Lag0005845 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0005845
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase
Location	chr6: 31756635 .. 31757606 (-)
RNA-Seq Expression	Lag0005845
Synteny	Lag0005845

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCCAACTAAAGTTCCGGGGCTGGATGGCTTTCCAGCCCTTTTTTATCAGCATTACTGGAACACAGTGGGGGATAAAACAAACATTAACTGTCTGAAAATTCTAAATGAAGGGGGTAGTATTGAGGAGTGGAATGAAACGAATATTGTCCTTATCCCTAAAGTAAATAACCCAAAAATGGTTGGAGACTTTAGGCCTATAAGCCTATGTCATGTTAATTACAAAATTGTTACTAAAACCATAACTAATAGGCTGAAAGGTATCCTTAAAGACATTAAATCTCCCTCCCAATCAGCCTTTATCAAAGGAAGACTCATTTCAGATAATATTTTGGTTGGCCATGAATGTCTACATGCAATTAAGAACAACAAAACAATAATTAAAAACATGGCAGCCTTAAAACTTGATCTAAGTAAAGCCTATGATCGGGTTGAATGGGTCTTTCTTAGAGAAATTATGCTTAAATTAGGGTTTGACCTTAGGTGGGTAGACTTGATTCTAAGATGTATTTCTACGGCTAAATTCTGTGTGATTATTAATAAGGAAGCTAAAGGATGTTTTCATTCTAATAGAGGCCAAGGTGATCACTTGTCTCCATATCTCTTTCTTTTAGTTACTAAAGGTTTTTCTAGTTTAATAACAGGTGATACTAACAATGGAAGGCTCTCGGGTGGGAGTTGTTCACAAACAGGACCTTCTATCTCTCATTTGTTGTTTGCAGATGATAGTTTGGTATTTTGCAAAGTTGATGAGAATGAAATCAACCACCTTAAAGGATTGCTGGAAGTTTATGAGAAAGCATCAGGGGAAAACATTAATTACAATAAATCAGCTATGTTTTTCTCCAAGAGTGTGGACAGGGACAAACGGATATCTCTCAGCAATATTTTAGGAGTGGAAAGTGTGGAGAACATCGGCAACTACCTGGGTGCCCCTCAGAGTTTTCAAGGAACAAGTCCAGAGATTTAG

mRNA sequence

ATGTTCCCAACTAAAGTTCCGGGGCTGGATGGCTTTCCAGCCCTTTTTTATCAGCATTACTGGAACACAGTGGGGGATAAAACAAACATTAACTGTCTGAAAATTCTAAATGAAGGGGGTAGTATTGAGGAGTGGAATGAAACGAATATTGTCCTTATCCCTAAAGTAAATAACCCAAAAATGGTTGGAGACTTTAGGCCTATAAGCCTATGTCATGTTAATTACAAAATTGTTACTAAAACCATAACTAATAGGCTGAAAGGTGATACTAACAATGGAAGGCTCTCGGGTGGGAGTTGTTCACAAACAGGACCTTCTATCTCTCATTTGTTGTTTGCAGATGATAGTTTGGTATTTTGCAAAGTTGATGAGAATGAAATCAACCACCTTAAAGGATTGCTGGAAGTTTATGAGAAAGCATCAGGGGAAAACATTAATTACAATAAATCAGCTATGTTTTTCTCCAAGAGTGTGGACAGGGACAAACGGATATCTCTCAGCAATATTTTAGGAGTGGAAAGTGTGGAGAACATCGGCAACTACCTGGGTGCCCCTCAGAGTTTTCAAGGAACAAGTCCAGAGATTTAG

Coding sequence (CDS)

ATGTTCCCAACTAAAGTTCCGGGGCTGGATGGCTTTCCAGCCCTTTTTTATCAGCATTACTGGAACACAGTGGGGGATAAAACAAACATTAACTGTCTGAAAATTCTAAATGAAGGGGGTAGTATTGAGGAGTGGAATGAAACGAATATTGTCCTTATCCCTAAAGTAAATAACCCAAAAATGGTTGGAGACTTTAGGCCTATAAGCCTATGTCATGTTAATTACAAAATTGTTACTAAAACCATAACTAATAGGCTGAAAGGTGATACTAACAATGGAAGGCTCTCGGGTGGGAGTTGTTCACAAACAGGACCTTCTATCTCTCATTTGTTGTTTGCAGATGATAGTTTGGTATTTTGCAAAGTTGATGAGAATGAAATCAACCACCTTAAAGGATTGCTGGAAGTTTATGAGAAAGCATCAGGGGAAAACATTAATTACAATAAATCAGCTATGTTTTTCTCCAAGAGTGTGGACAGGGACAAACGGATATCTCTCAGCAATATTTTAGGAGTGGAAAGTGTGGAGAACATCGGCAACTACCTGGGTGCCCCTCAGAGTTTTCAAGGAACAAGTCCAGAGATTTAG

Protein sequence

MFPTKVPGLDGFPALFYQHYWNTVGDKTNINCLKILNEGGSIEEWNETNIVLIPKVNNPKMVGDFRPISLCHVNYKIVTKTITNRLKGDTNNGRLSGGSCSQTGPSISHLLFADDSLVFCKVDENEINHLKGLLEVYEKASGENINYNKSAMFFSKSVDRDKRISLSNILGVESVENIGNYLGAPQSFQGTSPEI

Homology

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BLAST of Lag0005845 vs. NCBI nr
Match: XP_024190234.1 (uncharacterized protein LOC112194221 [Rosa chinensis])

HSP 1 Score: 172.6 bits (436), Expect = 3.4e-39
Identity = 89/195 (45.64%), Postives = 116/195 (59.49%), Query Frame = 0


Query: 1   MFPTKVPGLDGFPALFYQHYWNTVGDKTNINCLKILNEGGSIEEWNETNIVLIPKVNNPK 60
           M P K PG DG  ALFY+HYW+ VGD+ +  CLK+LNEG S+E  N+T I LIPK+ +P 
Sbjct: 416 MAPNKSPGADGLSALFYKHYWHIVGDEVSFFCLKVLNEGASVESINQTLIALIPKIEHPH 475

Query: 61  MVGDFRPISLCHVNYKIVTKTITNRLKG----------DTNNGRLSGGSCSQTGPSISHL 120
            V DFRPISLC V YK+++KTI NR+KG              G + G       P ++HL
Sbjct: 476 CVTDFRPISLCSVLYKLISKTIVNRMKGFLFYGKDKLMACREGFIEGVQVRGNAPPVNHL 535

Query: 121 LFADDSLVFCKVDENEINHLKGLLEVYEKASGENINYNKSAMFFSKSVDRDKRISLSNIL 180
           LFADDSL+F       + HLK  L +YE A+G  +N+ KSA+ F  +VD   +  +  +L
Sbjct: 536 LFADDSLIFATARREVVTHLKQCLLLYEAAAG--VNFQKSAISFGPAVDEGVKSDIQEML 595

Query: 181 GVESVENIGNYLGAP 186
           GV  V     YLG P
Sbjct: 596 GVPVVPFHERYLGLP 608

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BLAST of Lag0005845 vs. NCBI nr
Match: XP_035539633.1 (uncharacterized protein LOC108982175 [Juglans regia])

HSP 1 Score: 163.7 bits (413), Expect = 1.6e-36
Identity = 94/232 (40.52%), Postives = 126/232 (54.31%), Query Frame = 0


Query: 1   MFPTKVPGLDGFPALFYQHYWNTVGDKTNINCLKILNEGGSIEEWNETNIVLIPKVNNPK 60
           M P   PG DGFPA FYQ +W  VG+K     LK+LN+GGS++E N+T I LIPKV NPK
Sbjct: 406 MNPLGSPGPDGFPAQFYQKHWEVVGEKVCNFALKVLNQGGSLKEVNDTFITLIPKVKNPK 465

Query: 61  MVGDFRPISLCHVNYKIVTKTITNRLKG------------------------------DT 120
            V DFRPISLC+V YKIV+KTI NRLK                                +
Sbjct: 466 RVTDFRPISLCNVIYKIVSKTIANRLKVILPKLISLNQSAFVPGRLISDNTLVAYEILHS 525

Query: 121 NNGRL---------SGGSCSQTGP--------SISHLLFADDSLVFCKVDENEINHLKGL 180
            N R+            +C    P        S++HL FADDSL+FC+    E+ H+  +
Sbjct: 526 MNSRMKEALTALLNQADACGVLTPVPIGRSPISVNHLFFADDSLLFCQAKAEELRHVLNI 585

Query: 181 LEVYEKASGENINYNKSAMFFSKSVDRDKRISLSNILGVESVENIGNYLGAP 186
           L++YEKASG+ IN +KS++FFS++  +  +  +  + GV+S      YLG P
Sbjct: 586 LDIYEKASGQVINKDKSSIFFSRNTGQAAQQQILELTGVKSCGTFDKYLGLP 637

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BLAST of Lag0005845 vs. NCBI nr
Match: KAF5470771.1 (hypothetical protein F2P56_011262, partial [Juglans regia])

HSP 1 Score: 160.2 bits (404), Expect = 1.8e-35
Identity = 93/232 (40.09%), Postives = 125/232 (53.88%), Query Frame = 0


Query: 1   MFPTKVPGLDGFPALFYQHYWNTVGDKTNINCLKILNEGGSIEEWNETNIVLIPKVNNPK 60
           M P   PG DGFPA FYQ +W  VG++     LK+LN+GGS++E N+T I LIPKV NPK
Sbjct: 112 MNPLGSPGPDGFPAQFYQKHWEVVGEQVCNFALKVLNQGGSLKEVNDTFITLIPKVKNPK 171

Query: 61  MVGDFRPISLCHVNYKIVTKTITNRLKG------------------------------DT 120
            V DFRPISLC+V YKIV+KTI NRLK                                +
Sbjct: 172 RVTDFRPISLCNVVYKIVSKTIANRLKVILPKLISLNQSAFVPGRLISDNTLVAYEILHS 231

Query: 121 NNGRL---------SGGSCSQTGP--------SISHLLFADDSLVFCKVDENEINHLKGL 180
            N R+            +C    P        S++HL FADDSL FC+    E+ H+  +
Sbjct: 232 MNSRMKEALTALLNQAEACGVLTPVPIGRSPISVNHLFFADDSLFFCQAKAEELRHVLNI 291

Query: 181 LEVYEKASGENINYNKSAMFFSKSVDRDKRISLSNILGVESVENIGNYLGAP 186
           L++YEKASG+ IN +KS++FFS++  +  +  +  + GV+S      YLG P
Sbjct: 292 LDIYEKASGKVINKDKSSIFFSRNTGQAAQQQILELTGVKSCGTFEKYLGLP 343

[Close]

BLAST of Lag0005845 vs. NCBI nr
Match: KAF5470770.1 (hypothetical protein F2P56_011261 [Juglans regia])

HSP 1 Score: 160.2 bits (404), Expect = 1.8e-35
Identity = 93/232 (40.09%), Postives = 125/232 (53.88%), Query Frame = 0


Query: 1   MFPTKVPGLDGFPALFYQHYWNTVGDKTNINCLKILNEGGSIEEWNETNIVLIPKVNNPK 60
           M P   PG DGFPA FYQ +W  VG++     LK+LN+GGS++E N+T I LIPKV NPK
Sbjct: 112 MNPLGSPGPDGFPAQFYQKHWEVVGEQVCNFALKVLNQGGSLKEVNDTFITLIPKVKNPK 171

Query: 61  MVGDFRPISLCHVNYKIVTKTITNRLKG------------------------------DT 120
            V DFRPISLC+V YKIV+KTI NRLK                                +
Sbjct: 172 RVTDFRPISLCNVVYKIVSKTIANRLKVILPKLISLNQSAFVPGRLISDNTLVAYEILHS 231

Query: 121 NNGRL---------SGGSCSQTGP--------SISHLLFADDSLVFCKVDENEINHLKGL 180
            N R+            +C    P        S++HL FADDSL FC+    E+ H+  +
Sbjct: 232 MNSRMKEALTALLNQAEACGVLTPVPIGRSPISVNHLFFADDSLFFCQAKAEELRHVLNI 291

Query: 181 LEVYEKASGENINYNKSAMFFSKSVDRDKRISLSNILGVESVENIGNYLGAP 186
           L++YEKASG+ IN +KS++FFS++  +  +  +  + GV+S      YLG P
Sbjct: 292 LDIYEKASGKVINKDKSSIFFSRNTGQAAQQQILELTGVKSCGTFEKYLGLP 343

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BLAST of Lag0005845 vs. NCBI nr
Match: CAB4274033.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 159.5 bits (402), Expect = 3.0e-35
Identity = 93/226 (41.15%), Postives = 118/226 (52.21%), Query Frame = 0


Query: 1   MFPTKVPGLDGFPALFYQHYWNTVGDKTNINCLKILNEGGSIEEWNETNIVLIPKVNNPK 60
           M+PTK PG+DG PALFYQHYW+ VGD  +  C +ILN  GS+ ++N T I LIPK+  P 
Sbjct: 84  MYPTKAPGIDGMPALFYQHYWHIVGDSVSDAC-RILNGEGSVRDFNHTLIALIPKITQPT 143

Query: 61  MVGDFRPISLCHVNYKIVTKTITNRLK--------------------------------- 120
            V DFRPISLC V YK+V K+  NRLK                                 
Sbjct: 144 RVTDFRPISLCTVLYKMVVKSFANRLKMILPESLSRCYGKEILLDILSRIEALDKDALYP 203

Query: 121 -GDT-------NNGRLSGGSCSQTGPSISHLLFADDSLVFCKVDENEINHLKGLLEVYEK 180
            G T         GR+ GG  +   P +SHL FADDSL+F +        +KG+   Y+K
Sbjct: 204 QGFTGLIQQAKQLGRIRGGKVAAEAPVVSHLFFADDSLIFLEAKREVFEEVKGIFATYKK 263

Query: 181 ASGENINYNKSAMFFSKSVDRDKRISLSNILGVESVENIGNYLGAP 186
           ASG+ IN +KSA+ FS +V  +   +  NIL V  V     YLG P
Sbjct: 264 ASGQKINLDKSAVSFSSNVTAEIINAARNILQVPVVACHERYLGLP 308

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BLAST of Lag0005845 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-07
Identity = 28/83 (33.73%), Postives = 46/83 (55.42%), Query Frame = 0


Query: 5   KVPGLDGFPALFYQHYWNTVGDKTNINCLKILNEGGSIEEWNETNIVLIPKVNNPKMVGD 64
           K PGLDG    F+Q +W+T+G   +    +   +G          + L+PK  + +++ +
Sbjct: 465 KSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVLSLLPKKGDLRLIKN 524

Query: 65  FRPISLCHVNYKIVTKTITNRLK 88
           +RP+SL   +YKIV K I+ RLK
Sbjct: 525 WRPVSLLSTDYKIVAKAISLRLK 547

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BLAST of Lag0005845 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 4.0e-06
Identity = 32/84 (38.10%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 5   KVPGLDGFPALFYQHYWNTVGDKTNINCLKILNEGGSIEEWNETNIVLIPK-VNNPKMVG 64
           K PG DGF A FYQ +   +    +    KI  EG     + E  I LIPK   +P  + 
Sbjct: 476 KSPGPDGFSAEFYQTFKEDLIPILHKLFHKIEVEGTLPNSFYEATITLIPKPQKDPTKIE 535

Query: 65  DFRPISLCHVNYKIVTKTITNRLK 88
           +FRPISL +++ KI+ K + NR++
Sbjct: 536 NFRPISLMNIDAKILNKILANRIQ 559

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BLAST of Lag0005845 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.6e-05
Identity = 31/84 (36.90%), Postives = 45/84 (53.57%), Query Frame = 0


Query: 5   KVPGLDGFPALFYQHYWNTVGDKTNINCLKILNEGGSIEEWNETNIVLIPKV-NNPKMVG 64
           K PG DGF + FYQ +   +          I  EG     + E NI LIPK   +P    
Sbjct: 468 KSPGPDGFTSEFYQTFKEELVPILLNLFQNIEKEGILPNTFYEANITLIPKPGKDPTRKE 527

Query: 65  DFRPISLCHVNYKIVTKTITNRLK 88
           ++RPISL +++ KI+ K +TNR++
Sbjct: 528 NYRPISLMNIDAKILNKILTNRIQ 551

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BLAST of Lag0005845 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.4e-05
Identity = 31/84 (36.90%), Postives = 44/84 (52.38%), Query Frame = 0


Query: 5   KVPGLDGFPALFYQHYWNTVGDKTNINCLKILNEGGSIEEWNETNIVLIPKV-NNPKMVG 64
           K PG DGF A FYQ Y   +          I  EG     + E +I+LIPK   +     
Sbjct: 469 KSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKE 528

Query: 65  DFRPISLCHVNYKIVTKTITNRLK 88
           +FRPISL +++ KI+ K + NR++
Sbjct: 529 NFRPISLMNIDAKILNKILANRIQ 552

[Close]

BLAST of Lag0005845 vs. ExPASy TrEMBL
Match: A0A6P9E5W8 (uncharacterized protein LOC108982175 OS=Juglans regia OX=51240 GN=LOC108982175 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 7.8e-37
Identity = 94/232 (40.52%), Postives = 126/232 (54.31%), Query Frame = 0


Query: 1   MFPTKVPGLDGFPALFYQHYWNTVGDKTNINCLKILNEGGSIEEWNETNIVLIPKVNNPK 60
           M P   PG DGFPA FYQ +W  VG+K     LK+LN+GGS++E N+T I LIPKV NPK
Sbjct: 406 MNPLGSPGPDGFPAQFYQKHWEVVGEKVCNFALKVLNQGGSLKEVNDTFITLIPKVKNPK 465

Query: 61  MVGDFRPISLCHVNYKIVTKTITNRLKG------------------------------DT 120
            V DFRPISLC+V YKIV+KTI NRLK                                +
Sbjct: 466 RVTDFRPISLCNVIYKIVSKTIANRLKVILPKLISLNQSAFVPGRLISDNTLVAYEILHS 525

Query: 121 NNGRL---------SGGSCSQTGP--------SISHLLFADDSLVFCKVDENEINHLKGL 180
            N R+            +C    P        S++HL FADDSL+FC+    E+ H+  +
Sbjct: 526 MNSRMKEALTALLNQADACGVLTPVPIGRSPISVNHLFFADDSLLFCQAKAEELRHVLNI 585

Query: 181 LEVYEKASGENINYNKSAMFFSKSVDRDKRISLSNILGVESVENIGNYLGAP 186
           L++YEKASG+ IN +KS++FFS++  +  +  +  + GV+S      YLG P
Sbjct: 586 LDIYEKASGQVINKDKSSIFFSRNTGQAAQQQILELTGVKSCGTFDKYLGLP 637

[Close]

BLAST of Lag0005845 vs. ExPASy TrEMBL
Match: A0A2N9F204 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS9035 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.3e-36
Identity = 92/236 (38.98%), Postives = 125/236 (52.97%), Query Frame = 0


Query: 1   MFPTKVPGLDGFPALFYQHYWNTVGDKTNINCLKILNEGGSIEEWNETNIVLIPKVNNPK 60
           M P K PG DG P LF+Q YW+ +GD+     L  LN G  ++  N T I LIPK+ NP+
Sbjct: 734 MAPLKAPGPDGLPPLFFQKYWHLIGDEVTEAVLTCLNTGKILKAINHTYITLIPKIQNPE 793

Query: 61  MVGDFRPISLCHVNYKIVTKTITNRLK--------------------------------- 120
           +V DFRPISLC+V YKI++K + NRLK                                 
Sbjct: 794 VVVDFRPISLCNVIYKIISKVLANRLKILLPKIVSESQSAFVPGRLITDNILVAFETLHH 853

Query: 121 -GDTNNGR------------LSGGSCSQTGPSISHLLFADDSLVFCKVDENEINHLKGLL 180
                 GR            L G S S+ GP I+HL FADDSL+FCK    ++  ++G+L
Sbjct: 854 MQHQKKGRIDSMALKLDMSALKGVSISRGGPKITHLFFADDSLLFCKATTADVERIQGIL 913

Query: 181 EVYEKASGENINYNKSAMFFSKSVDRDKRISLSNILGVESVENIGNYLGAPQSFQG 191
             YE+ASG+ IN  K+ +FFSKS  +  + ++ N+LGV +++    YLG P SF G
Sbjct: 914 SQYERASGQQINRQKTTIFFSKSTPQSAQAAVQNMLGVPAIKQYERYLGLP-SFIG 968

[Close]

BLAST of Lag0005845 vs. ExPASy TrEMBL
Match: A0A6J5UD10 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS22347 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.5e-35
Identity = 93/226 (41.15%), Postives = 118/226 (52.21%), Query Frame = 0


Query: 1   MFPTKVPGLDGFPALFYQHYWNTVGDKTNINCLKILNEGGSIEEWNETNIVLIPKVNNPK 60
           M+PTK PG+DG PALFYQHYW+ VGD  +  C +ILN  GS+ ++N T I LIPK+  P 
Sbjct: 84  MYPTKAPGIDGMPALFYQHYWHIVGDSVSDAC-RILNGEGSVRDFNHTLIALIPKITQPT 143

Query: 61  MVGDFRPISLCHVNYKIVTKTITNRLK--------------------------------- 120
            V DFRPISLC V YK+V K+  NRLK                                 
Sbjct: 144 RVTDFRPISLCTVLYKMVVKSFANRLKMILPESLSRCYGKEILLDILSRIEALDKDALYP 203

Query: 121 -GDT-------NNGRLSGGSCSQTGPSISHLLFADDSLVFCKVDENEINHLKGLLEVYEK 180
            G T         GR+ GG  +   P +SHL FADDSL+F +        +KG+   Y+K
Sbjct: 204 QGFTGLIQQAKQLGRIRGGKVAAEAPVVSHLFFADDSLIFLEAKREVFEEVKGIFATYKK 263

Query: 181 ASGENINYNKSAMFFSKSVDRDKRISLSNILGVESVENIGNYLGAP 186
           ASG+ IN +KSA+ FS +V  +   +  NIL V  V     YLG P
Sbjct: 264 ASGQKINLDKSAVSFSSNVTAEIINAARNILQVPVVACHERYLGLP 308

[Close]

BLAST of Lag0005845 vs. ExPASy TrEMBL
Match: A0A6J5WW09 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS22096 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 2.5e-35
Identity = 93/226 (41.15%), Postives = 118/226 (52.21%), Query Frame = 0


Query: 1   MFPTKVPGLDGFPALFYQHYWNTVGDKTNINCLKILNEGGSIEEWNETNIVLIPKVNNPK 60
           M+PTK PG+DG PALFYQHYW+ VGD  +  C +ILN  GS+ ++N T I LIPK+  P 
Sbjct: 36  MYPTKAPGIDGMPALFYQHYWHIVGDSVSDAC-RILNGEGSVRDFNHTLIALIPKITQPT 95

Query: 61  MVGDFRPISLCHVNYKIVTKTITNRLK--------------------------------- 120
            V DFRPISLC V YK+V K+  NRLK                                 
Sbjct: 96  RVTDFRPISLCTVLYKMVAKSFANRLKMILPESLSRCYGKEILLDILSRIEALDKDALYP 155

Query: 121 -GDT-------NNGRLSGGSCSQTGPSISHLLFADDSLVFCKVDENEINHLKGLLEVYEK 180
            G T         GR+ GG  +   P +SHL FADDSL+F +        +KG+   Y+K
Sbjct: 156 QGFTGLIQQAKQLGRIRGGKVAAEAPVVSHLFFADDSLIFLEAKREVFEEVKGIFATYKK 215

Query: 181 ASGENINYNKSAMFFSKSVDRDKRISLSNILGVESVENIGNYLGAP 186
           ASG+ IN +KSA+ FS +V  +   +  NIL V  V     YLG P
Sbjct: 216 ASGQKINLDKSAVSFSSNVTVEIINAARNILQVPVVACHERYLGLP 260

[Close]

BLAST of Lag0005845 vs. ExPASy TrEMBL
Match: A0A2N9H1N4 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33433 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 2.5e-35
Identity = 86/233 (36.91%), Postives = 124/233 (53.22%), Query Frame = 0


Query: 1    MFPTKVPGLDGFPALFYQHYWNTVGDKTNINCLKILNEGGSIEEWNETNIVLIPKVNNPK 60
            M P K PG DG P +FYQ YW+ +G       L  LN G  ++  N T + LIPKV NP+
Sbjct: 859  MAPIKAPGPDGLPPIFYQKYWHLIGKDVTTAVLTCLNSGKILKAINHTYLTLIPKVQNPE 918

Query: 61   MVGDFRPISLCHVNYKIVTKTITNR----------------------------------- 120
             V +FRPISLC+V YK+++KT+ NR                                   
Sbjct: 919  EVMEFRPISLCNVIYKLISKTLANRTGKTGSMALKLDMCKAYDKVEWKFLKRVMEKMGFQ 978

Query: 121  --------LKGDTNNGRLSGGSCSQTGPSISHLLFADDSLVFCKVDENEINHLKGLLEVY 180
                    ++ +   G L G S S+ GP I+HL  ADDSL+FC+   +++N ++G+L  Y
Sbjct: 979  DKWGLHSLIQKEKMAGSLKGVSISRGGPKITHLFLADDSLLFCRATTDDVNRIQGILSQY 1038

Query: 181  EKASGENINYNKSAMFFSKSVDRDKRISLSNILGVESVENIGNYLGAPQSFQG 191
            EKASG+ IN +K+ +FFSKS     + ++ ++LGV +++    YLG P SF G
Sbjct: 1039 EKASGQQINRHKTTLFFSKSTPLPTQNAIQSMLGVSAIKQYERYLGLP-SFVG 1090

The following BLAST results are available for this feature:

BLAST of Lag0005845 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_024190234.1	3.4e-39	45.64	uncharacterized protein LOC112194221 [Rosa chinensis]	[more]
XP_035539633.1	1.6e-36	40.52	uncharacterized protein LOC108982175 [Juglans regia]	[more]
KAF5470771.1	1.8e-35	40.09	hypothetical protein F2P56_011262, partial [Juglans regia]	[more]
KAF5470770.1	1.8e-35	40.09	hypothetical protein F2P56_011261 [Juglans regia]	[more]
CAB4274033.1	3.0e-35	41.15	unnamed protein product [Prunus armeniaca]	[more]

BLAST of Lag0005845 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14381	1.2e-07	33.73	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV...	[more]
P11369	4.0e-06	38.10	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]
P08548	2.6e-05	36.90	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1	[more]
O00370	4.4e-05	36.90	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1	[more]

BLAST of Lag0005845 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P9E5W8	7.8e-37	40.52	uncharacterized protein LOC108982175 OS=Juglans regia OX=51240 GN=LOC108982175 P...	[more]
A0A2N9F204	1.3e-36	38.98	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS9035 PE=4 SV=1	[more]
A0A6J5UD10	1.5e-35	41.15	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS22347 PE=4 S...	[more]
A0A6J5WW09	2.5e-35	41.15	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS22096 PE=...	[more]
A0A2N9H1N4	2.5e-35	36.91	RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33433 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR19446:SF440	SUBFAMILY NOT NAMED	coord: 1..88
None	No IPR available	PANTHER	PTHR19446	REVERSE TRANSCRIPTASES	coord: 1..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0005845.1	Lag0005845.1	mRNA