Lag0006621 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0006621
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	RING-type domain-containing protein
Location	chr6: 44240807 .. 44244321 (-)
RNA-Seq Expression	Lag0006621
Synteny	Lag0006621

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGAAAGGGCCATGGAATTGCAGAGCACTGCACCAATGGAGATGGAGACGAGCAGTTCCTCTTACGATGATACGAACCCATGTCCGATCTGTCTCGGACCTATAATTCAACCTTCCTACCTCGACAAATGCTTCCGTACGTCTCCCTCTCTCTCAATCTGATCATTCTTTTTGTTTTTCTTGAATTTTCTGGGCATCAAACAGATAACTAATTAGGAATATTGTTCATCTTTACGAATTAGGGTTTTTTCCCCCACAATCATATAGTTATGTAGTTGGAATTGGAAATGATCCTTTACGTGTCACTGATATCATCGAAAGAACCACTCTGTTACCTTTTTAGGGGATTTCAGTTCCTAGCACTTCCTCAATTTTATAAGGTTTCTGCCACTGTTCTTCATTGTTTGATCATTGCAGTATGTTGCAAGAAAGAATTAACTGGTTTTATTTGGGATAAAGATACACTAGCTAATTCTTTAGCTTTGAGTAGACTTAAAATTATTTTAGAAATACTCAATTTGATCTGATTCTCAATTCTTTAGCGCTGTTGTACGCTTGAGGCAAGCTATTTACAGTGTATCATGACATCTTCTTCAAGGAGAACAGAAACAGCAGCGAGATTGCTTTGATAGATTCTGTTTACCGTCTGTTACTTTCTTATATGTAGGCTTGAATAATAATTTTAATTGGATTATTGAAATGAAAGAGGAAATATCACATAAGTTTAGATTTTTAATATGATATCATGTTAATCATCTGTGATTTCAACAGTTTAAGCCTTAAAGTTTGGGTGAATTTGATCATTTCATTAATTCTAAAAAAATTATTCTTCCATTCATGTTAAGTACAATTTACTATATAAAAAGGGAACGTGGACACAATTTGTTGAGGAGTTTCAATGCTTTTTATTCTATGTCTCGTCTTGCAGATAAATTTTGTTACAATTGCATTGTTCAATGGACCAAAGTGGTTTCTGGAAAGCGCTCGTGTACACTTTCGTCCATTAAGTGTCCTTTATGCAAGGTTCTATTTTCAATCTTGTTTTATTTTAGCATTCCTTACTTTTTGTATTGCATTTCTTATTTTTTACATTTAATCACCAGACGGAAAGTTCTTCTATAATACATGGATTAGATGGACATTGTTTCCAAAGACATTATGTTAATCGAGATTTTCAGGATAGGTATCTTCTTGTTGATACTTCCCCAAGGTTTTCTGTTCTTATTTTCTCTGCCTTAATGGACTATGCTTTAATCTTTATGATTGATGTTATTTGCAGCTTTATCTTATCGAAAGCTCACAAGTATAGATTACAGTGCTATTATACTGAACCAGGTACGTTTTTGGCTTATCGCTCAACTCATTACGTGGATGTTTGATGCTCCAATATTTACACCATGGTTACTCCTTATCAATCTCCGTAATTGTCTACATGTAGGTTTCTTGGATGACATATTCAATGTTCAGAGATACTGGAAGTTACGGAAGTATCTCCAGGCAAACCAGTGGCTTGAAATTTGGTTGAAAAGGGAACTTCAAGCTCTGATTCAGGTTCCTGACTTAGTTTATTACATTGCATTTATACTTCTCTGGGATACTGCTTCCTTCCTTCTTCGTCTCGGAGAATGTTTAACACCTACTATCAAACAACATTCTCAAGACCTAAGAGGTGGGTGGGAAAGGGAGAAAACTCTCCATTCTTCATTCCCAGGTTCTCCTATGGTCGGATTCTCAGGGACCACAAGAATTCTATCACTTCACTGCACCTCGTAGTTAATAAAATTCTTAATTCCAAAATCCCCTCAGTATCAAAAAACGAAAATAAAGAAGGAGAGGGATGTGGTTTCTCTCATTTATAAAAACCAAATCATATTTCATGAAAGTTTAAATTTAGAGTTTCTTTTATATATTAAAAAAAATCAGGGCAGGGACGAAGAATGGGGTAGGGATAGAGATGGGGAATGTCATCCCTGTTTAGCTAATGGGAAAAATTTTGTCCTTGCTCCCTCTCCCCACCTAAATTGCGATTCCTGTCCTGTCAGAGGTGAGTCCCTATGGAGAAAAAGAAAATCCCTATTTCATCACCTTGGAGGAGGGTTTATCTATTGATTGAGGTTTTAAGAACTCTGTTTTATTTCAGTAGTTTAGAAGAAGTGGTTATAGGAAGTAGGCAAGATGAGGTAAAGATGTGTCTGTAGTGTTCCCTTCGCTTTAACTGTGGGGATAGTGCATTGGTCGTTCACACCATTTATAGTAGAGAAGGCATTACTGAAGACAAAACAGGATAGCAGTTGTGTATGATATCGTCTATGGCATACTTTCTTGATTTATCCATTCTATTTCTATGTATTACAGTTCCTTGCGCATGATGACTGATAGTGTCTCTTACCCTTGTACAGGAAGAAGATGTTGACATAATTATGCACCACCTACTTGGTTTAATTAGTTCATTTTTTAGTAGGTAACAGCCATCTGTTATTGCATTCTTAACTTTTATCAAATGAAAATTTTGGTCACCATACACCTAACAGGGTCACTCCACCACATTACTCCTGTCCCCATATATCTATCGTTAAATGTCTTCTTTTCTTCTTTTCTTTTTAAGGCACTGTTTGATAACAATTTGGTTTTTGAAAATTAAGCTTATAAACACTATTCTCACCTCCATAATGGCCACCTGCCTAGGATTTAATATCCTATGTGTTTTCTTGACAATCAAATGTAGGGTCAAACGGTTGTCCCGTCAGATTAGTCGAGGTGTGTGGAAGCTGGCTTGGACATCACGAAAATTAAAAATAAATAAATAATAACTCCCATCTTGTCCTCATGTTGCACGCCTTTAACACTACTCCCACCTTATGAAATTTTTTGTTTTGTTATCTATTTTTCACAAGGTTTTCAAAATCCAAGTCTAAGTTTCAAAAAGTAAAAAAAAAAATAGTTTTTAAAAACTTGTTTTTTTTTTTTTGAATTTGACTAAGAATTCAAAATTTTATTTTAGAAAGATGAAAACCATTGTAAAGAAAGTGTGAGAAAACAAACATAATTTTCAAAAATAAAAAACCAAAAGATTATCAAACTAGCTCAAAGCTTTTCATTTTGGGATCCATTAAAAACGCCCATTTTCATTCATCTCTATGACACTACCCACATGAATGTATATGTGCATGATACCTGATTACACTCTGAAACCTGCTTCTTCTTTGTTTTTCTGAAGAAATGAACCTAGGTATCAAACAGAAACTCCTGAACTGAAGCGGGAAAGGTTCAGCAGCATGGTTTGTGATGCAGCAAGGCCATTCCTGTCAGCACGAGCAGACCGGTTCGTGCACGAGTTGGAGCTGTTTCTTGCTTCAGGTTTGAACATCGAAGCCTACGATTCGGTTTACTTGCAACGGTTGGGTTGGAGTGAGCCTGTAATGCCCAATGTGACTATCAACGAAGATCTTGGACTCAAACCTGTAACCCCATACTTGTATATCTTTGATTATGATCCTGAAGATGGTGATTGA

mRNA sequence

ATGTCGGAAAGGGCCATGGAATTGCAGAGCACTGCACCAATGGAGATGGAGACGAGCAGTTCCTCTTACGATGATACGAACCCATGTCCGATCTGTCTCGGACCTATAATTCAACCTTCCTACCTCGACAAATGCTTCCATAAATTTTGTTACAATTGCATTGTTCAATGGACCAAAGTGGTTTCTGGAAAGCGCTCGTGTACACTTTCGTCCATTAAGTGTCCTTTATGCAAGACGGAAAGTTCTTCTATAATACATGGATTAGATGGACATTGTTTCCAAAGACATTATGTTAATCGAGATTTTCAGGATAGCTTTATCTTATCGAAAGCTCACAAGTATAGATTACAGTGCTATTATACTGAACCAGGTTTCTTGGATGACATATTCAATGTTCAGAGATACTGGAAGTTACGGAAGTATCTCCAGGCAAACCAGTGGCTTGAAATTTGGTTGAAAAGGGAACTTCAAGCTCTGATTCAGGAAGAAGATGTTGACATAATTATGCACCACCTACTTGGTTTAATTAGTTCATTTTTTAGTAGAAATGAACCTAGGTATCAAACAGAAACTCCTGAACTGAAGCGGGAAAGGTTCAGCAGCATGGTTTGTGATGCAGCAAGGCCATTCCTGTCAGCACGAGCAGACCGGTTCGTGCACGAGTTGGAGCTGTTTCTTGCTTCAGGTTTGAACATCGAAGCCTACGATTCGGTTTACTTGCAACGGTTGGGTTGGAGTGAGCCTGTAATGCCCAATGTGACTATCAACGAAGATCTTGGACTCAAACCTGTAACCCCATACTTGTATATCTTTGATTATGATCCTGAAGATGGTGATTGA

Coding sequence (CDS)

ATGTCGGAAAGGGCCATGGAATTGCAGAGCACTGCACCAATGGAGATGGAGACGAGCAGTTCCTCTTACGATGATACGAACCCATGTCCGATCTGTCTCGGACCTATAATTCAACCTTCCTACCTCGACAAATGCTTCCATAAATTTTGTTACAATTGCATTGTTCAATGGACCAAAGTGGTTTCTGGAAAGCGCTCGTGTACACTTTCGTCCATTAAGTGTCCTTTATGCAAGACGGAAAGTTCTTCTATAATACATGGATTAGATGGACATTGTTTCCAAAGACATTATGTTAATCGAGATTTTCAGGATAGCTTTATCTTATCGAAAGCTCACAAGTATAGATTACAGTGCTATTATACTGAACCAGGTTTCTTGGATGACATATTCAATGTTCAGAGATACTGGAAGTTACGGAAGTATCTCCAGGCAAACCAGTGGCTTGAAATTTGGTTGAAAAGGGAACTTCAAGCTCTGATTCAGGAAGAAGATGTTGACATAATTATGCACCACCTACTTGGTTTAATTAGTTCATTTTTTAGTAGAAATGAACCTAGGTATCAAACAGAAACTCCTGAACTGAAGCGGGAAAGGTTCAGCAGCATGGTTTGTGATGCAGCAAGGCCATTCCTGTCAGCACGAGCAGACCGGTTCGTGCACGAGTTGGAGCTGTTTCTTGCTTCAGGTTTGAACATCGAAGCCTACGATTCGGTTTACTTGCAACGGTTGGGTTGGAGTGAGCCTGTAATGCCCAATGTGACTATCAACGAAGATCTTGGACTCAAACCTGTAACCCCATACTTGTATATCTTTGATTATGATCCTGAAGATGGTGATTGA

Protein sequence

MSERAMELQSTAPMEMETSSSSYDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKRSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYYTEPGFLDDIFNVQRYWKLRKYLQANQWLEIWLKRELQALIQEEDVDIIMHHLLGLISSFFSRNEPRYQTETPELKRERFSSMVCDAARPFLSARADRFVHELELFLASGLNIEAYDSVYLQRLGWSEPVMPNVTINEDLGLKPVTPYLYIFDYDPEDGD

Homology

[Close]

BLAST of Lag0006621 vs. NCBI nr
Match: XP_022150768.1 (uncharacterized protein LOC111018833 [Momordica charantia])

HSP 1 Score: 534.3 bits (1375), Expect = 6.5e-148
Identity = 251/279 (89.96%), Postives = 268/279 (96.06%), Query Frame = 0


Query: 1   MSERAMELQSTAPMEMETSSSSYDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKV 60
           MSE AMELQSTA  EMET+SSSYDDTNPCPICLG II+PSYLDKCFHKFCYNCIVQWTKV
Sbjct: 1   MSESAMELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKV 60

Query: 61  VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYY 120
           VSGKRSC LS IKCPLCKTESSSIIHGLDGHCFQRHYVN+DFQDSFILSKAHKYRLQCYY
Sbjct: 61  VSGKRSCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLDDIFNVQRYWKLRKYLQANQWLEIWLKRELQALIQEEDVDIIMHHLLGLISSFF 180
           TEPGFL+DIFNVQRYWKLRKYLQANQWLE+WLKRELQALIQEEDVDIIMHHLLGLI+ FF
Sbjct: 121 TEPGFLEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180

Query: 181 SRNEPRYQTETPELKRERFSSMVCDAARPFLSARADRFVHELELFLASGLNIEAYDSVYL 240
           SRNE +YQTE+PE+K+E+FSS+V DAA+PFLSARADRFVHELELFLASGLNIEAYDSVYL
Sbjct: 181 SRNEQKYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWSEPVMPNVTINEDLGLKPVTPYLYIFDYDPEDGD 280
           QRLGWSEPV+P+V I EDLGLKPVTPYLYIFDYDP+DG+
Sbjct: 241 QRLGWSEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE 279

[Close]

BLAST of Lag0006621 vs. NCBI nr
Match: XP_038889020.1 (uncharacterized protein LOC120078783 isoform X1 [Benincasa hispida])

HSP 1 Score: 525.4 bits (1352), Expect = 3.0e-145
Identity = 249/277 (89.89%), Postives = 261/277 (94.22%), Query Frame = 0


Query: 1   MSERAMELQSTAPMEMETSSSSYDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKV 60
           MSERAMELQSTAP+E  TSSS  DDTNPCPICLG IIQPSYLDKCFHKFCYNCI+QWTKV
Sbjct: 1   MSERAMELQSTAPVETATSSSFSDDTNPCPICLGLIIQPSYLDKCFHKFCYNCILQWTKV 60

Query: 61  VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYY 120
           VSGK SC LSSIKCPLCKTESSSIIHGLDGHC QRHYVNRDFQDSFILSKAHKYRLQCYY
Sbjct: 61  VSGKHSCMLSSIKCPLCKTESSSIIHGLDGHCLQRHYVNRDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLDDIFNVQRYWKLRKYLQANQWLEIWLKRELQALIQEEDVDIIMHHLLGLISSFF 180
           TEPGFLDDIFNVQRYWKLRKYLQANQWLE+WLKRELQALIQEED+DIIMHHLLG I+SFF
Sbjct: 121 TEPGFLDDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDIDIIMHHLLGFINSFF 180

Query: 181 SRNEPRYQTETPELKRERFSSMVCDAARPFLSARADRFVHELELFLASGLNIEAYDSVYL 240
           SRNEPRYQTETPELKRE F+ MV DAA+PFLSARADRFV ELELFLASGLNIEAYDSVYL
Sbjct: 181 SRNEPRYQTETPELKRETFNRMVLDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWSEPVMPNVTINEDLGLKPVTPYLYIFDYDPED 278
           QRLGW+EPV+P + I EDLGLKPVTPYLYIF+YDP+D
Sbjct: 241 QRLGWNEPVVPIMAIKEDLGLKPVTPYLYIFEYDPDD 277

[Close]

BLAST of Lag0006621 vs. NCBI nr
Match: XP_022946760.1 (uncharacterized protein LOC111450733 [Cucurbita moschata])

HSP 1 Score: 516.2 bits (1328), Expect = 1.8e-142
Identity = 243/274 (88.69%), Postives = 260/274 (94.89%), Query Frame = 0


Query: 6   MELQSTAPMEMETSSSSYDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKR 65
           MELQ TAP+EMETSSSS DDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGK 
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  SCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYYTEPGF 125
           SCTLSSIKCPLCKTES SIIHGLDGHCFQRHYVN+DFQDSFILSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LDDIFNVQRYWKLRKYLQANQWLEIWLKRELQALIQEEDVDIIMHHLLGLISSFFSRNEP 185
           LDDIF+VQ+YWKLRKYLQANQWLE+WLKRELQALIQEEDVDIIMHHLLG I SFFSRNEP
Sbjct: 121 LDDIFSVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEP 180

Query: 186 RYQTETPELKRERFSSMVCDAARPFLSARADRFVHELELFLASGLNIEAYDSVYLQRLGW 245
           RYQTETP+LKRERF+SM+ DAA+PFLS RADRFV ELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRERFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 SEPVMPNVTINEDLGLKPVTPYLYIFDYDPEDGD 280
           ++PV P++ + EDLG +PVTPYL+IFDYDP+DGD
Sbjct: 241 NKPVGPSMAV-EDLGHEPVTPYLFIFDYDPDDGD 273

[Close]

BLAST of Lag0006621 vs. NCBI nr
Match: XP_023545827.1 (uncharacterized protein LOC111805146 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 515.0 bits (1325), Expect = 4.1e-142
Identity = 242/274 (88.32%), Postives = 260/274 (94.89%), Query Frame = 0


Query: 6   MELQSTAPMEMETSSSSYDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKR 65
           MELQ TAP+EMETSSSS DDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGK 
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  SCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYYTEPGF 125
           SCTLSSIKCPLCKTES SIIHGLDGHCFQRHYVN+DFQDSFILSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LDDIFNVQRYWKLRKYLQANQWLEIWLKRELQALIQEEDVDIIMHHLLGLISSFFSRNEP 185
           LDDIF+VQ+YWKLRKYLQANQWLE+WLKRELQALIQEEDVDIIMHHLLG I SFFSRNEP
Sbjct: 121 LDDIFSVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEP 180

Query: 186 RYQTETPELKRERFSSMVCDAARPFLSARADRFVHELELFLASGLNIEAYDSVYLQRLGW 245
           RYQTETP+LKR+RF+SM+ DAA+PFLS RADRFV ELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRDRFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 SEPVMPNVTINEDLGLKPVTPYLYIFDYDPEDGD 280
           ++PV P++ + EDLG +PVTPYL+IFDYDP+DGD
Sbjct: 241 NKPVGPSMAV-EDLGHEPVTPYLFIFDYDPDDGD 273

[Close]

BLAST of Lag0006621 vs. NCBI nr
Match: XP_022999126.1 (uncharacterized protein LOC111493604 [Cucurbita maxima])

HSP 1 Score: 514.2 bits (1323), Expect = 6.9e-142
Identity = 242/274 (88.32%), Postives = 259/274 (94.53%), Query Frame = 0


Query: 6   MELQSTAPMEMETSSSSYDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKR 65
           MELQ TAP+EMETSSSS DDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGK 
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  SCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYYTEPGF 125
           SCTLSSIKCPLCKTES SIIHGLDGHCFQRHYVN+DFQDSFILSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LDDIFNVQRYWKLRKYLQANQWLEIWLKRELQALIQEEDVDIIMHHLLGLISSFFSRNEP 185
           LDDIFNVQ+YWKLRKYLQANQWLE+WLKRELQALIQEEDVDIIMHHLLG I SFFSRNE 
Sbjct: 121 LDDIFNVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEH 180

Query: 186 RYQTETPELKRERFSSMVCDAARPFLSARADRFVHELELFLASGLNIEAYDSVYLQRLGW 245
           RYQTETP+LKR+RF+SM+ DAA+PFLS RADRFV ELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRDRFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 SEPVMPNVTINEDLGLKPVTPYLYIFDYDPEDGD 280
           ++P  P++ + EDLGL+PVTPYL+IFDYDP+DGD
Sbjct: 241 NKPFGPSMAV-EDLGLEPVTPYLFIFDYDPDDGD 273

[Close]

BLAST of Lag0006621 vs. ExPASy Swiss-Prot
Match: Q80Z37 (E3 ubiquitin-protein ligase Topors OS=Mus musculus OX=10090 GN=Topors PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.0e-10
Identity = 37/116 (31.90%), Postives = 53/116 (45.69%), Query Frame = 0


Query: 7   ELQSTAPMEMETSSSSYDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKRS 66
           +LQ T P +    S        CPICL      SYLD+C HKFC+ C+ +W+K       
Sbjct: 89  KLQQTVPADASPDSK-------CPICLDRFDNVSYLDRCLHKFCFRCVQEWSK------- 148

Query: 67  CTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNR-DFQDSFILSKAHKYRLQCYYT 122
              +  +CPLCK    SI H +      + YV R  +  SF   +  ++R +   T
Sbjct: 149 ---NKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFTNPEVRRFRYRTTMT 187

[Close]

BLAST of Lag0006621 vs. ExPASy Swiss-Prot
Match: Q9NS56 (E3 ubiquitin-protein ligase Topors OS=Homo sapiens OX=9606 GN=TOPORS PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 8.5e-10
Identity = 35/115 (30.43%), Postives = 52/115 (45.22%), Query Frame = 0


Query: 7   ELQSTAPMEMETSSSSYDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKRS 66
           +LQ T P +    S        CPICL      SYLD+C HKFC+ C+ +W+K       
Sbjct: 88  KLQQTVPADASPDSK-------CPICLDRFDNVSYLDRCLHKFCFRCVQEWSK------- 147

Query: 67  CTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYYT 122
              +  +CPLCK    SI H +      + YV R   +   ++   ++R +   T
Sbjct: 148 ---NKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFVTPDRRFRYRTTLT 185

[Close]

BLAST of Lag0006621 vs. ExPASy Swiss-Prot
Match: P29129 (E3 ubiquitin-protein ligase ICP0 OS=Suid herpesvirus 1 (strain Indiana-Funkhauser / Becker) OX=31523 GN=EP0 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.3e-05
Identity = 24/61 (39.34%), Postives = 31/61 (50.82%), Query Frame = 0


Query: 29 CPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKRSCTLSSIKCPLCKTESSSIIHGL 88
          CPICL      +    C HKFC +CI +W          TL+S  CPLC    +SI+H +
Sbjct: 46 CPICLDVAATEAQTLPCMHKFCLDCIQRW----------TLTSTACPLCNARVTSILHHV 96

Query: 89 D 90
          D
Sbjct: 106 D 96

[Close]

BLAST of Lag0006621 vs. ExPASy Swiss-Prot
Match: Q9E1W2 (E3 ubiquitin-protein ligase IE61 OS=Cercopithecine herpesvirus 9 (strain DHV) OX=36348 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.8e-05
Identity = 27/85 (31.76%), Postives = 36/85 (42.35%), Query Frame = 0


Query: 13 PMEMETSSSSYDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKRSCTLSSI 72
          P    ++S S   T  C IC+  I        C H FC+ CI  WT           +S 
Sbjct: 3  PPAYTSTSGSVASTGNCAICMSAISGLGKTLPCLHDFCFVCIQTWTS----------TSA 62

Query: 73 KCPLCKTESSSIIHGLDGHCFQRHY 98
          +CPLC+T  SSI+H +        Y
Sbjct: 63 QCPLCRTVVSSILHNITSDANYEEY 77

[Close]

BLAST of Lag0006621 vs. ExPASy TrEMBL
Match: A0A6J1DAB4 (uncharacterized protein LOC111018833 OS=Momordica charantia OX=3673 GN=LOC111018833 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.1e-148
Identity = 251/279 (89.96%), Postives = 268/279 (96.06%), Query Frame = 0


Query: 1   MSERAMELQSTAPMEMETSSSSYDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKV 60
           MSE AMELQSTA  EMET+SSSYDDTNPCPICLG II+PSYLDKCFHKFCYNCIVQWTKV
Sbjct: 1   MSESAMELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKV 60

Query: 61  VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYY 120
           VSGKRSC LS IKCPLCKTESSSIIHGLDGHCFQRHYVN+DFQDSFILSKAHKYRLQCYY
Sbjct: 61  VSGKRSCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLDDIFNVQRYWKLRKYLQANQWLEIWLKRELQALIQEEDVDIIMHHLLGLISSFF 180
           TEPGFL+DIFNVQRYWKLRKYLQANQWLE+WLKRELQALIQEEDVDIIMHHLLGLI+ FF
Sbjct: 121 TEPGFLEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180

Query: 181 SRNEPRYQTETPELKRERFSSMVCDAARPFLSARADRFVHELELFLASGLNIEAYDSVYL 240
           SRNE +YQTE+PE+K+E+FSS+V DAA+PFLSARADRFVHELELFLASGLNIEAYDSVYL
Sbjct: 181 SRNEQKYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWSEPVMPNVTINEDLGLKPVTPYLYIFDYDPEDGD 280
           QRLGWSEPV+P+V I EDLGLKPVTPYLYIFDYDP+DG+
Sbjct: 241 QRLGWSEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE 279

[Close]

BLAST of Lag0006621 vs. ExPASy TrEMBL
Match: A0A6J1G4Z2 (uncharacterized protein LOC111450733 OS=Cucurbita moschata OX=3662 GN=LOC111450733 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 8.8e-143
Identity = 243/274 (88.69%), Postives = 260/274 (94.89%), Query Frame = 0


Query: 6   MELQSTAPMEMETSSSSYDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKR 65
           MELQ TAP+EMETSSSS DDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGK 
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  SCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYYTEPGF 125
           SCTLSSIKCPLCKTES SIIHGLDGHCFQRHYVN+DFQDSFILSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LDDIFNVQRYWKLRKYLQANQWLEIWLKRELQALIQEEDVDIIMHHLLGLISSFFSRNEP 185
           LDDIF+VQ+YWKLRKYLQANQWLE+WLKRELQALIQEEDVDIIMHHLLG I SFFSRNEP
Sbjct: 121 LDDIFSVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEP 180

Query: 186 RYQTETPELKRERFSSMVCDAARPFLSARADRFVHELELFLASGLNIEAYDSVYLQRLGW 245
           RYQTETP+LKRERF+SM+ DAA+PFLS RADRFV ELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRERFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 SEPVMPNVTINEDLGLKPVTPYLYIFDYDPEDGD 280
           ++PV P++ + EDLG +PVTPYL+IFDYDP+DGD
Sbjct: 241 NKPVGPSMAV-EDLGHEPVTPYLFIFDYDPDDGD 273

[Close]

BLAST of Lag0006621 vs. ExPASy TrEMBL
Match: A0A6J1KC78 (uncharacterized protein LOC111493604 OS=Cucurbita maxima OX=3661 GN=LOC111493604 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 3.3e-142
Identity = 242/274 (88.32%), Postives = 259/274 (94.53%), Query Frame = 0


Query: 6   MELQSTAPMEMETSSSSYDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKR 65
           MELQ TAP+EMETSSSS DDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGK 
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  SCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYYTEPGF 125
           SCTLSSIKCPLCKTES SIIHGLDGHCFQRHYVN+DFQDSFILSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LDDIFNVQRYWKLRKYLQANQWLEIWLKRELQALIQEEDVDIIMHHLLGLISSFFSRNEP 185
           LDDIFNVQ+YWKLRKYLQANQWLE+WLKRELQALIQEEDVDIIMHHLLG I SFFSRNE 
Sbjct: 121 LDDIFNVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEH 180

Query: 186 RYQTETPELKRERFSSMVCDAARPFLSARADRFVHELELFLASGLNIEAYDSVYLQRLGW 245
           RYQTETP+LKR+RF+SM+ DAA+PFLS RADRFV ELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRDRFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 SEPVMPNVTINEDLGLKPVTPYLYIFDYDPEDGD 280
           ++P  P++ + EDLGL+PVTPYL+IFDYDP+DGD
Sbjct: 241 NKPFGPSMAV-EDLGLEPVTPYLFIFDYDPDDGD 273

[Close]

BLAST of Lag0006621 vs. ExPASy TrEMBL
Match: A0A0A0LLN5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021620 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 2.2e-138
Identity = 237/279 (84.95%), Postives = 257/279 (92.11%), Query Frame = 0


Query: 1   MSERAMELQSTAPMEMETSSSSYDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKV 60
           MS ++MELQSTA MEMET +S+ D TNPCPICLGPI Q SYLDKCFH FCYNCIVQWTKV
Sbjct: 1   MSGKSMELQSTASMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV 60

Query: 61  VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYY 120
           VSGKRSCTLSSIKCPLCKTESSSIIHGLDGH FQRHYVN DFQDSFILSKAH+YRLQCYY
Sbjct: 61  VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYY 120

Query: 121 TEPGFLDDIFNVQRYWKLRKYLQANQWLEIWLKRELQALIQEEDVDIIMHHLLGLISSFF 180
           TEPGFL+DIF+VQRYWKL+KYLQANQWLE+WLKRELQALIQEEDVDIIMHH LGLI+SFF
Sbjct: 121 TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFF 180

Query: 181 SRNEPRYQTETPELKRERFSSMVCDAARPFLSARADRFVHELELFLASGLNIEAYDSVYL 240
            RNEP YQTETPELKR+RFS  + DAA+PFLSARADRF+ ELELFLASGLNIEAYDSVYL
Sbjct: 181 RRNEPEYQTETPELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWSEPVMPNVTINEDLGLKPVTPYLYIFDYDPEDGD 280
           QRLGW++P++P+V   EDLGLK VTPYLYIFD DP+DGD
Sbjct: 241 QRLGWNKPIVPSVANEEDLGLKSVTPYLYIFDCDPDDGD 279

[Close]

BLAST of Lag0006621 vs. ExPASy TrEMBL
Match: A0A5D3D454 (RING zinc finger protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00310 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 6.8e-135
Identity = 232/277 (83.75%), Postives = 255/277 (92.06%), Query Frame = 0


Query: 1   MSERAMELQSTAPMEMETSSSSYDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKV 60
           MSE++MELQS A ME++TS+S+ D T+PCPICLGPI Q SYLDKCFH FCYNCIVQWTKV
Sbjct: 1   MSEKSMELQSAASMEIKTSTSTSDYTDPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV 60

Query: 61  VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYY 120
           VSGKRSC LSSIKCPLCKTESSSIIHGLDGH FQRHYVN DFQDSFILSKAHKYRLQCYY
Sbjct: 61  VSGKRSCRLSSIKCPLCKTESSSIIHGLDGHHFQRHYVNPDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLDDIFNVQRYWKLRKYLQANQWLEIWLKRELQALIQEEDVDIIMHHLLGLISSFF 180
           TEPGFL+DIF+VQRYWKL+KYLQANQWLE+WLKRELQALIQEEDVDIIMHH +GLI+SFF
Sbjct: 121 TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFVGLINSFF 180

Query: 181 SRNEPRYQTETPELKRERFSSMVCDAARPFLSARADRFVHELELFLASGLNIEAYDSVYL 240
            RNEP+YQTETPELKR+RFS  + DAA+PFLSARADRF+ ELELFLASGLNIEAYDSVYL
Sbjct: 181 RRNEPKYQTETPELKRKRFSQTILDAAKPFLSARADRFMLELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWSEPVMPNVTINEDLGLKPVTPYLYIFDYDPED 278
           QRLGW+EP++ +V   EDLGLK VTPYLYIFD DP+D
Sbjct: 241 QRLGWNEPIVLSVANEEDLGLKSVTPYLYIFDNDPDD 277

[Close]

BLAST of Lag0006621 vs. TAIR 10
Match: AT3G05250.1 (RING/U-box superfamily protein )

HSP 1 Score: 295.4 bits (755), Expect = 4.7e-80
Identity = 147/277 (53.07%), Postives = 192/277 (69.31%), Query Frame = 0


Query: 12  APMEMETSSSSYD---DTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKRSCT 71
           A  E+   S S D   D +PCPICLG  ++ SYLD CFHKFC+NCI QW KVVS K S  
Sbjct: 2   AAKEIAGGSGSIDDGSDFDPCPICLGQFLRESYLDTCFHKFCFNCIKQWIKVVSSKASKQ 61

Query: 72  LSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYYTEPGFLDD 131
            SS+ CPLCKTE+ SIIH  DG  F+RHY++ +  D F+L+K  +YRLQCYYTE GFL D
Sbjct: 62  RSSVTCPLCKTENLSIIHNYDGCSFERHYIDPNIPDGFVLTKEQRYRLQCYYTESGFLAD 121

Query: 132 IFNVQRYWKLRKYLQANQWLEIWLKRELQALIQEEDVDIIMHHLLGLISSFFSRNEPRYQ 191
           +F+V R+WKL+K+LQ N+ LE WL+RELQAL+QEEDVDI++HHL+G++ SF  R + R +
Sbjct: 122 VFDVARFWKLQKFLQPNRCLEAWLRRELQALMQEEDVDIVLHHLVGVMESFCKRIKQRRK 181

Query: 192 TETPELK---RERFSSMVCDAARPFLSARADRFVHELELFLASGLNIEAYDSVYLQRLGW 251
            ET   +   +E+F ++V +AARPF+ AR DRFV ELELFLA+GLN+EAYD++Y Q L  
Sbjct: 182 QETRSAETTNQEQFKAVVSEAARPFVMARTDRFVDELELFLAAGLNLEAYDAIYKQGLEG 241

Query: 252 SE------PVMPNVTINEDLGLKPVTPYLYIFDYDPE 277
           +              + E      VTPYL+IF+ D +
Sbjct: 242 NNRREIGAASEEREEVEEHNVRTRVTPYLFIFEEDSD 278

[Close]

BLAST of Lag0006621 vs. TAIR 10
Match: AT2G39100.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 3.0e-10
Identity = 65/262 (24.81%), Postives = 104/262 (39.69%), Query Frame = 0


Query: 29  CPICLGPIIQ---PSYLDKCFHKFCYNCIVQWTKVVSGKRSCTLSSIK------------ 88
           CPICL  + +    + +  C H +C  CI +W+   S KR+C L + +            
Sbjct: 39  CPICLENLTERRSAAVITVCKHGYCLACIRKWS---SFKRNCPLCNTRFDSWFIVSDFAS 98

Query: 89  -------CPLCKTESSSIIHGLDGHCFQRHYVNRD---FQDSFILSKAHKYRLQCYYTEP 148
                   P+ +   +   H  +    +R  + R     ++S   S+   +R    +  P
Sbjct: 99  RKYHKEQLPILRDRETLTYH-RNNPSDRRRIIQRSRDVLENSSSRSRPLPWRRS--FGRP 158

Query: 149 GFLDD--IFNVQRYWKLRKY-----------------LQANQW--------LEIWLKREL 208
           G + D  IF  +  W+   Y                 L  N +        +E W++REL
Sbjct: 159 GSVPDSVIFQRKLQWRASIYTKQLRAVRLHSRRLELSLAVNDYTKAKITERIEPWIRREL 218

Query: 209 QALIQEEDVDIIMHHLLGLISSFFSRNEPRYQTETPELKRERFSSMVCDAARPFLSARAD 239
           QA++ + D  +I+H    L      R   R   +T  L  +  SS+     R FLS + D
Sbjct: 219 QAVLGDPDPSVIVHFASALFIKRLERENNRQTGQTGMLVEDEVSSL-----RKFLSDKVD 278

[Close]

BLAST of Lag0006621 vs. TAIR 10
Match: AT4G10940.1 (RING/U-box protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.2e-04
Identity = 23/76 (30.26%), Postives = 35/76 (46.05%), Query Frame = 0


Query: 5  AMELQSTAPMEMETSSSSYDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGK 64
          A  L     +E+E +  +  +   C IC+  II    LD C H FC+ CI  W+ +++  
Sbjct: 7  ASNLVEDEAVEVEHNGMTEIEGERCGICMDIIIDRGVLDCCQHWFCFECIDNWSTIMN-- 66

Query: 65 RSCTLSSIKCPLCKTE 81
                   CPLC+ E
Sbjct: 67 --------LCPLCQRE 72

[Close]

BLAST of Lag0006621 vs. TAIR 10
Match: AT3G05670.1 (RING/U-box protein )

HSP 1 Score: 42.4 bits (98), Expect = 7.2e-04
Identity = 23/61 (37.70%), Postives = 29/61 (47.54%), Query Frame = 0


Query: 27  NPCPICLGPIIQ---PSYLDKCFHKFCYNCIVQWTKVVSGKRSCTLSSIKCPLCKTESSS 85
           N C ICL           LD C H FC+ CI++W+KV S          +CPLCK    +
Sbjct: 411 NVCGICLSEEDMRRLKGTLDCCSHYFCFTCIMEWSKVES----------RCPLCKQRFRT 461

The following BLAST results are available for this feature:

BLAST of Lag0006621 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150768.1	6.5e-148	89.96	uncharacterized protein LOC111018833 [Momordica charantia]	[more]
XP_038889020.1	3.0e-145	89.89	uncharacterized protein LOC120078783 isoform X1 [Benincasa hispida]	[more]
XP_022946760.1	1.8e-142	88.69	uncharacterized protein LOC111450733 [Cucurbita moschata]	[more]
XP_023545827.1	4.1e-142	88.32	uncharacterized protein LOC111805146 [Cucurbita pepo subsp. pepo]	[more]
XP_022999126.1	6.9e-142	88.32	uncharacterized protein LOC111493604 [Cucurbita maxima]	[more]

BLAST of Lag0006621 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q80Z37	5.0e-10	31.90	E3 ubiquitin-protein ligase Topors OS=Mus musculus OX=10090 GN=Topors PE=1 SV=1	[more]
Q9NS56	8.5e-10	30.43	E3 ubiquitin-protein ligase Topors OS=Homo sapiens OX=9606 GN=TOPORS PE=1 SV=1	[more]
P29129	1.3e-05	39.34	E3 ubiquitin-protein ligase ICP0 OS=Suid herpesvirus 1 (strain Indiana-Funkhause...	[more]
Q9E1W2	2.8e-05	31.76	E3 ubiquitin-protein ligase IE61 OS=Cercopithecine herpesvirus 9 (strain DHV) OX...	[more]

BLAST of Lag0006621 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAB4	3.1e-148	89.96	uncharacterized protein LOC111018833 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1G4Z2	8.8e-143	88.69	uncharacterized protein LOC111450733 OS=Cucurbita moschata OX=3662 GN=LOC1114507...	[more]
A0A6J1KC78	3.3e-142	88.32	uncharacterized protein LOC111493604 OS=Cucurbita maxima OX=3661 GN=LOC111493604...	[more]
A0A0A0LLN5	2.2e-138	84.95	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021620 P...	[more]
A0A5D3D454	6.8e-135	83.75	RING zinc finger protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Lag0006621 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05250.1	4.7e-80	53.07	RING/U-box superfamily protein	[more]
AT2G39100.1	3.0e-10	24.81	RING/U-box superfamily protein	[more]
AT4G10940.1	4.2e-04	30.26	RING/U-box protein	[more]
AT3G05670.1	7.2e-04	37.70	RING/U-box protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 29..77 e-value: 9.4E-5 score: 31.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 29..78 score: 11.95817
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 29..77 e-value: 5.7E-9 score: 35.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 8..103 e-value: 1.3E-11 score: 45.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR47692	RING/U-BOX SUPERFAMILY PROTEIN	coord: 13..276
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 24..85
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 45..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0006621.1	Lag0006621.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding