSAFSMAVQMDPFFDLDLHIGYIAAVMG 336

[Close]

BLAST of Lag0006695 vs. NCBI nr
Match: KAA0039967.1 (hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 6.7e-17
Identity = 46/126 (36.51%), Postives = 72/126 (57.14%), Query Frame = 0


Query: 16  VGKFLIHFYPWSAEVMNSKPKVPFYGGWIKKRNLPIDKWSMDTFMKIGEKCGGYLETANK 75
           VG+F + F  WS +   S   +P YGGWIK R +P+  W++++F++IG+ CGG++E A +
Sbjct: 245 VGRFYVKFEEWSQKTHASPKVIPSYGGWIKVRGVPLHAWNLESFIQIGDACGGFVEVAKE 304

Query: 76  TLARMDMMEISIKVKENSSGFVPTEIHLPSSSSYPTIVKIDMFFMEDYNIGYIVGIHGKI 135
           T    D+ E SIK+K+N SGF+P  I L     +  IV++ +     ++      IHG  
Sbjct: 305 TRELTDIFEASIKIKDNYSGFIPAYIKLFDKEEHSFIVQVIVKTEGKWHRERSPSIHGTF 364

Query: 136 PSTAEK 142
              A K
Sbjct: 365 TREAAK 370

[Close]

BLAST of Lag0006695 vs. NCBI nr
Match: TYK24535.1 (hypothetical protein E5676_scaffold266G00770 [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 6.7e-17
Identity = 46/126 (36.51%), Postives = 72/126 (57.14%), Query Frame = 0


Query: 16  VGKFLIHFYPWSAEVMNSKPKVPFYGGWIKKRNLPIDKWSMDTFMKIGEKCGGYLETANK 75
           VG+F + F  WS +   S   +P YGGWIK R +P+  W++++F++IG+ CGG++E A +
Sbjct: 245 VGRFYVKFEEWSQKTHASPKVIPSYGGWIKVRGVPLHAWNLESFIQIGDACGGFVEVAKE 304

Query: 76  TLARMDMMEISIKVKENSSGFVPTEIHLPSSSSYPTIVKIDMFFMEDYNIGYIVGIHGKI 135
           T    D+ E SIK+K+N SGF+P  I L     +  IV++ +     ++      IHG  
Sbjct: 305 TRELTDIFEASIKIKDNYSGFIPAYIKLFDKEEHSFIVQVIVKTEGKWHRERSPSIHGTF 364

Query: 136 PSTAEK 142
              A K
Sbjct: 365 TREAAK 370

[Close]

BLAST of Lag0006695 vs. NCBI nr
Match: ADN33672.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 97.8 bits (242), Expect = 1.5e-16
Identity = 45/126 (35.71%), Postives = 74/126 (58.73%), Query Frame = 0


Query: 16  VGKFLIHFYPWSAEVMNSKPKVPFYGGWIKKRNLPIDKWSMDTFMKIGEKCGGYLETANK 75
           VG+F + F  W+ +   S   VP YGGWIK R +P+  W++++F++IG+ CGG++E A +
Sbjct: 190 VGRFYVKFEEWNQKDHASPKFVPSYGGWIKVRAVPLHAWNLESFVQIGDACGGFMEVAKE 249

Query: 76  TLARMDMMEISIKVKENSSGFVPTEIHLPSSSSYPTIVKIDMFFMEDYNIGYIVGIHGKI 135
           T    D++E SI+VK+N SGF+P  I L        I+++ +     +++G    IHG  
Sbjct: 250 TRELTDLIEASIRVKDNYSGFIPAFIKLIDKEERSYIIQVIVKTEGKWHLGRNPSIHGTF 309

Query: 136 PSTAEK 142
              A +
Sbjct: 310 TREAAR 315

[Close]

BLAST of Lag0006695 vs. NCBI nr
Match: KAA0050054.1 (hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 97.8 bits (242), Expect = 1.5e-16
Identity = 43/126 (34.13%), Postives = 73/126 (57.94%), Query Frame = 0


Query: 16  VGKFLIHFYPWSAEVMNSKPKVPFYGGWIKKRNLPIDKWSMDTFMKIGEKCGGYLETANK 75
           VG+F + F  W+ +   S   +P YGGWIK R +P+  W++++F +IG+ CGG++E A +
Sbjct: 299 VGRFYVKFEEWNQKAHASPKVIPSYGGWIKVRGVPLHAWNLESFTQIGDACGGFIEVAKE 358

Query: 76  TLARMDMMEISIKVKENSSGFVPTEIHLPSSSSYPTIVKIDMFFMEDYNIGYIVGIHGKI 135
           T    D++E SI++K+N SGF+P  I L     +  I+++ +     +++     IHG  
Sbjct: 359 TRELTDIIEASIRIKDNYSGFIPAFIKLFDKEEHSFIIQVIVKTEGKWHLERSPSIHGTF 418

Query: 136 PSTAEK 142
              A K
Sbjct: 419 TREAAK 424

[Close]

BLAST of Lag0006695 vs. ExPASy TrEMBL
Match: A0A5D3DLP0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00770 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.2e-17
Identity = 46/126 (36.51%), Postives = 72/126 (57.14%), Query Frame = 0


Query: 16  VGKFLIHFYPWSAEVMNSKPKVPFYGGWIKKRNLPIDKWSMDTFMKIGEKCGGYLETANK 75
           VG+F + F  WS +   S   +P YGGWIK R +P+  W++++F++IG+ CGG++E A +
Sbjct: 245 VGRFYVKFEEWSQKTHASPKVIPSYGGWIKVRGVPLHAWNLESFIQIGDACGGFVEVAKE 304

Query: 76  TLARMDMMEISIKVKENSSGFVPTEIHLPSSSSYPTIVKIDMFFMEDYNIGYIVGIHGKI 135
           T    D+ E SIK+K+N SGF+P  I L     +  IV++ +     ++      IHG  
Sbjct: 305 TRELTDIFEASIKIKDNYSGFIPAYIKLFDKEEHSFIVQVIVKTEGKWHRERSPSIHGTF 364

Query: 136 PSTAEK 142
              A K
Sbjct: 365 TREAAK 370

[Close]

BLAST of Lag0006695 vs. ExPASy TrEMBL
Match: A0A5A7TEK8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002490 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.2e-17
Identity = 46/126 (36.51%), Postives = 72/126 (57.14%), Query Frame = 0


Query: 16  VGKFLIHFYPWSAEVMNSKPKVPFYGGWIKKRNLPIDKWSMDTFMKIGEKCGGYLETANK 75
           VG+F + F  WS +   S   +P YGGWIK R +P+  W++++F++IG+ CGG++E A +
Sbjct: 245 VGRFYVKFEEWSQKTHASPKVIPSYGGWIKVRGVPLHAWNLESFIQIGDACGGFVEVAKE 304

Query: 76  TLARMDMMEISIKVKENSSGFVPTEIHLPSSSSYPTIVKIDMFFMEDYNIGYIVGIHGKI 135
           T    D+ E SIK+K+N SGF+P  I L     +  IV++ +     ++      IHG  
Sbjct: 305 TRELTDIFEASIKIKDNYSGFIPAYIKLFDKEEHSFIVQVIVKTEGKWHRERSPSIHGTF 364

Query: 136 PSTAEK 142
              A K
Sbjct: 365 TREAAK 370

[Close]

BLAST of Lag0006695 vs. ExPASy TrEMBL
Match: A0A5A7TFK7 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00060 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.2e-17
Identity = 45/126 (35.71%), Postives = 72/126 (57.14%), Query Frame = 0


Query: 16  VGKFLIHFYPWSAEVMNSKPKVPFYGGWIKKRNLPIDKWSMDTFMKIGEKCGGYLETANK 75
           VG+F + F  WS +   S   +P YGGWIK R +P+  W++++F++IG+ CGG++E A +
Sbjct: 261 VGRFYVKFEEWSQKTHASPKVIPSYGGWIKVRGVPLHAWNLESFIQIGDACGGFVEVAKE 320

Query: 76  TLARMDMMEISIKVKENSSGFVPTEIHLPSSSSYPTIVKIDMFFMEDYNIGYIVGIHGKI 135
           T    D+ E SIK+K+N +GF+P  I L     +  IV++ +     ++      IHG  
Sbjct: 321 TRELTDIFEASIKIKDNYTGFIPAYIKLFDKEEHSFIVQVIVKTEGKWHRERSPSIHGTF 380

Query: 136 PSTAEK 142
              A K
Sbjct: 381 TREAAK 386

[Close]

BLAST of Lag0006695 vs. ExPASy TrEMBL
Match: A0A5A7U495 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00340 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.2e-17
Identity = 43/126 (34.13%), Postives = 73/126 (57.94%), Query Frame = 0


Query: 16  VGKFLIHFYPWSAEVMNSKPKVPFYGGWIKKRNLPIDKWSMDTFMKIGEKCGGYLETANK 75
           VG+F + F  W+ +   S   +P YGGWIK R +P+  W++++F +IG+ CGG++E A +
Sbjct: 299 VGRFYVKFEEWNQKAHASPKVIPSYGGWIKVRGVPLHAWNLESFTQIGDACGGFIEVAKE 358

Query: 76  TLARMDMMEISIKVKENSSGFVPTEIHLPSSSSYPTIVKIDMFFMEDYNIGYIVGIHGKI 135
           T    D++E SI++K+N SGF+P  I L     +  I+++ +     +++     IHG  
Sbjct: 359 TRELTDIIEASIRIKDNYSGFIPAFIKLFDKEEHSFIIQVIVKTEGKWHLERSPSIHGTF 418

Query: 136 PSTAEK 142
              A K
Sbjct: 419 TREAAK 424

[Close]

BLAST of Lag0006695 vs. ExPASy TrEMBL
Match: A0A5D3CFS8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00330 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.2e-17
Identity = 43/126 (34.13%), Postives = 73/126 (57.94%), Query Frame = 0


Query: 16  VGKFLIHFYPWSAEVMNSKPKVPFYGGWIKKRNLPIDKWSMDTFMKIGEKCGGYLETANK 75
           VG+F + F  W+ +   S   +P YGGWIK R +P+  W++++F +IG+ CGG++E A +
Sbjct: 351 VGRFYVKFEEWNQKAHASPKVIPSYGGWIKVRGVPLHAWNLESFTQIGDACGGFIEVAKE 410

Query: 76  TLARMDMMEISIKVKENSSGFVPTEIHLPSSSSYPTIVKIDMFFMEDYNIGYIVGIHGKI 135
           T    D++E SI++K+N SGF+P  I L     +  I+++ +     +++     IHG  
Sbjct: 411 TRELTDIIEASIRIKDNYSGFIPAFIKLFDKEEHSFIIQVIVKTEGKWHLERSPSIHGTF 470

Query: 136 PSTAEK 142
              A K
Sbjct: 471 TREAAK 476

The following BLAST results are available for this feature:

BLAST of Lag0006695 vs. NCBI nr


Match Name	E-value	Identity	Description
QWT43305.1	9.6e-24	59.18	kinesin-related protein KIN7C [Citrullus lanatus subsp. vulgaris]	[more]
KAA0039967.1	6.7e-17	36.51	hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa]	[more]
TYK24535.1	6.7e-17	36.51	hypothetical protein E5676_scaffold266G00770 [Cucumis melo var. makuwa]	[more]
ADN33672.1	1.5e-16	35.71	hypothetical protein [Cucumis melo subsp. melo]	[more]
KAA0050054.1	1.5e-16	34.13	hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa]	[more]

BLAST of Lag0006695 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0006695 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DLP0	3.2e-17	36.51	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TEK8	3.2e-17	36.51	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7TFK7	7.2e-17	35.71	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7U495	7.2e-17	34.13	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3CFS8	7.2e-17	34.13	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Lag0006695 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 16..89 e-value: 8.2E-9 score: 35.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0006695.1	Lag0006695.1	mRNA