Lag0006563 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATGGCGACGGATTACAGAGTATTCGATCTAAACGTTACGTGCGCCGAAGGAATCGAAGGAGTTCTAAGTTTCATCGATTTTTTCCACAAATGGAAGGTCTACGCGGTGGTTTCCGTCGTCGGAGCCTCGCCGGACGGCCACCGAGAAACGCCGGTGGCTAAGTACTTCGGTCGAAATCCGGTGTGGAATTTTCCGATGAGGTTTTATTTGGAGGAATCGGAGCTGCGAGAAAATGCCCTAACAGCTCTGAGGATTCAGCTGAAACGAAAGCGAAGTTTTGGAGAAGATGAAGACATTGCCGAAGCTTTAGTTCCGTTGAAGAATCTTTTTCATGGCAATGAGAATGTGACAAATTGCACTTCATCGTTGTTGCTTTCGCCATCAGGCGGCCGTCGTGGTTTCGTGTATTTTTCGTATTATTTTAGCCGGATTCATCGTGCCACCGTCGGATTTTTGGTCGATAGGACATATCAATTATTGTTGAACTATGGTCACTTTTGA ATGGCGATGGCGACGGATTACAGAGTATTCGATCTAAACGTTACGTGCGCCGAAGGAATCGAAGGAGTTCTAAGTTTCATCGATTTTTTCCACAAATGGAAGGTCTACGCGGTGGTTTCCGTCGTCGGAGCCTCGCCGGACGGCCACCGAGAAACGCCGGTGGCTAAGTACTTCGGTCGAAATCCGGTGTGGAATTTTCCGATGAGGTTTTATTTGGAGGAATCGGAGCTGCGAGAAAATGCCCTAACAGCTCTGAGGATTCAGCTGAAACGAAAGCGAAGTTTTGGAGAAGATGAAGACATTGCCGAAGCTTTAGTTCCGTTGAAGAATCTTTTTCATGGCAATGAGAATGTGACAAATTGCACTTCATCGTTGTTGCTTTCGCCATCAGGCGGCCGTCGTGGTTTCGTGTATTTTTCGTATTATTTTAGCCGGATTCATCGTGCCACCGTCGGATTTTTGGTCGATAGGACATATCAATTATTGTTGAACTATGGTCACTTTTGA ATGGCGATGGCGACGGATTACAGAGTATTCGATCTAAACGTTACGTGCGCCGAAGGAATCGAAGGAGTTCTAAGTTTCATCGATTTTTTCCACAAATGGAAGGTCTACGCGGTGGTTTCCGTCGTCGGAGCCTCGCCGGACGGCCACCGAGAAACGCCGGTGGCTAAGTACTTCGGTCGAAATCCGGTGTGGAATTTTCCGATGAGGTTTTATTTGGAGGAATCGGAGCTGCGAGAAAATGCCCTAACAGCTCTGAGGATTCAGCTGAAACGAAAGCGAAGTTTTGGAGAAGATGAAGACATTGCCGAAGCTTTAGTTCCGTTGAAGAATCTTTTTCATGGCAATGAGAATGTGACAAATTGCACTTCATCGTTGTTGCTTTCGCCATCAGGCGGCCGTCGTGGTTTCGTGTATTTTTCGTATTATTTTAGCCGGATTCATCGTGCCACCGTCGGATTTTTGGTCGATAGGACATATCAATTATTGTTGAACTATGGTCACTTTTGA MAMATDYRVFDLNVTCAEGIEGVLSFIDFFHKWKVYAVVSVVGASPDGHRETPVAKYFGRNPVWNFPMRFYLEESELRENALTALRIQLKRKRSFGEDEDIAEALVPLKNLFHGNENVTNCTSSLLLSPSGGRRGFVYFSYYFSRIHRATVGFLVDRTYQLLLNYGHF Homology
BLAST of Lag0006563 vs. NCBI nr
Match: XP_022938307.1 (protein SRC2 [Cucurbita moschata] >KAG7021095.1 Protein SRC2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 208.0 bits (528), Expect = 6.4e-50 Identity = 107/147 (72.79%), Postives = 122/147 (82.99%), Query Frame = 0
BLAST of Lag0006563 vs. NCBI nr
Match: KAG6586252.1 (Protein SRC2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 208.0 bits (528), Expect = 6.4e-50 Identity = 107/147 (72.79%), Postives = 122/147 (82.99%), Query Frame = 0
BLAST of Lag0006563 vs. NCBI nr
Match: XP_031736682.1 (protein SRC2 homolog [Cucumis sativus] >KGN60949.1 hypothetical protein Csa_021167 [Cucumis sativus]) HSP 1 Score: 196.1 bits (497), Expect = 2.5e-46 Identity = 102/151 (67.55%), Postives = 124/151 (82.12%), Query Frame = 0
BLAST of Lag0006563 vs. NCBI nr
Match: XP_022150754.1 (protein SRC2 [Momordica charantia]) HSP 1 Score: 178.3 bits (451), Expect = 5.4e-41 Identity = 95/153 (62.09%), Postives = 115/153 (75.16%), Query Frame = 0
BLAST of Lag0006563 vs. NCBI nr
Match: KAA0048022.1 (protein SRC2-like [Cucumis melo var. makuwa]) HSP 1 Score: 110.5 bits (275), Expect = 1.4e-20 Identity = 58/87 (66.67%), Postives = 70/87 (80.46%), Query Frame = 0
BLAST of Lag0006563 vs. ExPASy Swiss-Prot
Match: O04133 (Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.7e-11 Identity = 52/145 (35.86%), Postives = 75/145 (51.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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