Lag0005837 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0005837
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Protein of unknown function (DUF1118)
Location	chr6: 31569517 .. 31570262 (-)
RNA-Seq Expression	Lag0005837
Synteny	Lag0005837

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGACTGCCGGCGACGACGGACGGCTGGCAACCACCGCTCGTCATCTTCCTCTGCTGCCACTGCCATCTTCCTTTCACCTTCCCAACCTCTGTCAGCGACGACGGATGGTGGTCACTTCACCATCTTCCTCCGCTGCCACTGCCGCTGCCGCTCCCTCTCACCTTCCCAACCTCTTCCGACCCAGCTGCTTCTCCACTTCCAGATTTCGCCATGCCCGCCCAATTCCTCCCTCCAGATCGATCATCGCCATGGCCCCTTAGAAGAAGGTACTGCAACTCTTTCCCCTCCATCTTCACTTTCTCTTTCGGGCTAGGGCTAACGAAGTGAAATCGATGGGTTTAGGTGAACAAGTACGATAGCGCTTGGGAGAAGAAGTGGTTCGGAGCCAGAATCTTCTACGAGAGCTCAGAGGATGTGGAGGTGGACGTGTTTAAGAAGGTCGAGACGAAGAAAGTGCTTTGCAATGTCGAGAAAGCAAGACTGCTATCGAAGGCGGAGAAATTAGGGTTTACGCTCTCTTTGATTGAAAAATTGGGGGCTTTCTCTAAGGTCGAGGAATTAGGGCTTCTGAGCTTGCTGGAGAAGGTTACCAGCTCTTCTTCGTCAGCCTTGGCCTTTTTAGCCCTTCCCATTCTCGTGGTCGCGCTTGCGGCGATTGTTCTGATTCCCGACGACTCGGTGACGCTTGTGGCGATGCAGGCAGTGGTCGTGGTGTTGGGTGGGTTGCAGGAAGCTGATTGA

mRNA sequence

ATGGCCGACTGCCGGCGACGACGGACGGCTGGCAACCACCGCTCGTCATCTTCCTCTGCTGCCACTGCCATCTTCCTTTCACCTTCCCAACCTCTGTCAGCGACGACGGATGGTGGTCACTTCACCATCTTCCTCCGCTGCCACTGCCGCTGCCGCTCCCTCTCACCTTCCCAACCTCTTCCGACCCAGCTGCTTCTCCACTTCCAGATTTCGCCATGCCCGCCCAATTCCTCCCTCCAGATCGATCATCGCCATGGCCCCTTAGAAGAAGAGGATGTGGAGGTGGACGTGTTTAAGAAGGTCGAGACGAAGAAAGTGCTTTGCAATGTCGAGAAAGCAAGACTGCTATCGAAGGCGGAGAAATTAGGGTTTACGCTCTCTTTGATTGAAAAATTGGGGGCTTTCTCTAAGGTCGAGGAATTAGGGCTTCTGAGCTTGCTGGAGAAGGTTACCAGCTCTTCTTCGTCAGCCTTGGCCTTTTTAGCCCTTCCCATTCTCGTGGTCGCGCTTGCGGCGATTGTTCTGATTCCCGACGACTCGGTGACGCTTGTGGCGATGCAGGCAGTGGTCGTGGTGTTGGGTGGGTTGCAGGAAGCTGATTGA

Coding sequence (CDS)

ATGGCCGACTGCCGGCGACGACGGACGGCTGGCAACCACCGCTCGTCATCTTCCTCTGCTGCCACTGCCATCTTCCTTTCACCTTCCCAACCTCTGTCAGCGACGACGGATGGTGGTCACTTCACCATCTTCCTCCGCTGCCACTGCCGCTGCCGCTCCCTCTCACCTTCCCAACCTCTTCCGACCCAGCTGCTTCTCCACTTCCAGATTTCGCCATGCCCGCCCAATTCCTCCCTCCAGATCGATCATCGCCATGGCCCCTTAGAAGAAGAGGATGTGGAGGTGGACGTGTTTAAGAAGGTCGAGACGAAGAAAGTGCTTTGCAATGTCGAGAAAGCAAGACTGCTATCGAAGGCGGAGAAATTAGGGTTTACGCTCTCTTTGATTGAAAAATTGGGGGCTTTCTCTAAGGTCGAGGAATTAGGGCTTCTGAGCTTGCTGGAGAAGGTTACCAGCTCTTCTTCGTCAGCCTTGGCCTTTTTAGCCCTTCCCATTCTCGTGGTCGCGCTTGCGGCGATTGTTCTGATTCCCGACGACTCGGTGACGCTTGTGGCGATGCAGGCAGTGGTCGTGGTGTTGGGTGGGTTGCAGGAAGCTGATTGA

Protein sequence

MADCRRRRTAGNHRSSSSSAATAIFLSPSQPLSATTDGGHFTIFLRCHCRCRSLSPSQPLPTQLLLHFQISPCPPNSSLQIDHRHGPLEEEDVEVDVFKKVETKKVLCNVEKARLLSKAEKLGFTLSLIEKLGAFSKVEELGLLSLLEKVTSSSSSALAFLALPILVVALAAIVLIPDDSVTLVAMQAVVVVLGGLQEAD

Homology

[Close]

BLAST of Lag0005837 vs. NCBI nr
Match: XP_022137512.1 (uncharacterized protein LOC111008941 [Momordica charantia])

HSP 1 Score: 147.9 bits (372), Expect = 9.3e-32
Identity = 96/125 (76.80%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 91  EDVEVDVFKKVETKKVLCNVEKARLLSKAEKLGFTLSLIEKLGAFSKVEELGLLSLLEKV 150
           EDVEVDVFKK+ETKKVL NVEKA LLSKAE+LGFTLS IEKLG FSK EELGLLSLLEKV
Sbjct: 79  EDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKV 138

Query: 151 TSSSSSALAFLALPILVVALAAIVLIPDDSVTLVAMQAVV---------------VVLGG 201
            SSS SALA LALPILV ALAAIVLIPDDS  LVA+QAVV               VVLGG
Sbjct: 139 ASSSPSALASLALPILVAALAAIVLIPDDSAALVALQAVVGGGLALGAAGLLVGSVVLGG 198

[Close]

BLAST of Lag0005837 vs. NCBI nr
Match: XP_038895665.1 (uncharacterized protein LOC120083851 [Benincasa hispida])

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-31
Identity = 95/125 (76.00%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 91  EDVEVDVFKKVETKKVLCNVEKARLLSKAEKLGFTLSLIEKLGAFSKVEELGLLSLLEKV 150
           EDVEVDVFKK+ETKKVL NVEKA LLSKAE+LGFTLS IEKLG FSK EELGLLSLLEK+
Sbjct: 80  EDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKI 139

Query: 151 TSSSSSALAFLALPILVVALAAIVLIPDDSVTLVAMQAVV---------------VVLGG 201
            SSS SALA LALPILV ALAAIVLIPDDSV LV +QAVV               VVLGG
Sbjct: 140 VSSSPSALASLALPILVTALAAIVLIPDDSVALVVLQAVVGGGLALGAAGLLVGSVVLGG 199

[Close]

BLAST of Lag0005837 vs. NCBI nr
Match: XP_004152441.1 (uncharacterized protein LOC101214681 [Cucumis sativus] >KGN64256.1 hypothetical protein Csa_013525 [Cucumis sativus])

HSP 1 Score: 146.7 bits (369), Expect = 2.1e-31
Identity = 95/125 (76.00%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 91  EDVEVDVFKKVETKKVLCNVEKARLLSKAEKLGFTLSLIEKLGAFSKVEELGLLSLLEKV 150
           EDVEVDVFKK+ETKKVL NVEKA LLSKAE+LGFTLS IEKLG FSK EELGLLSLLEKV
Sbjct: 80  EDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKV 139

Query: 151 TSSSSSALAFLALPILVVALAAIVLIPDDSVTLVAMQAVV---------------VVLGG 201
            SSS SALA LALPILV AL AIV+IPDDSV LVA+QAVV               VVLGG
Sbjct: 140 ASSSPSALASLALPILVAALVAIVVIPDDSVALVALQAVVGGGLALGAAGLLVGSVVLGG 199

[Close]

BLAST of Lag0005837 vs. NCBI nr
Match: XP_008437595.1 (PREDICTED: uncharacterized protein LOC103482961 [Cucumis melo] >TYJ99105.1 DUF1118 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-30
Identity = 94/125 (75.20%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 91  EDVEVDVFKKVETKKVLCNVEKARLLSKAEKLGFTLSLIEKLGAFSKVEELGLLSLLEKV 150
           EDVEVDVFKK+ETKKVL NVEKA LLSKAE+LG TLS IEKLG FSK EELGLLSLLEKV
Sbjct: 80  EDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGVTLSSIEKLGVFSKAEELGLLSLLEKV 139

Query: 151 TSSSSSALAFLALPILVVALAAIVLIPDDSVTLVAMQAVV---------------VVLGG 201
            SSS SALA LALPILV AL AIV+IPDDSV LVA+QAVV               VVLGG
Sbjct: 140 ASSSPSALASLALPILVAALVAIVVIPDDSVALVALQAVVGGGLALGAAGLLVGSVVLGG 199

[Close]

BLAST of Lag0005837 vs. NCBI nr
Match: XP_023000865.1 (uncharacterized protein LOC111495182 [Cucurbita maxima] >XP_023000866.1 uncharacterized protein LOC111495182 [Cucurbita maxima])

HSP 1 Score: 143.3 bits (360), Expect = 2.3e-30
Identity = 93/125 (74.40%), Postives = 97/125 (77.60%), Query Frame = 0


Query: 91  EDVEVDVFKKVETKKVLCNVEKARLLSKAEKLGFTLSLIEKLGAFSKVEELGLLSLLEKV 150
           EDVEVDVFKK+ETKKVL NVEKA LLSKAE+LGFTLS IEKLG FSK EE GLLSLLEKV
Sbjct: 77  EDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEEFGLLSLLEKV 136

Query: 151 TSSSSSALAFLALPILVVALAAIVLIPDDSVTLVAMQAVV---------------VVLGG 201
            S+S S LA LALPILV ALAAIVLIPDDS  LVA+QAVV               VVLGG
Sbjct: 137 ASASPSTLASLALPILVAALAAIVLIPDDSAPLVALQAVVAGGLTLGAAGLFVGSVVLGG 196

[Close]

BLAST of Lag0005837 vs. ExPASy TrEMBL
Match: A0A6J1C8G3 (uncharacterized protein LOC111008941 OS=Momordica charantia OX=3673 GN=LOC111008941 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 4.5e-32
Identity = 96/125 (76.80%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 91  EDVEVDVFKKVETKKVLCNVEKARLLSKAEKLGFTLSLIEKLGAFSKVEELGLLSLLEKV 150
           EDVEVDVFKK+ETKKVL NVEKA LLSKAE+LGFTLS IEKLG FSK EELGLLSLLEKV
Sbjct: 79  EDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKV 138

Query: 151 TSSSSSALAFLALPILVVALAAIVLIPDDSVTLVAMQAVV---------------VVLGG 201
            SSS SALA LALPILV ALAAIVLIPDDS  LVA+QAVV               VVLGG
Sbjct: 139 ASSSPSALASLALPILVAALAAIVLIPDDSAALVALQAVVGGGLALGAAGLLVGSVVLGG 198

[Close]

BLAST of Lag0005837 vs. ExPASy TrEMBL
Match: A0A0A0LW40 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045540 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.0e-31
Identity = 95/125 (76.00%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 91  EDVEVDVFKKVETKKVLCNVEKARLLSKAEKLGFTLSLIEKLGAFSKVEELGLLSLLEKV 150
           EDVEVDVFKK+ETKKVL NVEKA LLSKAE+LGFTLS IEKLG FSK EELGLLSLLEKV
Sbjct: 80  EDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKV 139

Query: 151 TSSSSSALAFLALPILVVALAAIVLIPDDSVTLVAMQAVV---------------VVLGG 201
            SSS SALA LALPILV AL AIV+IPDDSV LVA+QAVV               VVLGG
Sbjct: 140 ASSSPSALASLALPILVAALVAIVVIPDDSVALVALQAVVGGGLALGAAGLLVGSVVLGG 199

[Close]

BLAST of Lag0005837 vs. ExPASy TrEMBL
Match: A0A5D3BL78 (DUF1118 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003100 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 6.5e-31
Identity = 94/125 (75.20%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 91  EDVEVDVFKKVETKKVLCNVEKARLLSKAEKLGFTLSLIEKLGAFSKVEELGLLSLLEKV 150
           EDVEVDVFKK+ETKKVL NVEKA LLSKAE+LG TLS IEKLG FSK EELGLLSLLEKV
Sbjct: 80  EDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGVTLSSIEKLGVFSKAEELGLLSLLEKV 139

Query: 151 TSSSSSALAFLALPILVVALAAIVLIPDDSVTLVAMQAVV---------------VVLGG 201
            SSS SALA LALPILV AL AIV+IPDDSV LVA+QAVV               VVLGG
Sbjct: 140 ASSSPSALASLALPILVAALVAIVVIPDDSVALVALQAVVGGGLALGAAGLLVGSVVLGG 199

[Close]

BLAST of Lag0005837 vs. ExPASy TrEMBL
Match: A0A1S3AV09 (uncharacterized protein LOC103482961 OS=Cucumis melo OX=3656 GN=LOC103482961 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 6.5e-31
Identity = 94/125 (75.20%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 91  EDVEVDVFKKVETKKVLCNVEKARLLSKAEKLGFTLSLIEKLGAFSKVEELGLLSLLEKV 150
           EDVEVDVFKK+ETKKVL NVEKA LLSKAE+LG TLS IEKLG FSK EELGLLSLLEKV
Sbjct: 80  EDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGVTLSSIEKLGVFSKAEELGLLSLLEKV 139

Query: 151 TSSSSSALAFLALPILVVALAAIVLIPDDSVTLVAMQAVV---------------VVLGG 201
            SSS SALA LALPILV AL AIV+IPDDSV LVA+QAVV               VVLGG
Sbjct: 140 ASSSPSALASLALPILVAALVAIVVIPDDSVALVALQAVVGGGLALGAAGLLVGSVVLGG 199

[Close]

BLAST of Lag0005837 vs. ExPASy TrEMBL
Match: A0A6J1KJH4 (uncharacterized protein LOC111495182 OS=Cucurbita maxima OX=3661 GN=LOC111495182 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.1e-30
Identity = 93/125 (74.40%), Postives = 97/125 (77.60%), Query Frame = 0


Query: 91  EDVEVDVFKKVETKKVLCNVEKARLLSKAEKLGFTLSLIEKLGAFSKVEELGLLSLLEKV 150
           EDVEVDVFKK+ETKKVL NVEKA LLSKAE+LGFTLS IEKLG FSK EE GLLSLLEKV
Sbjct: 77  EDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEEFGLLSLLEKV 136

Query: 151 TSSSSSALAFLALPILVVALAAIVLIPDDSVTLVAMQAVV---------------VVLGG 201
            S+S S LA LALPILV ALAAIVLIPDDS  LVA+QAVV               VVLGG
Sbjct: 137 ASASPSTLASLALPILVAALAAIVLIPDDSAPLVALQAVVAGGLTLGAAGLFVGSVVLGG 196

[Close]

BLAST of Lag0005837 vs. TAIR 10
Match: AT1G74730.1 (Protein of unknown function (DUF1118) )

HSP 1 Score: 109.0 bits (271), Expect = 4.5e-24
Identity = 72/125 (57.60%), Postives = 84/125 (67.20%), Query Frame = 0


Query: 91  EDVEVDVFKKVETKKVLCNVEKARLLSKAEKLGFTLSLIEKLGAFSKVEELGLLSLLEKV 150
           E + VDVFKK+E +KVL NVEK+ LLSKAE LG TLS +EKL  FSK E+LGLLSLLE +
Sbjct: 74  EQINVDVFKKLEKRKVLSNVEKSGLLSKAEGLGLTLSSLEKLKVFSKAEDLGLLSLLENL 133

Query: 151 TSSSSSALAFLALPILVVALAAIVLIPDDSVTLVAMQAVV---------------VVLGG 201
             +S + LA  ALP L  A+ A+VLIPDDS TLV  QAV+               VVL G
Sbjct: 134 AGTSPAVLASAALPALTAAIVAVVLIPDDSTTLVVAQAVLAGALALTGVVLLVGSVVLDG 193

[Close]

BLAST of Lag0005837 vs. TAIR 10
Match: AT5G08050.1 (Protein of unknown function (DUF1118) )

HSP 1 Score: 48.9 bits (115), Expect = 5.5e-06
Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 94  EVDVFKKVETKKVLCNVEKARLLSKAEKLGFTLSLIEKLGAFSKVEELGLLSLLEKVTSS 153
           +V +  +VE  K+L   EKA LLS AEK GF+LS IE+LG  +K EE G+LS        
Sbjct: 39  QVKLLTRVEQLKLLTKAEKAGLLSLAEKSGFSLSTIERLGLLTKAEEFGVLS--AATNPE 98

Query: 154 SSSALAFLALPILVVALAAIVLIPDDSVTLVAMQAVVVVLGGL 197
           +   L  L+L +L++      ++P+D    V +Q +V +L  L
Sbjct: 99  TPGTLFTLSLGLLLLGPVFAYVVPEDYTWEVVIQVLVALLSVL 139

The following BLAST results are available for this feature:

BLAST of Lag0005837 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137512.1	9.3e-32	76.80	uncharacterized protein LOC111008941 [Momordica charantia]	[more]
XP_038895665.1	1.2e-31	76.00	uncharacterized protein LOC120083851 [Benincasa hispida]	[more]
XP_004152441.1	2.1e-31	76.00	uncharacterized protein LOC101214681 [Cucumis sativus] >KGN64256.1 hypothetical ...	[more]
XP_008437595.1	1.3e-30	75.20	PREDICTED: uncharacterized protein LOC103482961 [Cucumis melo] >TYJ99105.1 DUF11...	[more]
XP_023000865.1	2.3e-30	74.40	uncharacterized protein LOC111495182 [Cucurbita maxima] >XP_023000866.1 uncharac...	[more]

BLAST of Lag0005837 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0005837 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C8G3	4.5e-32	76.80	uncharacterized protein LOC111008941 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A0A0LW40	1.0e-31	76.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045540 PE=4 SV=1	[more]
A0A5D3BL78	6.5e-31	75.20	DUF1118 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3AV09	6.5e-31	75.20	uncharacterized protein LOC103482961 OS=Cucumis melo OX=3656 GN=LOC103482961 PE=...	[more]
A0A6J1KJH4	1.1e-30	74.40	uncharacterized protein LOC111495182 OS=Cucurbita maxima OX=3661 GN=LOC111495182...	[more]

BLAST of Lag0005837 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74730.1	4.5e-24	57.60	Protein of unknown function (DUF1118)	[more]
AT5G08050.1	5.5e-06	37.86	Protein of unknown function (DUF1118)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009500	Protein of unknown function DUF1118	PFAM	PF06549	DUF1118	coord: 100..192 e-value: 1.9E-31 score: 108.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0005837.1	Lag0005837.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
cellular_component	GO:0110165	cellular anatomical entity