
Lag0005928 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCGGCGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCACATTGAGGAAAAGTCAGTCTTCAACATCCGTCTTTGATCGCCTCAAAGTAGCAGACGATCAACCTCAAAGAAAGATGGATAACTTAAAGGTGAAATTGTTCGATGAAGTAAGCGTGACAAAAAGCTTCAAGTATGTCCCGTCACAATGAAAAGGAAGTTCTCTGTTCTCATAAATACAGAAGCTGGTTCCTCGAAGGTGAAGCCAAATCTCATTATCTTGACCAAATCCTGCAAATGAAGGATCTGATCAAGACCATGATAAAGATAAGGCTTTTAAAATATAAAAGCTCCTTATCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGTGCAAAAAAATTTGAACTACGTTATGACTTGATCCCTTTTCTTCAAAGGGTACGTAGGCAGCTTAAAGAAAACTTTAAGTTCAGTCTCTGCAAACAAAAAAAAAGGAAGTGCAACAAATATTGAAGCACGACAATATAAATTGAGGAAATTCATCACTACTGGGGGCAACACAACAAACTGAAGTTGTACATCGTTATAAATGTGAAGCTACGAGTTGAATGGATAAAAGAAGACTTCATTCCTCCAAATTCAATGTCTCGCTAGCCTCAAGTTCGGTGTTTCACTCACCCTAAGTTCGTTGTTCCCTCTTCTTCAAGTTTGAAGGTTCTCTCGTGCTTCGATGTCTCTTATCTCCAAGTTTGAAGAACGCAGTTCCTTCTATCAAAGTTTGAAGAAGGCTCATTCTCTCAAAGTTTGGAGGTTCCCGCTTCGCTGCAGTTCCTTGTCTCCAAGTTCGAAGGTTCTCCCACACGTCGCTGCAGTCCCTCTCTCAAATTTCGAAGGTTCTCACGTTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGATCTCCAAGTTTTCCTTCTCCCCAAGTTCGAAGGTTCTCATGTTGCTCCGCCGCAGTTCCTTCTTCCAAGTTCGAAGGTTCTCATCCGCTTCACTGGAGTTCTTTCTCCCAAGTTCGAAACTTCTCATGTGCTTTGTTGCAGCTCCTTCTCCAAGTCTGAATGTGTTTCTCTCTACCCCTCCTTTTAAAGGTTCGCCACTATGGTTCTCCTTCTCCAAGTGCGAAGGTTCACCGTTACTCCTTTTCAAATGTTTGGCGGTGGTTGACGGCCTCGCCTCGCTTCATCTTCAAATGTTGGCAGTTGACGGCGTCCGCTTCACTTCATCTTCAAAGGTTGGCGGTTGGCGGCTTCGACCTCGCTTCATCTTCAAAGGTTGGCAGCATCGCTTCATCTTCAAAGGTTCTCAGCCTCGCTTCATCTTCAAATGTTGGTAGTTGA ATGTTCGGCGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCACATTGAGGAAAAGTCAGTCTTCAACATCCGTCTTTGATCGCCTCAAAGTAGCAGACGATCAACCTCAAAGAAAGATGGATAACTTAAAGGTGAAATTGTTCGATGAAGATCTGATCAAGACCATGATAAAGATAAGGCTTTTAAAATATAAAAGCTCCTTATCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTTCTCTCGTGCTTCGATGTCTCTTATCTCCAAGTTTGAAGAACGCAGTTCCTTCTATCAAAGTTTGAAGAAGGCTCATTCTCTCAAAGTTTGGAGGTTCCCGCTTCGCTGCAGTTCCTTGTCTCCAAGTTCGAAGGTTCTCCCACACGTCGCTGCAGTCCCTCTCTCAAATTTCGAAGGTTCTCACGTTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGATCTCCAAGTTTTCCTTCTCCCCAAGTTCGAAGGTTCTCATGTTGCTCCGCCGCAGTTCCTTCTTCCAAGTTCGAAGGTTCGCCACTATGGTTCTCCTTCTCCAAGTGCGAAGGTTCACCGTTACTCCTTTTCAAATGTTTGGCGGTGGTTGACGGCCTCGCCTCGCTTCATCTTCAAATGTTGGCAGTTGACGGCGTCCGCTTCACTTCATCTTCAAAGGTTGGCGGTTGGCGGCTTCGACCTCGCTTCATCTTCAAAGGTTGGCAGCATCGCTTCATCTTCAAAGGTTCTCAGCCTCGCTTCATCTTCAAATGTTGGTAGTTGA ATGTTCGGCGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCACATTGAGGAAAAGTCAGTCTTCAACATCCGTCTTTGATCGCCTCAAAGTAGCAGACGATCAACCTCAAAGAAAGATGGATAACTTAAAGGTGAAATTGTTCGATGAAGATCTGATCAAGACCATGATAAAGATAAGGCTTTTAAAATATAAAAGCTCCTTATCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTTCTCTCGTGCTTCGATGTCTCTTATCTCCAAGTTTGAAGAACGCAGTTCCTTCTATCAAAGTTTGAAGAAGGCTCATTCTCTCAAAGTTTGGAGGTTCCCGCTTCGCTGCAGTTCCTTGTCTCCAAGTTCGAAGGTTCTCCCACACGTCGCTGCAGTCCCTCTCTCAAATTTCGAAGGTTCTCACGTTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGATCTCCAAGTTTTCCTTCTCCCCAAGTTCGAAGGTTCTCATGTTGCTCCGCCGCAGTTCCTTCTTCCAAGTTCGAAGGTTCGCCACTATGGTTCTCCTTCTCCAAGTGCGAAGGTTCACCGTTACTCCTTTTCAAATGTTTGGCGGTGGTTGACGGCCTCGCCTCGCTTCATCTTCAAATGTTGGCAGTTGACGGCGTCCGCTTCACTTCATCTTCAAAGGTTGGCGGTTGGCGGCTTCGACCTCGCTTCATCTTCAAAGGTTGGCAGCATCGCTTCATCTTCAAAGGTTCTCAGCCTCGCTTCATCTTCAAATGTTGGTAGTTGA MFGVHLHSTFSFPKAKCLTLRKSQSSTSVFDRLKVADDQPQRKMDNLKVKLFDEDLIKTMIKIRLLKYKSSLSQEPKLHDAPSPHELKRFSRASMSLISKFEERSSFYQSLKKAHSLKVWRFPLRCSSLSPSSKVLPHVAAVPLSNFEGSHVASLQFLPPSSKDLQVFLLPKFEGSHVAPPQFLLPSSKVRHYGSPSPSAKVHRYSFSNVWRWLTASPRFIFKCWQLTASASLHLQRLAVGGFDLASSSKVGSIASSSKVLSLASSSNVGS Homology
BLAST of Lag0005928 vs. NCBI nr
Match: KAA0051997.1 (hypothetical protein E6C27_scaffold60G004810 [Cucumis melo var. makuwa] >TYK04562.1 hypothetical protein E5676_scaffold409G001950 [Cucumis melo var. makuwa]) HSP 1 Score: 59.7 bits (143), Expect = 4.5e-05 Identity = 38/88 (43.18%), Postives = 51/88 (57.95%), Query Frame = 0
BLAST of Lag0005928 vs. NCBI nr
Match: KAA0056218.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 59.7 bits (143), Expect = 4.5e-05 Identity = 41/92 (44.57%), Postives = 54/92 (58.70%), Query Frame = 0
BLAST of Lag0005928 vs. NCBI nr
Match: KAA0065966.1 (hypothetical protein E6C27_scaffold62G00430 [Cucumis melo var. makuwa]) HSP 1 Score: 58.2 bits (139), Expect = 1.3e-04 Identity = 39/96 (40.62%), Postives = 58/96 (60.42%), Query Frame = 0
BLAST of Lag0005928 vs. NCBI nr
Match: TYK26726.1 (hypothetical protein E5676_scaffold124G00100 [Cucumis melo var. makuwa]) HSP 1 Score: 56.2 bits (134), Expect = 5.0e-04 Identity = 52/142 (36.62%), Postives = 74/142 (52.11%), Query Frame = 0
BLAST of Lag0005928 vs. ExPASy TrEMBL
Match: A0A5A7UC34 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001950 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.2e-05 Identity = 38/88 (43.18%), Postives = 51/88 (57.95%), Query Frame = 0
BLAST of Lag0005928 vs. ExPASy TrEMBL
Match: A0A5A7UM99 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold731G00010 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.2e-05 Identity = 41/92 (44.57%), Postives = 54/92 (58.70%), Query Frame = 0
BLAST of Lag0005928 vs. ExPASy TrEMBL
Match: A0A5A7VHY3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold62G00430 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 6.4e-05 Identity = 39/96 (40.62%), Postives = 58/96 (60.42%), Query Frame = 0
BLAST of Lag0005928 vs. ExPASy TrEMBL
Match: A0A5D3DSN6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00100 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 2.4e-04 Identity = 52/142 (36.62%), Postives = 74/142 (52.11%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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