Lag0006612 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0006612
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Cyclin
Location	chr6: 44180428 .. 44181844 (+)
RNA-Seq Expression	Lag0006612
Synteny	Lag0006612

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAAAATGGCAGAAAATAACATGGATGTTCAAGTAGAAACAGATTCGCTTCTTGGACTGAGTGAGTCTGGGAAACTTATACCGAGCTCTCCTCGAGTGTTGTCGATTCTTTCCTCTGTTTTCGAGAGGTCGATTCAGAAAAATGAAAAATTATTGAAAAGACTCAAAAAGAAAGACACTGTTACAATTTTCCATGGTTCCCGAGCTCCCACCATGGGCATTGGACAGTATATCGATCGCATCTCGAAGTACACATGTTGCGGCACTCCTTGCTTAGTTGTTGCCTACATATATATTGAAAGGTATCTTCAAAAGATGAATGCTTATTTAACTTCATTGAACATCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCAAAGTTTACCGATGCCGGGTAAGTTCGAATATCACTTAACTCTGTAATTCACTTGAGATGACAAGATTTTGAGCTCTGTTAATATTCTGCAATTTAGTTTTTTCAATTCACACCACCCTCTCTTTCAGTTGGCTTTACCTTTCATCCCTTGAATTGAGATCATATGAGGAATGCATAAGTTCAAGTTTATATGAATTGGCATTTGTGTTGGTGAAAAATGGGCTAAATATATGATTTAGACCCCTAATGTTTGGGTCATTTTCAATTTTGTCTATCATCTTTTAAAAGTTTCTGATTTTTTTTCAACAATTCTGTGTTGTCACCAAAATGGTAAATTTTATTGATGAAGAACCGATGTTGTGATGCCAAAAACATAGTTATTAATTGAGTCGAAAATATCCTATATTTTAATTTGATGGAATAGACATACATCATAAAATCGAAAATTTACTCACAATTTGAGAAGCTCATAAAGTGACACTCACACGACGCACGTAGACATTATCATTCTTTTAAGTTTAGTGACATTAAGGATTTGATTGGAAGGAAATCAGTGCAAAAAAGATAAATTTTAAAATTTTAAAAGATTAGGCACGGAATATAAAAATGACTCAAACATTGCTCGGAAGATATCAACATGCAACTCAAACCAGAGAGTCATTTGTTTGATATTGCTAAACCGATATCACGCGTCTCATCTGTCATCATTTTGAAAATTTCCTCCCAATTTCTTGGATGTTATAACACAAATTTTGATGTGAACAACTTAATGTGGTATGCAATGCAGGAGCTATAACAATACTTTCTATGCCAAAGTAGGAGGAGTGAGCACAACAGAAATGAACAGAATGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCAGATGTTTTCAGGAACAACTGTTTGCAGCTGCAAAAGGAAGGTCTCGGGGAGAACCAGATCGATCGACGACCCGGTAACAAAACTCGAACTAAATGTTTACCTCAAATAGCAGGCTATACTTGCAGTGCCATTTAA

mRNA sequence

ATGAGAAAAATGGCAGAAAATAACATGGATGTTCAAGTAGAAACAGATTCGCTTCTTGGACTGAGTGAGTCTGGGAAACTTATACCGAGCTCTCCTCGAGTGTTGTCGATTCTTTCCTCTGTTTTCGAGAGGTCGATTCAGAAAAATGAAAAATTATTGAAAAGACTCAAAAAGAAAGACACTGTTACAATTTTCCATGGTTCCCGAGCTCCCACCATGGGCATTGGACAGTATATCGATCGCATCTCGAAGTACACATGTTGCGGCACTCCTTGCTTAGTTGTTGCCTACATATATATTGAAAGGTATCTTCAAAAGATGAATGCTTATTTAACTTCATTGAACATCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCAAAGTTTACCGATGCCGGGAGCTATAACAATACTTTCTATGCCAAAGTAGGAGGAGTGAGCACAACAGAAATGAACAGAATGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCAGATGTTTTCAGGAACAACTGTTTGCAGCTGCAAAAGGAAGGTCTCGGGGAGAACCAGATCGATCGACGACCCGGTAACAAAACTCGAACTAAATGTTTACCTCAAATAGCAGGCTATACTTGCAGTGCCATTTAA

Coding sequence (CDS)

ATGAGAAAAATGGCAGAAAATAACATGGATGTTCAAGTAGAAACAGATTCGCTTCTTGGACTGAGTGAGTCTGGGAAACTTATACCGAGCTCTCCTCGAGTGTTGTCGATTCTTTCCTCTGTTTTCGAGAGGTCGATTCAGAAAAATGAAAAATTATTGAAAAGACTCAAAAAGAAAGACACTGTTACAATTTTCCATGGTTCCCGAGCTCCCACCATGGGCATTGGACAGTATATCGATCGCATCTCGAAGTACACATGTTGCGGCACTCCTTGCTTAGTTGTTGCCTACATATATATTGAAAGGTATCTTCAAAAGATGAATGCTTATTTAACTTCATTGAACATCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCAAAGTTTACCGATGCCGGGAGCTATAACAATACTTTCTATGCCAAAGTAGGAGGAGTGAGCACAACAGAAATGAACAGAATGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCAGATGTTTTCAGGAACAACTGTTTGCAGCTGCAAAAGGAAGGTCTCGGGGAGAACCAGATCGATCGACGACCCGGTAACAAAACTCGAACTAAATGTTTACCTCAAATAGCAGGCTATACTTGCAGTGCCATTTAA

Protein sequence

MRKMAENNMDVQVETDSLLGLSESGKLIPSSPRVLSILSSVFERSIQKNEKLLKRLKKKDTVTIFHGSRAPTMGIGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMNAYLTSLNIHRLLITSIMVAAKFTDAGSYNNTFYAKVGGVSTTEMNRMEIEFLFNLDFRLHVTADVFRNNCLQLQKEGLGENQIDRRPGNKTRTKCLPQIAGYTCSAI

Homology

[Close]

BLAST of Lag0006612 vs. NCBI nr
Match: XP_022946012.1 (cyclin-P3-1-like [Cucurbita moschata] >XP_022946013.1 cyclin-P3-1-like [Cucurbita moschata] >XP_023521765.1 cyclin-P3-1-like [Cucurbita pepo subsp. pepo] >XP_023545675.1 cyclin-P3-1 [Cucurbita pepo subsp. pepo] >XP_023545676.1 cyclin-P3-1 [Cucurbita pepo subsp. pepo] >KAG7030248.1 Cyclin-P3-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 383.6 bits (984), Expect = 1.1e-102
Identity = 193/215 (89.77%), Postives = 198/215 (92.09%), Query Frame = 0


Query: 1   MRKMAENNMDVQVETDSLLGLSESGKLIPSSPRVLSILSSVFERSIQKNEKLLKRLKKKD 60
           MRKMA+N  D QVETDSLLGLSESGKLIPSS RVLSILSS FERSIQKNEKLLKRLKKKD
Sbjct: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60

Query: 61  TVTIFHGSRAPTMGIGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMNAYLTSLNIHRLL 120
           +VTIFHGSRAPTM  GQYIDRISKYTCCGTPCLVVAYIYIERYLQKM AYLTSLN+HRLL
Sbjct: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFTDAGSYNNTFYAKVGGVSTTEMNRMEIEFLFNLDFRLHVTADVFRNNCLQ 180
           ITSIMVAAKF DAG YNN FYAKVGGVST EMN MEIE LFNLDFRLHVTADVFR +CLQ
Sbjct: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180

Query: 181 LQKEGLGENQIDRRPGNKTRTKCLPQIAGYTCSAI 216
           LQKEGLGENQIDRRPGNKTRT+CLPQIA YTC AI
Sbjct: 181 LQKEGLGENQIDRRPGNKTRTRCLPQIASYTCRAI 215

[Close]

BLAST of Lag0006612 vs. NCBI nr
Match: XP_038886918.1 (cyclin-P3-1 [Benincasa hispida] >XP_038886919.1 cyclin-P3-1 [Benincasa hispida] >XP_038886920.1 cyclin-P3-1 [Benincasa hispida] >XP_038886922.1 cyclin-P3-1 [Benincasa hispida] >XP_038886923.1 cyclin-P3-1 [Benincasa hispida])

HSP 1 Score: 378.3 bits (970), Expect = 4.6e-101
Identity = 190/216 (87.96%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 1   MRKMAENNMDVQVETDSLLGLSESGKLIPSSPRVLSILSSVFERSIQKNEKLLKRLKKKD 60
           MR++A+N MD QVE DSLLGL ESGKLIPSSPRVLSILS+VFERSIQKNEKLLKRLKKKD
Sbjct: 1   MREVADNGMDFQVEIDSLLGLGESGKLIPSSPRVLSILSTVFERSIQKNEKLLKRLKKKD 60

Query: 61  TVTIFHGSRAPTMGIGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMNAYLTSLNIHRLL 120
            VTIFHGSRAPTMGIGQYIDRI KYTCCGTPCLVVAYIYIERYLQKM+AYLT+LNIHRLL
Sbjct: 61  NVTIFHGSRAPTMGIGQYIDRILKYTCCGTPCLVVAYIYIERYLQKMDAYLTNLNIHRLL 120

Query: 121 ITSIMVAAKFTDAGSYNNTFYAKVGGVSTTEMNRMEIEFLFNLDFRLHVTADVFRNNCLQ 180
           ITSIMVAAKF DAG YNNTFYAKVGGVST EMN +EIEFLFNLDFRLHVTAD+F N+CLQ
Sbjct: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADIFSNHCLQ 180

Query: 181 LQKEGL-GENQIDRRPGNKTRTKCLPQIAGYTCSAI 216
           LQKE L GENQ+D R GNKTRTKCLPQI GYTCSAI
Sbjct: 181 LQKEALGGENQVDHRAGNKTRTKCLPQITGYTCSAI 216

[Close]

BLAST of Lag0006612 vs. NCBI nr
Match: XP_022999267.1 (cyclin-P3-1-like [Cucurbita maxima] >XP_022999268.1 cyclin-P3-1-like [Cucurbita maxima])

HSP 1 Score: 375.6 bits (963), Expect = 3.0e-100
Identity = 189/215 (87.91%), Postives = 196/215 (91.16%), Query Frame = 0


Query: 1   MRKMAENNMDVQVETDSLLGLSESGKLIPSSPRVLSILSSVFERSIQKNEKLLKRLKKKD 60
           MRKMA+N  D QVET S+LGLSESGKLIPSS RVLSILSS FERSIQKNEKLLKRLKKKD
Sbjct: 1   MRKMADNGKDFQVETGSILGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60

Query: 61  TVTIFHGSRAPTMGIGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMNAYLTSLNIHRLL 120
           +VTIFHGSRAPTM  GQYI+RISKYTCCGTPCLVVAYIYIERYLQKM AYLTSLN+HRLL
Sbjct: 61  SVTIFHGSRAPTMSTGQYINRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFTDAGSYNNTFYAKVGGVSTTEMNRMEIEFLFNLDFRLHVTADVFRNNCLQ 180
           ITSIMVAAKF DAG YNN FYAKVGGVST EMN MEIE LFNLDFRLHVTADVFR +CLQ
Sbjct: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180

Query: 181 LQKEGLGENQIDRRPGNKTRTKCLPQIAGYTCSAI 216
           LQKEG GENQIDRRPGNKTRT+CLPQIA YTC AI
Sbjct: 181 LQKEGPGENQIDRRPGNKTRTRCLPQIASYTCRAI 215

[Close]

BLAST of Lag0006612 vs. NCBI nr
Match: XP_008454704.1 (PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454712.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454721.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454727.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454735.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_016901631.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >ABR67416.1 cyclin-dependent kinase [Cucumis melo subsp. melo])

HSP 1 Score: 374.0 bits (959), Expect = 8.6e-100
Identity = 189/216 (87.50%), Postives = 199/216 (92.13%), Query Frame = 0


Query: 1   MRKMAENNMDVQVETDSLLGLSESGKLIPSSPRVLSILSSVFERSIQKNEKLLKRLKKKD 60
           MR+MA N+MD QVETDSLLGLSESGKLI SSP+VLSILSSVFERSIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  TVTIFHGSRAPTMGIGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMNAYLTSLNIHRLL 120
            VTIFH SRAPTMGIGQYIDRI KYTCCGT CL+VAYIYIERYLQKM+ YLTSLN+HRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFTDAGSYNNTFYAKVGGVSTTEMNRMEIEFLFNLDFRLHVTADVFRNNCLQ 180
           ITSIMVAAKFTDAG YNNTFYAKVGGVST EMN +EIEFLFNLDFRLHVTADVF  +CLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEGL-GENQIDRRPGNKTRTKCLPQIAGYTCSAI 216
           LQKE L GENQ++RRPGNK RTKCLPQI GYTCSAI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Lag0006612 vs. NCBI nr
Match: KAA0047963.1 (cyclin-P3-1 [Cucumis melo var. makuwa] >TYK18312.1 cyclin-P3-1 [Cucumis melo var. makuwa])

HSP 1 Score: 369.8 bits (948), Expect = 1.6e-98
Identity = 187/213 (87.79%), Postives = 196/213 (92.02%), Query Frame = 0


Query: 4   MAENNMDVQVETDSLLGLSESGKLIPSSPRVLSILSSVFERSIQKNEKLLKRLKKKDTVT 63
           MA N+MD QVETDSLLGLSESGKLI SSP+VLSILSSVFERSIQKNEKLLKRLKKKD VT
Sbjct: 1   MANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVT 60

Query: 64  IFHGSRAPTMGIGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMNAYLTSLNIHRLLITS 123
           IFH SRAPTMGIGQYIDRI KYTCCGT CL+VAYIYIERYLQKM+ YLTSLN+HRLLITS
Sbjct: 61  IFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITS 120

Query: 124 IMVAAKFTDAGSYNNTFYAKVGGVSTTEMNRMEIEFLFNLDFRLHVTADVFRNNCLQLQK 183
           IMVAAKFTDAG YNNTFYAKVGGVST EMN +EIEFLFNLDFRLHVTADVF  +CLQLQK
Sbjct: 121 IMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK 180

Query: 184 EGL-GENQIDRRPGNKTRTKCLPQIAGYTCSAI 216
           E L GENQ++RRPGNK RTKCLPQI GYTCSAI
Sbjct: 181 EVLGGENQVERRPGNKARTKCLPQITGYTCSAI 213

[Close]

BLAST of Lag0006612 vs. ExPASy Swiss-Prot
Match: Q75HV0 (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.3e-46
Identity = 93/166 (56.02%), Postives = 123/166 (74.10%), Query Frame = 0


Query: 19  LGLSESGKLIPSSPRVLSILSSVFERSIQKNEKLLKRLKKKDTVTIFHGSRAPTMGIGQY 78
           L +S+S K     P+VL +L++  +RS+QKNE LL   K KD+ TIFHG RAP + I  Y
Sbjct: 23  LTVSQSKKNNTEYPKVLLLLAAYLDRSVQKNEDLLDSNKIKDSSTIFHGHRAPDLSIKLY 82

Query: 79  IDRISKYTCCGTPCLVVAYIYIERYLQKMNAYLTSLNIHRLLITSIMVAAKFTDAGSYNN 138
            +RI KY+ C   C V+A IY+ERYLQ+ + Y+TSL++HRLLITS++VAAKFTD   +NN
Sbjct: 83  AERIFKYSECSPSCFVLALIYMERYLQQPHVYMTSLSVHRLLITSVVVAAKFTDDAFFNN 142

Query: 139 TFYAKVGGVSTTEMNRMEIEFLFNLDFRLHVTADVFRNNCLQLQKE 185
            FYA+VGG+ST EMNR+E++ LFNLDFRL V  + F + CLQL+KE
Sbjct: 143 AFYARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEKE 188

[Close]

BLAST of Lag0006612 vs. ExPASy Swiss-Prot
Match: Q8LB60 (Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-38
Identity = 82/174 (47.13%), Postives = 110/174 (63.22%), Query Frame = 0


Query: 19  LGLSESGKLIPSSPRVLSILSSVFERSIQKNEKLLKRLKKKDTVTIFHGSRAPTMGIGQY 78
           LGL   GK +   P VLS LSS  ERS+  N      L   D+VT+F G   P + I  Y
Sbjct: 19  LGLIIEGKRLKKPPTVLSRLSSSLERSLLLNHDDKILLGSPDSVTVFDGRSPPEISIAHY 78

Query: 79  IDRISKYTCCGTPCLVVAYIYIERYLQKMNAYLTSLNIHRLLITSIMVAAKFTDAGSYNN 138
           +DRI KY+CC   C V+A+IYI+ +L K  A L  LN+HRL+IT++M+AAK  D   +NN
Sbjct: 79  LDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIITTVMLAAKVFDDRYFNN 138

Query: 139 TFYAKVGGVSTTEMNRMEIEFLFNLDFRLHVTADVFRNNCLQLQKEGLGENQID 193
            +YA+VGGV+T E+NR+E+E LF LDF+L V    F  +C QL+K+     QI+
Sbjct: 139 AYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQNRDGFQIE 192

[Close]

BLAST of Lag0006612 vs. ExPASy Swiss-Prot
Match: Q9LJ45 (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-35
Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 0


Query: 30  SSPRVLSILSSVFERSIQKNEKLLKRLKK-KDTVTIFHGSRAPTMGIGQYIDRISKYTCC 89
           ++PRVL+I+S V E+ + +NE L K+ K    ++  FHG RAP++ I +Y++RI KYT C
Sbjct: 23  ATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKC 82

Query: 90  GTPCLVVAYIYIERYLQK-MNAYLTSLNIHRLLITSIMVAAKFTDAGSYNNTFYAKVGGV 149
              C VV Y+YI+R   K   + + SLN+HRLL+T +M+AAK  D   YNN FYA+VGGV
Sbjct: 83  SPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGV 142

Query: 150 STTEMNRMEIEFLFNLDFRLHVTADVFRNNCLQLQKE 185
           S  ++N+ME+E LF LDFR+ V+  VF + C  L+KE
Sbjct: 143 SNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKE 179

[Close]

BLAST of Lag0006612 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.7e-32
Identity = 70/153 (45.75%), Postives = 100/153 (65.36%), Query Frame = 0


Query: 33  RVLSILSSVFERSIQKNEKLLKRLKKKDTVTIFHGSRAPTMGIGQYIDRISKYTCCGTPC 92
           ++++ LSS+ ER  + N+   +   +   V++FHG   PT+ I  Y++RI KY  C   C
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 93  LVVAYIYIERYLQKMNAY-LTSLNIHRLLITSIMVAAKFTDAGSYNNTFYAKVGGVSTTE 152
            VVAY+Y++R+  +  +  + S N+HRLLITS+MVAAKF D   YNN +YAKVGG+ST E
Sbjct: 72  FVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKE 131

Query: 153 MNRMEIEFLFNLDFRLHVTADVFRNNCLQLQKE 185
           MN +E++FLF L F L+VT + F      LQKE
Sbjct: 132 MNFLELDFLFGLGFELNVTPNTFNAYFSYLQKE 164

[Close]

BLAST of Lag0006612 vs. ExPASy Swiss-Prot
Match: Q9LY16 (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.4e-31
Identity = 64/154 (41.56%), Postives = 103/154 (66.88%), Query Frame = 0


Query: 32  PRVLSILSSVFERSIQKNEKLLKRLKKKDTVTIFHGSRAPTMGIGQYIDRISKYTCCGTP 91
           P V++ +SS+ +R  + N+ L +  ++   ++ F+    P++ I  Y++RI KY  C   
Sbjct: 21  PNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSDS 80

Query: 92  CLVVAYIYIERYLQKMNAY-LTSLNIHRLLITSIMVAAKFTDAGSYNNTFYAKVGGVSTT 151
           C +VAYIY++R++QK     + S N+HRL+ITS++V+AKF D   YNN FYAKVGG++T 
Sbjct: 81  CYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGITTE 140

Query: 152 EMNRMEIEFLFNLDFRLHVTADVFRNNCLQLQKE 185
           EMN +E++FLF + F+L+VT   + + C  LQ+E
Sbjct: 141 EMNLLELDFLFGIGFQLNVTISTYNDYCSSLQRE 174

[Close]

BLAST of Lag0006612 vs. ExPASy TrEMBL
Match: A0A6J1G2L7 (Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111450231 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 5.3e-103
Identity = 193/215 (89.77%), Postives = 198/215 (92.09%), Query Frame = 0


Query: 1   MRKMAENNMDVQVETDSLLGLSESGKLIPSSPRVLSILSSVFERSIQKNEKLLKRLKKKD 60
           MRKMA+N  D QVETDSLLGLSESGKLIPSS RVLSILSS FERSIQKNEKLLKRLKKKD
Sbjct: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60

Query: 61  TVTIFHGSRAPTMGIGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMNAYLTSLNIHRLL 120
           +VTIFHGSRAPTM  GQYIDRISKYTCCGTPCLVVAYIYIERYLQKM AYLTSLN+HRLL
Sbjct: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFTDAGSYNNTFYAKVGGVSTTEMNRMEIEFLFNLDFRLHVTADVFRNNCLQ 180
           ITSIMVAAKF DAG YNN FYAKVGGVST EMN MEIE LFNLDFRLHVTADVFR +CLQ
Sbjct: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180

Query: 181 LQKEGLGENQIDRRPGNKTRTKCLPQIAGYTCSAI 216
           LQKEGLGENQIDRRPGNKTRT+CLPQIA YTC AI
Sbjct: 181 LQKEGLGENQIDRRPGNKTRTRCLPQIASYTCRAI 215

[Close]

BLAST of Lag0006612 vs. ExPASy TrEMBL
Match: A0A6J1KJ49 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111493690 PE=3 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.4e-100
Identity = 189/215 (87.91%), Postives = 196/215 (91.16%), Query Frame = 0


Query: 1   MRKMAENNMDVQVETDSLLGLSESGKLIPSSPRVLSILSSVFERSIQKNEKLLKRLKKKD 60
           MRKMA+N  D QVET S+LGLSESGKLIPSS RVLSILSS FERSIQKNEKLLKRLKKKD
Sbjct: 1   MRKMADNGKDFQVETGSILGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60

Query: 61  TVTIFHGSRAPTMGIGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMNAYLTSLNIHRLL 120
           +VTIFHGSRAPTM  GQYI+RISKYTCCGTPCLVVAYIYIERYLQKM AYLTSLN+HRLL
Sbjct: 61  SVTIFHGSRAPTMSTGQYINRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFTDAGSYNNTFYAKVGGVSTTEMNRMEIEFLFNLDFRLHVTADVFRNNCLQ 180
           ITSIMVAAKF DAG YNN FYAKVGGVST EMN MEIE LFNLDFRLHVTADVFR +CLQ
Sbjct: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180

Query: 181 LQKEGLGENQIDRRPGNKTRTKCLPQIAGYTCSAI 216
           LQKEG GENQIDRRPGNKTRT+CLPQIA YTC AI
Sbjct: 181 LQKEGPGENQIDRRPGNKTRTRCLPQIASYTCRAI 215

[Close]

BLAST of Lag0006612 vs. ExPASy TrEMBL
Match: A0A1S3C004 (cyclin-P3-1 OS=Cucumis melo OX=3656 GN=LOC103495057 PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.2e-100
Identity = 189/216 (87.50%), Postives = 199/216 (92.13%), Query Frame = 0


Query: 1   MRKMAENNMDVQVETDSLLGLSESGKLIPSSPRVLSILSSVFERSIQKNEKLLKRLKKKD 60
           MR+MA N+MD QVETDSLLGLSESGKLI SSP+VLSILSSVFERSIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  TVTIFHGSRAPTMGIGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMNAYLTSLNIHRLL 120
            VTIFH SRAPTMGIGQYIDRI KYTCCGT CL+VAYIYIERYLQKM+ YLTSLN+HRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFTDAGSYNNTFYAKVGGVSTTEMNRMEIEFLFNLDFRLHVTADVFRNNCLQ 180
           ITSIMVAAKFTDAG YNNTFYAKVGGVST EMN +EIEFLFNLDFRLHVTADVF  +CLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEGL-GENQIDRRPGNKTRTKCLPQIAGYTCSAI 216
           LQKE L GENQ++RRPGNK RTKCLPQI GYTCSAI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Lag0006612 vs. ExPASy TrEMBL
Match: A6YTD1 (Cyclin-dependent kinase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.2e-100
Identity = 189/216 (87.50%), Postives = 199/216 (92.13%), Query Frame = 0


Query: 1   MRKMAENNMDVQVETDSLLGLSESGKLIPSSPRVLSILSSVFERSIQKNEKLLKRLKKKD 60
           MR+MA N+MD QVETDSLLGLSESGKLI SSP+VLSILSSVFERSIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  TVTIFHGSRAPTMGIGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMNAYLTSLNIHRLL 120
            VTIFH SRAPTMGIGQYIDRI KYTCCGT CL+VAYIYIERYLQKM+ YLTSLN+HRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFTDAGSYNNTFYAKVGGVSTTEMNRMEIEFLFNLDFRLHVTADVFRNNCLQ 180
           ITSIMVAAKFTDAG YNNTFYAKVGGVST EMN +EIEFLFNLDFRLHVTADVF  +CLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEGL-GENQIDRRPGNKTRTKCLPQIAGYTCSAI 216
           LQKE L GENQ++RRPGNK RTKCLPQI GYTCSAI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Lag0006612 vs. ExPASy TrEMBL
Match: A0A5A7TWJ7 (Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00220 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 7.9e-99
Identity = 187/213 (87.79%), Postives = 196/213 (92.02%), Query Frame = 0


Query: 4   MAENNMDVQVETDSLLGLSESGKLIPSSPRVLSILSSVFERSIQKNEKLLKRLKKKDTVT 63
           MA N+MD QVETDSLLGLSESGKLI SSP+VLSILSSVFERSIQKNEKLLKRLKKKD VT
Sbjct: 1   MANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVT 60

Query: 64  IFHGSRAPTMGIGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMNAYLTSLNIHRLLITS 123
           IFH SRAPTMGIGQYIDRI KYTCCGT CL+VAYIYIERYLQKM+ YLTSLN+HRLLITS
Sbjct: 61  IFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITS 120

Query: 124 IMVAAKFTDAGSYNNTFYAKVGGVSTTEMNRMEIEFLFNLDFRLHVTADVFRNNCLQLQK 183
           IMVAAKFTDAG YNNTFYAKVGGVST EMN +EIEFLFNLDFRLHVTADVF  +CLQLQK
Sbjct: 121 IMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK 180

Query: 184 EGL-GENQIDRRPGNKTRTKCLPQIAGYTCSAI 216
           E L GENQ++RRPGNK RTKCLPQI GYTCSAI
Sbjct: 181 EVLGGENQVERRPGNKARTKCLPQITGYTCSAI 213

[Close]

BLAST of Lag0006612 vs. TAIR 10
Match: AT3G05327.1 (Cyclin family protein )

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-42
Identity = 90/174 (51.72%), Postives = 119/174 (68.39%), Query Frame = 0


Query: 19  LGLSESGKLIPSS--PRVLSILSSVFERSIQKNEKLL-KRLKKKDTVTIFHGSRAPTMGI 78
           LGL E     P S  PRV+++L+S  E+ IQKN+K    R  K D +T+FHGS+AP++ I
Sbjct: 16  LGLLEDSDQPPDSTPPRVITLLASTLEKMIQKNKKKFHTRHNKADEITMFHGSKAPSLSI 75

Query: 79  GQYIDRISKYTCCGTPCLVVAYIYIERYLQKMNA-----YLTSLNIHRLLITSIMVAAKF 138
            +Y +RI +Y  C   C V A+ YI RYLQ+  A      LTSLN+HRLLITS++VAAKF
Sbjct: 76  YRYTERIHRYAQCSPVCFVAAFAYILRYLQRPEATSTARRLTSLNVHRLLITSLLVAAKF 135

Query: 139 TDAGSYNNTFYAKVGGVSTTEMNRMEIEFLFNLDFRLHVTADVFRNNCLQLQKE 185
            +   YNN +YAK+GGVST EMNR+E  FL ++DFRL++T + F  +CL LQKE
Sbjct: 136 LERQCYNNAYYAKIGGVSTEEMNRLERTFLVDVDFRLYITTETFEKHCLMLQKE 189

[Close]

BLAST of Lag0006612 vs. TAIR 10
Match: AT3G63120.1 (cyclin p1;1 )

HSP 1 Score: 161.4 bits (407), Expect = 8.2e-40
Identity = 82/174 (47.13%), Postives = 110/174 (63.22%), Query Frame = 0


Query: 19  LGLSESGKLIPSSPRVLSILSSVFERSIQKNEKLLKRLKKKDTVTIFHGSRAPTMGIGQY 78
           LGL   GK +   P VLS LSS  ERS+  N      L   D+VT+F G   P + I  Y
Sbjct: 19  LGLIIEGKRLKKPPTVLSRLSSSLERSLLLNHDDKILLGSPDSVTVFDGRSPPEISIAHY 78

Query: 79  IDRISKYTCCGTPCLVVAYIYIERYLQKMNAYLTSLNIHRLLITSIMVAAKFTDAGSYNN 138
           +DRI KY+CC   C V+A+IYI+ +L K  A L  LN+HRL+IT++M+AAK  D   +NN
Sbjct: 79  LDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIITTVMLAAKVFDDRYFNN 138

Query: 139 TFYAKVGGVSTTEMNRMEIEFLFNLDFRLHVTADVFRNNCLQLQKEGLGENQID 193
            +YA+VGGV+T E+NR+E+E LF LDF+L V    F  +C QL+K+     QI+
Sbjct: 139 AYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQNRDGFQIE 192

[Close]

BLAST of Lag0006612 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 )

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36
Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 0


Query: 30  SSPRVLSILSSVFERSIQKNEKLLKRLKK-KDTVTIFHGSRAPTMGIGQYIDRISKYTCC 89
           ++PRVL+I+S V E+ + +NE L K+ K    ++  FHG RAP++ I +Y++RI KYT C
Sbjct: 23  ATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKC 82

Query: 90  GTPCLVVAYIYIERYLQK-MNAYLTSLNIHRLLITSIMVAAKFTDAGSYNNTFYAKVGGV 149
              C VV Y+YI+R   K   + + SLN+HRLL+T +M+AAK  D   YNN FYA+VGGV
Sbjct: 83  SPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGV 142

Query: 150 STTEMNRMEIEFLFNLDFRLHVTADVFRNNCLQLQKE 185
           S  ++N+ME+E LF LDFR+ V+  VF + C  L+KE
Sbjct: 143 SNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKE 179

[Close]

BLAST of Lag0006612 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 )

HSP 1 Score: 140.2 bits (352), Expect = 1.9e-33
Identity = 70/153 (45.75%), Postives = 100/153 (65.36%), Query Frame = 0


Query: 33  RVLSILSSVFERSIQKNEKLLKRLKKKDTVTIFHGSRAPTMGIGQYIDRISKYTCCGTPC 92
           ++++ LSS+ ER  + N+   +   +   V++FHG   PT+ I  Y++RI KY  C   C
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 93  LVVAYIYIERYLQKMNAY-LTSLNIHRLLITSIMVAAKFTDAGSYNNTFYAKVGGVSTTE 152
            VVAY+Y++R+  +  +  + S N+HRLLITS+MVAAKF D   YNN +YAKVGG+ST E
Sbjct: 72  FVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKE 131

Query: 153 MNRMEIEFLFNLDFRLHVTADVFRNNCLQLQKE 185
           MN +E++FLF L F L+VT + F      LQKE
Sbjct: 132 MNFLELDFLFGLGFELNVTPNTFNAYFSYLQKE 164

[Close]

BLAST of Lag0006612 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 )

HSP 1 Score: 137.9 bits (346), Expect = 9.7e-33
Identity = 64/154 (41.56%), Postives = 103/154 (66.88%), Query Frame = 0


Query: 32  PRVLSILSSVFERSIQKNEKLLKRLKKKDTVTIFHGSRAPTMGIGQYIDRISKYTCCGTP 91
           P V++ +SS+ +R  + N+ L +  ++   ++ F+    P++ I  Y++RI KY  C   
Sbjct: 21  PNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSDS 80

Query: 92  CLVVAYIYIERYLQKMNAY-LTSLNIHRLLITSIMVAAKFTDAGSYNNTFYAKVGGVSTT 151
           C +VAYIY++R++QK     + S N+HRL+ITS++V+AKF D   YNN FYAKVGG++T 
Sbjct: 81  CYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGITTE 140

Query: 152 EMNRMEIEFLFNLDFRLHVTADVFRNNCLQLQKE 185
           EMN +E++FLF + F+L+VT   + + C  LQ+E
Sbjct: 141 EMNLLELDFLFGIGFQLNVTISTYNDYCSSLQRE 174

The following BLAST results are available for this feature:

BLAST of Lag0006612 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946012.1	1.1e-102	89.77	cyclin-P3-1-like [Cucurbita moschata] >XP_022946013.1 cyclin-P3-1-like [Cucurbit...	[more]
XP_038886918.1	4.6e-101	87.96	cyclin-P3-1 [Benincasa hispida] >XP_038886919.1 cyclin-P3-1 [Benincasa hispida] ...	[more]
XP_022999267.1	3.0e-100	87.91	cyclin-P3-1-like [Cucurbita maxima] >XP_022999268.1 cyclin-P3-1-like [Cucurbita ...	[more]
XP_008454704.1	8.6e-100	87.50	PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454712.1 PREDICTED: cyclin-P3-1 [Cu...	[more]
KAA0047963.1	1.6e-98	87.79	cyclin-P3-1 [Cucumis melo var. makuwa] >TYK18312.1 cyclin-P3-1 [Cucumis melo var...	[more]

BLAST of Lag0006612 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q75HV0	3.3e-46	56.02	Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1	[more]
Q8LB60	1.1e-38	47.13	Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2	[more]
Q9LJ45	2.0e-35	48.41	Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1	[more]
O80513	2.7e-32	45.75	Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1	[more]
Q9LY16	1.4e-31	41.56	Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1	[more]

BLAST of Lag0006612 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2L7	5.3e-103	89.77	Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111450231 PE=3 SV=1	[more]
A0A6J1KJ49	1.4e-100	87.91	Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111493690 PE=3 SV=1	[more]
A0A1S3C004	4.2e-100	87.50	cyclin-P3-1 OS=Cucumis melo OX=3656 GN=LOC103495057 PE=3 SV=1	[more]
A6YTD1	4.2e-100	87.50	Cyclin-dependent kinase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A5A7TWJ7	7.9e-99	87.79	Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00220 PE=3 SV...	[more]

BLAST of Lag0006612 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05327.1	1.8e-42	51.72	Cyclin family protein	[more]
AT3G63120.1	8.2e-40	47.13	cyclin p1;1	[more]
AT3G21870.1	1.4e-36	48.41	cyclin p2;1	[more]
AT2G44740.1	1.9e-33	45.75	cyclin p4;1	[more]
AT5G07450.1	9.7e-33	41.56	cyclin p4;3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013922	Cyclin PHO80-like	PFAM	PF08613	Cyclin	coord: 54..167 e-value: 3.9E-31 score: 108.6
IPR012389	Cyclin P/U	PIRSF	PIRSF027110	PREG	coord: 3..210 e-value: 3.0E-64 score: 214.6
None	No IPR available	GENE3D	1.10.472.10		coord: 29..209 e-value: 1.1E-48 score: 167.6
None	No IPR available	PANTHER	PTHR15615:SF80	CYCLIN	coord: 5..199
None	No IPR available	PANTHER	PTHR15615	UNCHARACTERIZED	coord: 5..199
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 78..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0006612.1	Lag0006612.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0019901	protein kinase binding