Lag0006232 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0006232
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	DNA ligase
Location	chr6: 39690331 .. 39692613 (-)
RNA-Seq Expression	Lag0006232
Synteny	Lag0006232

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTGAGACACCATGGGCCTCGAAACATGTCTCGAAACATATAGAAAACCAGAAAATTTCCTCTCCTTCCAAGGTGTATAAAGATCGAGGAAGAAACGATGCTGCTTCAGGACAACACATTCTCTCATATTCAACTGAGAGATCTAGTGGAAACAAAAGAGGAAGGCCTGCTGCAAGGAGTATGCAGAAAGGGAAATCGGGTGTCGAACAAGTTCGAAGAGCTCGGGCACGAACAGCCAAGGGGCCTGCAAAAATAAGTGAAGTTGATTCAGACATCAGTGACCATACTGATGAAAAAACGAATGCAGAAACTGGAAATATTAGAACACTAAACAGTGAAAACTCAGAAAAGGAGTTTAAAATGCTAGAAAATGAGAGACCCGACAAGAAGAAAAGAGGAAGACCTACTACAAGGAACACACAGAAAGGGAAAGCAGGGGTCGAACAAGTTCGAAGAACTCGGGCACGTATAGCCAAGGGGTCAGGTAAAATAGGCGATGTTGAGTCAGACAGCAGTGACTCTACTGGTGAAAAACCAAAAGCGGAAGAAACTGGAATGGATAAAGGAAACATTGGAACAGTAAGCGAGGAAAACGCAAAAACAGATGAGTTCAATATGCTAGAAGACCGTGATTGGAAACAAAAAGGCAAGGCCATTGAACAAATTGATGTTGCAGAACCCAAATCTAATGTTCAGTTTGGTAAACTTCCAGAAGTCAATATATCTGAAAGGTATAATTACCAAGACACTGAAAAATCTGAAAAGCTGGAAGTCATGACCGATCCACTTCAAGCTATGTTATTAGATATGGTTCCAAGTCTTGGAATGAGTGAAACTAAAAGTAGTAGTACTGTTCTTGAGGAGAAGCAACCACCAGTACACAACAATTCTGAGCCAGCTAAGAAGAAAGTCAGCTACAAGGACGTTGCCAGTGAACTGCTTAAGGATTGGTAAAACGTGTGGTTTTTACTGGTTTGTCTATGTGTTTCTAATGTGATAGACTGACAAAAAGTCATCTAAGTATCATGTTGTAATTAAATCGCTGCTGTTCAATCATTTCAACACAAGGTATTTAATTTATGGTGAGTTTAGGACACTTAAAAAGAGTTATTAAGTGTTTTTTAAATATACTTTTGATAGTGTATTGTATCTGATCTCATGAAAGATTTAGAAATATTTTAAATTATTTTAAAATATTTTCCACTGAAAGTCATGTCAAAATTAGTCTTGAATGGGTTGGTTTTTCATTTATGGAGGCCAACTTTGTGAGTCTTGCAATGTGTCTTGAAATCCATTGTTTTTGTAACGCAAAATGTGTTATGGTTAGAGGAAGAAGTTGAAGATGGAGGAAAAGATGAAGTTGATGGAGATGAAGATGGAGGAAGAAGATGATGATGAGTATGGAGATGATGAAGATGAAAAAAGAAAAAGAAAAAAAAAAGAATAATAAAATATCAGTTAAACTATTTTTATTTAAAAAAATAAAAAATATATTTTTTTTAATAAAAAAATGCACCTCACGTCAACAATCTGTTAGGGTTTAATGAAAATTTGGATGAAAGGACCAACAATGTAGTGAAATCCAAACCTCATAAGCAAGAATGGAGTTTGAAAACTTAGGGAACAAATGAAATCTAATTCAAACAATATTTTTTTCTTAGGTTGTGGAAAGTTCAACAAACACGTAATTATTTTTCTAGAATAATCTAACACCAGAATGGTTATTGATAGCAACTTTGTTCTCGTTGCTTCCTCTAGTTTTATGCCATGCGCATTTTCTGTTTTGTATTTAATTTGTTCAATTTGTTATTCCAAACCCTTAATTGATTCTATAAATTTAGTCATTTCTCAACATTCAATACACAGAAGAGAATAGTGCATTCATCCTCCATTTTATTTGCAATTGTTTTCTTGATATCAAAGCTCGACTATGCCCAATGCCTCATCTAATTTTAGTTCTTCGACAAATGTAACCTTTAGAAGTCCTCTCAACAAATTGCTATCATCAAGTTAGACCAGGGAAATTTTCTTTTCTGGAAAAATCTTGCGTTGCTCATATTACGTAGTTACAAGTTAGAAGGCCACCTTTCCAGCAAAAAGCCATGTCCTCCAACAAAAATTTCAGCATCAAATGTAGCTGAAAATTCAGGAGCCTCAGCAGAAGCAGATGTCTTTGGAGTATCAAGTTCAAGACCTGCAGTGACAGCAGTAGTTAACCCACTTTATGAATCCTGGATAGCTATTGATCAGCTTCTTCTTAGCTGGCTATATAATTAA

mRNA sequence

ATGGATTCTGAGACACCATGGGCCTCGAAACATGTCTCGAAACATATAGAAAACCAGAAAATTTCCTCTCCTTCCAAGGTGTATAAAGATCGAGGAAGAAACGATGCTGCTTCAGGACAACACATTCTCTCATATTCAACTGAGAGATCTAGTGGAAACAAAAGAGGAAGGCCTGCTGCAAGGAGTATGCAGAAAGGGAAATCGGGTGTCGAACAAGTTCGAAGAGCTCGGGCACGAACAGCCAAGGGGCCTGCAAAAATAAGTGAAGTTGATTCAGACATCAGTGACCATACTGATGAAAAAACGAATGCAGAAACTGGAAATATTAGAACACTAAACAGTGAAAACTCAGAAAAGGAGTTTAAAATGCTAGAAAATGAGAGACCCGACAAGAAGAAAAGAGGAAGACCTACTACAAGGAACACACAGAAAGGGAAAGCAGGGGTCGAACAAGTTCGAAGAACTCGGGCACGTATAGCCAAGGGGTCAGGTAAAATAGGCGATGTTGAGTCAGACAGCAGTGACTCTACTGGTGAAAAACCAAAAGCGGAAGAAACTGGAATGGATAAAGGAAACATTGGAACAGTAAGCGAGGAAAACGCAAAAACAGATGAGTTCAATATGCTAGAAGACCGTGATTGGAAACAAAAAGGCAAGGCCATTGAACAAATTGATGTTGCAGAACCCAAATCTAATGTTCAGTTTGGTAAACTTCCAGAAGTCAATATATCTGAAAGGTATAATTACCAAGACACTGAAAAATCTGAAAAGCTGGAAGTCATGACCGATCCACTTCAAGCTATGTTATTAGATATGGTTCCAAGTCTTGGAATGAGTGAAACTAAAAGTAGTAGTACTGTTCTTGAGGAGAAGCAACCACCAGTACACAACAATTCTGAGCCAGCTAAGAAGAAAGTCAGCTACAAGGACGTTGCCAGTGAACTGCTTAAGGATTGTTACAAGTTAGAAGGCCACCTTTCCAGCAAAAAGCCATGTCCTCCAACAAAAATTTCAGCATCAAATGTAGCTGAAAATTCAGGAGCCTCAGCAGAAGCAGATGTCTTTGGAGTATCAAGTTCAAGACCTGCAGTGACAGCAGTAGTTAACCCACTTTATGAATCCTGGATAGCTATTGATCAGCTTCTTCTTAGCTGGCTATATAATTAA

Coding sequence (CDS)

ATGGATTCTGAGACACCATGGGCCTCGAAACATGTCTCGAAACATATAGAAAACCAGAAAATTTCCTCTCCTTCCAAGGTGTATAAAGATCGAGGAAGAAACGATGCTGCTTCAGGACAACACATTCTCTCATATTCAACTGAGAGATCTAGTGGAAACAAAAGAGGAAGGCCTGCTGCAAGGAGTATGCAGAAAGGGAAATCGGGTGTCGAACAAGTTCGAAGAGCTCGGGCACGAACAGCCAAGGGGCCTGCAAAAATAAGTGAAGTTGATTCAGACATCAGTGACCATACTGATGAAAAAACGAATGCAGAAACTGGAAATATTAGAACACTAAACAGTGAAAACTCAGAAAAGGAGTTTAAAATGCTAGAAAATGAGAGACCCGACAAGAAGAAAAGAGGAAGACCTACTACAAGGAACACACAGAAAGGGAAAGCAGGGGTCGAACAAGTTCGAAGAACTCGGGCACGTATAGCCAAGGGGTCAGGTAAAATAGGCGATGTTGAGTCAGACAGCAGTGACTCTACTGGTGAAAAACCAAAAGCGGAAGAAACTGGAATGGATAAAGGAAACATTGGAACAGTAAGCGAGGAAAACGCAAAAACAGATGAGTTCAATATGCTAGAAGACCGTGATTGGAAACAAAAAGGCAAGGCCATTGAACAAATTGATGTTGCAGAACCCAAATCTAATGTTCAGTTTGGTAAACTTCCAGAAGTCAATATATCTGAAAGGTATAATTACCAAGACACTGAAAAATCTGAAAAGCTGGAAGTCATGACCGATCCACTTCAAGCTATGTTATTAGATATGGTTCCAAGTCTTGGAATGAGTGAAACTAAAAGTAGTAGTACTGTTCTTGAGGAGAAGCAACCACCAGTACACAACAATTCTGAGCCAGCTAAGAAGAAAGTCAGCTACAAGGACGTTGCCAGTGAACTGCTTAAGGATTGTTACAAGTTAGAAGGCCACCTTTCCAGCAAAAAGCCATGTCCTCCAACAAAAATTTCAGCATCAAATGTAGCTGAAAATTCAGGAGCCTCAGCAGAAGCAGATGTCTTTGGAGTATCAAGTTCAAGACCTGCAGTGACAGCAGTAGTTAACCCACTTTATGAATCCTGGATAGCTATTGATCAGCTTCTTCTTAGCTGGCTATATAATTAA

Protein sequence

MDSETPWASKHVSKHIENQKISSPSKVYKDRGRNDAASGQHILSYSTERSSGNKRGRPAARSMQKGKSGVEQVRRARARTAKGPAKISEVDSDISDHTDEKTNAETGNIRTLNSENSEKEFKMLENERPDKKKRGRPTTRNTQKGKAGVEQVRRTRARIAKGSGKIGDVESDSSDSTGEKPKAEETGMDKGNIGTVSEENAKTDEFNMLEDRDWKQKGKAIEQIDVAEPKSNVQFGKLPEVNISERYNYQDTEKSEKLEVMTDPLQAMLLDMVPSLGMSETKSSSTVLEEKQPPVHNNSEPAKKKVSYKDVASELLKDCYKLEGHLSSKKPCPPTKISASNVAENSGASAEADVFGVSSSRPAVTAVVNPLYESWIAIDQLLLSWLYN

Homology

[Close]

BLAST of Lag0006232 vs. NCBI nr
Match: XP_038889084.1 (DNA ligase 4 isoform X1 [Benincasa hispida])

HSP 1 Score: 372.1 bits (954), Expect = 5.9e-99
Identity = 224/319 (70.22%), Postives = 255/319 (79.94%), Query Frame = 0


Query: 1    MDSETPWASKHVSKHIENQKISSPSKVYKDRGRNDAASGQHILSYSTERSSGNKRGRPAA 60
            MD E P A    S++I+NQ+I SPS+ YKD+GRN+AASGQH LSYSTERS G KR RPAA
Sbjct: 923  MDFEMPSA----SENIDNQQIPSPSQEYKDQGRNEAASGQHTLSYSTERSGGKKRRRPAA 982

Query: 61   RSMQKGKSGVEQVRRARARTAKGPAKISEVDSDISDHTDEKTNAETGNIRTLNSENSEK- 120
            RSMQKGKSGV+QVR  R RTAKGPAKISEV+SD SD+TDEKTNAET N+ TL SE SEK 
Sbjct: 983  RSMQKGKSGVKQVREFRTRTAKGPAKISEVESDNSDYTDEKTNAETRNVGTLCSETSEKN 1042

Query: 121  EFKMLENERPDKKKRGRPTTRNTQKGKAGVEQVRRTRARIAKGSGKIGDVESDSSDSTGE 180
            EFK LENE  + KKRGRPT  NTQKGKAG + VRRTRARI KGS KIGD+ES S+DST E
Sbjct: 1043 EFKTLENEISNTKKRGRPTAGNTQKGKAGAKAVRRTRARITKGSAKIGDIESGSNDSTDE 1102

Query: 181  KPKAEETGMDKGNIGTVSEENAKTDEFNMLEDRDWKQKGKAIEQIDVAEPKSNVQFGKLP 240
            K   +E   +K       EEN+K DEF ML D D KQKGKAIE+   A+  SNV FGK+P
Sbjct: 1103 KTNTDELRKEK-------EENSKRDEFKMLIDHDPKQKGKAIEENVRADFGSNVDFGKVP 1162

Query: 241  EVNISERYNYQDTEKSEKLEVMTDPLQAMLLDMVPSLGMSETKSSSTVLEEKQPPVHNNS 300
            EV ISERY+++D EK EKLE+M DPL+AMLLDMVPSLGMS +KSSSTV+EEK+ PV++NS
Sbjct: 1163 EVGISERYDFKDVEKCEKLEIMKDPLEAMLLDMVPSLGMSGSKSSSTVVEEKK-PVNSNS 1222

Query: 301  EPAKKKVSYKDVASELLKD 319
            EPAKKKVSYKDVASELLKD
Sbjct: 1223 EPAKKKVSYKDVASELLKD 1229

[Close]

BLAST of Lag0006232 vs. NCBI nr
Match: XP_038889088.1 (DNA ligase 4 isoform X4 [Benincasa hispida] >XP_038889089.1 DNA ligase 4 isoform X4 [Benincasa hispida] >XP_038889090.1 DNA ligase 4 isoform X4 [Benincasa hispida])

HSP 1 Score: 372.1 bits (954), Expect = 5.9e-99
Identity = 224/319 (70.22%), Postives = 255/319 (79.94%), Query Frame = 0


Query: 1    MDSETPWASKHVSKHIENQKISSPSKVYKDRGRNDAASGQHILSYSTERSSGNKRGRPAA 60
            MD E P A    S++I+NQ+I SPS+ YKD+GRN+AASGQH LSYSTERS G KR RPAA
Sbjct: 763  MDFEMPSA----SENIDNQQIPSPSQEYKDQGRNEAASGQHTLSYSTERSGGKKRRRPAA 822

Query: 61   RSMQKGKSGVEQVRRARARTAKGPAKISEVDSDISDHTDEKTNAETGNIRTLNSENSEK- 120
            RSMQKGKSGV+QVR  R RTAKGPAKISEV+SD SD+TDEKTNAET N+ TL SE SEK 
Sbjct: 823  RSMQKGKSGVKQVREFRTRTAKGPAKISEVESDNSDYTDEKTNAETRNVGTLCSETSEKN 882

Query: 121  EFKMLENERPDKKKRGRPTTRNTQKGKAGVEQVRRTRARIAKGSGKIGDVESDSSDSTGE 180
            EFK LENE  + KKRGRPT  NTQKGKAG + VRRTRARI KGS KIGD+ES S+DST E
Sbjct: 883  EFKTLENEISNTKKRGRPTAGNTQKGKAGAKAVRRTRARITKGSAKIGDIESGSNDSTDE 942

Query: 181  KPKAEETGMDKGNIGTVSEENAKTDEFNMLEDRDWKQKGKAIEQIDVAEPKSNVQFGKLP 240
            K   +E   +K       EEN+K DEF ML D D KQKGKAIE+   A+  SNV FGK+P
Sbjct: 943  KTNTDELRKEK-------EENSKRDEFKMLIDHDPKQKGKAIEENVRADFGSNVDFGKVP 1002

Query: 241  EVNISERYNYQDTEKSEKLEVMTDPLQAMLLDMVPSLGMSETKSSSTVLEEKQPPVHNNS 300
            EV ISERY+++D EK EKLE+M DPL+AMLLDMVPSLGMS +KSSSTV+EEK+ PV++NS
Sbjct: 1003 EVGISERYDFKDVEKCEKLEIMKDPLEAMLLDMVPSLGMSGSKSSSTVVEEKK-PVNSNS 1062

Query: 301  EPAKKKVSYKDVASELLKD 319
            EPAKKKVSYKDVASELLKD
Sbjct: 1063 EPAKKKVSYKDVASELLKD 1069

[Close]

BLAST of Lag0006232 vs. NCBI nr
Match: XP_038889086.1 (DNA ligase 4 isoform X3 [Benincasa hispida] >XP_038889087.1 DNA ligase 4 isoform X3 [Benincasa hispida])

HSP 1 Score: 372.1 bits (954), Expect = 5.9e-99
Identity = 224/319 (70.22%), Postives = 255/319 (79.94%), Query Frame = 0


Query: 1    MDSETPWASKHVSKHIENQKISSPSKVYKDRGRNDAASGQHILSYSTERSSGNKRGRPAA 60
            MD E P A    S++I+NQ+I SPS+ YKD+GRN+AASGQH LSYSTERS G KR RPAA
Sbjct: 805  MDFEMPSA----SENIDNQQIPSPSQEYKDQGRNEAASGQHTLSYSTERSGGKKRRRPAA 864

Query: 61   RSMQKGKSGVEQVRRARARTAKGPAKISEVDSDISDHTDEKTNAETGNIRTLNSENSEK- 120
            RSMQKGKSGV+QVR  R RTAKGPAKISEV+SD SD+TDEKTNAET N+ TL SE SEK 
Sbjct: 865  RSMQKGKSGVKQVREFRTRTAKGPAKISEVESDNSDYTDEKTNAETRNVGTLCSETSEKN 924

Query: 121  EFKMLENERPDKKKRGRPTTRNTQKGKAGVEQVRRTRARIAKGSGKIGDVESDSSDSTGE 180
            EFK LENE  + KKRGRPT  NTQKGKAG + VRRTRARI KGS KIGD+ES S+DST E
Sbjct: 925  EFKTLENEISNTKKRGRPTAGNTQKGKAGAKAVRRTRARITKGSAKIGDIESGSNDSTDE 984

Query: 181  KPKAEETGMDKGNIGTVSEENAKTDEFNMLEDRDWKQKGKAIEQIDVAEPKSNVQFGKLP 240
            K   +E   +K       EEN+K DEF ML D D KQKGKAIE+   A+  SNV FGK+P
Sbjct: 985  KTNTDELRKEK-------EENSKRDEFKMLIDHDPKQKGKAIEENVRADFGSNVDFGKVP 1044

Query: 241  EVNISERYNYQDTEKSEKLEVMTDPLQAMLLDMVPSLGMSETKSSSTVLEEKQPPVHNNS 300
            EV ISERY+++D EK EKLE+M DPL+AMLLDMVPSLGMS +KSSSTV+EEK+ PV++NS
Sbjct: 1045 EVGISERYDFKDVEKCEKLEIMKDPLEAMLLDMVPSLGMSGSKSSSTVVEEKK-PVNSNS 1104

Query: 301  EPAKKKVSYKDVASELLKD 319
            EPAKKKVSYKDVASELLKD
Sbjct: 1105 EPAKKKVSYKDVASELLKD 1111

[Close]

BLAST of Lag0006232 vs. NCBI nr
Match: XP_038889085.1 (DNA ligase 4 isoform X2 [Benincasa hispida])

HSP 1 Score: 372.1 bits (954), Expect = 5.9e-99
Identity = 224/319 (70.22%), Postives = 255/319 (79.94%), Query Frame = 0


Query: 1    MDSETPWASKHVSKHIENQKISSPSKVYKDRGRNDAASGQHILSYSTERSSGNKRGRPAA 60
            MD E P A    S++I+NQ+I SPS+ YKD+GRN+AASGQH LSYSTERS G KR RPAA
Sbjct: 891  MDFEMPSA----SENIDNQQIPSPSQEYKDQGRNEAASGQHTLSYSTERSGGKKRRRPAA 950

Query: 61   RSMQKGKSGVEQVRRARARTAKGPAKISEVDSDISDHTDEKTNAETGNIRTLNSENSEK- 120
            RSMQKGKSGV+QVR  R RTAKGPAKISEV+SD SD+TDEKTNAET N+ TL SE SEK 
Sbjct: 951  RSMQKGKSGVKQVREFRTRTAKGPAKISEVESDNSDYTDEKTNAETRNVGTLCSETSEKN 1010

Query: 121  EFKMLENERPDKKKRGRPTTRNTQKGKAGVEQVRRTRARIAKGSGKIGDVESDSSDSTGE 180
            EFK LENE  + KKRGRPT  NTQKGKAG + VRRTRARI KGS KIGD+ES S+DST E
Sbjct: 1011 EFKTLENEISNTKKRGRPTAGNTQKGKAGAKAVRRTRARITKGSAKIGDIESGSNDSTDE 1070

Query: 181  KPKAEETGMDKGNIGTVSEENAKTDEFNMLEDRDWKQKGKAIEQIDVAEPKSNVQFGKLP 240
            K   +E   +K       EEN+K DEF ML D D KQKGKAIE+   A+  SNV FGK+P
Sbjct: 1071 KTNTDELRKEK-------EENSKRDEFKMLIDHDPKQKGKAIEENVRADFGSNVDFGKVP 1130

Query: 241  EVNISERYNYQDTEKSEKLEVMTDPLQAMLLDMVPSLGMSETKSSSTVLEEKQPPVHNNS 300
            EV ISERY+++D EK EKLE+M DPL+AMLLDMVPSLGMS +KSSSTV+EEK+ PV++NS
Sbjct: 1131 EVGISERYDFKDVEKCEKLEIMKDPLEAMLLDMVPSLGMSGSKSSSTVVEEKK-PVNSNS 1190

Query: 301  EPAKKKVSYKDVASELLKD 319
            EPAKKKVSYKDVASELLKD
Sbjct: 1191 EPAKKKVSYKDVASELLKD 1197

[Close]

BLAST of Lag0006232 vs. NCBI nr
Match: XP_022149864.1 (DNA ligase 4 isoform X3 [Momordica charantia])

HSP 1 Score: 349.7 bits (896), Expect = 3.1e-92
Identity = 226/342 (66.08%), Postives = 249/342 (72.81%), Query Frame = 0


Query: 1    MDSETPWASKHVSKHIENQKISSPSKVYKDRGRNDAASGQHILSYSTERSSGNKRGRPAA 60
            +DSETP AS++     ENQKISSPS  YKD+GRN+AASGQH+L +STERS G KRG+  A
Sbjct: 924  IDSETPLASENT----ENQKISSPSNAYKDQGRNEAASGQHMLLHSTERSGGKKRGKSTA 983

Query: 61   RSMQKGKSGVEQVRRARARTAKGPAKISEVDSDISDHTDEKTNAETGNIRTLNSEN-SEK 120
            RSMQKGK  VEQVRRARARTAKGPAKISEV+SD SD+ DEKTNAET NI T  SEN    
Sbjct: 984  RSMQKGKLSVEQVRRARARTAKGPAKISEVESDSSDYNDEKTNAETENIGTPCSENLKTN 1043

Query: 121  EFKMLEN------------------ERPDKKKRGRPTT-----RNTQKGKAGVEQVRRTR 180
            E   LEN                  ER  +KKRGR  T     R+ QKGKAGVEQ +RTR
Sbjct: 1044 ELTKLENFDPSRKGKGIEHVPLCSTERTGEKKRGRRPTPTASARSMQKGKAGVEQGQRTR 1103

Query: 181  ARIAKGSGKIGDVESDSSDSTGEKPKAEETGMDKGNIGTVSEENAKTDEFNMLEDRDWKQ 240
            AR AKGS KIG VESDSSD+T +K  AE  G++K NIGTV   N+ T+EF   E+ D   
Sbjct: 1104 ARTAKGSAKIGGVESDSSDTTDDKTNAEGNGVEKRNIGTVCPANSNTNEFIWPENCDSSH 1163

Query: 241  KGKAIEQIDVAEPKSNVQFGKLPEVNISERYNYQDTEKSEKLEVMTDPLQAMLLDMVPSL 300
            KGK IEQ D+AE KSNV     PE+ IS RYN Q  E+SEKLEVMTDPLQAMLLDMVPSL
Sbjct: 1164 KGKVIEQDDLAEFKSNV-----PEIEISTRYNCQGIEESEKLEVMTDPLQAMLLDMVPSL 1223

Query: 301  GMSETKSSSTVLEEKQPPVHNNSEPAKKKVSYKDVASELLKD 319
            GMSETKSSSTVLEEKQ PV NNSEP KKKVSYKDVASELLKD
Sbjct: 1224 GMSETKSSSTVLEEKQ-PVQNNSEPTKKKVSYKDVASELLKD 1255

[Close]

BLAST of Lag0006232 vs. ExPASy Swiss-Prot
Match: Q9LL84 (DNA ligase 4 OS=Arabidopsis thaliana OX=3702 GN=LIG4 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.4e-07
Identity = 76/296 (25.68%), Postives = 129/296 (43.58%), Query Frame = 0


Query: 53   NKRGRPAARSMQKGKSGVEQVRRARARTAKGPAKISEVDSDISDHTDEKTNAETGNIRTL 112
            + RGR   R++++G+S    ++R + R  K P+KIS  +++ SD ++EK +    +I   
Sbjct: 952  SSRGRSNTRAVKRGRSSTNSLQRVQRRRGKQPSKISGDETEESDASEEKVSTRLSDIAE- 1011

Query: 113  NSENSEKEFKMLENERPDKKKRGRPTTRNTQKGKAGVEQVRRT-RARIAKGSGKIGDVES 172
                        E +   + +R     +  ++GK+ V Q +R  R+R  K + KIG  ES
Sbjct: 1012 ------------ETDSFGEAQRNSSRGKCAKRGKSRVGQTQRVQRSRRGKKAAKIGGDES 1071

Query: 173  DSSDSTGEKPKAEETGMDKGNIGTVSEENAKTDEFNMLEDRDWKQKGKAIEQIDVAEPKS 232
            D +D             ++GN    S EN +T E ++ +  + +Q+   +   +  +   
Sbjct: 1072 DENDELDGNNNV-SADAEEGNAAGRSVENEETREPDIAKYTESQQRDNTVAVEEALQDSR 1131

Query: 233  NVQFGKLPEVNISERYNYQDTEKSEKLEVMTDPLQAMLLDMVPSLGMSETKSSS-TVLEE 292
            N +                + +  EKL++  DPLQAML+ M P      T++S+ T  E 
Sbjct: 1132 NAK---------------TEMDMKEKLQIHEDPLQAMLMKMFPIPSQKTTETSNRTTGEY 1191

Query: 293  KQPPVHNNSEPA----------------------------KKKVSYKDVASELLKD 319
            ++  V    E +                            KKKVSY+DVA ELLKD
Sbjct: 1192 RKANVSGECESSEKRKLDAETDNTSVNAGAESDVVPPLVKKKKVSYRDVAGELLKD 1218

[Close]

BLAST of Lag0006232 vs. ExPASy Swiss-Prot
Match: Q7X7E9 (Putative DNA ligase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=LIG4 PE=2 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 1.4e-05
Identity = 97/376 (25.80%), Postives = 146/376 (38.83%), Query Frame = 0


Query: 34   NDAASGQHILSYSTERSSGNKRGRPAARSMQKGKSGVEQVRRARARTAKGPAKISEVDSD 93
            N+ A   H+      + +  KRGRP++ + +  K     VRR RAR     AKI +V+ +
Sbjct: 962  NEKADTSHV------KHAPRKRGRPSSSASRTAKPAPRPVRRTRARRGNQHAKIDDVEPE 1021

Query: 94   ISDHTD---EKTNAETGNIRTLNSENSEKEFKMLENERPDKKKRGRP-------TTRNTQ 153
             SDH +   +    +T NI  +  ++ +K+       R  + +RG+         +  + 
Sbjct: 1022 ESDHGETGLDDQIPDTDNISKMEVDSFDKDQVSARPVRRTRARRGKQHAKIDYGQSEESD 1081

Query: 154  KGKAGVEQVRRTRARIAKGSGKIGDVESDSSD-STGEKPKAE------------------ 213
             G+ G +  R     I+K       +E DSSD   G  P A                   
Sbjct: 1082 PGETGQDDQRLDADYISK-------MEEDSSDRDQGAHPTAPRVVRRSRAQRGKWLAKID 1141

Query: 214  ------ETGMDKGNIGTVSEENAKTDEFNMLEDRDWKQKGKAIEQIDVAEPK----SNVQ 273
                  ETG D   +   ++  +K +E    +D++    G  +  +D  EPK    S  +
Sbjct: 1142 RETGPGETGQDDKKLN--ADSISKMEEHAHDKDQE-PPPGAQLITLDEQEPKGIKSSTTE 1201

Query: 274  FGKLPEVNISERYNYQDTEKS------EKLEVMTDPLQAMLLDMVPSLGMSETKSSSTVL 319
                P+   ++    +DT ++      EK+E M DPL AMLLDM+PSLG  +T   + V 
Sbjct: 1202 TPSSPKHERNQTVLRRDTAETTSSATCEKMEQMVDPLHAMLLDMIPSLGQMKTDVGNRVA 1261

[Close]

BLAST of Lag0006232 vs. ExPASy TrEMBL
Match: A0A6J1D962 (DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 1.5e-92
Identity = 226/342 (66.08%), Postives = 249/342 (72.81%), Query Frame = 0


Query: 1    MDSETPWASKHVSKHIENQKISSPSKVYKDRGRNDAASGQHILSYSTERSSGNKRGRPAA 60
            +DSETP AS++     ENQKISSPS  YKD+GRN+AASGQH+L +STERS G KRG+  A
Sbjct: 833  IDSETPLASENT----ENQKISSPSNAYKDQGRNEAASGQHMLLHSTERSGGKKRGKSTA 892

Query: 61   RSMQKGKSGVEQVRRARARTAKGPAKISEVDSDISDHTDEKTNAETGNIRTLNSEN-SEK 120
            RSMQKGK  VEQVRRARARTAKGPAKISEV+SD SD+ DEKTNAET NI T  SEN    
Sbjct: 893  RSMQKGKLSVEQVRRARARTAKGPAKISEVESDSSDYNDEKTNAETENIGTPCSENLKTN 952

Query: 121  EFKMLEN------------------ERPDKKKRGRPTT-----RNTQKGKAGVEQVRRTR 180
            E   LEN                  ER  +KKRGR  T     R+ QKGKAGVEQ +RTR
Sbjct: 953  ELTKLENFDPSRKGKGIEHVPLCSTERTGEKKRGRRPTPTASARSMQKGKAGVEQGQRTR 1012

Query: 181  ARIAKGSGKIGDVESDSSDSTGEKPKAEETGMDKGNIGTVSEENAKTDEFNMLEDRDWKQ 240
            AR AKGS KIG VESDSSD+T +K  AE  G++K NIGTV   N+ T+EF   E+ D   
Sbjct: 1013 ARTAKGSAKIGGVESDSSDTTDDKTNAEGNGVEKRNIGTVCPANSNTNEFIWPENCDSSH 1072

Query: 241  KGKAIEQIDVAEPKSNVQFGKLPEVNISERYNYQDTEKSEKLEVMTDPLQAMLLDMVPSL 300
            KGK IEQ D+AE KSNV     PE+ IS RYN Q  E+SEKLEVMTDPLQAMLLDMVPSL
Sbjct: 1073 KGKVIEQDDLAEFKSNV-----PEIEISTRYNCQGIEESEKLEVMTDPLQAMLLDMVPSL 1132

Query: 301  GMSETKSSSTVLEEKQPPVHNNSEPAKKKVSYKDVASELLKD 319
            GMSETKSSSTVLEEKQ PV NNSEP KKKVSYKDVASELLKD
Sbjct: 1133 GMSETKSSSTVLEEKQ-PVQNNSEPTKKKVSYKDVASELLKD 1164

[Close]

BLAST of Lag0006232 vs. ExPASy TrEMBL
Match: A0A6J1D6X8 (DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 1.5e-92
Identity = 226/342 (66.08%), Postives = 249/342 (72.81%), Query Frame = 0


Query: 1    MDSETPWASKHVSKHIENQKISSPSKVYKDRGRNDAASGQHILSYSTERSSGNKRGRPAA 60
            +DSETP AS++     ENQKISSPS  YKD+GRN+AASGQH+L +STERS G KRG+  A
Sbjct: 923  IDSETPLASENT----ENQKISSPSNAYKDQGRNEAASGQHMLLHSTERSGGKKRGKSTA 982

Query: 61   RSMQKGKSGVEQVRRARARTAKGPAKISEVDSDISDHTDEKTNAETGNIRTLNSEN-SEK 120
            RSMQKGK  VEQVRRARARTAKGPAKISEV+SD SD+ DEKTNAET NI T  SEN    
Sbjct: 983  RSMQKGKLSVEQVRRARARTAKGPAKISEVESDSSDYNDEKTNAETENIGTPCSENLKTN 1042

Query: 121  EFKMLEN------------------ERPDKKKRGRPTT-----RNTQKGKAGVEQVRRTR 180
            E   LEN                  ER  +KKRGR  T     R+ QKGKAGVEQ +RTR
Sbjct: 1043 ELTKLENFDPSRKGKGIEHVPLCSTERTGEKKRGRRPTPTASARSMQKGKAGVEQGQRTR 1102

Query: 181  ARIAKGSGKIGDVESDSSDSTGEKPKAEETGMDKGNIGTVSEENAKTDEFNMLEDRDWKQ 240
            AR AKGS KIG VESDSSD+T +K  AE  G++K NIGTV   N+ T+EF   E+ D   
Sbjct: 1103 ARTAKGSAKIGGVESDSSDTTDDKTNAEGNGVEKRNIGTVCPANSNTNEFIWPENCDSSH 1162

Query: 241  KGKAIEQIDVAEPKSNVQFGKLPEVNISERYNYQDTEKSEKLEVMTDPLQAMLLDMVPSL 300
            KGK IEQ D+AE KSNV     PE+ IS RYN Q  E+SEKLEVMTDPLQAMLLDMVPSL
Sbjct: 1163 KGKVIEQDDLAEFKSNV-----PEIEISTRYNCQGIEESEKLEVMTDPLQAMLLDMVPSL 1222

Query: 301  GMSETKSSSTVLEEKQPPVHNNSEPAKKKVSYKDVASELLKD 319
            GMSETKSSSTVLEEKQ PV NNSEP KKKVSYKDVASELLKD
Sbjct: 1223 GMSETKSSSTVLEEKQ-PVQNNSEPTKKKVSYKDVASELLKD 1254

[Close]

BLAST of Lag0006232 vs. ExPASy TrEMBL
Match: A0A6J1D7W8 (DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 1.5e-92
Identity = 226/342 (66.08%), Postives = 249/342 (72.81%), Query Frame = 0


Query: 1    MDSETPWASKHVSKHIENQKISSPSKVYKDRGRNDAASGQHILSYSTERSSGNKRGRPAA 60
            +DSETP AS++     ENQKISSPS  YKD+GRN+AASGQH+L +STERS G KRG+  A
Sbjct: 924  IDSETPLASENT----ENQKISSPSNAYKDQGRNEAASGQHMLLHSTERSGGKKRGKSTA 983

Query: 61   RSMQKGKSGVEQVRRARARTAKGPAKISEVDSDISDHTDEKTNAETGNIRTLNSEN-SEK 120
            RSMQKGK  VEQVRRARARTAKGPAKISEV+SD SD+ DEKTNAET NI T  SEN    
Sbjct: 984  RSMQKGKLSVEQVRRARARTAKGPAKISEVESDSSDYNDEKTNAETENIGTPCSENLKTN 1043

Query: 121  EFKMLEN------------------ERPDKKKRGRPTT-----RNTQKGKAGVEQVRRTR 180
            E   LEN                  ER  +KKRGR  T     R+ QKGKAGVEQ +RTR
Sbjct: 1044 ELTKLENFDPSRKGKGIEHVPLCSTERTGEKKRGRRPTPTASARSMQKGKAGVEQGQRTR 1103

Query: 181  ARIAKGSGKIGDVESDSSDSTGEKPKAEETGMDKGNIGTVSEENAKTDEFNMLEDRDWKQ 240
            AR AKGS KIG VESDSSD+T +K  AE  G++K NIGTV   N+ T+EF   E+ D   
Sbjct: 1104 ARTAKGSAKIGGVESDSSDTTDDKTNAEGNGVEKRNIGTVCPANSNTNEFIWPENCDSSH 1163

Query: 241  KGKAIEQIDVAEPKSNVQFGKLPEVNISERYNYQDTEKSEKLEVMTDPLQAMLLDMVPSL 300
            KGK IEQ D+AE KSNV     PE+ IS RYN Q  E+SEKLEVMTDPLQAMLLDMVPSL
Sbjct: 1164 KGKVIEQDDLAEFKSNV-----PEIEISTRYNCQGIEESEKLEVMTDPLQAMLLDMVPSL 1223

Query: 301  GMSETKSSSTVLEEKQPPVHNNSEPAKKKVSYKDVASELLKD 319
            GMSETKSSSTVLEEKQ PV NNSEP KKKVSYKDVASELLKD
Sbjct: 1224 GMSETKSSSTVLEEKQ-PVQNNSEPTKKKVSYKDVASELLKD 1255

[Close]

BLAST of Lag0006232 vs. ExPASy TrEMBL
Match: A0A6J1D8A6 (DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 1.5e-92
Identity = 226/342 (66.08%), Postives = 249/342 (72.81%), Query Frame = 0


Query: 1    MDSETPWASKHVSKHIENQKISSPSKVYKDRGRNDAASGQHILSYSTERSSGNKRGRPAA 60
            +DSETP AS++     ENQKISSPS  YKD+GRN+AASGQH+L +STERS G KRG+  A
Sbjct: 924  IDSETPLASENT----ENQKISSPSNAYKDQGRNEAASGQHMLLHSTERSGGKKRGKSTA 983

Query: 61   RSMQKGKSGVEQVRRARARTAKGPAKISEVDSDISDHTDEKTNAETGNIRTLNSEN-SEK 120
            RSMQKGK  VEQVRRARARTAKGPAKISEV+SD SD+ DEKTNAET NI T  SEN    
Sbjct: 984  RSMQKGKLSVEQVRRARARTAKGPAKISEVESDSSDYNDEKTNAETENIGTPCSENLKTN 1043

Query: 121  EFKMLEN------------------ERPDKKKRGRPTT-----RNTQKGKAGVEQVRRTR 180
            E   LEN                  ER  +KKRGR  T     R+ QKGKAGVEQ +RTR
Sbjct: 1044 ELTKLENFDPSRKGKGIEHVPLCSTERTGEKKRGRRPTPTASARSMQKGKAGVEQGQRTR 1103

Query: 181  ARIAKGSGKIGDVESDSSDSTGEKPKAEETGMDKGNIGTVSEENAKTDEFNMLEDRDWKQ 240
            AR AKGS KIG VESDSSD+T +K  AE  G++K NIGTV   N+ T+EF   E+ D   
Sbjct: 1104 ARTAKGSAKIGGVESDSSDTTDDKTNAEGNGVEKRNIGTVCPANSNTNEFIWPENCDSSH 1163

Query: 241  KGKAIEQIDVAEPKSNVQFGKLPEVNISERYNYQDTEKSEKLEVMTDPLQAMLLDMVPSL 300
            KGK IEQ D+AE KSNV     PE+ IS RYN Q  E+SEKLEVMTDPLQAMLLDMVPSL
Sbjct: 1164 KGKVIEQDDLAEFKSNV-----PEIEISTRYNCQGIEESEKLEVMTDPLQAMLLDMVPSL 1223

Query: 301  GMSETKSSSTVLEEKQPPVHNNSEPAKKKVSYKDVASELLKD 319
            GMSETKSSSTVLEEKQ PV NNSEP KKKVSYKDVASELLKD
Sbjct: 1224 GMSETKSSSTVLEEKQ-PVQNNSEPTKKKVSYKDVASELLKD 1255

[Close]

BLAST of Lag0006232 vs. ExPASy TrEMBL
Match: A0A6J1D9Q4 (DNA ligase IV OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 1.5e-92
Identity = 226/342 (66.08%), Postives = 249/342 (72.81%), Query Frame = 0


Query: 1    MDSETPWASKHVSKHIENQKISSPSKVYKDRGRNDAASGQHILSYSTERSSGNKRGRPAA 60
            +DSETP AS++     ENQKISSPS  YKD+GRN+AASGQH+L +STERS G KRG+  A
Sbjct: 901  IDSETPLASENT----ENQKISSPSNAYKDQGRNEAASGQHMLLHSTERSGGKKRGKSTA 960

Query: 61   RSMQKGKSGVEQVRRARARTAKGPAKISEVDSDISDHTDEKTNAETGNIRTLNSEN-SEK 120
            RSMQKGK  VEQVRRARARTAKGPAKISEV+SD SD+ DEKTNAET NI T  SEN    
Sbjct: 961  RSMQKGKLSVEQVRRARARTAKGPAKISEVESDSSDYNDEKTNAETENIGTPCSENLKTN 1020

Query: 121  EFKMLEN------------------ERPDKKKRGRPTT-----RNTQKGKAGVEQVRRTR 180
            E   LEN                  ER  +KKRGR  T     R+ QKGKAGVEQ +RTR
Sbjct: 1021 ELTKLENFDPSRKGKGIEHVPLCSTERTGEKKRGRRPTPTASARSMQKGKAGVEQGQRTR 1080

Query: 181  ARIAKGSGKIGDVESDSSDSTGEKPKAEETGMDKGNIGTVSEENAKTDEFNMLEDRDWKQ 240
            AR AKGS KIG VESDSSD+T +K  AE  G++K NIGTV   N+ T+EF   E+ D   
Sbjct: 1081 ARTAKGSAKIGGVESDSSDTTDDKTNAEGNGVEKRNIGTVCPANSNTNEFIWPENCDSSH 1140

Query: 241  KGKAIEQIDVAEPKSNVQFGKLPEVNISERYNYQDTEKSEKLEVMTDPLQAMLLDMVPSL 300
            KGK IEQ D+AE KSNV     PE+ IS RYN Q  E+SEKLEVMTDPLQAMLLDMVPSL
Sbjct: 1141 KGKVIEQDDLAEFKSNV-----PEIEISTRYNCQGIEESEKLEVMTDPLQAMLLDMVPSL 1200

Query: 301  GMSETKSSSTVLEEKQPPVHNNSEPAKKKVSYKDVASELLKD 319
            GMSETKSSSTVLEEKQ PV NNSEP KKKVSYKDVASELLKD
Sbjct: 1201 GMSETKSSSTVLEEKQ-PVQNNSEPTKKKVSYKDVASELLKD 1232

[Close]

BLAST of Lag0006232 vs. TAIR 10
Match: AT5G57160.1 (DNA ligase IV )

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-08
Identity = 76/296 (25.68%), Postives = 129/296 (43.58%), Query Frame = 0


Query: 53   NKRGRPAARSMQKGKSGVEQVRRARARTAKGPAKISEVDSDISDHTDEKTNAETGNIRTL 112
            + RGR   R++++G+S    ++R + R  K P+KIS  +++ SD ++EK +    +I   
Sbjct: 952  SSRGRSNTRAVKRGRSSTNSLQRVQRRRGKQPSKISGDETEESDASEEKVSTRLSDIAE- 1011

Query: 113  NSENSEKEFKMLENERPDKKKRGRPTTRNTQKGKAGVEQVRRT-RARIAKGSGKIGDVES 172
                        E +   + +R     +  ++GK+ V Q +R  R+R  K + KIG  ES
Sbjct: 1012 ------------ETDSFGEAQRNSSRGKCAKRGKSRVGQTQRVQRSRRGKKAAKIGGDES 1071

Query: 173  DSSDSTGEKPKAEETGMDKGNIGTVSEENAKTDEFNMLEDRDWKQKGKAIEQIDVAEPKS 232
            D +D             ++GN    S EN +T E ++ +  + +Q+   +   +  +   
Sbjct: 1072 DENDELDGNNNV-SADAEEGNAAGRSVENEETREPDIAKYTESQQRDNTVAVEEALQDSR 1131

Query: 233  NVQFGKLPEVNISERYNYQDTEKSEKLEVMTDPLQAMLLDMVPSLGMSETKSSS-TVLEE 292
            N +                + +  EKL++  DPLQAML+ M P      T++S+ T  E 
Sbjct: 1132 NAK---------------TEMDMKEKLQIHEDPLQAMLMKMFPIPSQKTTETSNRTTGEY 1191

Query: 293  KQPPVHNNSEPA----------------------------KKKVSYKDVASELLKD 319
            ++  V    E +                            KKKVSY+DVA ELLKD
Sbjct: 1192 RKANVSGECESSEKRKLDAETDNTSVNAGAESDVVPPLVKKKKVSYRDVAGELLKD 1218

The following BLAST results are available for this feature:

BLAST of Lag0006232 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889084.1	5.9e-99	70.22	DNA ligase 4 isoform X1 [Benincasa hispida]	[more]
XP_038889088.1	5.9e-99	70.22	DNA ligase 4 isoform X4 [Benincasa hispida] >XP_038889089.1 DNA ligase 4 isoform...	[more]
XP_038889086.1	5.9e-99	70.22	DNA ligase 4 isoform X3 [Benincasa hispida] >XP_038889087.1 DNA ligase 4 isoform...	[more]
XP_038889085.1	5.9e-99	70.22	DNA ligase 4 isoform X2 [Benincasa hispida]	[more]
XP_022149864.1	3.1e-92	66.08	DNA ligase 4 isoform X3 [Momordica charantia]	[more]

BLAST of Lag0006232 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LL84	1.4e-07	25.68	DNA ligase 4 OS=Arabidopsis thaliana OX=3702 GN=LIG4 PE=1 SV=1	[more]
Q7X7E9	1.4e-05	25.80	Putative DNA ligase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=LIG4 PE=2 SV=2	[more]

BLAST of Lag0006232 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D962	1.5e-92	66.08	DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1	[more]
A0A6J1D6X8	1.5e-92	66.08	DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1	[more]
A0A6J1D7W8	1.5e-92	66.08	DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1	[more]
A0A6J1D8A6	1.5e-92	66.08	DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1	[more]
A0A6J1D9Q4	1.5e-92	66.08	DNA ligase IV OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1	[more]

BLAST of Lag0006232 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57160.1	1.0e-08	25.68	DNA ligase IV	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0006232.1	Lag0006232.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034645	cellular macromolecule biosynthetic process
biological_process	GO:0006302	double-strand break repair
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003909	DNA ligase activity
molecular_function	GO:0000166	nucleotide binding