Lag0005911 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0005911
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr6: 33629766 .. 33631290 (+)
RNA-Seq ExpressionLag0005911
SyntenyLag0005911
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACATGGAGGGCAACTTCAAAGTTTGCGGGATGGGGTCCAAGAGTGACCACGGCGATGGTAGGGAGACGAAGGAGGAGATTTCCAGAGAGCAAGCTGAGGGATCTCACACCGAAAAATCACAGGACAACCCGAGAGAAGTGACTTTAAACTCGAAAGGAAACGAAAGGGAAACGGGAGAAGAAGCCATCCTTAACCAGATGGAGAAACTGAAACTTGAAGAGAAACATAGAATAGTCAACATAGAAGATGAAGATATTGAGGATACAGACAGAGACCTCAAAAACGTGGTGGCCTGCAAGATCATGGCGACGAAGTTGATAAACGAAGAATATTTCAGCCTGATGATGCCGAGAATATGGGGTCTAGAGGGTCATGTGAGGATTGAAAAGACCGGAAGGAATATCTTCGAGTGCAAGTTTAGATCCCAGAGAGACAAAGTTAGAATAACCAAAGGGGGGCCTTGGAGTTTTGACGATGCTATCTTAGTGTTCGAAGATCTTAAGGGAAATAGAAGCATAGATATGATGGAGTTCAGGTATGCTTCGTTCTGGGTCCACTTCCAAAACTTACCAAAAGTCTGTTTTTGCAGGAAGTACGCTGAGGCGCTTGCAAATTCTATTGGCTCCTTTGAAGAAGCCGATCATGATGATGATGGGAGGATGGGGGGAGAGACTCTAAGGGTGAGAGTTAAAATGGATGTAAACCAACCTCTACGGCGGGGTACTAACATTAAGACCGGCACAGGAGGGGACTCAAAGTGGATCCCAGTCACTTACGAAAAGCTACCCGATTTTTGCTATTATTGCGGCAAGTTAGGTCATGGGTTTCAGGAATGCAGAGAGGATGGTGCTGATGATAAAGCAACGTTAATGTTTGGGGTCACCATGAGAGAAAATCAGCAAAGTAAAGGAGTGTACAAAGGTGGCAAATCAAATCACAGAAACCAGTTCTTCAGGGGTAGAGGTAGAGGCAGAAGCAGGGGTGACTGGAGGAGTGATCAAAATTGGAGAGATGGAAACTACGAGGGACAAGAATCGACGATGCCCACAACAAAAGCGAGGTAAAGGAAAACACAAGAGTAGCTGGCCGGAACAGTAAACCTGGGGAGGAAGTCAAGCAACAAACGCTCGGAAAAGACAAGGGTAAGGGGGTAATTTCAGCAAAACAAAACAAGACAGAGGATATAATATTATTGGAAACAGAGCCCATTCTAGCCGTTGGACAATAGCAAGTACAGAGTTGGCAGCAAGGGATAAAGTCTGGCAATGAGATGGAAACTGTCAGTGAAGGACATAAGGATTTCTCCAAAAGGTTTGAAAAGGCAGTCGGTGGAGAAAGTATGACAAAAAACGGGCCTTGCGAGGAGGCCTCCATCAGGTTGAGCCCAAAAAGCAAAGGGAAAGAATCCAAAAGAACACAGTCGCTGAAACAGCTCCAAAGAGGAAAGTCTCCTCATCTCAGCCCGGAAAAAATAGCTACCAGCCTGAAAAGATGGAAAAGGTTGGCCCGAAAAGAGACTGA

mRNA sequence

ATGGACATGGAGGGCAACTTCAAAGTTTGCGGGATGGGGTCCAAGAGTGACCACGGCGATGGTAGGGAGACGAAGGAGGAGATTTCCAGAGAGCAAGCTGAGGGATCTCACACCGAAAAATCACAGGACAACCCGAGAGAAGTGACTTTAAACTCGAAAGGAAACGAAAGGGAAACGGGAGAAGAAGCCATCCTTAACCAGATGGAGAAACTGAAACTTGAAGAGAAACATAGAATAGTCAACATAGAAGATGAAGATATTGAGGATACAGACAGAGACCTCAAAAACGTGGTGGCCTGCAAGATCATGGCGACGAAGTTGATAAACGAAGAATATTTCAGCCTGATGATGCCGAGAATATGGGGTCTAGAGGGTCATGTGAGGATTGAAAAGACCGGAAGGAATATCTTCGAGTGCAAGTTTAGATCCCAGAGAGACAAAGTTAGAATAACCAAAGGGGGGCCTTGGAGTTTTGACGATGCTATCTTAGTGTTCGAAGATCTTAAGGGAAATAGAAGCATAGATATGATGGAGTTCAGGTATGCTTCGTTCTGGGTCCACTTCCAAAACTTACCAAAAGTCTGTTTTTGCAGGAAGTACGCTGAGGCGCTTGCAAATTCTATTGGCTCCTTTGAAGAAGCCGATCATGATGATGATGGGAGGATGGGGGGAGAGACTCTAAGGGTGAGAGTTAAAATGGATGTAAACCAACCTCTACGGCGGGGTACTAACATTAAGACCGGCACAGGAGGGGACTCAAAGTGGATCCCAGTCACTTACGAAAAGCTACCCGATTTTTGCTATTATTGCGGCAAGTTAGGTCATGGGTTTCAGGAATGCAGAGAGGATGGTGCTGATGATAAAGCAACGTTAATGTTTGGGGTCACCATGAGAGAAAATCAGCAAAGTAAAGGAGTGTACAAAGGTGGCAAATCAAATCACAGAAACCAGTTCTTCAGGGGTAGAGGTAGAGGCAGAAGCAGGGGTGACTGGAGGAGTGATCAAAATTGGAGAGATGGAAACTACGAGGGACAAGAATCGACGATGCCCACAACAAAAGCGAGTCGGTGGAGAAAGTATGACAAAAAACGGGCCTTGCGAGGAGGCCTCCATCAGGTTGAGCCCAAAAAGCAAAGGGAAAGAATCCAAAAGAACACAGTCGCTGAAACAGCTCCAAAGAGGAAAGTCTCCTCATCTCAGCCCGGAAAAAATAGCTACCAGCCTGAAAAGATGGAAAAGGTTGGCCCGAAAAGAGACTGA

Coding sequence (CDS)

ATGGACATGGAGGGCAACTTCAAAGTTTGCGGGATGGGGTCCAAGAGTGACCACGGCGATGGTAGGGAGACGAAGGAGGAGATTTCCAGAGAGCAAGCTGAGGGATCTCACACCGAAAAATCACAGGACAACCCGAGAGAAGTGACTTTAAACTCGAAAGGAAACGAAAGGGAAACGGGAGAAGAAGCCATCCTTAACCAGATGGAGAAACTGAAACTTGAAGAGAAACATAGAATAGTCAACATAGAAGATGAAGATATTGAGGATACAGACAGAGACCTCAAAAACGTGGTGGCCTGCAAGATCATGGCGACGAAGTTGATAAACGAAGAATATTTCAGCCTGATGATGCCGAGAATATGGGGTCTAGAGGGTCATGTGAGGATTGAAAAGACCGGAAGGAATATCTTCGAGTGCAAGTTTAGATCCCAGAGAGACAAAGTTAGAATAACCAAAGGGGGGCCTTGGAGTTTTGACGATGCTATCTTAGTGTTCGAAGATCTTAAGGGAAATAGAAGCATAGATATGATGGAGTTCAGGTATGCTTCGTTCTGGGTCCACTTCCAAAACTTACCAAAAGTCTGTTTTTGCAGGAAGTACGCTGAGGCGCTTGCAAATTCTATTGGCTCCTTTGAAGAAGCCGATCATGATGATGATGGGAGGATGGGGGGAGAGACTCTAAGGGTGAGAGTTAAAATGGATGTAAACCAACCTCTACGGCGGGGTACTAACATTAAGACCGGCACAGGAGGGGACTCAAAGTGGATCCCAGTCACTTACGAAAAGCTACCCGATTTTTGCTATTATTGCGGCAAGTTAGGTCATGGGTTTCAGGAATGCAGAGAGGATGGTGCTGATGATAAAGCAACGTTAATGTTTGGGGTCACCATGAGAGAAAATCAGCAAAGTAAAGGAGTGTACAAAGGTGGCAAATCAAATCACAGAAACCAGTTCTTCAGGGGTAGAGGTAGAGGCAGAAGCAGGGGTGACTGGAGGAGTGATCAAAATTGGAGAGATGGAAACTACGAGGGACAAGAATCGACGATGCCCACAACAAAAGCGAGTCGGTGGAGAAAGTATGACAAAAAACGGGCCTTGCGAGGAGGCCTCCATCAGGTTGAGCCCAAAAAGCAAAGGGAAAGAATCCAAAAGAACACAGTCGCTGAAACAGCTCCAAAGAGGAAAGTCTCCTCATCTCAGCCCGGAAAAAATAGCTACCAGCCTGAAAAGATGGAAAAGGTTGGCCCGAAAAGAGACTGA

Protein sequence

MDMEGNFKVCGMGSKSDHGDGRETKEEISREQAEGSHTEKSQDNPREVTLNSKGNERETGEEAILNQMEKLKLEEKHRIVNIEDEDIEDTDRDLKNVVACKIMATKLINEEYFSLMMPRIWGLEGHVRIEKTGRNIFECKFRSQRDKVRITKGGPWSFDDAILVFEDLKGNRSIDMMEFRYASFWVHFQNLPKVCFCRKYAEALANSIGSFEEADHDDDGRMGGETLRVRVKMDVNQPLRRGTNIKTGTGGDSKWIPVTYEKLPDFCYYCGKLGHGFQECREDGADDKATLMFGVTMRENQQSKGVYKGGKSNHRNQFFRGRGRGRSRGDWRSDQNWRDGNYEGQESTMPTTKASRWRKYDKKRALRGGLHQVEPKKQRERIQKNTVAETAPKRKVSSSQPGKNSYQPEKMEKVGPKRD
Homology
BLAST of Lag0005911 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 166.8 bits (421), Expect = 4.1e-37
Identity = 95/270 (35.19%), Postives = 136/270 (50.37%), Query Frame = 0

Query: 90  TDRDLKNVVACKIMATKLINEEYFSLMMPRIWGLEGHVRIEKTGRNIFECKFRSQRDKVR 149
           T  ++K  V  K+  +K I+ E    +M  +W +    R E  G NI+   F+S  +K R
Sbjct: 31  TADNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSR 90

Query: 150 ITKGGPWSFDDAILVFEDLKGNRSIDMMEFRYASFWVHFQNLPKVCFCRKYAEALANSIG 209
           +   GPW+F+ ++LV            M F + +FW+   N+P  C   + A  L   +G
Sbjct: 91  VLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLG 150

Query: 210 SFEEADHDDDGRMGGETLRVRVKMDVNQPLRRGTNIKTGTGGDSKWIPVTYEKLPDFCYY 269
             EE + D      G  +RVRVK+DV++PLRRG  +K   G D  W P+ YEKLPDFCY 
Sbjct: 151 DVEEIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKLKNSDGKDI-WCPLRYEKLPDFCYE 210

Query: 270 CGKLGHGFQEC--REDGADDKATLMFGVTMRENQQSKGV--------YKGGKSNHRNQFF 329
           CGK+GH  +EC  R       +   +G  +R     K V        ++GG+    +Q  
Sbjct: 211 CGKIGHSGRECEQRSKVVTTNSPEQYGDWLRATLLKKSVSHPEEEVFWRGGRFGRGHQVN 270

Query: 330 RGRGRGRSRGDW-RSDQNWRDGNYEGQEST 349
            GRG    RGDW R D+NWRD   +G ES+
Sbjct: 271 GGRG---GRGDWRRRDENWRD--IDGPESS 294

BLAST of Lag0005911 vs. NCBI nr
Match: TXG54013.1 (hypothetical protein EZV62_019269 [Acer yangbiense])

HSP 1 Score: 159.5 bits (402), Expect = 6.5e-35
Identity = 83/253 (32.81%), Postives = 133/253 (52.57%), Query Frame = 0

Query: 64  ILNQMEKLKLEEKH-RIVNIEDEDIEDTDRDLKNVVACKIMATKLINEEYFSLMMPRIWG 123
           I  + EKL L++ +  I  I+    E  ++ L   +  K +  K+IN E F   +  IW 
Sbjct: 6   ISRKCEKLSLDDDNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKSTISTIWQ 65

Query: 124 LEGHVRIEKTGRNIFECKFRSQRDKVRITKGGPWSFDDAILVFEDLKGNRSIDMMEFRYA 183
            +  V +E  G NIF+ +F++  D+ RI +GGPW FD  +LV  +  G+  +  ++FRY 
Sbjct: 66  TKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDLQFRYV 125

Query: 184 SFWVHFQNLPKVCFCRKYAEALANSIGSFEEADHDDDGRMGGETLRVRVKMDVNQPLRRG 243
            FW+   NLP  C  R+    L   +G  +E D  + G   G+ +R+RV +DV  PL+RG
Sbjct: 126 PFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVLIDVMNPLKRG 185

Query: 244 TNIKTGTGGDSKWIPVTYEKLPDFCYYCGKLGHGFQECREDGAD--DKATLMFGVTMREN 303
             +  G       + + YE+LP+FCYYCGK+GH  ++C  +  +    ++  FG  MR  
Sbjct: 186 LRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSSFKFGPWMRAV 245

Query: 304 QQSKGVYKGGKSN 314
            +++    G K N
Sbjct: 246 SRTRSKGTGEKKN 258

BLAST of Lag0005911 vs. NCBI nr
Match: XP_024955847.1 (uncharacterized protein LOC112498636 [Citrus sinensis])

HSP 1 Score: 158.3 bits (399), Expect = 1.4e-34
Identity = 92/262 (35.11%), Postives = 136/262 (51.91%), Query Frame = 0

Query: 95  KNVVAC----KIMATKLINEEYFSLMMPRIWGLEGHVRIEKTGRNIFECKFRSQRDKVRI 154
           + + AC    KIM  + +N E     M +IW     VRIE  G NIF  KF  + DK R+
Sbjct: 34  EQIAACCLVGKIMHQRGVNLEGLRSAMLQIWRTNKEVRIESLGSNIFMFKFAVEADKKRV 93

Query: 155 TKGGPWSFDDAILVFEDLKGNRSIDMMEFRYASFWVHFQNLPKVCFCRKYAEALANSIGS 214
             GGPW FD A++V  + KG   I    F +  FWVH +N+P     R   + L   IGS
Sbjct: 94  MGGGPWHFDGALMVLTEPKGIGDIANQSFTHTLFWVHLRNMPITWMHRDMVQELGEYIGS 153

Query: 215 FEEADHDDDGRMGGETLRVRVKMDVNQPLRRGTNIKTGTGGDSKWIPVTYEKLPDFCYYC 274
            EE D D++G   G+  R+R+ +D+ +PLR+   ++T   G S  IP+ YE+LPDFC+ C
Sbjct: 154 VEEIDTDEEGNCIGKIARLRISVDITKPLRKFLEVETEDEG-SIPIPILYERLPDFCFCC 213

Query: 275 GKLGHGFQECREDGADDKATLMFGVTMRENQQSKGVYKGGK---SNHRNQFFRGRGRGRS 334
           G +GH ++EC E     K  L +G  M+   +   + +  +      +NQF +G G   +
Sbjct: 214 GLIGHQYKECIEYKGQPKKDLPYGYWMKATTRFGKLKQNCRDKWQREQNQFKKGDGASDT 273

Query: 335 RGDWRSDQNWRDGNYE-GQEST 349
           +   +   + RD   E G ES+
Sbjct: 274 QSQQKMQNSQRDPETEYGSESS 294

BLAST of Lag0005911 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 157.5 bits (397), Expect = 2.5e-34
Identity = 83/258 (32.17%), Postives = 140/258 (54.26%), Query Frame = 0

Query: 62  EAILNQMEKLKL--EEKHRIVNIEDEDIEDTDRDLKNVVACKIMATKLINEEYFSLMMPR 121
           E +L   +K KL  EE    ++++ + ++  ++ L   +  K++A ++I+ +  S ++  
Sbjct: 4   ENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLL 63

Query: 122 IWGLEGHVRIEKTGRNIFECKFRSQRDKVRITKGGPWSFDDAILVFEDLKGNRSIDMMEF 181
            W +E  + +E  G+N+F   F  + D  R+ K GPW FD A++V +    +++I  +EF
Sbjct: 64  AWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEF 123

Query: 182 RYASFWVHFQNLPKVCFCRKYAEALANSIGSFEEADHDDDGRMGGETLRVRVKMDVNQPL 241
              +FW+H  +LP     +  A  L N+IG+F + D ++ G   G +LR+RV +D+ +PL
Sbjct: 124 NRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPL 183

Query: 242 RRGTNIKTGTGGDSKWIPVTYEKLPDFCYYCGKLGHGFQEC------REDGADDKATLMF 301
           RRG  I         WIP+ YE+LPDFCY+CG +GH   +C       +D  D +AT  +
Sbjct: 184 RRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQD--DSRATSEY 243

Query: 302 GVTMRENQQSKGVYKGGK 312
           G  +R      G  KG K
Sbjct: 244 GPWLRFVGSKAGAQKGRK 259

BLAST of Lag0005911 vs. NCBI nr
Match: XP_015382410.1 (uncharacterized protein LOC107175497 [Citrus sinensis])

HSP 1 Score: 156.8 bits (395), Expect = 4.2e-34
Identity = 80/208 (38.46%), Postives = 112/208 (53.85%), Query Frame = 0

Query: 95  KNVVAC----KIMATKLINEEYFSLMMPRIWGLEGHVRIEKTGRNIFECKFRSQRDKVRI 154
           + + AC    KIM  + +N E     M +IW     VRIE  G NIF  KF  + DK R+
Sbjct: 34  EQIAACCLVGKIMHQRGVNLEGLRSAMLQIWRTNKEVRIESLGSNIFMFKFAVEADKKRV 93

Query: 155 TKGGPWSFDDAILVFEDLKGNRSIDMMEFRYASFWVHFQNLPKVCFCRKYAEALANSIGS 214
             GGPW FD A++V  + KG   I    F +  FWVH +N+P     R   + L   IGS
Sbjct: 94  MGGGPWHFDGALMVLTEPKGIGDIANQSFTHTLFWVHLRNMPITWMHRDMVQELGEYIGS 153

Query: 215 FEEADHDDDGRMGGETLRVRVKMDVNQPLRRGTNIKTGTGGDSKWIPVTYEKLPDFCYYC 274
            E+ D D +G   GE  R+R+ +D+ +PLR+   ++T     S  IP+ YE+LPDFC+ C
Sbjct: 154 VEDIDTDKEGNCIGEIARLRISVDITKPLRKFLEVET-EDECSIPIPILYERLPDFCFCC 213

Query: 275 GKLGHGFQECREDGADDKATLMFGVTMR 299
           G +GH ++EC E     K  L +G  M+
Sbjct: 214 GLIGHQYKECIEYKGQPKKDLPYGYWMK 240

BLAST of Lag0005911 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.0e-37
Identity = 95/270 (35.19%), Postives = 136/270 (50.37%), Query Frame = 0

Query: 90  TDRDLKNVVACKIMATKLINEEYFSLMMPRIWGLEGHVRIEKTGRNIFECKFRSQRDKVR 149
           T  ++K  V  K+  +K I+ E    +M  +W +    R E  G NI+   F+S  +K R
Sbjct: 31  TADNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSR 90

Query: 150 ITKGGPWSFDDAILVFEDLKGNRSIDMMEFRYASFWVHFQNLPKVCFCRKYAEALANSIG 209
           +   GPW+F+ ++LV            M F + +FW+   N+P  C   + A  L   +G
Sbjct: 91  VLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLG 150

Query: 210 SFEEADHDDDGRMGGETLRVRVKMDVNQPLRRGTNIKTGTGGDSKWIPVTYEKLPDFCYY 269
             EE + D      G  +RVRVK+DV++PLRRG  +K   G D  W P+ YEKLPDFCY 
Sbjct: 151 DVEEIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKLKNSDGKDI-WCPLRYEKLPDFCYE 210

Query: 270 CGKLGHGFQEC--REDGADDKATLMFGVTMRENQQSKGV--------YKGGKSNHRNQFF 329
           CGK+GH  +EC  R       +   +G  +R     K V        ++GG+    +Q  
Sbjct: 211 CGKIGHSGRECEQRSKVVTTNSPEQYGDWLRATLLKKSVSHPEEEVFWRGGRFGRGHQVN 270

Query: 330 RGRGRGRSRGDW-RSDQNWRDGNYEGQEST 349
            GRG    RGDW R D+NWRD   +G ES+
Sbjct: 271 GGRG---GRGDWRRRDENWRD--IDGPESS 294

BLAST of Lag0005911 vs. ExPASy TrEMBL
Match: A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.1e-35
Identity = 83/253 (32.81%), Postives = 133/253 (52.57%), Query Frame = 0

Query: 64  ILNQMEKLKLEEKH-RIVNIEDEDIEDTDRDLKNVVACKIMATKLINEEYFSLMMPRIWG 123
           I  + EKL L++ +  I  I+    E  ++ L   +  K +  K+IN E F   +  IW 
Sbjct: 6   ISRKCEKLSLDDDNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKSTISTIWQ 65

Query: 124 LEGHVRIEKTGRNIFECKFRSQRDKVRITKGGPWSFDDAILVFEDLKGNRSIDMMEFRYA 183
            +  V +E  G NIF+ +F++  D+ RI +GGPW FD  +LV  +  G+  +  ++FRY 
Sbjct: 66  TKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDLQFRYV 125

Query: 184 SFWVHFQNLPKVCFCRKYAEALANSIGSFEEADHDDDGRMGGETLRVRVKMDVNQPLRRG 243
            FW+   NLP  C  R+    L   +G  +E D  + G   G+ +R+RV +DV  PL+RG
Sbjct: 126 PFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVLIDVMNPLKRG 185

Query: 244 TNIKTGTGGDSKWIPVTYEKLPDFCYYCGKLGHGFQECREDGAD--DKATLMFGVTMREN 303
             +  G       + + YE+LP+FCYYCGK+GH  ++C  +  +    ++  FG  MR  
Sbjct: 186 LRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSSFKFGPWMRAV 245

Query: 304 QQSKGVYKGGKSN 314
            +++    G K N
Sbjct: 246 SRTRSKGTGEKKN 258

BLAST of Lag0005911 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-34
Identity = 83/258 (32.17%), Postives = 140/258 (54.26%), Query Frame = 0

Query: 62  EAILNQMEKLKL--EEKHRIVNIEDEDIEDTDRDLKNVVACKIMATKLINEEYFSLMMPR 121
           E +L   +K KL  EE    ++++ + ++  ++ L   +  K++A ++I+ +  S ++  
Sbjct: 4   ENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLL 63

Query: 122 IWGLEGHVRIEKTGRNIFECKFRSQRDKVRITKGGPWSFDDAILVFEDLKGNRSIDMMEF 181
            W +E  + +E  G+N+F   F  + D  R+ K GPW FD A++V +    +++I  +EF
Sbjct: 64  AWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEF 123

Query: 182 RYASFWVHFQNLPKVCFCRKYAEALANSIGSFEEADHDDDGRMGGETLRVRVKMDVNQPL 241
              +FW+H  +LP     +  A  L N+IG+F + D ++ G   G +LR+RV +D+ +PL
Sbjct: 124 NRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPL 183

Query: 242 RRGTNIKTGTGGDSKWIPVTYEKLPDFCYYCGKLGHGFQEC------REDGADDKATLMF 301
           RRG  I         WIP+ YE+LPDFCY+CG +GH   +C       +D  D +AT  +
Sbjct: 184 RRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQD--DSRATSEY 243

Query: 302 GVTMRENQQSKGVYKGGK 312
           G  +R      G  KG K
Sbjct: 244 GPWLRFVGSKAGAQKGRK 259

BLAST of Lag0005911 vs. ExPASy TrEMBL
Match: W9RRS1 (CCHC-type domain-containing protein OS=Morus notabilis OX=981085 GN=L484_024909 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 7.7e-34
Identity = 83/251 (33.07%), Postives = 133/251 (52.99%), Query Frame = 0

Query: 62  EAILNQMEKLKLEEKHR-IVNIEDEDIEDTDRDLKNVVACKIMATKLINEEYFSLMMPRI 121
           E I N+ +   +EE+   +V +++  +E+  + +K  +  K++++K  N+ +F   M  I
Sbjct: 2   EDIANRWKSFSIEEEEEDVVGVDESVLEEGRKAMKCGLLGKLLSSKPYNKRFFQSTMIDI 61

Query: 122 WGLEGHVRIEKTGRNIFECKFRSQRDKVRITKGGPWSFDDAILVFEDLKGNRSIDMMEFR 181
           W + G V   +  +++F   F S RD+ R+    PWS D A++V + L+     D  +F 
Sbjct: 62  WRMPG-VESREVAKDVFFFSFASVRDRDRVLDMEPWSSDRALVVLKPLENGDMADSDDFC 121

Query: 182 YASFWVHFQNLPKVCFCRKYAEALANSIGSFEEADHDDDGRMGGETLRVRVKMDVNQPLR 241
           Y+ FWV   NLP      +  E + + IGS      DD GR  G+ +RVRV +D+ +P+R
Sbjct: 122 YSKFWVQLHNLPLEGRLSRIGEMVGDIIGSTVSVQQDDKGRCWGQYVRVRVVLDITKPIR 181

Query: 242 RGTNIKTGTGGDSKWIPVTYEKLPDFCYYCGKLGHGFQECREDG---ADDKATLMFGVTM 301
           R   I  G G    W  + YEKLPDFCY CGK GHG +EC  +G     D + L +G  +
Sbjct: 182 RQVKIILGDGEYLVWTDLRYEKLPDFCYGCGKFGHGTRECPAEGVAVVTDLSILPYGSWL 241

Query: 302 RENQQSKGVYK 309
           R  +   G ++
Sbjct: 242 RAPRMGGGSHR 251

BLAST of Lag0005911 vs. ExPASy TrEMBL
Match: W9RBJ0 (CCHC-type domain-containing protein OS=Morus notabilis OX=981085 GN=L484_024925 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 7.7e-34
Identity = 83/251 (33.07%), Postives = 133/251 (52.99%), Query Frame = 0

Query: 62  EAILNQMEKLKLEEKHR-IVNIEDEDIEDTDRDLKNVVACKIMATKLINEEYFSLMMPRI 121
           E I N+ +   +EE+   +V +++  +E+  + +K  +  K++++K  N+ +F   M  I
Sbjct: 2   EDIANRWKSFSIEEEEEDVVGVDESVLEEGRKAMKCGLLGKLLSSKPYNKRFFQSTMIDI 61

Query: 122 WGLEGHVRIEKTGRNIFECKFRSQRDKVRITKGGPWSFDDAILVFEDLKGNRSIDMMEFR 181
           W + G V   +  +++F   F S RD+ R+    PWS D A++V + L+     D  +F 
Sbjct: 62  WRMPG-VESREVAKDVFFFSFASVRDRDRVLDMEPWSSDRALVVLKPLENGDMADSDDFC 121

Query: 182 YASFWVHFQNLPKVCFCRKYAEALANSIGSFEEADHDDDGRMGGETLRVRVKMDVNQPLR 241
           Y+ FWV   NLP      +  E + + IGS      DD GR  G+ +RVRV +D+ +P+R
Sbjct: 122 YSKFWVQLHNLPLEGRLSRIGEMVGDIIGSTVSVQQDDKGRCWGQYVRVRVVLDITKPIR 181

Query: 242 RGTNIKTGTGGDSKWIPVTYEKLPDFCYYCGKLGHGFQECREDG---ADDKATLMFGVTM 301
           R   I  G G    W  + YEKLPDFCY CGK GHG +EC  +G     D + L +G  +
Sbjct: 182 RQVKIILGDGEYLVWTDLRYEKLPDFCYGCGKFGHGTRECPAEGVAVVTDLSILPYGSWL 241

Query: 302 RENQQSKGVYK 309
           R  +   G ++
Sbjct: 242 RAPRMGGGSHR 251

BLAST of Lag0005911 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 55.1 bits (131), Expect = 1.6e-07
Identity = 53/218 (24.31%), Postives = 85/218 (38.99%), Query Frame = 0

Query: 67  QMEKLKLEEKHRIVNIEDEDIEDTDRDLKNVVACKIMATKLINEEYFSLMMPRIWGLEGH 126
           QM+++ L  +   +N+  E  ++  R   N+ + +    K ++EE    ++ RI  LE H
Sbjct: 8   QMQEIALGVQEEAINLLIELCDEALRK-PNLASLQNRCPKNVDEE----VVGRI--LEIH 67

Query: 127 VRIEKTGRNIFECKFRSQRDKVRITKGGPWSFDDAILVFEDLKGNRSIDMMEFRYASFWV 186
                      E  F+S+     I + GPWSF+D + V +  +  +     EF+   FW+
Sbjct: 68  K---------IEFLFQSEESMFSILRRGPWSFNDWMCVIQ--RWTKLHSDAEFKRIPFWI 127

Query: 187 HFQNLPKVCFCRKYAEALANSIGSFEEADHDDDGRMGGETLRVRVKMDVNQPLRRGTNIK 246
             + +P     R     +  SIG                              R G  ++
Sbjct: 128 QIRGIP----LRFLTARIITSIGE-----------------------------RMGLFLE 174

Query: 247 TGTGGDSKWIPVTYEKLPDFCYYCGKLGHGFQECREDG 285
           T  G D   +   YEKL +FC  CG L H   EC   G
Sbjct: 188 TNLGRDVSVLKFQYEKLKNFCTTCGMLSHDASECPTSG 174

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022149484.14.1e-3735.19uncharacterized protein LOC111017902 [Momordica charantia][more]
TXG54013.16.5e-3532.81hypothetical protein EZV62_019269 [Acer yangbiense][more]
XP_024955847.11.4e-3435.11uncharacterized protein LOC112498636 [Citrus sinensis][more]
XP_022156185.12.5e-3432.17uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_015382410.14.2e-3438.46uncharacterized protein LOC107175497 [Citrus sinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D7652.0e-3735.19uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A5C7H9Y23.1e-3532.81CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01926... [more]
A0A6J1DU551.2e-3432.17uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
W9RRS17.7e-3433.07CCHC-type domain-containing protein OS=Morus notabilis OX=981085 GN=L484_024909 ... [more]
W9RBJ07.7e-3433.07CCHC-type domain-containing protein OS=Morus notabilis OX=981085 GN=L484_024925 ... [more]
Match NameE-valueIdentityDescription
AT3G42140.11.6e-0724.31zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..354
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 366..388
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 390..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..419
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 323..339
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 69..288
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 87..231
e-value: 7.6E-21
score: 74.2
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 233..281
e-value: 2.0E-14
score: 53.0
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 69..288
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 267..282
score: 9.174718
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 264..283

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0005911.1Lag0005911.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding