Lag0006345 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0006345
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Protein DETOXIFICATION
Location	chr6: 41469963 .. 41470739 (+)
RNA-Seq Expression	Lag0006345
Synteny	Lag0006345

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAGACCAGAAGAACCAAACTCTTAAATCCCCACTGATTCCGATCTCCTCGCCGCCGTCGCCGCCGCCGCCGGGAGAGGGCGGAGGTTTCATGAAGGAAGAGGTATTGGAGGAGGCGAAAAAGCAGCTCCGATTAGCAGGGCCGCTGGTGACGGTGAATCTGTTGATAAACTGTTTGCAAATGATATCGGTCATGTTCGTCGGGCATCTCGGGCAGCTCCCTCTCGCCGGCGCTTCCATGGCTACTTCCTTTGCTTCTGTAACTGGTTTCAGTCTCCTGGTACGCTATTCGTCCATCTCTCAACTTTTTTTTTTCTTTTTTTTAGTTTTAATTGATGAAAGATTATTAAGTTTTCATATTGATATTTGCATAAAATAAAATCTCAAACATTTAAACTCAGTTATAACAAAAATTAACTAAACTTGTACCATCGATCTAGAGGTCAGGTAATCAAATTTTCCACTCTAGTATTGTCAAAAAAAAAAAAAAAAAAAAAAAAATCTATCATACTTAGGAGATGTGGATTTAAACTTATGATCTCTTTATTTGGATGGACATGATAAAAATTGAATAAGTATGATAAAAATTGAATAAGTATGGGAAGAAAATGGTATTCTAAATTCACCTTTAGTTTTACTCTTTCATGTATGTTTTTTTTTTTTTTTTTTTTTTCTTTTGTAAACTGTGCCTTTCTTTAATTTATTGGCTGTTTTTTAGTTTTTGAAAAATATGTTTTTCCGTAGAGTAAACAAGGAAAGGGAGAAGAATTAA

mRNA sequence

ATGGAAGAAGACCAGAAGAACCAAACTCTTAAATCCCCACTGATTCCGATCTCCTCGCCGCCGTCGCCGCCGCCGCCGGGAGAGGGCGGAGGTTTCATGAAGGAAGAGGTATTGGAGGAGGCGAAAAAGCAGCTCCGATTAGCAGGGCCGCTGGTGACGGTGAATCTGTTGATAAACTGTTTGCAAATGATATCGGTCATGTTCGTCGGGCATCTCGGGCAGCTCCCTCTCGCCGGCGCTTCCATGGCTACTTCCTTTGCTTCTGTAACTGGTTTCAGTCTCCTGTTTTTGAAAAATATGTTTTTCCGTAGAGTAAACAAGGAAAGGGAGAAGAATTAA

Coding sequence (CDS)

ATGGAAGAAGACCAGAAGAACCAAACTCTTAAATCCCCACTGATTCCGATCTCCTCGCCGCCGTCGCCGCCGCCGCCGGGAGAGGGCGGAGGTTTCATGAAGGAAGAGGTATTGGAGGAGGCGAAAAAGCAGCTCCGATTAGCAGGGCCGCTGGTGACGGTGAATCTGTTGATAAACTGTTTGCAAATGATATCGGTCATGTTCGTCGGGCATCTCGGGCAGCTCCCTCTCGCCGGCGCTTCCATGGCTACTTCCTTTGCTTCTGTAACTGGTTTCAGTCTCCTGTTTTTGAAAAATATGTTTTTCCGTAGAGTAAACAAGGAAAGGGAGAAGAATTAA

Protein sequence

MEEDQKNQTLKSPLIPISSPPSPPPPGEGGGFMKEEVLEEAKKQLRLAGPLVTVNLLINCLQMISVMFVGHLGQLPLAGASMATSFASVTGFSLLFLKNMFFRRVNKEREKN

Homology

[Close]

BLAST of Lag0006345 vs. NCBI nr
Match: XP_022153280.1 (protein DETOXIFICATION 16-like [Momordica charantia])

HSP 1 Score: 142.9 bits (359), Expect = 1.7e-30
Identity = 78/95 (82.11%), Postives = 81/95 (85.26%), Query Frame = 0


Query: 1  MEEDQKNQTLKSPLIPISSPPSPPPPGEGGGFMKEEVLEEAKKQLRLAGPLVTVNLLINC 60
          MEEDQK Q LKSPLIPISSPP P     GG   KEE++ E KKQL LAGPLV+VNLLINC
Sbjct: 1  MEEDQKMQNLKSPLIPISSPPQPE---NGGSVGKEEIVAEVKKQLTLAGPLVSVNLLINC 60

Query: 61 LQMISVMFVGHLGQLPLAGASMATSFASVTGFSLL 96
          LQMISVMFVGHLGQLPLAGASMATSFASVTGFSLL
Sbjct: 61 LQMISVMFVGHLGQLPLAGASMATSFASVTGFSLL 92

[Close]

BLAST of Lag0006345 vs. NCBI nr
Match: KAA0067265.1 (protein DETOXIFICATION 16-like isoform X2 [Cucumis melo var. makuwa] >TYK10874.1 protein DETOXIFICATION 16-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 127.1 bits (318), Expect = 9.5e-26
Identity = 69/101 (68.32%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 1   MEEDQKNQTLKSPLIPISSPPSPPPPGEGGGFMKEEVLEEAKKQLRLAGPLVTVNLLINC 60
           MEE+QK Q+L SPLI       PP   +GG F ++E+ EE K+QLRLAGPL+TVN+LINC
Sbjct: 1   MEEEQKKQSLDSPLI------LPPADDDGGCFTRDEIREEVKRQLRLAGPLMTVNVLINC 60

Query: 61  LQMISVMFVGHLGQLPLAGASMATSFASVTGFSLLFLKNMF 102
           LQMISVMFVGHLGQLPLA ASMATSFA+VTGFSLL   + F
Sbjct: 61  LQMISVMFVGHLGQLPLASASMATSFAAVTGFSLLVRNHSF 95

[Close]

BLAST of Lag0006345 vs. NCBI nr
Match: XP_008452139.1 (PREDICTED: protein DETOXIFICATION 16-like isoform X2 [Cucumis melo])

HSP 1 Score: 126.7 bits (317), Expect = 1.2e-25
Identity = 68/95 (71.58%), Postives = 78/95 (82.11%), Query Frame = 0


Query: 1  MEEDQKNQTLKSPLIPISSPPSPPPPGEGGGFMKEEVLEEAKKQLRLAGPLVTVNLLINC 60
          MEE+QK Q+L SPLI       PP   +GG F ++E+ EE K+QLRLAGPL+TVN+LINC
Sbjct: 1  MEEEQKKQSLDSPLI------LPPADDDGGCFTRDEIREEVKRQLRLAGPLMTVNVLINC 60

Query: 61 LQMISVMFVGHLGQLPLAGASMATSFASVTGFSLL 96
          LQMISVMFVGHLGQLPLA ASMATSFA+VTGFSLL
Sbjct: 61 LQMISVMFVGHLGQLPLASASMATSFAAVTGFSLL 89

[Close]

BLAST of Lag0006345 vs. NCBI nr
Match: XP_031736465.1 (protein DETOXIFICATION 16-like [Cucumis sativus] >KAE8651655.1 hypothetical protein Csa_021241 [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 3.4e-23
Identity = 67/96 (69.79%), Postives = 77/96 (80.21%), Query Frame = 0


Query: 1  MEEDQ-KNQTLKSPLIPISSPPSPPPPGEGGGFMKEEVLEEAKKQLRLAGPLVTVNLLIN 60
          MEE+Q K Q+L+SPLI       PP   +GG F + E  EE K+QLRLAGPL+T+N+LIN
Sbjct: 1  MEEEQTKKQSLESPLI------LPPREDDGGCFTRYETWEEVKRQLRLAGPLMTMNVLIN 60

Query: 61 CLQMISVMFVGHLGQLPLAGASMATSFASVTGFSLL 96
          CLQMISVMFVGHLGQLPLA ASMATSFA+VTGFSLL
Sbjct: 61 CLQMISVMFVGHLGQLPLASASMATSFAAVTGFSLL 90

[Close]

BLAST of Lag0006345 vs. NCBI nr
Match: TYK10876.1 (protein DETOXIFICATION 16-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 117.1 bits (292), Expect = 9.9e-23
Identity = 64/95 (67.37%), Postives = 77/95 (81.05%), Query Frame = 0


Query: 1  MEEDQKNQTLKSPLIPISSPPSPPPPGEGGGFMKEEVLEEAKKQLRLAGPLVTVNLLINC 60
          MEE+++    K  +  ++SP  PP   +G  F ++E+ EE K+QLRLAGPLVTVN+LI+C
Sbjct: 1  MEEEEQT---KKQISDLNSPFIPPRHHDGRSFTRDEIWEEVKRQLRLAGPLVTVNVLISC 60

Query: 61 LQMISVMFVGHLGQLPLAGASMATSFASVTGFSLL 96
          LQMISVMFVGHLGQLPLAGASMATSFASVTGFSLL
Sbjct: 61 LQMISVMFVGHLGQLPLAGASMATSFASVTGFSLL 92

[Close]

BLAST of Lag0006345 vs. ExPASy Swiss-Prot
Match: Q9FHB6 (Protein DETOXIFICATION 16 OS=Arabidopsis thaliana OX=3702 GN=DTX16 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.2e-16
Identity = 45/62 (72.58%), Postives = 51/62 (82.26%), Query Frame = 0


Query: 34 KEEVLEEAKKQLRLAGPLVTVNLLINCLQMISVMFVGHLGQLPLAGASMATSFASVTGFS 93
          K  V EE KKQL L+GPL+ V+LL  CLQ+ISVMFVGHLG LPL+ AS+ATSFASVTGFS
Sbjct: 20 KSSVKEEVKKQLWLSGPLIAVSLLQFCLQVISVMFVGHLGSLPLSAASIATSFASVTGFS 79

Query: 94 LL 96
           L
Sbjct: 80 FL 81

[Close]

BLAST of Lag0006345 vs. ExPASy Swiss-Prot
Match: F4IHU9 (Protein DETOXIFICATION 15 OS=Arabidopsis thaliana OX=3702 GN=DTX15 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 7.9e-15
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 37 VLEEAKKQLRLAGPLVTVNLLINCLQMISVMFVGHLGQLPLAGASMATSFASVTGFSLL 96
          V EE +KQL L+GPL+ V+LL  CLQ+ISVMFVGHLG LPL+ AS+ATSFASVTGF+ L
Sbjct: 24 VKEEVEKQLLLSGPLIAVSLLQFCLQIISVMFVGHLGSLPLSAASIATSFASVTGFTFL 82

[Close]

BLAST of Lag0006345 vs. ExPASy Swiss-Prot
Match: Q9C9U1 (Protein DETOXIFICATION 17 OS=Arabidopsis thaliana OX=3702 GN=DTX17 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.3e-13
Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 0


Query: 37 VLEEAKKQLRLAGPLVTVNLLINCLQMISVMFVGHLGQLPLAGASMATSFASVTGFSLL 96
          V EE KKQL L+ PL+ V+LL   LQ+ISVMFVGHLG LPL+ AS+ATSFASVTGF+ L
Sbjct: 21 VKEEVKKQLWLSAPLIGVSLLQYSLQVISVMFVGHLGSLPLSAASIATSFASVTGFTFL 79

[Close]

BLAST of Lag0006345 vs. ExPASy Swiss-Prot
Match: Q9C994 (Protein DETOXIFICATION 14 OS=Arabidopsis thaliana OX=3702 GN=DTX14 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.2e-09
Identity = 32/63 (50.79%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 34 KEEVLEEAKKQLRLAGPLVTVNLLINCLQMISVMFVGHLGQLPLAGASMATSFASVTGFS 93
          K+  L E KK   +AGP++ VN  +  LQ+IS+M VGHLG+L L+  ++A SF SVTGFS
Sbjct: 20 KDGFLRETKKLSYIAGPMIAVNSSMYVLQVISIMMVGHLGELFLSSTAIAVSFCSVTGFS 79

Query: 94 LLF 97
          ++F
Sbjct: 80 VVF 82

[Close]

BLAST of Lag0006345 vs. ExPASy Swiss-Prot
Match: Q8GXM8 (Protein DETOXIFICATION 2 OS=Arabidopsis thaliana OX=3702 GN=DTX2 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 8.4e-09
Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 36 EVLEEAKKQLRLAGPLVTVNLLINCLQMISVMFVGHLGQLPLAGASMATSFASVTGFSLL 95
          +V  E KK  RLA P+ TV +    L +ISVM  GH+G+L LAG ++ATSF +V+GFS++
Sbjct: 23 QVTVELKKVSRLAAPMATVTIAQYLLPVISVMVAGHIGELELAGVALATSFTNVSGFSIM 82

Query: 96 F 97
          F
Sbjct: 83 F 83

The following BLAST results are available for this feature:

BLAST of Lag0006345 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153280.1	1.7e-30	82.11	protein DETOXIFICATION 16-like [Momordica charantia]	[more]
KAA0067265.1	9.5e-26	68.32	protein DETOXIFICATION 16-like isoform X2 [Cucumis melo var. makuwa] >TYK10874.1...	[more]
XP_008452139.1	1.2e-25	71.58	PREDICTED: protein DETOXIFICATION 16-like isoform X2 [Cucumis melo]	[more]
XP_031736465.1	3.4e-23	69.79	protein DETOXIFICATION 16-like [Cucumis sativus] >KAE8651655.1 hypothetical prot...	[more]
TYK10876.1	9.9e-23	67.37	protein DETOXIFICATION 16-like isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of Lag0006345 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHB6	4.2e-16	72.58	Protein DETOXIFICATION 16 OS=Arabidopsis thaliana OX=3702 GN=DTX16 PE=2 SV=1	[more]
F4IHU9	7.9e-15	71.19	Protein DETOXIFICATION 15 OS=Arabidopsis thaliana OX=3702 GN=DTX15 PE=3 SV=1	[more]
Q9C9U1	3.3e-13	69.49	Protein DETOXIFICATION 17 OS=Arabidopsis thaliana OX=3702 GN=DTX17 PE=2 SV=1	[more]
Q9C994	2.2e-09	50.79	Protein DETOXIFICATION 14 OS=Arabidopsis thaliana OX=3702 GN=DTX14 PE=1 SV=1	[more]
Q8GXM8	8.4e-09	50.82	Protein DETOXIFICATION 2 OS=Arabidopsis thaliana OX=3702 GN=DTX2 PE=2 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002528	Multi antimicrobial extrusion protein	PFAM	PF01554	MatE	coord: 50..97 e-value: 1.1E-7 score: 31.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR11206:SF196	PROTEIN DETOXIFICATION	coord: 33..96
None	No IPR available	PANTHER	PTHR11206	MULTIDRUG RESISTANCE PROTEIN	coord: 33..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0006345.1	Lag0006345.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1990961	xenobiotic detoxification by transmembrane export across the plasma membrane
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0042910	xenobiotic transmembrane transporter activity