Lag0006365 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0006365
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	CASP-like protein
Location	chr6: 41648211 .. 41651097 (+)
RNA-Seq Expression	Lag0006365
Synteny	Lag0006365

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTTTTGGGATCTAAGAACTGAAGGGCTCCTCAGATTCTCTGCGATTATTGCCTTGCTTTTGACAGTTCTTCTGCTCGCTTTTGATAAGCAAACTACCCAAATCTTTCATGTTGACAAGAAAGCCTCTTTCAGAAGTTTGCGCGCTCTCATGTAAGCTCCCGTCCCCTCTCTCTCTCTCGAGTTTTTCTTTTCGAAGTTTTGAATAGGGAGATTCGAACATTTAACCTTAAATATGTAGATTAGTTGAGTCAGAATTTTCAAACGCTAGGGAAAGATTCATTTTAGGTTTTAAAAAAAATTGAAGTATTATTTCTAATTTGATTTGATCTCTTTAAAATTTATGATTGAATTATATATAGTTCAATTGAATATTTGATTTTTAGGATAGATGTATGTTGGACTCAGTTGACCTAGGTTTAAGTTAGTGATTTTTAAATATATATACATATTTATCATTATTACTTTTTTTTTTTTCAATTTTTTTACTCTTCTTTTGGTGACAGAGTAATTATGTATGTGGACTCTATGGCAGCTGCCTACAACATTCTTCAACTCTGCAAATGTTGGATTTCAACTCAGCCAAAAGGAGCCTCCAAATTAGGGGCTGACTTTAATATATACCTATTTTGGATTTCTTTCTTTCTTGACCAGGTATGTCCTAATTTCTCTTTATACATTACCTTTTCCCTTACATTAGATTGAGAAATCTGATTTAAATTATGTAACGACATATTTGGAAGTGATTTTAGAATTCACTCTCAAACATGATAAAAGTGATTTTTGGTCATTCTAAAATCACTCCCAAACACATCTCCTAACTCCTAAATGAATTGAATTTTTTGATATTTCAATATGCATAACCTTTATTTGGTTAAAAAAATAATATTCAATCATCGATTAACTCAATAATAATAATTTGTCCAGTTTTAACTTTTAACTGTGTTATTTGATGAGTCATGTATTGGCTTAGATATTGATTAGGAGGATTATTATAGCCACCACTAGTTGACTCGTGTGTTATACTTTATAAATAAATAAATAAATATATACCGTTGTTAATTATTATTTTGATATTTATGTTGAGTCATTTTATTTATACCAAAATAAAAATTAAAAAAATTAAAAAAAGAATAAAAAAAATTAAGAAAAATAAAGCTTTTTTTTTTCTTTTTTGTGAAAAAGAACAAAATAATGCTTCTAATAGGGAGTAAATGGAGTTGCCCAACCTGTGGTTATGGAGGAAAAGGACACTGACAAGTGCACCATCACAAGAAACCAGCTCATGTAATTGCCCAAAAATTCCCAAAGTTCTAGGTTAGGTTTAGAGATTATTATTATTATTTTTTAATAATGGTTTAGAGATTTTTTAGAACAAAATCCAAAATAAAATTATAAATTTGTGGCAAAATATATATGTTTTAGTCGATTTCTTTTTGTTTCATTTATTTAAAATTTTCAATATCTTCCTTTATATTTTAATATTTTCACTTATAGAAAGGATTATACGTAGTCTATTGATATTTTATCAGTGTCTATCACTGATAGTCACTAATAGCAATGATAGACACTAATAGAAGGATTATACCGAGTTTATTAGAGCATGATAGTCTATTAGTGGCTATCACCGACAATCACTAATAGAAAGAAATATACGAAAATTGGTAGAAATTGTGCACAATTCAAAATTAAATAGGAATAAAACGGAAATTATGAAATTTTATTATAATAAATTCTCATATTTTCTATTATTTTTACATTGTGTTATATTTGAATTTTTTTTAAAAAAAAACCCTAATTCCCACCTCATGCAATTTCCCCATATTTTTTTTCTCAATTAAATTATATATTTTTAAATACTTGAACTTAGGTTTTTTTTAAGAAAAAAAAAATAAATAATAGGAGAGGAAGTTAGCATATCATACGTGATTTTGTTATTTATTTATTTTTATTTTTTAAATCACGCTCATTTACTTGGACCCAATTTGATAATCAATTTGATTTTTGGTTTTTAAAAATTAATCATATAAACACTATTTCTACCTAAAGTTTCTTTGTCTTATTATTTACCTTCTTAATGTGTTTTAAAAAATTAAGTCAATTTTTGAAGACTTAAAAAAGTAGTTTTAAAAAACTTGTTTTTGTTTTTGGAATTTTGTCAATAATTGTCTTTGACAAAGATAAAAATCATTGTAAGGAAATTTAGTGAAAACAAGCATAATTTAAAAAATCAAATAGTTATTAACGAGACCTAAATAGTTATCAAAATTGACTTTATTTATTAACATTTTTCTCTAAGTAACCCTTTTCAAAAATTACGAAATTCTAAAATTAAAGTAGAACGTTTTCAAAATTGGAACAAAAAAAAAGTACTAGTATAAGAATTTTTCTATCATAATTAAAAAATCGCCATTAACCAACGTAGAAAAATAAAGAAAATATTTTACCAACTAGCTTAACTAATTAAGACATAAATCACCTCAAAAGAAAAAGTCAAAAGTTTAAATCCGAAAAAAACTTATCTATTGGTCCCAAAAATGTTTAATGTGTGTCAATTTCCTCCAAGTTGGGGAAGTGTCATAAATTTAGTTTGGCATTAAAGTAGTTTGAACTTGCACTGGCATTGACAGGCAGCTGCGTACCTCATATTTGCGGCGAACACGGCGGGGATGGAGGCGGCGTTTCTGGCGGTGACCGGCGCATACGACTTTCAATGGATGAAGCTCTGCAACAGATTCCACAGATTTTGCTACCAAGTTGGCGGAGCTTTCCTTTGTGGCTATGCAGCTTTCTTTGCAATGCTTGTCATTTCCTTCATTTCTGCTTTCAATTTGTTTAGGCATTACTCTCCAAACCACTTCTTGCGACTCAAATCCTACAAGTGA

mRNA sequence

ATGGGGTTTTGGGATCTAAGAACTGAAGGGCTCCTCAGATTCTCTGCGATTATTGCCTTGCTTTTGACAGTTCTTCTGCTCGCTTTTGATAAGCAAACTACCCAAATCTTTCATGTTGACAAGAAAGCCTCTTTCAGAAGTTTGCGCGCTCTCATAGTAATTATGTATGTGGACTCTATGGCAGCTGCCTACAACATTCTTCAACTCTGCAAATGTTGGATTTCAACTCAGCCAAAAGGAGCCTCCAAATTAGGGGCTGACTTTAATATATACCTATTTTGGATTTCTTTCTTTCTTGACCAGGCAGCTGCGTACCTCATATTTGCGGCGAACACGGCGGGGATGGAGGCGGCGTTTCTGGCGGTGACCGGCGCATACGACTTTCAATGGATGAAGCTCTGCAACAGATTCCACAGATTTTGCTACCAAGTTGGCGGAGCTTTCCTTTGTGGCTATGCAGCTTTCTTTGCAATGCTTGTCATTTCCTTCATTTCTGCTTTCAATTTGTTTAGGCATTACTCTCCAAACCACTTCTTGCGACTCAAATCCTACAAGTGA

Coding sequence (CDS)

ATGGGGTTTTGGGATCTAAGAACTGAAGGGCTCCTCAGATTCTCTGCGATTATTGCCTTGCTTTTGACAGTTCTTCTGCTCGCTTTTGATAAGCAAACTACCCAAATCTTTCATGTTGACAAGAAAGCCTCTTTCAGAAGTTTGCGCGCTCTCATAGTAATTATGTATGTGGACTCTATGGCAGCTGCCTACAACATTCTTCAACTCTGCAAATGTTGGATTTCAACTCAGCCAAAAGGAGCCTCCAAATTAGGGGCTGACTTTAATATATACCTATTTTGGATTTCTTTCTTTCTTGACCAGGCAGCTGCGTACCTCATATTTGCGGCGAACACGGCGGGGATGGAGGCGGCGTTTCTGGCGGTGACCGGCGCATACGACTTTCAATGGATGAAGCTCTGCAACAGATTCCACAGATTTTGCTACCAAGTTGGCGGAGCTTTCCTTTGTGGCTATGCAGCTTTCTTTGCAATGCTTGTCATTTCCTTCATTTCTGCTTTCAATTTGTTTAGGCATTACTCTCCAAACCACTTCTTGCGACTCAAATCCTACAAGTGA

Protein sequence

MGFWDLRTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSMAAAYNILQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQAAAYLIFAANTAGMEAAFLAVTGAYDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFAMLVISFISAFNLFRHYSPNHFLRLKSYK

Homology

[Close]

BLAST of Lag0006365 vs. NCBI nr
Match: XP_004149074.1 (CASP-like protein 2C1 [Cucumis sativus] >KGN61092.1 hypothetical protein Csa_021217 [Cucumis sativus])

HSP 1 Score: 315.8 bits (808), Expect = 2.4e-82
Identity = 153/183 (83.61%), Postives = 169/183 (92.35%), Query Frame = 0


Query: 1   MGFWDLRTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSM 60
           MGF D++TEG+LRF AII L+L+VLLL FDK+T QIFHVDKKASF+SLRAL++I+YVDSM
Sbjct: 1   MGFGDVKTEGILRFCAIILLVLSVLLLGFDKETVQIFHVDKKASFKSLRALVIIIYVDSM 60

Query: 61  AAAYNILQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQAAAYLIFAANTAGMEAAFL 120
           AA YNILQLCKCWI  QPKG SKLG  F+IYLFW+SFFLDQ AAYL FA+NTAGMEAA L
Sbjct: 61  AAGYNILQLCKCWIFAQPKGISKLGTHFHIYLFWLSFFLDQVAAYLTFASNTAGMEAALL 120

Query: 121 AVTGAYDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFAMLVISFISAFNLFRHYSPNHFLR 180
           AVTGA+DFQWMKLCNRFHRFCYQVGGAFLCGYAAFFA+L+ISFISAFNLFRHYSPNHFLR
Sbjct: 121 AVTGAHDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFALLLISFISAFNLFRHYSPNHFLR 180

Query: 181 LKS 184
           LKS
Sbjct: 181 LKS 183

[Close]

BLAST of Lag0006365 vs. NCBI nr
Match: XP_038889630.1 (CASP-like protein 2C1 [Benincasa hispida])

HSP 1 Score: 308.5 bits (789), Expect = 3.8e-80
Identity = 150/183 (81.97%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MGFWDLRTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSM 60
           MGF ++RTEG+LRF AI  L+L+V LL FDKQTTQIFH+DKKASFRSLRAL++I+YVDSM
Sbjct: 1   MGFGNVRTEGILRFCAIFLLVLSVCLLGFDKQTTQIFHIDKKASFRSLRALVIIIYVDSM 60

Query: 61  AAAYNILQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQAAAYLIFAANTAGMEAAFL 120
            A YNILQ+CKCWI  QPKG SKLG  F+IYLFW+SFFLDQAA YL FAANTAGMEA+FL
Sbjct: 61  VAGYNILQICKCWIFAQPKGISKLGGHFDIYLFWLSFFLDQAAVYLTFAANTAGMEASFL 120

Query: 121 AVTGAYDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFAMLVISFISAFNLFRHYSPNHFLR 180
           AVTGA DFQWMKLCNRFHRFCYQVGGAFLCGYAAF  +LVISFISAF+LFRHYSPNHFLR
Sbjct: 121 AVTGARDFQWMKLCNRFHRFCYQVGGAFLCGYAAFSTLLVISFISAFSLFRHYSPNHFLR 180

Query: 181 LKS 184
           LKS
Sbjct: 181 LKS 183

[Close]

BLAST of Lag0006365 vs. NCBI nr
Match: XP_023537147.1 (CASP-like protein 2C1 [Cucurbita pepo subsp. pepo] >KAG6586191.1 CASP-like protein 2C1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021022.1 CASP-like protein 2C1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 299.7 bits (766), Expect = 1.8e-77
Identity = 148/183 (80.87%), Postives = 159/183 (86.89%), Query Frame = 0


Query: 1   MGFWDLRTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSM 60
           MGFWD RTEG+LR  AII L+LTVLLL FDKQTTQIFH+DKKASFRSL A +VIMYVDS+
Sbjct: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  AAAYNILQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQAAAYLIFAANTAGMEAAFL 120
           AAAYNILQ+CKCWIS QPKG SKLG+  +I LFW SF LDQA AYL+FAANTAGMEAA L
Sbjct: 61  AAAYNILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120

Query: 121 AVTGAYDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFAMLVISFISAFNLFRHYSPNHFLR 180
           AVTGA+DFQWMKLCNRF RFCYQVGGAFLCGY AFFAM  I  IS+FNLFRHYSPN F R
Sbjct: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFR 180

Query: 181 LKS 184
           LKS
Sbjct: 181 LKS 183

[Close]

BLAST of Lag0006365 vs. NCBI nr
Match: XP_022938059.1 (CASP-like protein 2C1 [Cucurbita moschata])

HSP 1 Score: 297.7 bits (761), Expect = 6.7e-77
Identity = 147/183 (80.33%), Postives = 158/183 (86.34%), Query Frame = 0


Query: 1   MGFWDLRTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSM 60
           MGFWD RTEG+LR  AII L+LTVLLL FDKQTTQIFH+DKKASFRSL A +VIMYVDS+
Sbjct: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  AAAYNILQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQAAAYLIFAANTAGMEAAFL 120
           AAAYNILQ+CKCWIS  PKG SKLG+  +I LFW SF LDQA AYL+FAANTAGMEAA L
Sbjct: 61  AAAYNILQICKCWISAHPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120

Query: 121 AVTGAYDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFAMLVISFISAFNLFRHYSPNHFLR 180
           AVTGA+DFQWMKLCNRF RFCYQVGGAFLCGY AFFAM  I  IS+FNLFRHYSPN F R
Sbjct: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFR 180

Query: 181 LKS 184
           LKS
Sbjct: 181 LKS 183

[Close]

BLAST of Lag0006365 vs. NCBI nr
Match: XP_022965970.1 (CASP-like protein 2C1 [Cucurbita maxima])

HSP 1 Score: 294.3 bits (752), Expect = 7.5e-76
Identity = 145/183 (79.23%), Postives = 157/183 (85.79%), Query Frame = 0


Query: 1   MGFWDLRTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSM 60
           MGFWD +TEG+LR  AII L+LTVLLL FDKQTTQIFH+DKKASFRSL A +VIMYVDS+
Sbjct: 1   MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  AAAYNILQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQAAAYLIFAANTAGMEAAFL 120
           AAAYNILQ+C CWIS QPKG SKLG+  +I LFW SF LDQA AYL+FAANTAGMEAA L
Sbjct: 61  AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120

Query: 121 AVTGAYDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFAMLVISFISAFNLFRHYSPNHFLR 180
           AVTGA+DFQWMKLCNRF RFCYQVGGAFLCGY AFFAM  I  IS+FNLFRHY PN F R
Sbjct: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFR 180

Query: 181 LKS 184
           LKS
Sbjct: 181 LKS 183

[Close]

BLAST of Lag0006365 vs. ExPASy Swiss-Prot
Match: B9IM09 (CASP-like protein 2C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_578614 PE=3 SV=2)

HSP 1 Score: 176.4 bits (446), Expect = 3.0e-43
Identity = 92/176 (52.27%), Postives = 121/176 (68.75%), Query Frame = 0


Query: 7   RTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSMAAAYNI 66
           + E +LR  AI+ L+ T  L+  D QT  +   +K+ +++ L AL+V++YVD++AAAYN+
Sbjct: 7   KIEAILRGIAILLLVSTACLVGLDSQTKFVIVYEKEVTYKDLHALVVLVYVDAVAAAYNL 66

Query: 67  LQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQAAAYLIFAANTAGMEAAFLAVTGAY 126
           LQLC+C +S   KG  K       YL W  F LDQ AAY  FAA++A ++ + L +TGA 
Sbjct: 67  LQLCRCSVSALSKGNFK---GSYRYLSWACFVLDQLAAYTTFAAHSAALQHSVLGITGAK 126

Query: 127 DFQWMKLCNRFHRFCYQVGGAFLCGYAAFFAMLVISFISAFNLFRHYSPNHFLRLK 183
            FQWMK CNRF RFC+Q+GGA  CGY A   M++ISFISAFNLFR YSP HFLRLK
Sbjct: 127 VFQWMKWCNRFTRFCFQIGGALTCGYIASVLMVMISFISAFNLFRLYSPKHFLRLK 179

[Close]

BLAST of Lag0006365 vs. ExPASy Swiss-Prot
Match: Q5K4H9 (CASP-like protein XL3 OS=Gossypium hirsutum OX=3635 GN=XL3 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.3e-42
Identity = 88/176 (50.00%), Postives = 116/176 (65.91%), Query Frame = 0


Query: 7   RTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSMAAAYNI 66
           + E L+R S I+ L+LT  L+  D QT  IF+V KKASF+ LRAL+ ++Y+ S+AAAYN+
Sbjct: 7   KIEALIRLSTIVMLVLTACLIGLDSQTKVIFYVQKKASFKDLRALVGLLYITSLAAAYNL 66

Query: 67  LQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQAAAYLIFAANTAGMEAAFLAVTGAY 126
           LQLC    S   KG S        YL W+ + LDQA  Y +FA N A +E +FL +TG  
Sbjct: 67  LQLCCSSFSASYKGTS---LQSYAYLAWLRYILDQAVVYAVFAGNLAALEHSFLVLTGEE 126

Query: 127 DFQWMKLCNRFHRFCYQVGGAFLCGYAAFFAMLVISFISAFNLFRHYSPNHFLRLK 183
           +FQW+K CN++ RFC Q+GG+ LCG+ A   M  I+ ISAFNLFR YSP  F+ LK
Sbjct: 127 NFQWLKWCNKYTRFCTQIGGSLLCGFVASLLMFSIASISAFNLFRQYSPTKFMHLK 179

[Close]

BLAST of Lag0006365 vs. ExPASy Swiss-Prot
Match: A7Q6G6 (CASP-like protein 2C1 OS=Vitis vinifera OX=29760 GN=VIT_11s0052g01140 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-39
Identity = 94/177 (53.11%), Postives = 120/177 (67.80%), Query Frame = 0


Query: 7   RTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKK-ASFRSLRALIVIMYVDSMAAAYN 66
           R E  LR  AI+ L+LT  LL FD QT  +F   KK A+FR L AL V++YVDS+AA YN
Sbjct: 30  RAEAFLRLFAILVLVLTACLLGFDTQTKLLFSTIKKTATFRDLGALQVVVYVDSVAAGYN 89

Query: 67  ILQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQAAAYLIFAANTAGMEAAFLAVTGA 126
           +LQL + +IS + KG  KL     + L W+ F LDQAA Y +F+ANTA ++A+ +AVTG 
Sbjct: 90  LLQLGRGFISAKLKG--KLINVSYVTLPWVCFLLDQAAVYTVFSANTAALQASIIAVTGE 149

Query: 127 YDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFAMLVISFISAFNLFRHYSPNHFLRLK 183
              QWMK+CNR+ RFC QVGGA L GY A   M+++S +SAF+LFR YSP  F  LK
Sbjct: 150 SSLQWMKVCNRYTRFCIQVGGALLSGYLASLLMVLLSSLSAFSLFRLYSPKQFHLLK 204

[Close]

BLAST of Lag0006365 vs. ExPASy Swiss-Prot
Match: C6SZ04 (CASP-like protein 2C1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.4e-38
Identity = 90/180 (50.00%), Postives = 119/180 (66.11%), Query Frame = 0


Query: 7   RTEGLLRFSAIIALLLTVLLLAFDKQTTQIF-HVDKKASFRSLRALIVIMYVDSMAAAYN 66
           R E  LR SAI+ L+LT  L+A D QT  +F  ++KKA+++ L AL +++YV   AA YN
Sbjct: 7   RGEVCLRVSAILVLVLTACLVALDTQTKVVFVSIEKKATYKDLNALKILVYVTCAAAGYN 66

Query: 67  ILQLCK--CWISTQPKGASKLGADFNIYLFWISFFLDQAAAYLIFAANTAGMEAAFLAVT 126
           +L LCK   W     KG+        + + WI F LDQ A Y+ FAANTA M AA LA++
Sbjct: 67  LLLLCKHSIWSRKNFKGS-------YLCMAWICFSLDQIAVYMTFAANTATMGAAVLAIS 126

Query: 127 GAYDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFAMLVISFISAFNLFRHYSPNHFLRLKS 184
           G+  FQW+K+C++F RFC ++GGA LCGYAA   M +IS ISA+ +FR YSP  FLRLKS
Sbjct: 127 GSEAFQWLKVCDKFTRFCVEIGGALLCGYAASMLMALISTISAYKVFRMYSPKWFLRLKS 179

[Close]

BLAST of Lag0006365 vs. ExPASy Swiss-Prot
Match: Q8L8U9 (CASP-like protein 2C1 OS=Arabidopsis thaliana OX=3702 GN=At4g25830 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.1e-32
Identity = 76/176 (43.18%), Postives = 106/176 (60.23%), Query Frame = 0


Query: 8   TEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSMAAAYNIL 67
           TE +LR   +  LLLT  L+  D QT +I ++ K  SFR L AL   +Y+D + AAYN++
Sbjct: 7   TEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVAAYNLV 66

Query: 68  QLCKCWISTQPKGASKLGADFNIYLFWISFFLDQAAAYLIFAANTAGMEAAFLAVTGAYD 127
           QL   W + + K ++           W S+ LDQ AAY++FA  +A  + + L VTG+ +
Sbjct: 67  QLGLGWYNVEQKTSNPK---------WFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSRE 126

Query: 128 FQWMKLCNRFHRFCYQVGGAFLCGYAAFFAMLVISFISAFNLFRHYSPNHFLRLKS 184
            QWMK C +F RFC+Q+G A +  Y A   M+++S ISAFNLFR YSP  F R KS
Sbjct: 127 LQWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSPKRFFRFKS 173

The following BLAST results are available for this feature:

BLAST of Lag0006365 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149074.1	2.4e-82	83.61	CASP-like protein 2C1 [Cucumis sativus] >KGN61092.1 hypothetical protein Csa_021...	[more]
XP_038889630.1	3.8e-80	81.97	CASP-like protein 2C1 [Benincasa hispida]	[more]
XP_023537147.1	1.8e-77	80.87	CASP-like protein 2C1 [Cucurbita pepo subsp. pepo] >KAG6586191.1 CASP-like prote...	[more]
XP_022938059.1	6.7e-77	80.33	CASP-like protein 2C1 [Cucurbita moschata]	[more]
XP_022965970.1	7.5e-76	79.23	CASP-like protein 2C1 [Cucurbita maxima]	[more]

BLAST of Lag0006365 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9IM09	3.0e-43	52.27	CASP-like protein 2C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_578614 PE=3 S...	[more]
Q5K4H9	3.3e-42	50.00	CASP-like protein XL3 OS=Gossypium hirsutum OX=3635 GN=XL3 PE=2 SV=1	[more]
A7Q6G6	1.5e-39	53.11	CASP-like protein 2C1 OS=Vitis vinifera OX=29760 GN=VIT_11s0052g01140 PE=2 SV=1	[more]
C6SZ04	6.4e-38	50.00	CASP-like protein 2C1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q8L8U9	3.1e-32	43.18	CASP-like protein 2C1 OS=Arabidopsis thaliana OX=3702 GN=At4g25830 PE=2 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 12..168 e-value: 1.4E-24 score: 84.6
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 9..157 e-value: 1.5E-29 score: 102.8
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 4..183
None	No IPR available	PANTHER	PTHR11615:SF241	CASP-LIKE PROTEIN 2C1	coord: 4..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0006365.1	Lag0006365.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding