Lag0006603 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0006603
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	F-box domain LysM domain containing protein
Location	chr6: 44126346 .. 44128159 (-)
RNA-Seq Expression	Lag0006603
Synteny	Lag0006603

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATGCTGTTGCGACCAAGACGACGACGTTGAGATCCTGAGGCACCTCAATCCTTCGCCGACCGTTCAATCTCCGCCGCCGGATTCCTCCACCGCCGTACTATCTCCGATGAATTCTCACTTCTTAGCTCTCTCCTGCCGCGACATCCTCCGCCTCATCTTCGAGAAGCTTTCCATTCCCGACTTGGCTCGTTCCAGCTGCGTTTCCCGTCTCTGGCACTCCGTTGCTTCCGATCAGGAGATTGTCGCCGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGACGTGGTCGGCAAGCCAAGCTCCGGGAGCTTCTGGAGAGATAATTGCCTTGGAAAGTTTGCGATCTCCCATCGGATTCTCCGCGGCGATAGCGTGGCTAGTCTTGCCGTTAAGTATTCGGTTCAGGTATGTGCTTCGGAAATTGTTGTTGTTTAATTAATGTGGAAGCGACTGGAAAATAGGGATTGAACGGGTAGAATTTCTGAGAGTTTATTCAGTTTTGAGGAGTTGCGATCATCAATTTCCTTGATCGTGCATTCTCTTTGGCTAGAGTTTAATCTTGTTTATCTGAAGAACGCGACTATCCGACGGTTTTATTGCTGTTCAAACTTCAAAAGCGCTCTTAATGAATTCTTCTTTATTTGTTGAAGGCGAAATCAGGCTAGCTGAAAGTAAGGGAACTAGAATACAGTGAACATTTTGAACTTTCGATATTCCTGTTGTAGCTAAATGGTTTATCGCAACAATGTGGTTTATAGGTTCGATTCTTCTTAAACATTGATCTTGAAGAATCACTGGTGCTCTGAACATAAATTGAAATTCGTATACCTTTCACAACATCACATAGGCTTCAAAAATTGTAGAGATGATTTGTACTTGATACTCTGTAGTTTATTTTCCCAACTCTGAAGTTCTTGTAAAATATCAATTAGGAAGGTGGGAGGGTCGTGGTCAATTGTTGAGATCAACACTTTTTTATGGCTTGGCTATGGAACCTTCTCGATATATTGTTGAAATCACTAGTGGTCTGAACAACACTTGAAACTTGTATGTTTTTCCCCTCAATATATGAATTACAGAAATGAAGAATACATTTGTTTTTGTAGTTTGTAGTTTTCTTTCCCCCAACTCCCCAGTCCTTGTAAATTGTAGAATATCAACTAGGAACAACTCTTTGGCTGTGAACTTACTTTGGTGTATTGTTGAAATCATTAGTAGTGTCAACAATATTTGAAACTTGTTTATCTTTCACATCATTACCTCGGCTACAAAAATGAAGAGTGCAGTAGTTTGTTTTCCCAACTCCCAAGCCCTTGTAAAATATCAACTATCAAGGGTCAAGTTCAATTGTTGAGATCGATATTTTTTTTATGGCTATGGACTTTGGTGCATTGATTTCGTAAATATATTGTTCTTACTTGTAGGTTATAGACATAAAACGTCTAAACAACATGATGAGCGACCATGGCATATACTCGAGAGAAAGATTGTTAATCCCCATTGGCAATCCCAATATACTTATTAACAGTGTATGCTACATCGAGATGGATGCTATCGCCAAGCGGGAAGTTGCGGTGTTGTATTTGGATGGAATCCCCACGACCCATCATTTGTATGGTAAGGTGACATGCGAGCAGGGTATGTCCTCTGTTCAAGTGAAGAAGCGTGTACTTCATTCTTTGAGTCGGAGCATGATGGTTGATGATGAAACCGCTCAATATTACTTATCCATTTCTGATGGTGATCCTCGAGCTGCTCTCACAGAATTCGCTGAGGATATCAGGTGGGAGAGGCATATCGGCATTGCATAG

mRNA sequence

ATGGGATGCTGTTGCGACCAAGACGACGACGTTGAGATCCTGAGGCACCTCAATCCTTCGCCGACCGTTCAATCTCCGCCGCCGGATTCCTCCACCGCCGTACTATCTCCGATGAATTCTCACTTCTTAGCTCTCTCCTGCCGCGACATCCTCCGCCTCATCTTCGAGAAGCTTTCCATTCCCGACTTGGCTCGTTCCAGCTGCGTTTCCCGTCTCTGGCACTCCGTTGCTTCCGATCAGGAGATTGTCGCCGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGACGTGGTCGGCAAGCCAAGCTCCGGGAGCTTCTGGAGAGATAATTGCCTTGGAAAGTTTGCGATCTCCCATCGGATTCTCCGCGGCGATAGCGTGGCTAGTCTTGCCGTTAAGTATTCGGTTCAGGTTATAGACATAAAACGTCTAAACAACATGATGAGCGACCATGGCATATACTCGAGAGAAAGATTGTTAATCCCCATTGGCAATCCCAATATACTTATTAACAGTGTATGCTACATCGAGATGGATGCTATCGCCAAGCGGGAAGTTGCGGTGTTGTATTTGGATGGAATCCCCACGACCCATCATTTGTATGGTAAGGTGACATGCGAGCAGGGTATGTCCTCTGTTCAAGTGAAGAAGCGTGTACTTCATTCTTTGAGTCGGAGCATGATGGTTGATGATGAAACCGCTCAATATTACTTATCCATTTCTGATGGTGATCCTCGAGCTGCTCTCACAGAATTCGCTGAGGATATCAGGTGGGAGAGGCATATCGGCATTGCATAG

Coding sequence (CDS)

ATGGGATGCTGTTGCGACCAAGACGACGACGTTGAGATCCTGAGGCACCTCAATCCTTCGCCGACCGTTCAATCTCCGCCGCCGGATTCCTCCACCGCCGTACTATCTCCGATGAATTCTCACTTCTTAGCTCTCTCCTGCCGCGACATCCTCCGCCTCATCTTCGAGAAGCTTTCCATTCCCGACTTGGCTCGTTCCAGCTGCGTTTCCCGTCTCTGGCACTCCGTTGCTTCCGATCAGGAGATTGTCGCCGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGACGTGGTCGGCAAGCCAAGCTCCGGGAGCTTCTGGAGAGATAATTGCCTTGGAAAGTTTGCGATCTCCCATCGGATTCTCCGCGGCGATAGCGTGGCTAGTCTTGCCGTTAAGTATTCGGTTCAGGTTATAGACATAAAACGTCTAAACAACATGATGAGCGACCATGGCATATACTCGAGAGAAAGATTGTTAATCCCCATTGGCAATCCCAATATACTTATTAACAGTGTATGCTACATCGAGATGGATGCTATCGCCAAGCGGGAAGTTGCGGTGTTGTATTTGGATGGAATCCCCACGACCCATCATTTGTATGGTAAGGTGACATGCGAGCAGGGTATGTCCTCTGTTCAAGTGAAGAAGCGTGTACTTCATTCTTTGAGTCGGAGCATGATGGTTGATGATGAAACCGCTCAATATTACTTATCCATTTCTGATGGTGATCCTCGAGCTGCTCTCACAGAATTCGCTGAGGATATCAGGTGGGAGAGGCATATCGGCATTGCATAG

Protein sequence

MGCCCDQDDDVEILRHLNPSPTVQSPPPDSSTAVLSPMNSHFLALSCRDILRLIFEKLSIPDLARSSCVSRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKFAISHRILRGDSVASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSVCYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVKKRVLHSLSRSMMVDDETAQYYLSISDGDPRAALTEFAEDIRWERHIGIA

Homology

[Close]

BLAST of Lag0006603 vs. NCBI nr
Match: XP_022937590.1 (F-box protein At1g55000 [Cucurbita moschata])

HSP 1 Score: 507.3 bits (1305), Expect = 8.0e-140
Identity = 250/270 (92.59%), Postives = 260/270 (96.30%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPSPTVQSPP------PDSSTAVLSPMNSHFLALSCRDILRLI 60
           MGCCCD+DDDVEILRHL+PSPTVQSPP      PDSSTAVLSPMNSHF ALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPDSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FEKLSIPDLARSSCVSRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKF 120
           FEKLSIPDLARSSCVSRLW+SVASDQEIV+GAFKAPWKVKDV+GKPSSGSFWRDNCLGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSVASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSVCY 180
           AISHRILRGDS+ASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINS+CY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240
           IEMDAIAKREVA LYLDGIPTTHHLYGK T +QGMSSVQVKKRVLHSLSRSMMVDDETAQ
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGKETNDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISDGDPRAALTEFAEDIRWERHIGIA 265
           YYLSISDGDPRAALTEFAEDIRWERH+G+A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]

BLAST of Lag0006603 vs. NCBI nr
Match: KAG6586259.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021103.1 F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 506.1 bits (1302), Expect = 1.8e-139
Identity = 249/270 (92.22%), Postives = 260/270 (96.30%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPSPTVQSPP------PDSSTAVLSPMNSHFLALSCRDILRLI 60
           MGCCCD+DDDVEILRHL+PSPTVQSPP      PDSSTAVLSPMNSHF ALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPDSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FEKLSIPDLARSSCVSRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKF 120
           FEKLSIPDLARSSCVSRLW+SVASDQEIV+GAFKAPWKVKDV+GKPSSGSFWRDNCLGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSVASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSVCY 180
           AISHRILRGDS+ASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINS+CY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240
           IEMDAIAKREVA LYLDGIPTTHHLYG+ T +QGMSSVQVKKRVLHSLSRSMMVDDETAQ
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGRETNDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISDGDPRAALTEFAEDIRWERHIGIA 265
           YYLSISDGDPRAALTEFAEDIRWERH+G+A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]

BLAST of Lag0006603 vs. NCBI nr
Match: XP_022965884.1 (F-box protein At1g55000 [Cucurbita maxima])

HSP 1 Score: 503.8 bits (1296), Expect = 8.8e-139
Identity = 248/270 (91.85%), Postives = 259/270 (95.93%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPSPTVQSPP------PDSSTAVLSPMNSHFLALSCRDILRLI 60
           MGCCCD+DDDVEILRHL+PSPTVQSPP      P SSTAVLSPMNSHF ALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPGSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FEKLSIPDLARSSCVSRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKF 120
           FEKLSIPDLARSSCVSRLW+SVASDQEIV+GAFKAPWKVKDV+GKPSSGSFWRDNCLGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSVASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSVCY 180
           AISHRILRGDS+ASLAVKYSVQVIDIKRLNNMMSDHGIYSRER+LIPIGNPNILINS+CY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERMLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240
           IEMDAIAKREVA LYLDGIPTTHHLYGK T +QGMSSVQVKKRVLHSLSRSMMVDDETAQ
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGKETDDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISDGDPRAALTEFAEDIRWERHIGIA 265
           YYLSISDGDPRAALTEFAEDIRWERH+G+A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]

BLAST of Lag0006603 vs. NCBI nr
Match: XP_023537183.1 (F-box protein At1g55000 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 503.8 bits (1296), Expect = 8.8e-139
Identity = 249/274 (90.88%), Postives = 259/274 (94.53%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPSPTVQSPP----------PDSSTAVLSPMNSHFLALSCRDI 60
           MGCCCD+DDDVEILRHL+PSPTVQSPP          PDSSTAVLSPMNSHF ALSCRDI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQLQQQPTLPDSSTAVLSPMNSHFFALSCRDI 60

Query: 61  LRLIFEKLSIPDLARSSCVSRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSSGSFWRDNC 120
           LRLIFEKLSIPDLARSSCVSRLW+SVASDQEIV+GAFKAPWKVKDV+GKPSSGSFWRDNC
Sbjct: 61  LRLIFEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNC 120

Query: 121 LGKFAISHRILRGDSVASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILIN 180
           LGKFAISHRILRGDS+ASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILIN
Sbjct: 121 LGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILIN 180

Query: 181 SVCYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVKKRVLHSLSRSMMVDD 240
           S+CYIEMDAIAKREVA LYLDGIPTTHHLYGK T + GMSSVQVKKRVLHSLSRSMMVDD
Sbjct: 181 SICYIEMDAIAKREVATLYLDGIPTTHHLYGKETDDHGMSSVQVKKRVLHSLSRSMMVDD 240

Query: 241 ETAQYYLSISDGDPRAALTEFAEDIRWERHIGIA 265
           ETAQYYLSISDGDPRAALTEFAEDIRWERH+G+A
Sbjct: 241 ETAQYYLSISDGDPRAALTEFAEDIRWERHMGMA 274

[Close]

BLAST of Lag0006603 vs. NCBI nr
Match: XP_038877035.1 (F-box protein At1g55000 [Benincasa hispida])

HSP 1 Score: 494.6 bits (1272), Expect = 5.4e-136
Identity = 245/269 (91.08%), Postives = 252/269 (93.68%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPSPTVQS-----PPPDSSTAVLSPMNSHFLALSCRDILRLIF 60
           MGCCCDQDDDVEILRHLNPSP VQS     PP DSS  VLSPMNSHFLALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPPVQSLPPEPPPEDSSAVVLSPMNSHFLALSCRDILRLIF 60

Query: 61  EKLSIPDLARSSCVSRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKFA 120
           E LSIPDLARSSCVSRLWHSVASDQEIV+GAFKAPWKVKDVVGKPSS SFWRDNCLGKFA
Sbjct: 61  ENLSIPDLARSSCVSRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSVASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSVCYI 180
           ISHRILRGDS+ASLAVKYSVQV DIKRLNNM+SDHGIYSRERLLIPIGNPNILINS+CYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMISDHGIYSRERLLIPIGNPNILINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVKKRVLHSLSRSMMVDDETAQY 240
           EMDAIAKREVAVLYLDGIP THHLYGK TCE+GMSSVQV KRVLH LSRSMMVDDETAQY
Sbjct: 181 EMDAIAKREVAVLYLDGIPITHHLYGKETCERGMSSVQVNKRVLHLLSRSMMVDDETAQY 240

Query: 241 YLSISDGDPRAALTEFAEDIRWERHIGIA 265
           YLSIS+GDPRAALTEFAEDIRWERH+ IA
Sbjct: 241 YLSISNGDPRAALTEFAEDIRWERHLSIA 269

[Close]

BLAST of Lag0006603 vs. ExPASy Swiss-Prot
Match: Q9FZ32 (F-box protein At1g55000 OS=Arabidopsis thaliana OX=3702 GN=At1g55000 PE=1 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.9e-76
Identity = 137/221 (61.99%), Postives = 176/221 (79.64%), Query Frame = 0


Query: 43  LALSCRDILRLIFEKLSIPDLARSSCVSRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSS 102
           +AL CRD L +IF+KL++ DLAR+SCV ++W+SVA++ ++V  AF APW++K++VG+P+S
Sbjct: 1   MALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPAS 60

Query: 103 GSFWRDNCLGKFAISHRILRGDSVASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPI 162
            SFWRDN + KFAISHRI RGDSV SLAVKY+VQV+DIKRLNNMMSDHGIYSR+RLLIPI
Sbjct: 61  VSFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPI 120

Query: 163 GNPNILINSVCYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVKKRVLHSL 222
            NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S   K+R++ SL
Sbjct: 121 SNPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESL 180

Query: 223 SRSMMVDDETAQYYLSISDGDPRAALTEFAEDIRWERHIGI 264
            RSM VDD TA YYL+I++GDPR+AL+EF+ D+RWER  G+
Sbjct: 181 RRSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

[Close]

BLAST of Lag0006603 vs. ExPASy TrEMBL
Match: A0A6J1FH66 (F-box protein At1g55000 OS=Cucurbita moschata OX=3662 GN=LOC111443952 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 3.9e-140
Identity = 250/270 (92.59%), Postives = 260/270 (96.30%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPSPTVQSPP------PDSSTAVLSPMNSHFLALSCRDILRLI 60
           MGCCCD+DDDVEILRHL+PSPTVQSPP      PDSSTAVLSPMNSHF ALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPDSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FEKLSIPDLARSSCVSRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKF 120
           FEKLSIPDLARSSCVSRLW+SVASDQEIV+GAFKAPWKVKDV+GKPSSGSFWRDNCLGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSVASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSVCY 180
           AISHRILRGDS+ASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINS+CY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240
           IEMDAIAKREVA LYLDGIPTTHHLYGK T +QGMSSVQVKKRVLHSLSRSMMVDDETAQ
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGKETNDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISDGDPRAALTEFAEDIRWERHIGIA 265
           YYLSISDGDPRAALTEFAEDIRWERH+G+A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]

BLAST of Lag0006603 vs. ExPASy TrEMBL
Match: A0A6J1HS58 (F-box protein At1g55000 OS=Cucurbita maxima OX=3661 GN=LOC111465634 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 4.3e-139
Identity = 248/270 (91.85%), Postives = 259/270 (95.93%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPSPTVQSPP------PDSSTAVLSPMNSHFLALSCRDILRLI 60
           MGCCCD+DDDVEILRHL+PSPTVQSPP      P SSTAVLSPMNSHF ALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPGSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FEKLSIPDLARSSCVSRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKF 120
           FEKLSIPDLARSSCVSRLW+SVASDQEIV+GAFKAPWKVKDV+GKPSSGSFWRDNCLGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSVASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSVCY 180
           AISHRILRGDS+ASLAVKYSVQVIDIKRLNNMMSDHGIYSRER+LIPIGNPNILINS+CY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERMLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240
           IEMDAIAKREVA LYLDGIPTTHHLYGK T +QGMSSVQVKKRVLHSLSRSMMVDDETAQ
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGKETDDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISDGDPRAALTEFAEDIRWERHIGIA 265
           YYLSISDGDPRAALTEFAEDIRWERH+G+A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]

BLAST of Lag0006603 vs. ExPASy TrEMBL
Match: A0A6J1D9A3 (F-box protein At1g55000 OS=Momordica charantia OX=3673 GN=LOC111018786 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 7.6e-136
Identity = 245/269 (91.08%), Postives = 254/269 (94.42%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPSPTVQSP---PP--DSSTAVLSPMNSHFLALSCRDILRLIF 60
           MGCCCDQDDDVEILRHLNP+  V SP   PP  DSSTAVLSPMNSHF ALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIF 60

Query: 61  EKLSIPDLARSSCVSRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKFA 120
           EKLSIPDLARSSCV RLW SVASD EIVAGAFKAPWK+KDV+GKPSSGSFWRDNCLGKFA
Sbjct: 61  EKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSVASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSVCYI 180
           ISHRILRGDS+ASLAVKYSVQV+DIKRLNNMMSDHGIYSRERLLIPIGNPNILINS+CYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVKKRVLHSLSRSMMVDDETAQY 240
           EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQV K+VLHSLSRSMMVDDETA+Y
Sbjct: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARY 240

Query: 241 YLSISDGDPRAALTEFAEDIRWERHIGIA 265
           YLSIS GDPRAALTEFAEDIRWERH+ IA
Sbjct: 241 YLSISHGDPRAALTEFAEDIRWERHMSIA 269

[Close]

BLAST of Lag0006603 vs. ExPASy TrEMBL
Match: A0A0A0LFS6 (LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022840 PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 2.4e-134
Identity = 241/269 (89.59%), Postives = 250/269 (92.94%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPSPTVQSPPP-----DSSTAVLSPMNSHFLALSCRDILRLIF 60
           MGCCCDQDDDVEILRHLNPSP + SPPP     D S A+LSPMNSHF ALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIF 60

Query: 61  EKLSIPDLARSSCVSRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKFA 120
           E LSIPDLARSSCV RLWHSVASDQEIV+GAFKAPWKVKDVVGKPSS SFWRDNCLGKFA
Sbjct: 61  ENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSVASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSVCYI 180
           ISHRILRGDS+ASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPN+LINS+CYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVKKRVLHSLSRSMMVDDETAQY 240
           EMDAIAKREVAVLYLDGIP T HLYGKVT EQGMSSVQV KRVLHSLSRSMMVDDETAQY
Sbjct: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240

Query: 241 YLSISDGDPRAALTEFAEDIRWERHIGIA 265
           YLSIS+G+PRAALTEFAEDIRWERH+ IA
Sbjct: 241 YLSISNGNPRAALTEFAEDIRWERHMSIA 269

[Close]

BLAST of Lag0006603 vs. ExPASy TrEMBL
Match: A0A5A7TYE5 (Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00510 PE=3 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 3.3e-107
Identity = 198/218 (90.83%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPSPTV-----QSPPPDSSTAVLSPMNSHFLALSCRDILRLIF 60
           MGCCCDQDDDVEILRHLNPSP V     Q PP D STA+LSPMNSHF ALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPPVHSPPLQPPPADHSTAILSPMNSHFFALSCRDILRLIF 60

Query: 61  EKLSIPDLARSSCVSRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSSGSFWRDNCLGKFA 120
           E LSIPDLARSSCV RLWHSVASDQEIVAGAFKAPWKVKDVVGKPSS SFWRDNCLGKFA
Sbjct: 61  EHLSIPDLARSSCVCRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSVASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSVCYI 180
           ISHRILRGDS+ASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPNILINS+CYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQ 214
           EMDAIAKREVAVLYLDGIP T HLYGKVT EQGMSSVQ
Sbjct: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQ 218

[Close]

BLAST of Lag0006603 vs. TAIR 10
Match: AT1G55000.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 286.6 bits (732), Expect = 2.1e-77
Identity = 137/221 (61.99%), Postives = 176/221 (79.64%), Query Frame = 0


Query: 43  LALSCRDILRLIFEKLSIPDLARSSCVSRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSS 102
           +AL CRD L +IF+KL++ DLAR+SCV ++W+SVA++ ++V  AF APW++K++VG+P+S
Sbjct: 1   MALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPAS 60

Query: 103 GSFWRDNCLGKFAISHRILRGDSVASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPI 162
            SFWRDN + KFAISHRI RGDSV SLAVKY+VQV+DIKRLNNMMSDHGIYSR+RLLIPI
Sbjct: 61  VSFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPI 120

Query: 163 GNPNILINSVCYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVKKRVLHSL 222
            NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S   K+R++ SL
Sbjct: 121 SNPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESL 180

Query: 223 SRSMMVDDETAQYYLSISDGDPRAALTEFAEDIRWERHIGI 264
            RSM VDD TA YYL+I++GDPR+AL+EF+ D+RWER  G+
Sbjct: 181 RRSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

[Close]

BLAST of Lag0006603 vs. TAIR 10
Match: AT1G55000.2 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 286.6 bits (732), Expect = 2.1e-77
Identity = 137/221 (61.99%), Postives = 176/221 (79.64%), Query Frame = 0


Query: 43  LALSCRDILRLIFEKLSIPDLARSSCVSRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSS 102
           +AL CRD L +IF+KL++ DLAR+SCV ++W+SVA++ ++V  AF APW++K++VG+P+S
Sbjct: 1   MALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPAS 60

Query: 103 GSFWRDNCLGKFAISHRILRGDSVASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPI 162
            SFWRDN + KFAISHRI RGDSV SLAVKY+VQV+DIKRLNNMMSDHGIYSR+RLLIPI
Sbjct: 61  VSFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPI 120

Query: 163 GNPNILINSVCYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVKKRVLHSL 222
            NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S   K+R++ SL
Sbjct: 121 SNPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESL 180

Query: 223 SRSMMVDDETAQYYLSISDGDPRAALTEFAEDIRWERHIGI 264
            RSM VDD TA YYL+I++GDPR+AL+EF+ D+RWER  G+
Sbjct: 181 RRSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

[Close]

BLAST of Lag0006603 vs. TAIR 10
Match: AT1G55000.3 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 286.6 bits (732), Expect = 2.1e-77
Identity = 137/221 (61.99%), Postives = 176/221 (79.64%), Query Frame = 0


Query: 43  LALSCRDILRLIFEKLSIPDLARSSCVSRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSS 102
           +AL CRD L +IF+KL++ DLAR+SCV ++W+SVA++ ++V  AF APW++K++VG+P+S
Sbjct: 1   MALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPAS 60

Query: 103 GSFWRDNCLGKFAISHRILRGDSVASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPI 162
            SFWRDN + KFAISHRI RGDSV SLAVKY+VQV+DIKRLNNMMSDHGIYSR+RLLIPI
Sbjct: 61  VSFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPI 120

Query: 163 GNPNILINSVCYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVKKRVLHSL 222
            NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S   K+R++ SL
Sbjct: 121 SNPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESL 180

Query: 223 SRSMMVDDETAQYYLSISDGDPRAALTEFAEDIRWERHIGI 264
            RSM VDD TA YYL+I++GDPR+AL+EF+ D+RWER  G+
Sbjct: 181 RRSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

[Close]

BLAST of Lag0006603 vs. TAIR 10
Match: AT5G08200.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.5e-06
Identity = 25/65 (38.46%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 100 PSSGS--FWRDNCLGKFAISHRILRGDSVASLAVKYSVQVIDIKRLNNMMSDHGIYSRER 159
           PSS S  F   N   +  I HRI + D++A +A+KY V+V D+K++NN+++D  +++ + 
Sbjct: 60  PSSSSPPFHGSNSPDRGYIEHRISKFDTLAGVAIKYGVEVADVKKMNNLVTDLQMFALKS 119

Query: 160 LLIPI 163
           L IP+
Sbjct: 120 LQIPL 124

[Close]

BLAST of Lag0006603 vs. TAIR 10
Match: AT5G23130.1 (Peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.6e-05
Identity = 25/63 (39.68%), Postives = 40/63 (63.49%), Query Frame = 0


Query: 100 PSSGSFWRDNCLGKFAISHRILRGDSVASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLL 159
           PSS S     C G   I HR+ + D++A +A+KY V+V DI +LN +++D  +++ E L 
Sbjct: 60  PSSAS----TCAG--YIEHRVSKFDTLAGIAIKYGVEVADITKLNGLVTDLQMFALESLR 116

Query: 160 IPI 163
           IP+
Sbjct: 120 IPL 116

The following BLAST results are available for this feature:

BLAST of Lag0006603 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937590.1	8.0e-140	92.59	F-box protein At1g55000 [Cucurbita moschata]	[more]
KAG6586259.1	1.8e-139	92.22	F-box protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021103.1 F-b...	[more]
XP_022965884.1	8.8e-139	91.85	F-box protein At1g55000 [Cucurbita maxima]	[more]
XP_023537183.1	8.8e-139	90.88	F-box protein At1g55000 [Cucurbita pepo subsp. pepo]	[more]
XP_038877035.1	5.4e-136	91.08	F-box protein At1g55000 [Benincasa hispida]	[more]

BLAST of Lag0006603 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ32	2.9e-76	61.99	F-box protein At1g55000 OS=Arabidopsis thaliana OX=3702 GN=At1g55000 PE=1 SV=1	[more]

BLAST of Lag0006603 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FH66	3.9e-140	92.59	F-box protein At1g55000 OS=Cucurbita moschata OX=3662 GN=LOC111443952 PE=4 SV=1	[more]
A0A6J1HS58	4.3e-139	91.85	F-box protein At1g55000 OS=Cucurbita maxima OX=3661 GN=LOC111465634 PE=4 SV=1	[more]
A0A6J1D9A3	7.6e-136	91.08	F-box protein At1g55000 OS=Momordica charantia OX=3673 GN=LOC111018786 PE=4 SV=1	[more]
A0A0A0LFS6	2.4e-134	89.59	LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022840 PE=4 S...	[more]
A0A5A7TYE5	3.3e-107	90.83	Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00510 P...	[more]

BLAST of Lag0006603 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55000.1	2.1e-77	61.99	peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.2	2.1e-77	61.99	peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.3	2.1e-77	61.99	peptidoglycan-binding LysM domain-containing protein	[more]
AT5G08200.1	1.5e-06	38.46	peptidoglycan-binding LysM domain-containing protein	[more]
AT5G23130.1	1.6e-05	39.68	Peptidoglycan-binding LysM domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 48..80 e-value: 2.4E-5 score: 24.1
IPR036779	LysM domain superfamily	GENE3D	3.10.350.10	LysM domain	coord: 112..166 e-value: 1.5E-11 score: 45.7
IPR036779	LysM domain superfamily	SUPERFAMILY	54106	LysM domain	coord: 117..161
None	No IPR available	GENE3D	1.20.1280.50		coord: 47..82 e-value: 1.0E-6 score: 30.7
None	No IPR available	PANTHER	PTHR20932:SF8	LD22649P	coord: 1..263
IPR018392	LysM domain	PFAM	PF01476	LysM	coord: 119..161 e-value: 2.3E-5 score: 24.3
IPR018392	LysM domain	PROSITE	PS51782	LYSM	coord: 116..160 score: 10.807057
IPR018392	LysM domain	CDD	cd00118	LysM	coord: 116..160 e-value: 1.76142E-6 score: 42.0873
IPR045030	LysM and putative peptidoglycan-binding domain-containing protein 1-4	PANTHER	PTHR20932	LOC443603 PROTEIN-RELATED	coord: 1..263
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 49..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0006603.1	Lag0006603.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0031408	oxylipin biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function	GO:0005515	protein binding