Lag0006006 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGGTGCAGATAAACACCTGAAACACATCTGGACGAGGCAGGAGGAGGCAAGGTTGGTGGAATCCCTCGTGGAGCTCGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAAGCCCGGTACCTAGCTCGACTGAAGCGGATGATAAAAGAGAAAATGTCGACCTGCACCATTAGATTCAACGTCCATAATAGACTGTAAGGTGCAGTCCTTGAAACGGCAATACAGTGCCATCTTAGAGATGTTGGGTCTGGACTGCAGTGGATTCGGTTGGAATGATGAGTTTAAATGCGTCCAGGTTGAGAAGGAGGTCTATGATGCATGGGTGAAGATACGGTCATTAGTCATTCATTGA ATGGCAGGTGCAGATAAACACCTGAAACACATCTGGACGAGGCAGGAGGAGGCAAGGTTGGTGGAATCCCTCGTGGAGCTCGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAAGCCCGACTGTAAGGTGCAGTCCTTGAAACGGCAATACAGTGCCATCTTAGAGATGTTGGGTCTGGACTGCAGTGGATTCGGTTGGAATGATGAGTTTAAATGCGTCCAGGTTGAGAAGGAGGTCTATGATGCATGGGTGAAGATACGGTCATTAGTCATTCATTGA ATGGCAGGTGCAGATAAACACCTGAAACACATCTGGACGAGGCAGGAGGAGGCAAGGTTGGTGGAATCCCTCGTGGAGCTCGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAAGCCCGACTGTAAGGTGCAGTCCTTGAAACGGCAATACAGTGCCATCTTAGAGATGTTGGGTCTGGACTGCAGTGGATTCGGTTGGAATGATGAGTTTAAATGCGTCCAGGTTGAGAAGGAGGTCTATGATGCATGGGTGAAGATACGGTCATTAGTCATTCATTGA MAGADKHLKHIWTRQEEARLVESLVELVHEGGWRGDNGTFKPDCKVQSLKRQYSAILEMLGLDCSGFGWNDEFKCVQVEKEVYDAWVKIRSLVIH Homology
BLAST of Lag0006006 vs. NCBI nr
Match: XP_038889264.1 (uncharacterized protein At2g29880-like [Benincasa hispida]) HSP 1 Score: 119.4 bits (298), Expect = 1.7e-23 Identity = 60/111 (54.05%), Postives = 71/111 (63.96%), Query Frame = 0
BLAST of Lag0006006 vs. NCBI nr
Match: XP_038896734.1 (uncharacterized protein At2g29880-like [Benincasa hispida]) HSP 1 Score: 118.6 bits (296), Expect = 2.9e-23 Identity = 58/109 (53.21%), Postives = 72/109 (66.06%), Query Frame = 0
BLAST of Lag0006006 vs. NCBI nr
Match: KAA0035413.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK25738.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 118.6 bits (296), Expect = 2.9e-23 Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of Lag0006006 vs. NCBI nr
Match: KAA0036099.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 117.5 bits (293), Expect = 6.4e-23 Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 0
BLAST of Lag0006006 vs. NCBI nr
Match: KAA0057175.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK18787.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 116.3 bits (290), Expect = 1.4e-22 Identity = 51/93 (54.84%), Postives = 65/93 (69.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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