Lag0006046 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0006046
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrotrans_gag domain-containing protein
Location	chr6: 36456577 .. 36460280 (+)
RNA-Seq Expression	Lag0006046
Synteny	Lag0006046

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGATCCGCCTAGGGTAAGGTTCGAGCTTGATCCAGAAATCGAGAGGACATTCAAGAGAAGAAGGAGAGAGCAGCGTAGAAACCAAAATTCAATGGCTGACGTGCTGCATCTTCCGCAGGGTCTAGAAGATCCACTTGATCCCAGAATAGTGTGCTGCATCAAAATCTGCAGCTGGAGCAAAATAGACAGCAAAATAATCAGACTAAGAATCCTATCTTGGTGGCAAACGATAGGGTCAGAGCCATTCGAGCGTATGCTTTTCCAATGTTTGATGAGTTGAATCCAGGAATTGTACGTCCTCAAATTGAGGCAGCAAATTTTGAAATGAAGTCGGTAATGTTTCAAATGTTGCAAACCGTGGGTCAATTCCATGGTTTGTCATCTGAAGACCCTCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTGATTTATTTGTAATTCAAGGAGTGTCTAGAGATGCCCTTAGATTAACTTTGTTCTCGTATTCTCTTAGAGATGGAGCAAATGCGTGGTTAAATTATTTTGCTCCAGGATCAATTAGGACATGGAATGAGTTAGCAGAAAAATTCCTTAGTAAATATTTTCCACCAACTAGGAATGCTAAATTGAGGAGTGAAATAGTAGGGTTTAGGCAAGTTGAAGATGAAACTTTTAGTGAGGCTTGGGAGAGGTTTAAGGAGCTTTTGCGAAAGTGTCCCCACCATGGTTTACCTCATTGTATCCAAATGGAAACATTCTACAATGGGTTAAATGGAGCAACCCAAGGTATGGTTGATGCTTCAGCAGGAGGGGCCCTTTTGGAAAAAACTTTAAATGAAGCCCATAAATTTTAGAAAGAATATCAATTAATAGTTTTCAGTGGTCAGATGTTAGAGGCTCAAATAAAAAAAGTTAAGAGTGTGTTAGAGGTTGATGGTGTGTCTACCTTTAGGGCTGATATTGCAATGTTAGCTAACGCTCTTAAAAATGTGACAGTGGTTAGTCATTAGCATGTGTCTATTGTGGTGAAGATCACAACTACGAGTTTTGCCCCAACAATCTAGCTTCTGTGTTTTTTGTAGGTAATCAGAGGAATAACCCTTATTCTAACTTTTATAATCCATGTTGGCGCAACCACCCCAACTTTGCGTGAGGAGGACAAGGAAGTAATGTGCAAGCACAGCAAAAAGTGAACCAATTGGGATTTGCTAAAGCGCAAGTATTGCCCCAGCAAAATAAACAGGTTTTTCCCTAGCAAAATTCAGAGAGTTCTCTTGAGGCAATGATGAAAGAATATATGGCTCGTACAGATGCCGCAATTCAAAGTAATCAAGCTCCAATGAGAGCCCTGGAATTGCAAGTGGGCCAGCTAGCTAATGAGCTGAAGTCAAGGCCTCAAGGGAAACTTCCTTCAGATACTGAACACCCCAGAAGGGAAGGTAAGGAGCAGGTACAGGCAGTGACTCTAAGGAGTGGTAAGCCACTAGAAGAGAGAAAAGAGCCCAGTAAACCCCAGAATGTAGAAACGAATTATGATAAAAATGTTATCGTTGAGAAAGATTTGGAGACTGGTTAGGGTGTTGGAGACAACAATAATGATGTTGGAGCATTTGGTTCTGTTCTAGATGTGGAACCACCTTATGTGCCGCCCCCGCCTTATCTACCACCTCTACCTTTTCCACAAAGGCAAAGGCCTAAGAATCATGATGGTCAATTTAAGAAGTTTTTAGAGATTCTTAAGCAATTGCATATAAATATCCCTTTGGTAGAAGCTATAGAGAAAATGCCTAATTATGCTAAATTTCTTAAGGATATTTTAACTAAAAAGAAGAGGTTAGATGAGTTTGAAACTGTATCTCTTACTGAGGAATGTAGTGCTATTCTCAAGAATGGGTTACCAACCAAGGCTAAGGATCTAGGGTCATTCACACTACTACAAAATTGAGAATCCATGACACCAAGGGATGAAGAAATAAAGTTAAGGGATGAGAAAAAAATGTCATAAAATGTAAAAGGCGCGTTTTTGGCGGGCAAAAACGGAGTTTTACGTATTTTCGAAAATTTATGACCTTTTTTAAATGTCATAAATTTATGACGTTTTTTAAATGTCTTAAATTTATGACTTGGATTAAGTGTCATTAATTAAAAATAATTTATTTTTATTTTTGTATTTTTATTTACAAAATAAATTTTAAAATAAAAAGCTTAATCGTCACTCTCACACCCTTGCCCCTCGAATGCCCTACGTCATAAAATTGAGCTAATTCTAGATCATTTGGGTTTATTTCTTAAAGTTTAATCTAGAAGTTAAAGCTTGTCGTTAAGTTCATAAATTTAGGGAAAAGAGATTTTTATTAAATATTTAATTCTCAAATCTTGACATTTTAATTTTGTATCCTTATTGTCTAAGTTTAAAGGAAATCAAATTTCCTCCTTCCTCTTCTCCAACGAGTAGCTCGACGGCGCGGGAATATAACTCCAACGCTTCCTCTACAGCGTTTGCTTTAGTCCTTTGGCGGGGCTCTCTGTAACGTCCCACATTTCAAAATCAAACTATTTTTAGATTTGTCAAGCTTTCTTATTCTAATTTGGATAATTAGAATTTAAGTTTAGCCTTGGGTCGTTAAATAAAATTTCTATAATTTAGGGAAAAGAAATTTTTAATTAAATCTTTAAATTCCTAAAGTTTGGAGGTTTAATATTTGATATTTATTTTAAATATCAAAAGACCCAAAACCCAAATCAATTGGGTTATTTTCTTTCCCAAATAATTTAGGAATAAAGTTTGGGATTTAAATTAAAATCTCAGATAAAGTCTAATTCCTAATTAAATTGGGATTCTTATTCTTGGGTTTTATTTAATCTAAGAAAGGGGATTTTTTATTCAATAAAAGAAAAAGAAAAAAAAACTAAAAGAAAACCCTAACTCTTCCTCCCTTTCTTCATCTTCCTCGTGCAACCCCCCACAACTTCTTCTTGTCGTGATTTTCAGCCAGCGCCGCCGTCGAAGTGTAGCACTGTCGCCTCGCCGGAGTTGTTGCACCGTCGTTCAGTCGCCGTCAGTAGTAGCTCGAGCGTTGCCGTGGGTTTTTTCTCCCGTGTGTGTGTCTCTCTCTCCACGATCTCTCTCTCTCTCTGTCACCACGCCGCCCGTTCTTCCTTCATCCTCTTCGAGCTGCCACTACTCTTTGCCGGAAAGGGGGACTCGAGTGACGCCCAACCTGTGAGAGCTCAATCGATCGACGCCAGCCCTTTTCACACGTAGTTCTACCTTTCTTTCTCTGTGGTTTTCAGCCAAGAACTTGGCTCATGCGTAAGTTCTCTTTTCCTCTCTTGTTCCTAGTCGATTTAAGGCCCGATCTAAATGTATCTTGGTTCGATTCGTTAGATCTCGCGTCCTAGCAGCTTGAAGCCTCAGTTTCACACGATTTCGCCTCTGTCCAGAGGTGTTTTGTCTCCATTTAGGATCGTTACGACGTCGCTTAACGTTTCCGGTAAGTTTTTAACTCTTACCCATTCATGGTTAGAGCTTAAATTAGAATACCCACTCTATTCCGACGACGGTGATCGGGTTTTTGACGATTCAGGTTGTTGTCCAACGAAGAGTTTCCTAGTTTTTGGTGAGTTCTTCTTGTTTAGCTTTCCCTGTTGGGGATGATGTTATTGACCCATGTAGTTGTGTTCCGTTTCAGCAACTAACCACAAAATTCGAGTTCTAA

mRNA sequence

ATGAGTGATCCGCCTAGGCTGGAGCAAAATAGACAGCAAAATAATCAGACTAAGAATCCTATCTTGGTGGCAAACGATAGGGTCAGAGCCATTCGAGCGTATGCTTTTCCAATGTTTGATGAGTTGAATCCAGGAATTGTACGTCCTCAAATTGAGGCAGCAAATTTTGAAATGAAGTCGGTAATGTTTCAAATGTTGCAAACCGTGGGTCAATTCCATGGTTTGTCATCTGAAGACCCTCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTGATTTATTTGTAATTCAAGGAGTGTCTAGAGATGCCCTTAGATTAACTTTGTTCTCGTATTCTCTTAGAGATGGAGCAAATGCGTGGTTAAATTATTTTGCTCCAGGATCAATTAGGACATGGAATGAGTTAGCAGAAAAATTCCTTAGTAAATATTTTCCACCAACTAGGAATGCTAAATTGAGGAGTGAAATAGTAGGGTTTAGGCAAGTTGAAGATGAAACTTTTAGTGAGGCTTGGGAGAGGTTTAAGGAGCTTTTGCGAAAGTGTCCCCACCATGGTTTACCTCATTGTATCCAAATGGAAACATTCTACAATGGGTTAAATGGAGCAACCCAAGATGCCGCAATTCAAAGTAATCAAGCTCCAATGAGAGCCCTGGAATTGCAAGTGGGCCAGCTAGCTAATGAGCTGAAGTCAAGGCCTCAAGGGAAACTTCCTTCAGATACTGAACACCCCAGAAGGGAAGGTAAGGAGCAGGGTGTTGGAGACAACAATAATGATGTTGGAGCATTTGGTTCTGTTCTAGATGTGGAACCACCTTATGTGCCGCCCCCGCCTTATCTACCACCTCTACCTTTTCCACAAAGGCAAAGGCCTAAGAATCATGATGGTCAATTTAAGAAGTTTTTAGAGATTCTTAAGCAATTGCATATAAATATCCCTTTGGTAGAAGCTATAGAGAAAATGCCTAATTATGCTAAATTTCTTAAGGATATTTTAACTAAAAAGAAGAGGTTAGATGAGTTTGAAACTGTATCTCTTACTGAGGAATGTAGTGCTATTCTCAAGAATGGGTTACCAACCAAGGCTAAGGATCTAGGCCAGCGCCGCCGTCGAAGTGTAGCACTGTCGCCTCGCCGGAGTTGTTGCACCGTCGTTCAGTCGCCGTCAGTAGTAGCTCGAGCGTTGCCGTGGGTTTTTTCTCCCGTGTGTGTGTCTCTCTCTCCACGATCTCTCTCTCTCTCTGTCACCACGCCGCCCGTTCTTCCTTCATCCTCTTCGAGCTGCCACTACTCTTTGCCGGAAAGGGGGACTCGAGTGACGCCCAACCTCCAAGAACTTGGCTCATGCATCTCGCGTCCTAGCAGCTTGAAGCCTCAGTTTCACACGATTTCGCCTCTGTCCAGAGGTGTTTTGTCTCCATTTAGGATCGTTACGACGTCGCTTAACGTTTCCGCTTTCCCTGTTGGGGATGATGTTATTGACCCATGTAGTTGTGTTCCGTTTCAGCAACTAACCACAAAATTCGAGTTCTAA

Coding sequence (CDS)

ATGAGTGATCCGCCTAGGCTGGAGCAAAATAGACAGCAAAATAATCAGACTAAGAATCCTATCTTGGTGGCAAACGATAGGGTCAGAGCCATTCGAGCGTATGCTTTTCCAATGTTTGATGAGTTGAATCCAGGAATTGTACGTCCTCAAATTGAGGCAGCAAATTTTGAAATGAAGTCGGTAATGTTTCAAATGTTGCAAACCGTGGGTCAATTCCATGGTTTGTCATCTGAAGACCCTCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTGATTTATTTGTAATTCAAGGAGTGTCTAGAGATGCCCTTAGATTAACTTTGTTCTCGTATTCTCTTAGAGATGGAGCAAATGCGTGGTTAAATTATTTTGCTCCAGGATCAATTAGGACATGGAATGAGTTAGCAGAAAAATTCCTTAGTAAATATTTTCCACCAACTAGGAATGCTAAATTGAGGAGTGAAATAGTAGGGTTTAGGCAAGTTGAAGATGAAACTTTTAGTGAGGCTTGGGAGAGGTTTAAGGAGCTTTTGCGAAAGTGTCCCCACCATGGTTTACCTCATTGTATCCAAATGGAAACATTCTACAATGGGTTAAATGGAGCAACCCAAGATGCCGCAATTCAAAGTAATCAAGCTCCAATGAGAGCCCTGGAATTGCAAGTGGGCCAGCTAGCTAATGAGCTGAAGTCAAGGCCTCAAGGGAAACTTCCTTCAGATACTGAACACCCCAGAAGGGAAGGTAAGGAGCAGGGTGTTGGAGACAACAATAATGATGTTGGAGCATTTGGTTCTGTTCTAGATGTGGAACCACCTTATGTGCCGCCCCCGCCTTATCTACCACCTCTACCTTTTCCACAAAGGCAAAGGCCTAAGAATCATGATGGTCAATTTAAGAAGTTTTTAGAGATTCTTAAGCAATTGCATATAAATATCCCTTTGGTAGAAGCTATAGAGAAAATGCCTAATTATGCTAAATTTCTTAAGGATATTTTAACTAAAAAGAAGAGGTTAGATGAGTTTGAAACTGTATCTCTTACTGAGGAATGTAGTGCTATTCTCAAGAATGGGTTACCAACCAAGGCTAAGGATCTAGGCCAGCGCCGCCGTCGAAGTGTAGCACTGTCGCCTCGCCGGAGTTGTTGCACCGTCGTTCAGTCGCCGTCAGTAGTAGCTCGAGCGTTGCCGTGGGTTTTTTCTCCCGTGTGTGTGTCTCTCTCTCCACGATCTCTCTCTCTCTCTGTCACCACGCCGCCCGTTCTTCCTTCATCCTCTTCGAGCTGCCACTACTCTTTGCCGGAAAGGGGGACTCGAGTGACGCCCAACCTCCAAGAACTTGGCTCATGCATCTCGCGTCCTAGCAGCTTGAAGCCTCAGTTTCACACGATTTCGCCTCTGTCCAGAGGTGTTTTGTCTCCATTTAGGATCGTTACGACGTCGCTTAACGTTTCCGCTTTCCCTGTTGGGGATGATGTTATTGACCCATGTAGTTGTGTTCCGTTTCAGCAACTAACCACAAAATTCGAGTTCTAA

Protein sequence

MSDPPRLEQNRQQNNQTKNPILVANDRVRAIRAYAFPMFDELNPGIVRPQIEAANFEMKSVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDLFVIQGVSRDALRLTLFSYSLRDGANAWLNYFAPGSIRTWNELAEKFLSKYFPPTRNAKLRSEIVGFRQVEDETFSEAWERFKELLRKCPHHGLPHCIQMETFYNGLNGATQDAAIQSNQAPMRALELQVGQLANELKSRPQGKLPSDTEHPRREGKEQGVGDNNNDVGAFGSVLDVEPPYVPPPPYLPPLPFPQRQRPKNHDGQFKKFLEILKQLHINIPLVEAIEKMPNYAKFLKDILTKKKRLDEFETVSLTEECSAILKNGLPTKAKDLGQRRRRSVALSPRRSCCTVVQSPSVVARALPWVFSPVCVSLSPRSLSLSVTTPPVLPSSSSSCHYSLPERGTRVTPNLQELGSCISRPSSLKPQFHTISPLSRGVLSPFRIVTTSLNVSAFPVGDDVIDPCSCVPFQQLTTKFEF

Homology

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BLAST of Lag0006046 vs. NCBI nr
Match: XP_030505184.1 (uncharacterized protein LOC115720166 [Cannabis sativa])

HSP 1 Score: 359.8 bits (922), Expect = 4.0e-95
Identity = 229/581 (39.41%), Postives = 271/581 (46.64%), Query Frame = 0


Query: 16  QTKNPILVANDRVRAIRAYAFPMFDELNPGIVRPQIEAANFEMKSVMFQMLQTVGQFHGL 75
           Q  +PI++ +DR RAIR YA PMF+ELNPGIVRP+I+A  FE+K VMFQMLQTVGQF  +
Sbjct: 13  QIVSPIILVDDRARAIREYAAPMFNELNPGIVRPEIQAPQFELKPVMFQMLQTVGQFSEM 72

Query: 76  SSEDPHLHLKSFLGVSDLFVIQGVSRDALRLTLFSYSLRDGANAWLNYFAPGSIRTWNEL 135
            +EDPHLHL+SFL +SD F IQGVS +  RL LF +SLRD A +WLN  +P S+  WN+ 
Sbjct: 73  PTEDPHLHLRSFLEMSDSFKIQGVSEEVRRLKLFPFSLRDRARSWLNTLSPDSVTNWNDF 132

Query: 136 AEKFLSKYFPPTRNAKLRSEIVGFRQVEDETFSEAWERFKELLRKCPHHGLPHCIQMETF 195
           AEKFL KYFPPTRNAK RSEI+ F Q+EDE+ S+AWERFKELLRKCPHHG+PHCIQMETF
Sbjct: 133 AEKFLRKYFPPTRNAKFRSEIMSFHQLEDESASDAWERFKELLRKCPHHGIPHCIQMETF 192

Query: 196 YNGLNGATQ--------------------------------------------------- 255
           YNGLN  +Q                                                   
Sbjct: 193 YNGLNATSQMVLDASANGAILSKSYNEAFEILETIASNNYQWSNTRAPGSRKVAGVLEVD 252

Query: 256 ------------------------------------------------------------ 315
                                                                       
Sbjct: 253 AITALTTQMASMTNVLKNLSIGNSKNIQPAAAIQSDDVSCVFCREGHAFEKCPSNPESVC 312

Query: 316 ------------------------------------------------------------ 367
                                                                       
Sbjct: 313 YMGNQNFNRNNGAFSNSYNQAWKNHPNLSWGSRSKLKHFDQGRQAYPPGFSQQLRHPQHA 372

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BLAST of Lag0006046 vs. NCBI nr
Match: XP_030508947.1 (uncharacterized protein LOC115723603 [Cannabis sativa])

HSP 1 Score: 342.0 bits (876), Expect = 8.6e-90
Identity = 216/525 (41.14%), Postives = 264/525 (50.29%), Query Frame = 0


Query: 19  NPILVANDRVRAIRAYAFPMFDELNPGIVRPQIEAANFEMKSVMFQMLQTVGQFHGLSSE 78
           NPI +A+DR RA R YA  +F+ELNPG VRP+I+A +FE+K VMFQMLQ VGQF G   E
Sbjct: 15  NPIALADDRARAKREYATLVFNELNPGTVRPEIQAPHFELKPVMFQMLQRVGQFSGSPME 74

Query: 79  DPHLHLKSFLGVSDLFVIQGVSRDALRLTLFSYSLRDGANAWLNYFAPGSIRTWNELAEK 138
           DPHLH++SF  VSD F  QGVS +ALRL LF +SLRD A AWLN   P  + +WN+LAEK
Sbjct: 75  DPHLHIRSFFEVSDSFKQQGVSEEALRLKLFPFSLRDRARAWLNTLPPDPVTSWNDLAEK 134

Query: 139 FLSKYFPPTRNAKLRSEIVGFRQVEDETFSEAWERFKELLRKCPHHGLPHCIQMETFYNG 198
           FL KYFPPTRNA  RSEI+ F+Q+EDET S+AWERFKELLRKCPHHG+PHCIQ+ETFYNG
Sbjct: 135 FLRKYFPPTRNANFRSEIMSFQQLEDETASDAWERFKELLRKCPHHGIPHCIQLETFYNG 194

Query: 199 LNGATQ-------DAAIQS----------------------NQAP-------------MR 258
           LN A++       D AI S                      N+AP             + 
Sbjct: 195 LNAASRMVLDASADGAILSKSYNEAFEILEMIARNNYQWSTNRAPTSQKVAGVLKVDALT 254

Query: 259 ALELQVGQLANELK---------------------------------------------- 318
           AL  Q+  + N LK                                              
Sbjct: 255 ALTAQMASMTNILKNMNMGGSVQPAAAIQRAKISCVYCGDGHTFENYPSNPASHHPNFSW 314

Query: 319 -------------------------------------------------------SRPQG 367
                                                                  +RPQG
Sbjct: 315 GGQRASSSGAQAQGKQSFPPGFSQQPRPQQPHQPQGSQTSSLESLMRDYMAKNDANRPQG 374

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BLAST of Lag0006046 vs. NCBI nr
Match: XP_017233063.1 (PREDICTED: uncharacterized protein LOC108207110 [Daucus carota subsp. sativus])

HSP 1 Score: 334.7 bits (857), Expect = 1.4e-87
Identity = 214/562 (38.08%), Postives = 261/562 (46.44%), Query Frame = 0


Query: 23  VANDRVRAIRAYAFPMFDELNPGIVRPQIEAANFEMKSVMFQMLQTVGQFHGLSSEDPHL 82
           + +D+ RAIR YA P F+ELN GI+RP I+A  FE+K VMFQMLQT+GQF G+ +EDPHL
Sbjct: 54  IVDDKDRAIRQYAAPRFEELNSGIIRPNIQATQFELKPVMFQMLQTIGQFSGMPTEDPHL 113

Query: 83  HLKSFLGVSDLFVIQGVSRDALRLTLFSYSLRDGANAWLNYFAPGSIRTWNELAEKFLSK 142
           HL+ F+ +SD F  QGV  DALRL LF YS+RD A  WLN    GS+ TWN+L EKFLSK
Sbjct: 114 HLRLFMEISDSFKFQGVPEDALRLKLFPYSVRDRARTWLNSLPAGSVTTWNDLTEKFLSK 173

Query: 143 YFPPTRNAKLRSEIVGFRQVEDETFSEAWERFKELLRKCPHHGLPHCIQMETFYNGLNGA 202
           YFPP  NAKLR+EI  F+Q +DE+  +AWERFKELLRKCPHHG+ HCIQMETFYNGLN  
Sbjct: 174 YFPPNMNAKLRNEINSFQQQDDESLYDAWERFKELLRKCPHHGILHCIQMETFYNGLNAQ 233

Query: 203 TQ---------------------------------------------------------- 262
           T+                                                          
Sbjct: 234 TKMVVDASANGALLSKSYNQAYEILETIATKNYQWSSSRAQTGKKVAGIYDVDSITSMKA 293

Query: 263 ------------------------------------------------------------ 322
                                                                       
Sbjct: 294 QLASMEHMLKNLSMGNNQSKEQSLSSQINQTKNVSCVFCGEAHTYDSCPSNPESVFYMGN 353

Query: 323 ------------------------------------------------------------ 367
                                                                       
Sbjct: 354 QNKAGPYSNTYNQSWRQHPNFSWSNQGANSGTSTGNVKSNYPPGFSQQAPQSNSLENMLK 413

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BLAST of Lag0006046 vs. NCBI nr
Match: XP_030497803.1 (uncharacterized protein LOC115713460 [Cannabis sativa])

HSP 1 Score: 328.6 bits (841), Expect = 9.8e-86
Identity = 206/530 (38.87%), Postives = 248/530 (46.79%), Query Frame = 0


Query: 19  NPILVANDRVRAIRAYAFPMFDELNPGIVRPQIEAANFEMKSVMFQMLQTVGQFHGLSSE 78
           NPI +A+DR RAIR YA PMF+ELNPGIVRP+I+A +FE+K VMFQMLQTVGQF G  +E
Sbjct: 15  NPIALADDRTRAIREYAAPMFNELNPGIVRPEIQAPHFELKPVMFQMLQTVGQFGGSPTE 74

Query: 79  DPHLHLKSFLGVSDLFVIQGVSRDALRLTLFSYSLRDGANAWLNYFAPGSIRTWNELAEK 138
           DPHLH++SFL VSD F +QGVS +ALRL LF +SLRD A AWLN   P S+  WN+LAEK
Sbjct: 75  DPHLHIRSFLEVSDSFKLQGVSEEALRLKLFPFSLRDRARAWLNTLPPDSVTNWNDLAEK 134

Query: 139 FLSKYFPPTRNAKLRSEIVGFRQVEDETFSEAWERFKELLRKCPHHGLPHCIQMETFYNG 198
           FL KYFPPTRNAK RSEI+ F+Q EDET S+AWERFKELLRKCPHHG+PHCIQ+ETFYNG
Sbjct: 135 FLRKYFPPTRNAKFRSEIMSFQQSEDETTSDAWERFKELLRKCPHHGIPHCIQLETFYNG 194

Query: 199 LNGATQ------------------------------------------------------ 258
           LN A++                                                      
Sbjct: 195 LNAASRMVLDASANGAILSKSYNEAFEILERIASNNYQWSTNRAHTSRKVAGVLEVDALT 254

Query: 259 ------------------------------------------------------------ 318
                                                                       
Sbjct: 255 ALTAQMASMTNILKNMNMGGSVQPAAAIQRAKNSCVYCGDGHTFENCPSNLASVCYVGNQ 314

Query: 319 ------------------------------------------------------------ 331
                                                                       
Sbjct: 315 NFNRNNNPYSNSYNPAWKHHPNFSWGGQGKQSFPPGFSQQPRPQQPHQPQGSQTSSLESL 374

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BLAST of Lag0006046 vs. NCBI nr
Match: XP_022929949.1 (uncharacterized protein LOC111436411 [Cucurbita moschata])

HSP 1 Score: 313.9 bits (803), Expect = 2.5e-81
Identity = 207/572 (36.19%), Postives = 253/572 (44.23%), Query Frame = 0


Query: 13  QNNQTKNPILVANDRVRAIRAYAFPMFDELNPGIVRPQIEAANFEMKSVMFQMLQTVGQF 72
           Q   T NPI +A+DR RAIRAYA P  +ELNP I+RP+I+   FE+K VMFQMLQT+GQF
Sbjct: 56  QERITANPIHLADDRERAIRAYAHPAVEELNPCIIRPEIQGTTFELKPVMFQMLQTIGQF 115

Query: 73  HGLSSEDPHLHLKSFLGV-------SDLFVIQGVSRDALRLTLFSYSLRDGANAWLNYFA 132
           HGL  EDPHLHLKSFLGV       SD F  QGV +D +RL+LF Y LRDGA +WLN  A
Sbjct: 116 HGLPLEDPHLHLKSFLGVSDSFRFHSDSFRFQGVDKDMIRLSLFPYLLRDGAKSWLNTLA 175

Query: 133 PGSIRTWNELAEKFLSKYFPPTRNAKLRSEIVGFRQVEDETFSEAWERFKELLRKCPHHG 192
           PG+I +WN LAE FL KYFPPTRNA+ ++EIV F+Q EDET SEA ERFKE+LRKCPHHG
Sbjct: 176 PGTIDSWNSLAENFLIKYFPPTRNARFKNEIVTFQQFEDETLSEACERFKEMLRKCPHHG 235

Query: 193 LPHCIQMETFYNGLN--------------------------------------------- 252
           LPHCIQMETFYNGLN                                             
Sbjct: 236 LPHCIQMETFYNGLNIVTKQVVDASANGAILSKTYNEAYEILERIASNNCQWADVRSNPG 295

Query: 253 ------------------------------------------------------------ 312
                                                                       
Sbjct: 296 RKTRGVLEVDALSSINAQLASVTNILQNLALGQDSMIKAPVHTAAAINQTAAESCVYCGE 355

Query: 313 ------------------------------------------------------------ 367
                                                                       
Sbjct: 356 EHTFDQCPSNPASIFYVGNQASQGNLKNNPFSNTYNPGWRNHPNFSWKGQSLYNQQMPPK 415

[Close]

BLAST of Lag0006046 vs. ExPASy TrEMBL
Match: A0A6J1EQ90 (uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC111436411 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.2e-81
Identity = 207/572 (36.19%), Postives = 253/572 (44.23%), Query Frame = 0


Query: 13  QNNQTKNPILVANDRVRAIRAYAFPMFDELNPGIVRPQIEAANFEMKSVMFQMLQTVGQF 72
           Q   T NPI +A+DR RAIRAYA P  +ELNP I+RP+I+   FE+K VMFQMLQT+GQF
Sbjct: 56  QERITANPIHLADDRERAIRAYAHPAVEELNPCIIRPEIQGTTFELKPVMFQMLQTIGQF 115

Query: 73  HGLSSEDPHLHLKSFLGV-------SDLFVIQGVSRDALRLTLFSYSLRDGANAWLNYFA 132
           HGL  EDPHLHLKSFLGV       SD F  QGV +D +RL+LF Y LRDGA +WLN  A
Sbjct: 116 HGLPLEDPHLHLKSFLGVSDSFRFHSDSFRFQGVDKDMIRLSLFPYLLRDGAKSWLNTLA 175

Query: 133 PGSIRTWNELAEKFLSKYFPPTRNAKLRSEIVGFRQVEDETFSEAWERFKELLRKCPHHG 192
           PG+I +WN LAE FL KYFPPTRNA+ ++EIV F+Q EDET SEA ERFKE+LRKCPHHG
Sbjct: 176 PGTIDSWNSLAENFLIKYFPPTRNARFKNEIVTFQQFEDETLSEACERFKEMLRKCPHHG 235

Query: 193 LPHCIQMETFYNGLN--------------------------------------------- 252
           LPHCIQMETFYNGLN                                             
Sbjct: 236 LPHCIQMETFYNGLNIVTKQVVDASANGAILSKTYNEAYEILERIASNNCQWADVRSNPG 295

Query: 253 ------------------------------------------------------------ 312
                                                                       
Sbjct: 296 RKTRGVLEVDALSSINAQLASVTNILQNLALGQDSMIKAPVHTAAAINQTAAESCVYCGE 355

Query: 313 ------------------------------------------------------------ 367
                                                                       
Sbjct: 356 EHTFDQCPSNPASIFYVGNQASQGNLKNNPFSNTYNPGWRNHPNFSWKGQSLYNQQMPPK 415

[Close]

BLAST of Lag0006046 vs. ExPASy TrEMBL
Match: A0A6J1H7E4 (uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC111461168 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.4e-77
Identity = 144/222 (64.86%), Postives = 168/222 (75.68%), Query Frame = 0


Query: 7   LEQNRQQNNQTKNPILVAN-------------DRVRAIRAYAFPMFDELNPGIVRPQIEA 66
           ++Q  Q N + +NP+++AN             DR RAIRAYA P  DELNP I+RP+++A
Sbjct: 6   IQQMAQLNQEFENPVMMANQERIIANAIQLADDRERAIRAYAHPAVDELNPCIIRPEMQA 65

Query: 67  ANFEMKSVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDLFVIQGVSRDALRLTLFSYSL 126
             FE+K VMFQMLQT+GQFHGL SEDPHLHLKSFLGVSD F  QGV +D +RL+LF YSL
Sbjct: 66  TTFELKPVMFQMLQTIGQFHGLPSEDPHLHLKSFLGVSDSFRFQGVDKDVIRLSLFPYSL 125

Query: 127 RDGANAWLNYFAPGSIRTWNELAEKFLSKYFPPTRNAKLRSEIVGFRQVEDETFSEAWER 186
           RDGA +WLN  AP +I +WN LAEKFL KYFPPTRNA+ R+EIV F+Q EDET SEAWER
Sbjct: 126 RDGAKSWLNTLAPRTIDSWNSLAEKFLIKYFPPTRNARFRNEIVAFQQFEDETLSEAWER 185

Query: 187 FKELLRKCPHHGLPHCIQMETFYNGLNGATQDAAIQSNQAPM 216
           FKE+LRKCPHHGLPHCIQMETFYNGLN AT+     S    M
Sbjct: 186 FKEMLRKCPHHGLPHCIQMETFYNGLNIATKQVVDASANGAM 227

[Close]

BLAST of Lag0006046 vs. ExPASy TrEMBL
Match: U5CUI2 (Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMTR_s04947p00003620 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 4.5e-76
Identity = 136/189 (71.96%), Postives = 159/189 (84.13%), Query Frame = 0


Query: 16  QTKNPILVANDRVRAIRAYAFPMFDELNPGIVRPQIEAANFEMKSVMFQMLQTVGQFHGL 75
           Q  NPI++A+DR RAIR YA PMF+ELNPGIVRP+I+A  FE+K VMFQMLQTVGQF G+
Sbjct: 8   QIVNPIILADDRARAIREYAAPMFNELNPGIVRPEIQAPQFELKPVMFQMLQTVGQFSGM 67

Query: 76  SSEDPHLHLKSFLGVSDLFVIQGVSRDALRLTLFSYSLRDGANAWLNYFAPGSIRTWNEL 135
            +EDPHLHL+SFL VSD F IQGVS + LRL LF +SLRD A +WLN   P S+  WN+L
Sbjct: 68  PTEDPHLHLRSFLEVSDSFKIQGVSEEVLRLKLFPFSLRDRARSWLNTLPPDSVTNWNDL 127

Query: 136 AEKFLSKYFPPTRNAKLRSEIVGFRQVEDETFSEAWERFKELLRKCPHHGLPHCIQMETF 195
           AEKFL KYFPPTRNAK RSEI+ F+Q+EDE+ S+AWERFKELLRKCPHHG+PHCIQMETF
Sbjct: 128 AEKFLRKYFPPTRNAKFRSEIMSFQQLEDESTSDAWERFKELLRKCPHHGIPHCIQMETF 187

Query: 196 YNGLNGATQ 205
           YNGLN A++
Sbjct: 188 YNGLNAASR 196

[Close]

BLAST of Lag0006046 vs. ExPASy TrEMBL
Match: A0A6J1G7Q6 (uncharacterized protein LOC111451598 OS=Cucurbita moschata OX=3662 GN=LOC111451598 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.1e-74
Identity = 136/192 (70.83%), Postives = 158/192 (82.29%), Query Frame = 0


Query: 13  QNNQTKNPILVANDRVRAIRAYAFPMFDELNPGIVRPQIEAANFEMKSVMFQMLQTVGQF 72
           Q   T N I VA+DR RAIRAYA P  +ELNP I+RP+++A  FE+K VMFQMLQT+GQF
Sbjct: 4   QERITANAIHVADDRERAIRAYAHPAVEELNPCIIRPEMQATTFELKPVMFQMLQTIGQF 63

Query: 73  HGLSSEDPHLHLKSFLGVSDLFVIQGVSRDALRLTLFSYSLRDGANAWLNYFAPGSIRTW 132
           HGLSS+DPHLHLKSFLGVSD F  QGV +D +RL+ FSYSLRDGA +WLN  A G I +W
Sbjct: 64  HGLSSKDPHLHLKSFLGVSDSFRFQGVDKDVIRLSFFSYSLRDGAKSWLNILALGIIDSW 123

Query: 133 NELAEKFLSKYFPPTRNAKLRSEIVGFRQVEDETFSEAWERFKELLRKCPHHGLPHCIQM 192
           N LAEKFL KYFPPTR+A+ R+EIV F++ E+ET SEAWERFKE LRKCPHHGLPHCIQ+
Sbjct: 124 NSLAEKFLFKYFPPTRSARFRNEIVAFQKFENETLSEAWERFKETLRKCPHHGLPHCIQI 183

Query: 193 ETFYNGLNGATQ 205
           ETFYNGLN AT+
Sbjct: 184 ETFYNGLNTATK 195

[Close]

BLAST of Lag0006046 vs. ExPASy TrEMBL
Match: A0A6J1G7Q6 (uncharacterized protein LOC111451598 OS=Cucurbita moschata OX=3662 GN=LOC111451598 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.4e-07
Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 202 ATQDAAIQSNQAPMRALELQVGQLANELKSRPQGKLPSDTEHPRREGKE 251
           A  DA IQS Q  +R LE+QVGQLANEL++RP GKLP+DTE P+REG E
Sbjct: 403 ARNDAVIQSQQVSLRNLEVQVGQLANELRNRPLGKLPTDTEMPKREGME 451

HSP 2 Score: 290.0 bits (741), Expect = 1.9e-74
Identity = 136/192 (70.83%), Postives = 157/192 (81.77%), Query Frame = 0


Query: 13  QNNQTKNPILVANDRVRAIRAYAFPMFDELNPGIVRPQIEAANFEMKSVMFQMLQTVGQF 72
           Q   T N I +A+DR RAIRAYA P  +ELNP I+RP+++A  FE+K VMFQMLQT+GQF
Sbjct: 34  QERITANAIHLADDRERAIRAYAHPAVEELNPCIIRPEMQATTFELKPVMFQMLQTIGQF 93

Query: 73  HGLSSEDPHLHLKSFLGVSDLFVIQGVSRDALRLTLFSYSLRDGANAWLNYFAPGSIRTW 132
           HGL SEDPHLHLKSFLGVSD F  Q V +D +RL+LF YSLRDGA +WLN  A G+I +W
Sbjct: 94  HGLPSEDPHLHLKSFLGVSDSFRFQRVDKDVIRLSLFPYSLRDGAKSWLNTLALGTIDSW 153

Query: 133 NELAEKFLSKYFPPTRNAKLRSEIVGFRQVEDETFSEAWERFKELLRKCPHHGLPHCIQM 192
           N L EKFL KYFPPTRNA+ R+EIV F+Q ED+T SEAWERFKE+LRKCPHHGLPHCIQM
Sbjct: 154 NSLVEKFLIKYFPPTRNARFRNEIVVFQQFEDDTLSEAWERFKEMLRKCPHHGLPHCIQM 213

Query: 193 ETFYNGLNGATQ 205
           ETFYNGLN AT+
Sbjct: 214 ETFYNGLNIATK 225

The following BLAST results are available for this feature:

BLAST of Lag0006046 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_030505184.1	4.0e-95	39.41	uncharacterized protein LOC115720166 [Cannabis sativa]	[more]
XP_030508947.1	8.6e-90	41.14	uncharacterized protein LOC115723603 [Cannabis sativa]	[more]
XP_017233063.1	1.4e-87	38.08	PREDICTED: uncharacterized protein LOC108207110 [Daucus carota subsp. sativus]	[more]
XP_030497803.1	9.8e-86	38.87	uncharacterized protein LOC115713460 [Cannabis sativa]	[more]
XP_022929949.1	2.5e-81	36.19	uncharacterized protein LOC111436411 [Cucurbita moschata]	[more]

BLAST of Lag0006046 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0006046 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQ90	1.2e-81	36.19	uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC1114364...	[more]
A0A6J1H7E4	2.4e-77	64.86	uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]
U5CUI2	4.5e-76	71.96	Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMT...	[more]
A0A6J1G7Q6	1.1e-74	70.83	uncharacterized protein LOC111451598 OS=Cucurbita moschata OX=3662 GN=LOC1114515...	[more]
A0A6J1G7Q6	4.4e-07	67.35	uncharacterized protein LOC111451598 OS=Cucurbita moschata OX=3662 GN=LOC1114515...	[more]

BLAST of Lag0006046 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 108..200 e-value: 2.3E-19 score: 69.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..261
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 284..366 coord: 81..208
None	No IPR available	PANTHER	PTHR24559:SF334	SUBFAMILY NOT NAMED	coord: 284..366 coord: 81..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0006046.1	Lag0006046.1	mRNA