Lag0005930 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0005930
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	PMD domain-containing protein
Location	chr6: 33862550 .. 33870091 (+)
RNA-Seq Expression	Lag0005930
Synteny	Lag0005930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTATTTTTGCGAGCATCCCGATCCAAAGAAAAACTGCTTAGTCATCTTGAAGGATAGATATCAACCTGTTGAAAATGGAGTCATTCTTCATGTAGGAGAGGTGGTGCATGAGAACTTTGGGACATCGCAGTCTTCCTTAGATAGTTCTAGTGTCCTATCTAGATGGTCTAAAGGGAGGCTCATGAATCAAGAATCATCCCTGAAAGTGTGGTTCTTAGAATCTCCAATACATAACAAATTGGAAAGTCAGAACCTAGAATCGACACTAGGTCGTCAAATTATTGAGGGCAAAGCTCGATGGAGTTCGTCATTTAAACTCCATGGAGAATTCAATTACATCTGCCATTATTGGGAATGATTGGAAATTGTAGTTGCTCGCAATGAGATGATACTTAAGAAGGCTCGTCTGTTTGATGGTGTGATGGGTTCCTTATACACCTATGACCGTAATACTGATATTATTCAAGCCTTTTGTGAGGTAGGTGTCCTTCAACAAATACTTTTCATACGTCGTCTGGCAAATTGTCTATCTCCATATGGGACATGTGGAGATTAGGGGGTCTTTCCATTAAAGGGAAGTTTTATGATGAAGTTATTCCTTACTGCAAGGAATTATTAGCGTCATCTGATCAAAACTATGAAGGGCACAAAATGTTGTGAGTATCTTTTGATGTTTATTATCATATCGCCTCTCAGAGGCGTGATCATTCCCAGATTTCCATTAGTTCATGGATTTCTTTTTGGTTTAAGAGAGATTTGAAGTATGAGAAGCCTCCCACTCAAAAAGCAAAGAAAGCTAGTCATCCTCGCTCAACTCATAATCTAGATGGAGTTTCTATTAGGTGTCTTGACTAGTCTAAGAAAGAACTCGAGTTCTTTCGTGAGCTGGGTGTAGAAGATGAATTGAGAGAAAAGACATACTTGGTTGCTTTTCTTTCTTATTGGTTATATGTATTTGTATTTCCCAACAAGCAGATTTCTCTTTGTCCAGAGGTCTTCAAAGTTGCAAGTCTTATGGTTGAAGGTTATGCTTTTAGTCTTGTTATTCCAGTTTTGGCTAATATCTATCATAGATTGGGCCATATTTATAAAGCGTCTCCTCCGACAGGTTGCTCAAAGGCTTGTTTTCTCGTGCATTATGTTTATGTTTGGCTTGCTTATTACATTAACACGCATTATGTCGTTCTAGAAAAAGGTAGGGGCCCGTTGATGGTCTAGTTTTTCGAAGAGGGTGGAGCTAAATACTTTGACGATTTTGAGGCTCGTGTACATATTTATAAAGGTCAATATGTATCATGGTATGTTAATCTCCATCCCAAAAATAAATGCATGGTTTTGAAAGATGATGACAAGCTATCATTTTGGCATTCCTCGTTCTTTACAAGAATTCAATCATGTTTTTTATCTTCACGATGTGGATCTTCGATGGTCATTGAAGCTTATAGTCCTTGTCGATTTAGTCGACAATTTGGGTTTTACCAAGACATGTCAAATAATCTGAGCGAAGAAATTTCTAAAGCTAACTTAGATAATGTATTGCGTCTTTGGATGGTATGTGTTCAAGAAAAAACATTGTCTCAAGTTTATCTCTCTGCACATGTGATGAATCCACACATCCAAATTACCCAACGTTATCGGAGGTAAAGTTGGTGGCCAAAAATGGAAATTATCTTGAAGAAGGCATAGAAAAGTTAGTGGCTAGTGTTATTCCTCCTCCTCCCAAGCCGAAATTTCCTAAAAAGGTCGGTGATGGTAACAAACGTAAAAGGATTCACGTGTTTGAACCTGGTAAGTTTCTTTCTAGGGATAATGATGGTAGTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGAAACAAATTAATCGATCTCAATAAAGCGTTATTTGAATGATTCAGTAATTTGGTTTTTGAATAATCGAATTTGCATTAATAAACCCTAAATTCAATAAACTAAGATCCAAGGTTGTTTAAATGAAACTTTGACTAGTATGTGCGGACATACGGGGATCGGTGTCCAAGTAACAACCTAAAAGGTCTATAGTATAGGGATAAAGTTGGGTACCTTATCCTGGTGACACTATGTGATACCACCCACCTTGTATTCGATACAAATGCAATGATCCAAAGCATCCATGTAGGAGACATGCGGGTGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGAACCGCGAAATAGTAACCACTAGATGTAACGTCGTTAACTAGTTTAGGTTTCTATTTCAATATGATGACCTAGGTAACTCAATCTCAATCCTGAGTCTGTTATGAACTCCTTTCAGGAGGGATTGTTCTTAGATTTGTATGGGTGAGAGTGGCCAATTCGCCGACTCAATAATCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAAATGGAATTCATTCATTCCCCTATTGGGGTAAGTAGATGTGTGTTCCCTAAAAGGCTGATTCTGGGGCTTGAACAAAGGCGCGTCGTCCTCTCCTGGCCTGAAAGGAACTCCTGTTTAGTGGTTGGACCCTAAACAACTTGTTCATTAGAGGGATCAGGGGTACTTAAGGAACCAGAGGTAACCTAGGGGTAAAACGGTAATTTGACCCAGCTGGTGTTACGAACACACATGAAGGATTGACTTACTGCATTGGTTGATATCCATGGACATAGAAATATTCTACAGTGCGAAGAGTGTAGTTGTGGGTCTTTAGTGGAGTGACCCACAGTTAACGAATGTTGACTAACTTGGTTAATGAGTTTAGCCAATTAGTCTCATATCGTTGAAGCTTCTAATCTGTAGGTCCATTAGGTTCCACTGGTAGCTCGTAAAGAGACTTGAGGCAATTAAGTATAAATTGTAAATTGAAAGTGTTCAATTTATTTAGGGGAATCATATAATGTATATTGATACATTATAATATAAAGTTTATGAAACTTTATAATTTTGAACTAATTTCAAAATTAATTCTTGAGAGAAAATATTTGAAAGAGTTCAAATAATTAATATGAATTGGATTCATATTAATATAAATAATTTAATAAAATCCATAAGATTAAATATGTGATATTTAATTGGGTAATTAATTAATTATGGAATTAATTATTTATTTATTAAAATTAGATATGAATAAGATAATAGATTTGATCTTATTCATGACATTTTCCTATTAGGAAAAGGTCTTGGTCTTTTCCTATAAATAGGACCCCTGGGGTGGGGTGAAAGACATCACATTCATTCTCCTACTCTCAGAGAATTTTCGTGAAGGCTTCTGATAGGAAATTTAATCGCTTCTAATTTATATTGAATTAACTAAAGAATATATCGTTGTTGTGCATTAATCCAAGTATAAAGTATGCACTACCAAGTAATACCTGGAGTATTCCAGGGTCGAATCCACAGGGAAGGGGCGATTAGAGAAAATATCTCAAATTAAATCTTATTCTAATGACATTGTGCTAAGAATAAAATATGGATGTGACAGGTCGAACATGAGATAAAGAAAAGTAATAATAATGCAATAGAAAGATACGGTGGATGATGAGCTATCAAGACTTTCGTCGCAGCAACCACGTGCGACAGATAAGATATTAATGTAGCGCATAACAATGAATCGACAGAATATTGATGCCTAAGCGAGAAATAAACATGTGATTCCCTTCCGGTATTACACATGCGATGAACTAAGAATATTCCTATTGCTTAATTCATGCGTTTAATTAGTTCTCTATATGCTTGCAAGCGGTTGAATTATCCCTAAAGCAACCCAAACACATTCATGAAATATCCTAAGCGGCTGAGTTATTCTTAAAGCAACCAGACTACATGTAATGTATAATCTTGATCTACTTAGATATTTCCACATGCATTACCCTTCCGGGATTTATCATGCTACTACCTCTATCTGTTGATCAGACGGATATTAGTAATGATAGAATTATCACATCTAAGTAGAAAACATCAATATCACTGATTCATTGCATTGCATACAAAAAATAATCTTAATGCCTCATGGGCGCCTAGGCTAAGCCTTGATAAAAAGAAATTAGTTCATGCTACAACATACAATAAAACAAAAAAAAAACTCTAAGAGAGACTTGGATCCTTGGATCCCTGGATTGCTTTTGATTCTTCATCTCCCACCTAATTATAAACCTTTCTTGCTTGGAGCCAAAACATGTATTGCTTTGAGTCAAAGCATGTGTTGCTTGGAGCCAAAGCATGTATTGCATGGAGCCAAAGCATGTGTTGCTTGGATAGAAACTTGTTGTAGCATCATCATGCATCCCATGCGCCAGACTGCTACAACAACAAGCTTTCCATGCTTTAGACTGCTACATCATCAAGCTTTCATTGCTACAGCAACAAGCATCCCTTGCTACAGTAACAAGCTTTCCATGCCCCAGCTGCTACAACATCAAGCTTCCATTGCAACAGCAACAAGCATCCCTTGCTACAACAACATGCTTTCCATTGCTACAGCAACAAGCATCCCTTGCTACAGCAACAAACTTTCCATGCTCTAGCTGCTACAATATGTCATGCCCCAACCGCATCATGCTCTAGCGCATAATTGGCCAAGTTTTTCCTGATGCAACAATAAATTAGAATTAGTGCACTTTTGTATGAATTTTAAAGATAATAATCAATATGAGCACATTAATTAAAAAAAAAATCAATATTACTGCATCTAGCATATAAATTAGTTAAATTTTGGGTATTTTCACTCTCTTAAGGCTCACAATAAGCTTAAATTAGACGCTTAATAACTTGATATTTTCAAGTTATCAATTCCCTCTAGACTTCCACCAGTCTTCTGCCTCTAGAAGTCTCAGAGTCATACCAGTGTAGCCATAGTGGTGGTGTTCGCAGTAGTTTGTGATTATTTCACAAGTAGTTGGTGATTTTAATCTGAGTCGTCAACGAGTGTAAGTAATTTGTTACTATATAAATTAGATTTAGTCTAATATTTTTGTATGTTTAGCCTTAATATAAATTTAGAATAGTTCTAAGATTATTGTCAATGTATTGGTATTTTAGATTAAACAAAATTAACTACGAATCGGTCTCAATCACACTTCCGCTTTACGGAATTACGGAATTACGGAATTCCAATCCTTCAGGTAGTCAGAGCAGTAGTAGCGATCATCATTGGAAAAGTCCAATAAACCATCGGTATGTGAAGATGAATTTTTTATGGGGTTCCTAGCGCATCACAATTTTCTGCACTCCCCACCACCATTGGTAAGTGTTTCTACCCTTTCTTTTTATTTCACTGTAATATTTCTTTATCATTATTCATTTTTTTCTTTATTTTGCAGTCGCCTTTACATGATCTCATTATAGAAGCTAGAGTAGTCCACCTTCTTTTATGAGTCAAAATGTTTTTTATTATGTGGCTATGCGTGTGGGCAACTTCAAGGCGTCGATGGATAGAGTTGTGTGATGGACGACTTGTCGAAGGTTGTATCAAATAAATTTATAATCCACAACAACTAGAGCTAACTTGTAGCAATAGTGGTCGGGGTTGATCACAATGAGCAACGTAATTAATTAATTTAATTAGATTTCTCGATTAGTAACCAAGTGCAGTTTTGGATGATGAATTAACTAAAAACATAAAATTGCAATTGCAATGAATTAAAATAACAGAAAAGTAAAGATAAGTTGACTAATCTCACATCGGAATCGCACAATTGGTTATTCTAACTTCAGTTTGGAAACTCAATCATTGACTCTCAAATTAATAGAATTATTATTAATCACTAACTATCATTGGAACCAATGATTTAGACCTCTAACCTTTCCAACTTTATCAATACATCAAAGTTAGAGCCTAATTAGGATTCTAACTAACGATGTCTCATTAGTAGAATCTAATCGCATTATGTGAGTTGGATCGTTAAGTGGATTTATCTAAACTAGGAACAACTTGGGTTTATACAATTCTAGGCTTAAATTCCTAAATCTATCATGCAATTATATCAATTGGGATAACACTTCATTCAACACATTCAAACAAAAAATCTATAACTAACCAATATAGCAAACAATCAAATCAAGTCAACAAATAGGTTGTCAAGCTATTCTATTAATTTGATTGTGATTAAGAACGGGAATTTGAAGCATAATCAACAATAATCTATTGAAATTACAAGAAAAGATCTCAAGAGTATGCCAAACTTACATTAGATGTCCCCAATTGCGACGATCTAAACTTAGTCGATCATCGAGACACTCCAACTAAGCTCCTTGGTTTGATTAGACATCCCAAATTACAAGAAAACTACCCTAAATTACAGTAGTAATAAAAAGGGTATAGAGAAAGAGGGGAAGAAATCAGCTAAGAGGGGGAAAAACTAAGAGAGATTGACCTAATCACGAAAAAATCCCCTTTTATATCTAGTTGCAACGTCGAGATGTTGCCCCTTTATATATGGAAAATCTGAAATTCACGTGAAAAACACCATCTGGAAAATCTGCCTAGCGTCGAGATGCTAGGTCTTGGATTTTCAGCATTGAGACTAGCGTTGCACAGTGTTCTGACACTCTTCTCTCAAGTTTTTGGCTTGAATTTGAAGTCTACAGTGCGTTGAGATGCTACCCACAGGGTCTAGACACTTGGCCTCGGGAAAATAGCCCAAATTGCTCCGATTTTGCTCGTTTTAGCTCCAAAATGGCTCAAAACCTTCGTAAGGGACCTATGCACTTATTATCCTCATTTAAAAAAAAATCGCAAGGAATTCAACGAAGATAAGCAAAATATGAGAAGATTACTCTACAAGCATTTAATGCTATCATTGTGACTCAATCTTGTCGTCCTGTAACCAACGAGATTCCTGGACAAACAAAGACAACAACACATGCAGCTGTGTCTGAGGTCTCTAATTATTGTGCTGATGATGTGATTTCCAACTATAGGCGACAAGCTGTCTTTGCCATGTGGGAGAGCGTACAACAGAAAATCATACACACTTCCTTTGACAAGATACCTCATCTTAAACAATAGATGTTCAAAATATTCCACGCGATTATTGAGACCTATGCATCCAGCTTGACCCCTCTTAAAGAAATTGTAAGTGCATATTTCAAGAAGGTAGAGAAGTATAACCAGCTACAATCGTCGTTTTCTTCTCAATTGATTATGGTGAATAAGAACCGTCAATTGGAAGAGACCAAATTTAGTTTGGAGAAGATACTATATAGTGAAAGTGAAATACTCATAGCAAAGGGTACCCTTCAACAACAACATTTTTGCAAATATTGTGAGAAGAAGAAGAATTAGAAGCTAGACTTGAAGCTGTGAAAGCTAAGCGAGATGAGATTTCTAAGTTGATTGTCAAGAAGGAGGACCTTTTAAATCAACATCAACTCAAGGCTTCTAAACTGCAAGGAACTATAAGTAGTATTGAAGATGTCTCTGTTCTTACTGATGTTGATGCTAATACTTTGGCGATGCTTCGTGGAATGTTGGAAGATGCACAACAAGAGCTGAAGAACTACAAGTGGATGTCGTGA

mRNA sequence

ATGGTGTATTTTTGCGAGCATCCCGATCCAAAGAAAAACTGCTTAGTCATCTTGAAGGATAGATATCAACCTGTTGAAAATGGAGTCATTCTTCATGTAGGAGAGGTGGTGCATGAGAACTTTGGGACATCGCAGTCTTCCTTAGATAGTTCTAGTGTCCTATCTAGATGGTCTAAAGGGAGGCTCATGAATCAAGAATCATCCCTGAAAGTGTGGTTCTTAGAATCTCCAATACATAACAAATTGGAAATTGCTCGCAATGAGATGATACTTAAGAAGGCTCGTCTGTTTGATGGTGTGATGGGTTCCTTATACACCTATGACCGTAATACTGATATTATTCAAGCCTTTTGTGAGATTTCTCTTTGTCCAGAGGTCTTCAAAGTTGCAAGTCTTATGGTTGAAGGTTATGCTTTTAGTCTTGTTATTCCAGTTTTGGCTAATATCTATCATAGATTGGGCCATATTTATAAAGCGTCTCCTCCGACAGGTTGCTCAAAGGCTTGTTTTCTCGTGCATTATGTTTATGTTTGGCTTGCTTATTACATTAACACGCATTATGTCGTTCTAGAAAAAGAAGGCATAGAAAAGTTAGTGGCTAGTGTTATTCCTCCTCCTCCCAAGCCGAAATTTCCTAAAAAGGTCGGTGATGGTAACAAACGTAAAAGGATTCACGTGTTTGAACCTGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAAATGGAATTCATTCATTCCCCTATTGGGACTGCTACAACAACAAGCTTTCCATGCTTTAGACTGCTACATCATCAAGCTTTCATTGCTACAGCAACAAGCATCCCTTGCTACAGTAACAAGCTTTCCATGCCCCAGCTGCTACAACATCAAGCTTCCATTGCAACAGCAACAAGCATCCCTTGCTACAACAACATGCTTTCCATTGCTACAGCAACAAGCATCCCTTGCTACAGCAACAAACTTTCCATGCTCTAGCTGCTACAATATATTAAACAAAATTAACTACGAATCGGTCTCAATCACACTTCCGCTTTACGGAATTACGGAATTACGGAATTCCAATCCTTCAGGTAGTCAGAGCAGTAGTAGCGATCATCATTGGAAAAGTCCAATAAACCATCGCATTGAGACTAGCGTTGCACAGTGTTCTGACACTCTTCTCTCAAGTTTTTGGCTTGAATTTGAAGTCTACAGTGCGTTGAGATGCTACCCACAGGGTCTAGACACTTGGCCTCGGGAAAATAGCCCAAATTGCTCCGATTTTGCTCGTTTTAGCTCCAAAATGGCTCAAAACCTTCAAGAAGAATTAGAAGCTAGACTTGAAGCTGTGAAAGCTAAGCGAGATGAGATTTCTAAGTTGATTGTCAAGAAGGAGGACCTTTTAAATCAACATCAACTCAAGGCTTCTAAACTGCAAGGAACTATAAGTAGTATTGAAGATGTCTCTGTTCTTACTGATGTTGATGCTAATACTTTGGCGATGCTTCGTGGAATGTTGGAAGATGCACAACAAGAGCTGAAGAACTACAAGTGGATGTCGTGA

Coding sequence (CDS)

ATGGTGTATTTTTGCGAGCATCCCGATCCAAAGAAAAACTGCTTAGTCATCTTGAAGGATAGATATCAACCTGTTGAAAATGGAGTCATTCTTCATGTAGGAGAGGTGGTGCATGAGAACTTTGGGACATCGCAGTCTTCCTTAGATAGTTCTAGTGTCCTATCTAGATGGTCTAAAGGGAGGCTCATGAATCAAGAATCATCCCTGAAAGTGTGGTTCTTAGAATCTCCAATACATAACAAATTGGAAATTGCTCGCAATGAGATGATACTTAAGAAGGCTCGTCTGTTTGATGGTGTGATGGGTTCCTTATACACCTATGACCGTAATACTGATATTATTCAAGCCTTTTGTGAGATTTCTCTTTGTCCAGAGGTCTTCAAAGTTGCAAGTCTTATGGTTGAAGGTTATGCTTTTAGTCTTGTTATTCCAGTTTTGGCTAATATCTATCATAGATTGGGCCATATTTATAAAGCGTCTCCTCCGACAGGTTGCTCAAAGGCTTGTTTTCTCGTGCATTATGTTTATGTTTGGCTTGCTTATTACATTAACACGCATTATGTCGTTCTAGAAAAAGAAGGCATAGAAAAGTTAGTGGCTAGTGTTATTCCTCCTCCTCCCAAGCCGAAATTTCCTAAAAAGGTCGGTGATGGTAACAAACGTAAAAGGATTCACGTGTTTGAACCTGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAAATGGAATTCATTCATTCCCCTATTGGGACTGCTACAACAACAAGCTTTCCATGCTTTAGACTGCTACATCATCAAGCTTTCATTGCTACAGCAACAAGCATCCCTTGCTACAGTAACAAGCTTTCCATGCCCCAGCTGCTACAACATCAAGCTTCCATTGCAACAGCAACAAGCATCCCTTGCTACAACAACATGCTTTCCATTGCTACAGCAACAAGCATCCCTTGCTACAGCAACAAACTTTCCATGCTCTAGCTGCTACAATATATTAAACAAAATTAACTACGAATCGGTCTCAATCACACTTCCGCTTTACGGAATTACGGAATTACGGAATTCCAATCCTTCAGGTAGTCAGAGCAGTAGTAGCGATCATCATTGGAAAAGTCCAATAAACCATCGCATTGAGACTAGCGTTGCACAGTGTTCTGACACTCTTCTCTCAAGTTTTTGGCTTGAATTTGAAGTCTACAGTGCGTTGAGATGCTACCCACAGGGTCTAGACACTTGGCCTCGGGAAAATAGCCCAAATTGCTCCGATTTTGCTCGTTTTAGCTCCAAAATGGCTCAAAACCTTCAAGAAGAATTAGAAGCTAGACTTGAAGCTGTGAAAGCTAAGCGAGATGAGATTTCTAAGTTGATTGTCAAGAAGGAGGACCTTTTAAATCAACATCAACTCAAGGCTTCTAAACTGCAAGGAACTATAAGTAGTATTGAAGATGTCTCTGTTCTTACTGATGTTGATGCTAATACTTTGGCGATGCTTCGTGGAATGTTGGAAGATGCACAACAAGAGCTGAAGAACTACAAGTGGATGTCGTGA

Protein sequence

MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRLMNQESSLKVWFLESPIHNKLEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAFCEISLCPEVFKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHYVVLEKEGIEKLVASVIPPPPKPKFPKKVGDGNKRKRIHVFEPGARPNGGWEHNSTKWNSFIPLLGLLQQQAFHALDCYIIKLSLLQQQASLATVTSFPCPSCYNIKLPLQQQQASLATTTCFPLLQQQASLATATNFPCSSCYNILNKINYESVSITLPLYGITELRNSNPSGSQSSSSDHHWKSPINHRIETSVAQCSDTLLSSFWLEFEVYSALRCYPQGLDTWPRENSPNCSDFARFSSKMAQNLQEELEARLEAVKAKRDEISKLIVKKEDLLNQHQLKASKLQGTISSIEDVSVLTDVDANTLAMLRGMLEDAQQELKNYKWMS

Homology

[Close]

BLAST of Lag0005930 vs. NCBI nr
Match: KAA0050733.1 (uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa] >TYJ95697.1 uncharacterized protein E5676_scaffold726G00240 [Cucumis melo var. makuwa])

HSP 1 Score: 164.5 bits (415), Expect = 2.5e-36
Identity = 106/291 (36.43%), Postives = 131/291 (45.02%), Query Frame = 0


Query: 1   MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKG 60
           MVYF E+ D  K CL+ILKD  Q +++G++L V +   EN   SQ   ++  +L +WSK 
Sbjct: 1   MVYFTEYSDSTKRCLIILKDGNQSLDSGIVLPVRKGAFENIIDSQVLKENFILLPKWSKE 60

Query: 61  RLMNQESSLKVWFLESPIHNK--------------------------------------- 120
           + +N  S L  WFLES IHNK                                       
Sbjct: 61  KSVNPNSPLTSWFLESSIHNKIPNENPESTLGCQMISDSKIRWGTVLKVHGEFYYLSHYW 120

Query: 121 ----LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAFCE------------------ 180
               L +ARN  ILK+ RLFD VM S+YTYDRN+DI++AFCE                  
Sbjct: 121 EWLELAVARNTAILKRDRLFDAVMASMYTYDRNSDIVRAFCEAWCPSTNTLHTSAGEMSI 180

Query: 181 -------------------------------------------ISLCPEVFKVASLMVEG 188
                                                      IS  PEVFKVASLM EG
Sbjct: 181 SLWDLWVLGGLPIKGVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEG 240

[Close]

BLAST of Lag0005930 vs. NCBI nr
Match: KAA0033822.1 (uncharacterized protein E6C27_scaffold1735G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 164.5 bits (415), Expect = 2.5e-36
Identity = 108/291 (37.11%), Postives = 132/291 (45.36%), Query Frame = 0


Query: 1   MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKG 60
           MVYF E+ D  K CL+ILKD  Q +++G++L V E   EN   SQ   ++  +L +WSK 
Sbjct: 1   MVYFTEYSDSTKRCLIILKDENQSLDSGIVLPVREEAFENIIDSQILKENFILLPKWSKE 60

Query: 61  RLMNQESSLKVWFLESPIHNK--------------------------------------- 120
           + +N  S L  WFLES IHNK                                       
Sbjct: 61  KSVNPNSPLTSWFLESSIHNKIPNENPESTLSRRMISDSKFRWGTVLKVHGEFYYLSHYW 120

Query: 121 ----LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAF-------------------- 180
               L +ARN  ILK+A LFD VM S+YTYDRN+DI++AF                    
Sbjct: 121 EWLELAVARNTAILKRAHLFDAVMASMYTYDRNSDIVRAFYKAWCSSTNTLHTSAGEMSI 180

Query: 181 ----------------------------------C-------EISLCPEVFKVASLMVEG 188
                                             C       +ISL PE FKVASLM EG
Sbjct: 181 SLWDLWVLGGLPIKGVAEEHKDKTYLAAFLSCWLCVFVFPDKQISLRPEEFKVASLMAEG 240

[Close]

BLAST of Lag0005930 vs. NCBI nr
Match: TYK21863.1 (uncharacterized protein E5676_scaffold836G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 164.5 bits (415), Expect = 2.5e-36
Identity = 108/291 (37.11%), Postives = 132/291 (45.36%), Query Frame = 0


Query: 1   MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKG 60
           MVYF E+ D  K CL+ILKD  Q +++G++L V E   EN   SQ   ++  +L +WSK 
Sbjct: 1   MVYFTEYSDSTKRCLIILKDENQSLDSGIVLPVREEAFENIIDSQILKENFILLPKWSKE 60

Query: 61  RLMNQESSLKVWFLESPIHNK--------------------------------------- 120
           + +N  S L  WFLES IHNK                                       
Sbjct: 61  KSVNPNSPLTSWFLESSIHNKIPNENPESTLSRRMISDSKFRWGTVLKVHGEFYYLSHYW 120

Query: 121 ----LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAF-------------------- 180
               L +ARN  ILK+A LFD VM S+YTYDRN+DI++AF                    
Sbjct: 121 EWLELAVARNTAILKRAHLFDAVMASMYTYDRNSDIVRAFYKAWCSSTNTLHTSAGEMSI 180

Query: 181 ----------------------------------C-------EISLCPEVFKVASLMVEG 188
                                             C       +ISL PE FKVASLM EG
Sbjct: 181 SLWDLWVLGGLPIKGVAEEHKDKTYLAAFLSCWLCVFVFPDKQISLRPEEFKVASLMAEG 240

[Close]

BLAST of Lag0005930 vs. NCBI nr
Match: TYK08451.1 (uncharacterized protein E5676_scaffold654G00670 [Cucumis melo var. makuwa])

HSP 1 Score: 152.1 bits (383), Expect = 1.3e-32
Identity = 96/226 (42.48%), Postives = 123/226 (54.42%), Query Frame = 0


Query: 1   MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKG 60
           MVYF E+ D  K CL+ILKD  Q +++G+IL V E   EN   SQ   D+  +L +WSK 
Sbjct: 1   MVYFTEYSDSTKRCLIILKDENQSLDSGIILPVREGAFENITDSQILKDNFILLPKWSKE 60

Query: 61  RL---MNQESSLK---VWFLESPIH---------NKLEIARNEMILKKARLFDGVMGSLY 120
           ++    + +  LK       +SP            +L +ARN  ILK+ARLFD VM S+Y
Sbjct: 61  KIDIGSSNDKQLKNSLEHCAQSPWRILLSHYWEWLELAVARNTTILKRARLFDVVMASMY 120

Query: 121 TYDRNTDIIQAFCEISLCPEV------------------------FKVASLMVEGYAFSL 180
           TYD N+DI++AFCE + CP                           KVASLM EG  FSL
Sbjct: 121 TYDCNSDIVRAFCE-AWCPSTNTLHTSAGEMSISLWDLWVLGGLPIKVASLMAEGDTFSL 180

Query: 181 VIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHY 188
            IPVLANIY  L  I+  +   G S ACF +HYV+ WLA Y NT+Y
Sbjct: 181 AIPVLANIYSGLRQIHDCTSSLGHSNACFPIHYVHGWLALYFNTYY 225

[Close]

BLAST of Lag0005930 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus])

HSP 1 Score: 130.2 bits (326), Expect = 5.2e-26
Identity = 110/394 (27.92%), Postives = 133/394 (33.76%), Query Frame = 0


Query: 1   MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKG 60
           MV+F E+ D  K CL+ILKD  Q +E G+IL V E  +EN   SQ   D+   L +WSK 
Sbjct: 1   MVHFTEYSDSTKRCLIILKDVDQSLEEGIILPVREGTYENIMDSQIPEDNFIFLPKWSKE 60

Query: 61  RLMNQESSLKVWFLESPIHNK--------------------------------------- 120
           R +N  SSLK WFLES IHNK                                       
Sbjct: 61  RFVNPNSSLKSWFLESSIHNKPPNEDPESTLGRRIINDPKIRWGNVLKVHGEFYYLPHYW 120

Query: 121 ----LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAFCE------------------ 180
               L +ARN  +LK+A LF+ VM SLYTYDRN+DI +AFCE                  
Sbjct: 121 EWLELVVARNTAVLKRASLFNAVMASLYTYDRNSDIDRAFCEAWCPSTNTLHTSAGEMSI 180

Query: 181 ------------------------------------------------------------ 188
                                                                       
Sbjct: 181 SLWDLWILGGLSIKGRFYEESIPCHQDLIGSPDVCPRSCEHLFAAYYRIVSQRMDHSQIT 240

[Close]

BLAST of Lag0005930 vs. ExPASy TrEMBL
Match: A0A5A7U4C3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00240 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-36
Identity = 106/291 (36.43%), Postives = 131/291 (45.02%), Query Frame = 0


Query: 1   MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKG 60
           MVYF E+ D  K CL+ILKD  Q +++G++L V +   EN   SQ   ++  +L +WSK 
Sbjct: 1   MVYFTEYSDSTKRCLIILKDGNQSLDSGIVLPVRKGAFENIIDSQVLKENFILLPKWSKE 60

Query: 61  RLMNQESSLKVWFLESPIHNK--------------------------------------- 120
           + +N  S L  WFLES IHNK                                       
Sbjct: 61  KSVNPNSPLTSWFLESSIHNKIPNENPESTLGCQMISDSKIRWGTVLKVHGEFYYLSHYW 120

Query: 121 ----LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAFCE------------------ 180
               L +ARN  ILK+ RLFD VM S+YTYDRN+DI++AFCE                  
Sbjct: 121 EWLELAVARNTAILKRDRLFDAVMASMYTYDRNSDIVRAFCEAWCPSTNTLHTSAGEMSI 180

Query: 181 -------------------------------------------ISLCPEVFKVASLMVEG 188
                                                      IS  PEVFKVASLM EG
Sbjct: 181 SLWDLWVLGGLPIKGVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEG 240

[Close]

BLAST of Lag0005930 vs. ExPASy TrEMBL
Match: A0A5A7SRI5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1735G00180 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-36
Identity = 108/291 (37.11%), Postives = 132/291 (45.36%), Query Frame = 0


Query: 1   MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKG 60
           MVYF E+ D  K CL+ILKD  Q +++G++L V E   EN   SQ   ++  +L +WSK 
Sbjct: 1   MVYFTEYSDSTKRCLIILKDENQSLDSGIVLPVREEAFENIIDSQILKENFILLPKWSKE 60

Query: 61  RLMNQESSLKVWFLESPIHNK--------------------------------------- 120
           + +N  S L  WFLES IHNK                                       
Sbjct: 61  KSVNPNSPLTSWFLESSIHNKIPNENPESTLSRRMISDSKFRWGTVLKVHGEFYYLSHYW 120

Query: 121 ----LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAF-------------------- 180
               L +ARN  ILK+A LFD VM S+YTYDRN+DI++AF                    
Sbjct: 121 EWLELAVARNTAILKRAHLFDAVMASMYTYDRNSDIVRAFYKAWCSSTNTLHTSAGEMSI 180

Query: 181 ----------------------------------C-------EISLCPEVFKVASLMVEG 188
                                             C       +ISL PE FKVASLM EG
Sbjct: 181 SLWDLWVLGGLPIKGVAEEHKDKTYLAAFLSCWLCVFVFPDKQISLRPEEFKVASLMAEG 240

[Close]

BLAST of Lag0005930 vs. ExPASy TrEMBL
Match: A0A5D3DEA3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold836G00160 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-36
Identity = 108/291 (37.11%), Postives = 132/291 (45.36%), Query Frame = 0


Query: 1   MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKG 60
           MVYF E+ D  K CL+ILKD  Q +++G++L V E   EN   SQ   ++  +L +WSK 
Sbjct: 1   MVYFTEYSDSTKRCLIILKDENQSLDSGIVLPVREEAFENIIDSQILKENFILLPKWSKE 60

Query: 61  RLMNQESSLKVWFLESPIHNK--------------------------------------- 120
           + +N  S L  WFLES IHNK                                       
Sbjct: 61  KSVNPNSPLTSWFLESSIHNKIPNENPESTLSRRMISDSKFRWGTVLKVHGEFYYLSHYW 120

Query: 121 ----LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAF-------------------- 180
               L +ARN  ILK+A LFD VM S+YTYDRN+DI++AF                    
Sbjct: 121 EWLELAVARNTAILKRAHLFDAVMASMYTYDRNSDIVRAFYKAWCSSTNTLHTSAGEMSI 180

Query: 181 ----------------------------------C-------EISLCPEVFKVASLMVEG 188
                                             C       +ISL PE FKVASLM EG
Sbjct: 181 SLWDLWVLGGLPIKGVAEEHKDKTYLAAFLSCWLCVFVFPDKQISLRPEEFKVASLMAEG 240

[Close]

BLAST of Lag0005930 vs. ExPASy TrEMBL
Match: A0A5D3C9B7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00670 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.2e-33
Identity = 96/226 (42.48%), Postives = 123/226 (54.42%), Query Frame = 0


Query: 1   MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKG 60
           MVYF E+ D  K CL+ILKD  Q +++G+IL V E   EN   SQ   D+  +L +WSK 
Sbjct: 1   MVYFTEYSDSTKRCLIILKDENQSLDSGIILPVREGAFENITDSQILKDNFILLPKWSKE 60

Query: 61  RL---MNQESSLK---VWFLESPIH---------NKLEIARNEMILKKARLFDGVMGSLY 120
           ++    + +  LK       +SP            +L +ARN  ILK+ARLFD VM S+Y
Sbjct: 61  KIDIGSSNDKQLKNSLEHCAQSPWRILLSHYWEWLELAVARNTTILKRARLFDVVMASMY 120

Query: 121 TYDRNTDIIQAFCEISLCPEV------------------------FKVASLMVEGYAFSL 180
           TYD N+DI++AFCE + CP                           KVASLM EG  FSL
Sbjct: 121 TYDCNSDIVRAFCE-AWCPSTNTLHTSAGEMSISLWDLWVLGGLPIKVASLMAEGDTFSL 180

Query: 181 VIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHY 188
            IPVLANIY  L  I+  +   G S ACF +HYV+ WLA Y NT+Y
Sbjct: 181 AIPVLANIYSGLRQIHDCTSSLGHSNACFPIHYVHGWLALYFNTYY 225

[Close]

BLAST of Lag0005930 vs. ExPASy TrEMBL
Match: A0A5A7T6J5 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G002150 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.4e-21
Identity = 65/152 (42.76%), Postives = 81/152 (53.29%), Query Frame = 0


Query: 81   KLEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAFCEISLCPE--------------- 140
            +L +ARN  +LK ARLF+ +M S+YTYDRN+DI++AFCE + CP                
Sbjct: 1176 ELAVARNTSVLKCARLFNAMMASMYTYDRNSDIVRAFCE-AWCPSTNTLHISSGEMSISL 1235

Query: 141  ----------------------------VFKVASLMVEGYAFSLVIPVLANIYHRLGHIY 190
                                        VFKVA LM EGY FSL IP+LANIY  L  I+
Sbjct: 1236 WDLWVIGGLLIKAYYHIASQRMDHSQIPVFKVAGLMAEGYTFSLAIPILANIYSGLCQIH 1295

The following BLAST results are available for this feature:

BLAST of Lag0005930 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050733.1	2.5e-36	36.43	uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa] >TYJ9...	[more]
KAA0033822.1	2.5e-36	37.11	uncharacterized protein E6C27_scaffold1735G00180 [Cucumis melo var. makuwa]	[more]
TYK21863.1	2.5e-36	37.11	uncharacterized protein E5676_scaffold836G00160 [Cucumis melo var. makuwa]	[more]
TYK08451.1	1.3e-32	42.48	uncharacterized protein E5676_scaffold654G00670 [Cucumis melo var. makuwa]	[more]
XP_031745312.1	5.2e-26	27.92	uncharacterized protein LOC116405439 [Cucumis sativus]	[more]

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BLAST of Lag0005930 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0005930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U4C3	1.2e-36	36.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SRI5	1.2e-36	37.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DEA3	1.2e-36	37.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C9B7	6.2e-33	42.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T6J5	2.4e-21	42.76	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G...	[more]

BLAST of Lag0005930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 495..515
None	No IPR available	COILS	Coil	Coil	coord: 429..466
None	No IPR available	PANTHER	PTHR36607	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 84..119 coord: 122..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0005930.1	Lag0005930.1	mRNA