Lag0006275 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGTCCAATGGAGATTTTTGTTGACAACAAATCGGCCATTGCCTTAGCCAAAAATCCGGTATTTCATGGGAGGAGCAAGCACATTGATACCCGATTTCACTACATTCGAGATTGCTTTGCGAATAAAGAAGTGGAACTCAAATATATCAAGTCACAAGACCAAGCGGCAGACATTTTCACAAAGTCCCTCAAGTTGGAGACTTTTATCAGAATGAGGAGTTTACTTGGTGTAACAAATCAAGTTTAGGGGGGTGTTGAGAAAATGAAAAGTTTTTTCATTATTAAACTTTATTTGTGGCATTTAGTGTCACTTTTGGTTTTTGTGACTTTTGACTTTTGGTTTCTTGTAATCAATGGTGACTTTTGAGTTTTGGGAGTTAGGTGAGTTATGAGCATTTTATCACATTTAAAGTTTTGAACCATTGGTATTCTATGGTTACTTTTGTAAGCCTATATAAAGGCATGCTTAGTTGAATGAAAAATCATCTCCACTCATACTTGTCTTCCACGTTTTTCTAACAAGAATATGCTGGTAAATAACAAGATTAGTGAGAGAAAATATATATGTCGAGAGAAGTTATAAAAAAGTGTACGTTTGAGTCGAGAGAGACAGGTAAGAAAAAATGTGTTTAAAGAGAAGTTAGAGAAGTATATCGGTGGAGAGATATTGGTGAGAGAAAGTATATAAATGTTTTTTTTTTGGTTTAACAATATTTACGAGTCGAGGGACTGATGTAGATATTCACTAGTTGTTCCACACAAGTAAGATATCCATACTTGTATGGTCTATATTATGGTTCTCAAAATTTTATTTTCAAATTCTCAAGTTTCGCATTGTTACAGCCAGTTCCATTTTTCTTGTCTAATGTGTCCTTCTTGGGTTCATTTTATCTAGTTTTTTAAGGTCCCGTTTGATAACCGTTTGGTTTTTTGTTTTTTGTTTTTGAAAATTATTCTTGTTTTCTCCTACATTTCTTACCATGACTTTCATCCTAGTTAAGGTTGCATTTGAATTCCTAACCAAAATTTAAAAACAAAAACAAGTTTTTGAAAATTACTTTTTTTTTTTGTTTCCAAAATTGGACTTGGTTTTTGAAAACAAAGTAGAATATTGATACTAAAACCAAGAAACTTATAGGTGGAAGTATGTGTATATAAGTTTAATTTTTAAAAACTAAAAACCAAATGATTATCAAACGAGGCCTAAACTACTTTATTTATGTAATTGTGTACCACCAATTTAGATCCTTTACGAAGTCATTCTATGGTCGGTTAATGTTGTTTTCTGGTTACTCTGTGTGAGTCACTCATATATGCATATATGTTCTTTGGGTTTTTTTAGTTATGTACCAAATTATGTGCTTACAAAGTCGTTTCCGACCTTACATTCACTTTGCCTCTCTAAGATCCCTCTTTTCAAAATTTGAGTTTATAAGAATCCTGACTTCGTTCATAGTTTTGAGTTAGAAGGTGAAATTTGTTTATTAATAATTTGAACACATTGATTCTAAGACGTGTTTAATTGTGAAATAAATCTTGATCTTTTGATACTTTCTGTTTTGTTTTGTTTTCTTCTTGTAGGTGAATGAAGAGGTAGTGTGGCACAACATTATACTTAGTGAGAAAGAATTTGTAATAGTTTTATCCATCCATCTTTTGAATTAACAATGGTTGTGATATTGACTTAAACATATTTCAAATTTATACATTGGGTCTATATATGTTTTAGAATCTATTTAGGATTTATAAACTATTAGGATATACTATTTGTAATGTTTAATTGAAGTTTTGATGTAAACATTAAGGAGGGTCAAGGAGGGTCGAAGTGAGCATAGCTCACTAAGAGTCAAAGTGAGCATAGCCCAAGAAGGATCGAATTCCACCATCCCCAAATGTTGATGAACTCAAAAGAAAAAAATTGTTATTATTATTATTATTAAAAAAACCCATCTTCATGAATGGGACCCAAATCTTGTGGAGGAACCAATTGGGAAAAGATTCAAGGAGACGGTGTTAGTAGATGTGATGAATATATCGGTGAACCCTGATGTTCAGGGTCGCCATCAGGCATAAAGATAATATGCTGGAATGTTCGGGGAGTGGGGAATCCTCGGGCATTCAATAGTTTGCGCCAGTTGGTGCGAGAAGAAGATCCCCAACTCTTGTTCTTATCTGAAACAAAGATCAAGAGTTCAAAAGCGTCGGTGTTAAAAGAGAAGCTGAGGTTTGAGGGAGTGATTGTGGTGGATTGTGTAGGAAAGGGTGGTGGTTTGTGTTTGTTCTAGAAGGAGGGTTTGGAGGTGGTCTTGCGGTCCTATAGTAGGTATCATGTGGATTCAGTGGTGAAATCTAAAGATGGTCATTGGAGGTTTACGGGGTTTTATGGGGACCCAGAAGTGAGGAATAGGAAGTGTTCATGGGAGCTTATGCGGCGATTGAATGACTTGCCATCAATGCCTTGGGTATTAGGGGGAGACTTCAATGAGTTGTTAAGCTCAGAGAAGAAACAAGGTGGGAATGCCCGAGATCAAGGCCAGAAGCAAGAGTTTAGGGATGTGATTGATGACTGTGGCTTGACTGATATGATGTTTAGAGGGCACCCGTTCACATGGTTTAAACTGAAGAATGGTCGTGTGACAATGCAGGAGAGGTTGGATAGAGGCCTCTGTAATGATTCCTTTTGGATGATGTTCCTGTTCTCTACAGTGAGTCATTTGAAGTTTCGGTTGTCTGACCATTGTCCAGTCCGGATTGACGTGGATAGTTGTGGTGGGCTAGCTAGTCGTGGGTGTAGGCCACTGTTTCGTTTTGAGGAGGTTTGGACTCAGTATGATGAGTGCTGA ATGGAAGGTCCAATGGAGATTTTTGTTGACAACAAATCGGCCATTGCCTTAGCCAAAAATCCGGTATTTCATGGGAGGAGCAAGCACATTGATACCCGATTTCACTACATTCGAGATTGCTTTGCGAATAAAGAAGTGGAACTCAAATATATCAAGTCACAAGACCAAGCGGCAGACATTTTCACAAAGTCCCTCAAGTTGGAGACTTTTATCAGAATGAGGAGTTTACTTGGTGTAACAAATCAAGTGAATGAAGAGGTAGTGTGGCACAACATTATACTTAGGTCGCCATCAGGCATAAAGATAATATGCTGGAATGTTCGGGGAGTGGGGAATCCTCGGGCATTCAATAGTTTGCGCCAGTTGGTGCGAGAAGAAGATCCCCAACTCTTGTTCTTATCTGAAACAAAGATCAAGAGTTCAAAAGCGTCGGTGTTAAAAGAGAAGCTGAGGTATCATGTGGATTCAGTGGTGAAATCTAAAGATGGTCATTGGAGGTTTACGGGGTTTTATGGGGACCCAGAAGTGAGGAATAGGAAGTGTTCATGGGAGCTTATGCGGCGATTGAATGACTTGCCATCAATGCCTTGGGTATTAGGGGGAGACTTCAATGAGTTGTTAAGCTCAGAGAAGAAACAAGGTGGGAATGCCCGAGATCAAGGCCAGAAGCAAGAGTTTAGGGATGTGATTGATGACTGTGGCTTGACTGATATGATGTTTAGAGGGCACCCGTTCACATGGTTTAAACTGAAGAATGGTCGTGTGACAATGCAGGAGAGGTTGGATAGAGGCCTCTGTAATGATTCCTTTTGGATGATGTTCCTGTTCTCTACAGTGAGTCATTTGAAGTTTCGGTTGTCTGACCATTGTCCAGTCCGGATTGACGTGGATAGTTGTGGTGGGCTAGCTAGTCGTGGGTGTAGGCCACTGTTTCGTTTTGAGGAGGTTTGGACTCAGTATGATGAGTGCTGA ATGGAAGGTCCAATGGAGATTTTTGTTGACAACAAATCGGCCATTGCCTTAGCCAAAAATCCGGTATTTCATGGGAGGAGCAAGCACATTGATACCCGATTTCACTACATTCGAGATTGCTTTGCGAATAAAGAAGTGGAACTCAAATATATCAAGTCACAAGACCAAGCGGCAGACATTTTCACAAAGTCCCTCAAGTTGGAGACTTTTATCAGAATGAGGAGTTTACTTGGTGTAACAAATCAAGTGAATGAAGAGGTAGTGTGGCACAACATTATACTTAGGTCGCCATCAGGCATAAAGATAATATGCTGGAATGTTCGGGGAGTGGGGAATCCTCGGGCATTCAATAGTTTGCGCCAGTTGGTGCGAGAAGAAGATCCCCAACTCTTGTTCTTATCTGAAACAAAGATCAAGAGTTCAAAAGCGTCGGTGTTAAAAGAGAAGCTGAGGTATCATGTGGATTCAGTGGTGAAATCTAAAGATGGTCATTGGAGGTTTACGGGGTTTTATGGGGACCCAGAAGTGAGGAATAGGAAGTGTTCATGGGAGCTTATGCGGCGATTGAATGACTTGCCATCAATGCCTTGGGTATTAGGGGGAGACTTCAATGAGTTGTTAAGCTCAGAGAAGAAACAAGGTGGGAATGCCCGAGATCAAGGCCAGAAGCAAGAGTTTAGGGATGTGATTGATGACTGTGGCTTGACTGATATGATGTTTAGAGGGCACCCGTTCACATGGTTTAAACTGAAGAATGGTCGTGTGACAATGCAGGAGAGGTTGGATAGAGGCCTCTGTAATGATTCCTTTTGGATGATGTTCCTGTTCTCTACAGTGAGTCATTTGAAGTTTCGGTTGTCTGACCATTGTCCAGTCCGGATTGACGTGGATAGTTGTGGTGGGCTAGCTAGTCGTGGGTGTAGGCCACTGTTTCGTTTTGAGGAGGTTTGGACTCAGTATGATGAGTGCTGA MEGPMEIFVDNKSAIALAKNPVFHGRSKHIDTRFHYIRDCFANKEVELKYIKSQDQAADIFTKSLKLETFIRMRSLLGVTNQVNEEVVWHNIILRSPSGIKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLKEKLRYHVDSVVKSKDGHWRFTGFYGDPEVRNRKCSWELMRRLNDLPSMPWVLGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLDRGLCNDSFWMMFLFSTVSHLKFRLSDHCPVRIDVDSCGGLASRGCRPLFRFEEVWTQYDEC Homology
BLAST of Lag0006275 vs. NCBI nr
Match: RZB91206.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Glycine soja]) HSP 1 Score: 193.0 bits (489), Expect = 4.1e-45 Identity = 111/269 (41.26%), Postives = 154/269 (57.25%), Query Frame = 0
BLAST of Lag0006275 vs. NCBI nr
Match: KAF5443558.1 (hypothetical protein F2P56_036105, partial [Juglans regia]) HSP 1 Score: 192.2 bits (487), Expect = 7.0e-45 Identity = 102/259 (39.38%), Postives = 138/259 (53.28%), Query Frame = 0
BLAST of Lag0006275 vs. NCBI nr
Match: KAA3469008.1 (reverse transcriptase [Gossypium australe]) HSP 1 Score: 190.3 bits (482), Expect = 2.6e-44 Identity = 92/240 (38.33%), Postives = 137/240 (57.08%), Query Frame = 0
BLAST of Lag0006275 vs. NCBI nr
Match: XP_038697213.1 (uncharacterized protein LOC119994946 [Tripterygium wilfordii]) HSP 1 Score: 190.3 bits (482), Expect = 2.6e-44 Identity = 95/258 (36.82%), Postives = 141/258 (54.65%), Query Frame = 0
BLAST of Lag0006275 vs. NCBI nr
Match: KAF5477448.1 (hypothetical protein F2P56_004088 [Juglans regia]) HSP 1 Score: 184.1 bits (466), Expect = 1.9e-42 Identity = 104/246 (42.28%), Postives = 134/246 (54.47%), Query Frame = 0
BLAST of Lag0006275 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 77.0 bits (188), Expect = 4.3e-13 Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 0
BLAST of Lag0006275 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 4.1e-08 Identity = 30/77 (38.96%), Postives = 41/77 (53.25%), Query Frame = 0
BLAST of Lag0006275 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 9.2e-08 Identity = 25/73 (34.25%), Postives = 48/73 (65.75%), Query Frame = 0
BLAST of Lag0006275 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.8e-07 Identity = 28/76 (36.84%), Postives = 39/76 (51.32%), Query Frame = 0
BLAST of Lag0006275 vs. ExPASy TrEMBL
Match: A0A445IYM0 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Glycine soja OX=3848 GN=D0Y65_023564 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 2.0e-45 Identity = 111/269 (41.26%), Postives = 154/269 (57.25%), Query Frame = 0
BLAST of Lag0006275 vs. ExPASy TrEMBL
Match: A0A5B6VIZ4 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_014842 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 1.3e-44 Identity = 92/240 (38.33%), Postives = 137/240 (57.08%), Query Frame = 0
BLAST of Lag0006275 vs. ExPASy TrEMBL
Match: A0A2N9G5I8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22700 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 1.1e-43 Identity = 97/233 (41.63%), Postives = 135/233 (57.94%), Query Frame = 0
BLAST of Lag0006275 vs. ExPASy TrEMBL
Match: A0A2N9H936 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS36135 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 7.0e-43 Identity = 94/261 (36.02%), Postives = 138/261 (52.87%), Query Frame = 0
BLAST of Lag0006275 vs. ExPASy TrEMBL
Match: A0A2N9EVJ2 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6471 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 9.2e-43 Identity = 104/267 (38.95%), Postives = 145/267 (54.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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