Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCTGCAGGTGGTACTTTTTGTCCAAGACCGTGGAGAACGTGCGCACACTACTAAGGGATATGGCCACCAACAGTTATCAGTGGCAATCTGAGCGGTCTGCACTGAAAAAGATTACCGTTGGAGTGTTTGAAATCGATAATGTAAGTGCACTTTAAGCCCAGATGTCTTCCCTTGCTAATGCTTTTCTAAAATTTTTCAGATACAGGGAGTGCTCAATCGATCGAGTCTGCAGCTGCCTTTGCATCTCAGTTTCAAGAGGCGACTTTCGAACAGGTTCAATATGTTTCTAATTTTAATTATAGGGGATATAGTAATAATTCTACACCTACACATCATCACCCTAGCAATATAAATCATGAGAACTTCTCGTATGCTAATAATAAAAATATTTTAAATCCTCTTGGTTTTGCCCCTCCTAAGCAAGAAAGTAAACAATCGTTAGAGGATCTAGTTGGAGCTTTCATTGCAGAATCTAGCAACAGGACGAACAAGCTTGAGGAGGCTGGGATCGCTATAAACACCACGGTAAATGGCCATAGTGCAGCAATAAAGAACATCGAAACTCAGCTAGGACAATTGGTAAGTGTTGGTAGTACCATGAACAAGGGTAAAGCTCCAGCTGAACAGGAGAAATCTCAGATGGAGTACTACAAGGCTATCACGGTGCATCATGAGGAGGAAACTGAAGTAGTTGAGAAGCAAGAGACTACTGAGTTAGAGGATCTCGCTAAAGAAGCTGAAGAGGGCATGTTGGGCTCCTAG
mRNA sequence
ATGCAGCTGCAGGTGGTACTTTTTGTCCAAGACCGTGGAGAACATACAGGGAGTGCTCAATCGATCGAGTCTGCAGCTGCCTTTGCATCTCAGTTTCAAGAGGCGACTTTCGAACAGGTTCAATATGTTTCTAATTTTAATTATAGGGGATATAGTAATAATTCTACACCTACACATCATCACCCTAGCAATATAAATCATGAGAACTTCTCGTATGCTAATAATAAAAATATTTTAAATCCTCTTGGTTTTGCCCCTCCTAAGCAAGAAAGTAAACAATCGTTAGAGGATCTAGTTGGAGCTTTCATTGCAGAATCTAGCAACAGGACGAACAAGCTTGAGGAGGCTGGGATCGCTATAAACACCACGGTAAATGGCCATAGTGCAGCAATAAAGAACATCGAAACTCAGCTAGGACAATTGGTAAGTGTTGGTAGTACCATGAACAAGGGTAAAGCTCCAGCTGAACAGGAGAAATCTCAGATGGAGTACTACAAGGCTATCACGGTGCATCATGAGGAGGAAACTGAAGTAGTTGAGAAGCAAGAGACTACTGAGTTAGAGGATCTCGCTAAAGAAGCTGAAGAGGGCATGTTGGGCTCCTAG
Coding sequence (CDS)
ATGCAGCTGCAGGTGGTACTTTTTGTCCAAGACCGTGGAGAACATACAGGGAGTGCTCAATCGATCGAGTCTGCAGCTGCCTTTGCATCTCAGTTTCAAGAGGCGACTTTCGAACAGGTTCAATATGTTTCTAATTTTAATTATAGGGGATATAGTAATAATTCTACACCTACACATCATCACCCTAGCAATATAAATCATGAGAACTTCTCGTATGCTAATAATAAAAATATTTTAAATCCTCTTGGTTTTGCCCCTCCTAAGCAAGAAAGTAAACAATCGTTAGAGGATCTAGTTGGAGCTTTCATTGCAGAATCTAGCAACAGGACGAACAAGCTTGAGGAGGCTGGGATCGCTATAAACACCACGGTAAATGGCCATAGTGCAGCAATAAAGAACATCGAAACTCAGCTAGGACAATTGGTAAGTGTTGGTAGTACCATGAACAAGGGTAAAGCTCCAGCTGAACAGGAGAAATCTCAGATGGAGTACTACAAGGCTATCACGGTGCATCATGAGGAGGAAACTGAAGTAGTTGAGAAGCAAGAGACTACTGAGTTAGAGGATCTCGCTAAAGAAGCTGAAGAGGGCATGTTGGGCTCCTAG
Protein sequence
MQLQVVLFVQDRGEHTGSAQSIESAAAFASQFQEATFEQVQYVSNFNYRGYSNNSTPTHHHPSNINHENFSYANNKNILNPLGFAPPKQESKQSLEDLVGAFIAESSNRTNKLEEAGIAINTTVNGHSAAIKNIETQLGQLVSVGSTMNKGKAPAEQEKSQMEYYKAITVHHEEETEVVEKQETTELEDLAKEAEEGMLGS
Homology
BLAST of Lag0006032 vs. NCBI nr
Match:
XP_024032903.1 (uncharacterized protein LOC112095347 [Morus notabilis])
HSP 1 Score: 105.1 bits (261), Expect = 7.0e-19
Identity = 74/182 (40.66%), Postives = 106/182 (58.24%), Query Frame = 0
Query: 14 EHTGSAQSIESAAAFASQFQEATFEQVQYVSNFNYRGYSNNSTPTHHHPSNINHENFSYA 73
E + S +++ A+ +Q E T EQVQ+V+N N+ Y N P H+HP NHENFSYA
Sbjct: 245 EASSSREAVAGASRLFAQ-DEYTQEQVQFVNNRNF-NYRPNQLPNHYHPGLRNHENFSYA 304
Query: 74 NNKNILN-PLGFAPPKQESKQSLEDLVGAFIAESSNRTNKLEEAGIAINTTVNGHSAAIK 133
NN+N+L P GF E K S+EDL+ FI E+ R NK E I T N +A +K
Sbjct: 305 NNRNVLQPPSGFNQQVVEKKPSVEDLLSTFIVETRGRFNKDEARLDNIETHCNNMNATMK 364
Query: 134 NIETQLGQLVSVGSTMNKGKAPAEQEKSQMEYYKAITVHHEEETEVVEKQE-TTELEDLA 193
++E Q+GQL +V + GK P++ E + ++ KAIT+ +E E + QE TE E++
Sbjct: 365 SLEVQIGQLANVVKGQSSGKFPSDTEPNPKDHCKAITLRSGKEVEAPKPQEDKTEEEEVG 424
BLAST of Lag0006032 vs. NCBI nr
Match:
XP_024019991.1 (uncharacterized protein LOC112091203 [Morus notabilis])
HSP 1 Score: 104.4 bits (259), Expect = 1.2e-18
Identity = 75/185 (40.54%), Postives = 104/185 (56.22%), Query Frame = 0
Query: 14 EHTGSAQSIESAAAFASQFQEATFEQVQYVSNFNYRGYSNNSTPTHHHPSNINHENFSYA 73
E + S +++ A+ +Q E T EQVQ+V+N N+ Y N P +HP NHENFSYA
Sbjct: 206 EESFSREAVAGASTLFAQ-DEYTQEQVQFVNNRNF-NYRPNQLPNRYHPGLRNHENFSYA 265
Query: 74 NNKNILNP-LGFAPPKQESKQSLEDLVGAFIAESSNRTNKLEEAGIAINTTVNGHSAAIK 133
NN+N+L P LGF E K +EDL+ FI E+ R NK E I T N +A +K
Sbjct: 266 NNRNVLQPLLGFNQQVVEKKPFVEDLLSTFIVETRGRFNKDEARLDNIETHCNNMNATMK 325
Query: 134 NIETQLGQLVSVGSTMNKGKAPAEQEKSQMEYYKAITVHHEEETEVVEKQETTELEDLAK 193
++E Q+GQL + + GK P++ E + ++ KAIT+ EEE E + Q ED K
Sbjct: 326 SLEVQIGQLANAVKGQSSGKFPSDTEPNPKDHCKAITLRSEEEVEAPKPQ-----EDKIK 383
Query: 194 EAEEG 198
E E G
Sbjct: 386 EEEVG 383
BLAST of Lag0006032 vs. NCBI nr
Match:
XP_024020480.1 (uncharacterized protein LOC112091333 [Morus notabilis])
HSP 1 Score: 101.7 bits (252), Expect = 7.7e-18
Identity = 73/185 (39.46%), Postives = 104/185 (56.22%), Query Frame = 0
Query: 14 EHTGSAQSIESAAAFASQFQEATFEQVQYVSNFNYRGYSNNSTPTHHHPSNINHENFSYA 73
E + S +++ A+ +Q E T EQVQ+V+N N+ Y N P H+HP NHENFSYA
Sbjct: 262 EASSSREAVAGASTLFAQ-DEYTQEQVQFVNNRNF-NYKPNQLPNHYHPGLRNHENFSYA 321
Query: 74 NNKNILN-PLGFAPPKQESKQSLEDLVGAFIAESSNRTNKLEEAGIAINTTVNGHSAAIK 133
NN+N+L P GF E K S+EDL+ FI E+ R NK E I T N +A +K
Sbjct: 322 NNRNVLQPPPGFNQQVVEKKPSVEDLLSTFIVETRGRFNKDEARLDNIETHYNNMNATMK 381
Query: 134 NIETQLGQLVSVGSTMNKGKAPAEQEKSQMEYYKAITVHHEEETEVVEKQETTELEDLAK 193
++E Q+GQL + + GK P++ E + ++ KAIT+ +E E + Q ED +
Sbjct: 382 SLEVQIGQLANTVKGQSSGKFPSDTEPNPNDHCKAITLRSGKEVEAPKPQ-----EDKIE 439
Query: 194 EAEEG 198
E E G
Sbjct: 442 EEEVG 439
BLAST of Lag0006032 vs. NCBI nr
Match:
WP_217833153.1 (retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002])
HSP 1 Score: 100.1 bits (248), Expect = 2.2e-17
Identity = 70/182 (38.46%), Postives = 101/182 (55.49%), Query Frame = 0
Query: 13 GEHTGSAQSIESAAAFASQF-QEATFEQVQYVSNFNYRGYSNNSTPTHHHPSNINHENFS 72
G+ + SI S AA AS+ E YV +YR Y + PTH+HP+ NHENFS
Sbjct: 304 GQAQTNPPSIASLAALASEMGVHGDNETANYVDRGHYRNYQHQQLPTHYHPNLRNHENFS 363
Query: 73 YANNKNILN-PLGFAPPKQESKQSLEDLVGAFIAESSNRTNKLEEAGIAINTTVNGHSAA 132
YANNKN+L P GF SLED++ F+ ES +RT LE + AI +TV A
Sbjct: 364 YANNKNVLQAPQGFNGAGNAKTSSLEDIMLDFVKESRSRTTTLENSVQAIASTVQSQGKA 423
Query: 133 IKNIETQLGQLVSVGSTMNKGKAPAEQEKSQMEYYKAITVHHEEETE---VVEKQETTEL 190
++N+E QL Q+ + TM KGK P+ E + E KA+T+ ++ ++++ E E+
Sbjct: 424 LQNLEVQLSQMKTSLQTMQKGKFPSCPEINPREECKAVTLRSGKKLSTPLIIDEDEEQEV 483
BLAST of Lag0006032 vs. NCBI nr
Match:
XP_024017305.1 (uncharacterized protein LOC112090376 [Morus notabilis])
HSP 1 Score: 95.9 bits (237), Expect = 4.2e-16
Identity = 62/150 (41.33%), Postives = 87/150 (58.00%), Query Frame = 0
Query: 14 EHTGSAQSIESAAAFASQFQEATFEQVQYVSNFNYRGYSNNSTPTHHHPSNINHENFSYA 73
E + S +++ A+ + E T EQVQ+V+N N+ Y N P H+HP NHENFSYA
Sbjct: 156 EASSSREAVAGASTLFAH-DEYTQEQVQFVNNRNF-NYRPNQLPNHYHPGLRNHENFSYA 215
Query: 74 NNKNILN-PLGFAPPKQESKQSLEDLVGAFIAESSNRTNKLEEAGIAINTTVNGHSAAIK 133
NN+NIL P GF + E K S+EDL+ FI E+ R NK E I T N +A +K
Sbjct: 216 NNRNILQPPPGFNQQEVEKKPSMEDLLSTFIVETRGRFNKDETRLDNIETHCNNMNATMK 275
Query: 134 NIETQLGQLVSVGSTMNKGKAPAEQEKSQM 163
++E Q+GQL + + GK P++ E + M
Sbjct: 276 SLEVQIGQLANAVKGQSSGKFPSDTEPNPM 303
BLAST of Lag0006032 vs. ExPASy TrEMBL
Match:
A0A2P5BPI6 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_313500 PE=4 SV=1)
HSP 1 Score: 90.5 bits (223), Expect = 8.6e-15
Identity = 60/144 (41.67%), Postives = 84/144 (58.33%), Query Frame = 0
Query: 51 YSNNSTPTHHHPSNINHENFSYANNKNILN-PLGFAPPKQESKQSLEDLVGAFIAESSNR 110
YSN PTH++P NHENFSY N +N+L P GF PP E K SLEDL+ FI E+ +
Sbjct: 2 YSN--LPTHYYPGLRNHENFSYGNTRNVLQPPPGFNPPVSEKKSSLEDLLSTFIVETRRK 61
Query: 111 TNKLEEAGIAINTTVNGHSAAIKNIETQLGQLVSVGSTMNKGKAPAEQEKSQMEYYKAIT 170
NK E I T N +A +K++E Q+GQL + GK P++ E + ++ KAIT
Sbjct: 62 FNKDEARLDNIETHCNNMNATMKSLEVQIGQLANSIKGQQSGKFPSDTETNPKDHCKAIT 121
Query: 171 VHHEEETEVVEKQETTELEDLAKE 194
+ + +E EV +E + D+ KE
Sbjct: 122 LRNGKEVEVSRLKE--NVGDMTKE 141
BLAST of Lag0006032 vs. ExPASy TrEMBL
Match:
A0A2P5B1T0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_279370 PE=4 SV=1)
HSP 1 Score: 89.4 bits (220), Expect = 1.9e-14
Identity = 60/143 (41.96%), Postives = 80/143 (55.94%), Query Frame = 0
Query: 39 QVQYVS--NFNYRGYSN-NSTPTHHHPSNINHENFSYANNKNILN-PLGFAPPKQESKQS 98
QV Y++ NFNYRG + N+ PTH+HP NHENFSY NN+N+L P G E K S
Sbjct: 72 QVNYLNNWNFNYRGNNMLNNLPTHYHPGLCNHENFSYTNNRNVLQPPSGLNQSVAEKKPS 131
Query: 99 LEDLVGAFIAESSNRTNKLEEAGIAINTTVNGHSAAIKNIETQLGQLVSVGSTMNKGKAP 158
LED++ FI E+ R K E I N +A IK++E Q+GQL + GK P
Sbjct: 132 LEDILSTFIMETRGRFKKYEACLDNIENHCNNMNATIKSLEVQIGQLANSIKGQISGKFP 191
Query: 159 AEQEKSQMEYYKAITVHHEEETE 178
+ E + + KAIT+ +E E
Sbjct: 192 NDTETNPKYHCKAITLRSGKEVE 214
BLAST of Lag0006032 vs. ExPASy TrEMBL
Match:
A0A6P9F5T6 (uncharacterized protein LOC108989976 OS=Juglans regia OX=51240 GN=LOC108989976 PE=4 SV=1)
HSP 1 Score: 88.2 bits (217), Expect = 4.3e-14
Identity = 64/175 (36.57%), Postives = 93/175 (53.14%), Query Frame = 0
Query: 24 SAAAFASQFQEATFEQVQYVSNFNYRGYSNNSTPTHHHPSNINHENFSYANNKNILNPL- 83
+A + E + EQVQY++N+NY Y N P +++P NHEN SY N KN+L P
Sbjct: 53 AATSMTIPSNEESQEQVQYINNWNY-NYCGNPMPNYYYPGLQNHENLSYRNTKNVLQPQP 112
Query: 84 --GFAPPKQESKQSLEDLVGAFIAESSNRTNKLEEAGIAINTTVNGHSAAIKNIETQLGQ 143
GF E K SLED + +F+ E++ R K + I T + A IKN+E Q+GQ
Sbjct: 113 PPGFDSQSSEKKISLEDAMVSFVQETNVRFKKTDSRLDNIETHCSNMGATIKNLEVQIGQ 172
Query: 144 LVSVGSTMNKGKAPAEQEKSQMEYYKAITVHHEEETEVVEKQETT---ELEDLAK 193
L ++ +G P+ E + E YKAIT+ E E +ET +L+ +AK
Sbjct: 173 LAKTINSQQRGTFPSNIEMNPNEQYKAITLRSGREIERSPSKETNSTLQLKIMAK 226
BLAST of Lag0006032 vs. ExPASy TrEMBL
Match:
A0A6P9DWY0 (uncharacterized protein LOC118344026 OS=Juglans regia OX=51240 GN=LOC118344026 PE=4 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 9.5e-14
Identity = 66/168 (39.29%), Postives = 88/168 (52.38%), Query Frame = 0
Query: 20 QSIESAAAFASQF--QEATFEQVQYVSNFNYRGYSNNSTPTHHHPSNINHENFSYANNKN 79
QS E AA + EA+ EQVQY++N NY Y N P ++H NHEN SY N KN
Sbjct: 108 QSAEYVAATSMTVPSNEASQEQVQYINNRNY-NYRGNPMPNYYHLGLRNHENLSYKNTKN 167
Query: 80 ILNP-LGFAPPKQESKQSLEDLVGAFIAESSNRTNKLEEAGIAINTTVNGHSAAIKNIET 139
+L P GF E K SLED + +F+ E++ R K + I T + AAIKNIE
Sbjct: 168 VLQPHPGFDSQPSEKKISLEDAMVSFVEETNTRFKKTDSRLDNIETHCSNMGAAIKNIEV 227
Query: 140 QLGQLVSVGSTMNKGKAPAEQEKSQMEYYKAITVHHEEETEVVEKQET 185
Q+GQL + + +G P+ E + E KAIT+ E + ET
Sbjct: 228 QIGQLATTINAQQRGTFPSNTEVNPREQCKAITLRSGRELDRSPSNET 274
BLAST of Lag0006032 vs. ExPASy TrEMBL
Match:
A0A2P5A3N0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_372170 PE=4 SV=1)
HSP 1 Score: 84.3 bits (207), Expect = 6.2e-13
Identity = 57/145 (39.31%), Postives = 84/145 (57.93%), Query Frame = 0
Query: 53 NNSTPTHHHPSNINHENFSYANNKNILN-PLGFAPPKQESKQSLEDLVGAFIAESSNRTN 112
+ + PTH+H NHENFSYANNKN+L P G P +E K SLED++ FI E+ R N
Sbjct: 2 SKNLPTHYHLGFRNHENFSYANNKNVLQPPPGLNQPVEEKKPSLEDILSTFIMETRGRFN 61
Query: 113 KLEEAGIAINTTVNGHSAAIKNIETQLGQLVSVGSTMNKGKAPAEQEKSQMEYYKAITVH 172
K E I T N +A +K++E Q+G+L + K P++ E + ++ KAIT+
Sbjct: 62 KDEALLDNIETHCNNMNATMKSLEVQIGELANSIKGQISRKFPSDTETNPKDHCKAITLR 121
Query: 173 HEEETEVVEKQETTELEDLAKEAEE 197
E+E EV+ KQ T+ ++ + E
Sbjct: 122 SEKEVEVL-KQMTSMFDETKDDVGE 145
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_024032903.1 | 7.0e-19 | 40.66 | uncharacterized protein LOC112095347 [Morus notabilis] | [more] |
XP_024019991.1 | 1.2e-18 | 40.54 | uncharacterized protein LOC112091203 [Morus notabilis] | [more] |
XP_024020480.1 | 7.7e-18 | 39.46 | uncharacterized protein LOC112091333 [Morus notabilis] | [more] |
WP_217833153.1 | 2.2e-17 | 38.46 | retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 70... | [more] |
XP_024017305.1 | 4.2e-16 | 41.33 | uncharacterized protein LOC112090376 [Morus notabilis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2P5BPI6 | 8.6e-15 | 41.67 | Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_313500 PE=4 SV... | [more] |
A0A2P5B1T0 | 1.9e-14 | 41.96 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_279370 PE... | [more] |
A0A6P9F5T6 | 4.3e-14 | 36.57 | uncharacterized protein LOC108989976 OS=Juglans regia OX=51240 GN=LOC108989976 P... | [more] |
A0A6P9DWY0 | 9.5e-14 | 39.29 | uncharacterized protein LOC118344026 OS=Juglans regia OX=51240 GN=LOC118344026 P... | [more] |
A0A2P5A3N0 | 6.2e-13 | 39.31 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_372170 PE... | [more] |
Match Name | E-value | Identity | Description | |