Lag0005789 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0005789
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrotransposon gag protein
Locationchr6: 30258881 .. 30261441 (+)
RNA-Seq ExpressionLag0005789
SyntenyLag0005789
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAATAAATCCTTCTCCAAAAATTTCCACAAAAAGGAAAAAGAGAACTTTGCGACTTCCTACTACATCGACGTAGAAGAAGTTGACAATTATGAGAAGGGTGAACAAAGGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGCATTCCAAAGAATGAGTATGGTCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAACTGGACCTTCAACATCTGTTTTTGATTGCCTCAAAGTAACAAGCGGTCAATCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTTGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATAAATACAGAAAGTTCCTTGAAGGTGAAACCAAATCTCATTAGCTTGACTAGTCCTATAAGTCAAGGACCTGATCAAGACCATGATGAAGATAAGAGCTTTTAAAATGTAAAAACTCCTTATCGCAAGAGCCTAAAAAGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGTGCAAAAAAATTTTGAACTACGTTATGACTTGATCCCTTTTCTTCAAAGGGTACGTAGGCAGCTTAAAAAAACTTCAAGTTCAGTCTCTGCAAACAAAAAAAAAAAGTGCAACAAACATTGAAACACGACAATACAAATTGAAGAAGTTAATCACTACTGGGGGCAACACAACAAATTGAAGTTGTGCACCGTTATGAATATGAAGCTACGAGTTGGATGAATAAAAGAAGATTTCATTCCTCCAAATTCAATGCAGCCTCAAGTTCGGTGATTCACTCACCCTAAGTGCGTGCATTCCTTCTCTTCAAGTTCAGTTCCTTTACTCCAAGTACGAAGGTGCTCCTTCTGCAAGTTCGAAGACTCTTACATTGCTGCGATGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCATGCGTTTCGCAAGTTCGAAGACTCTTACATTGCTGCGATGCAGTTCCTTCTCTCCAAGTTCAAACGTTCTCACGTGTTGTTTGAAGGTTTTCACGCCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAATGTTCTCACGCACTTCGCTGCAGTTCCTTCTTCCTCCAAGTTTGAAGGTTCTCACATCACTTCGTTGCAGTTCCTTCCTCCAAGTTCAAGTTCGAAGGTTTCTCACGCGCTACGCGCTTCGCTGCTGCAGTTCGAAGGTGCTCCTTCTGCAAGTTCGAAGGCTCTTACATTGCTGCGATGCAGTTCCCTTCTCTCCAAGTTCAAAGGTTCTCACGCCACTTTGTTGCAGTTCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCCCTGCTGCAGTTCCTTCTTCCTCCAAGTTCGAAGGTTCTCACGCCACTTCGTTGCAGTTCTTTCTTCCTCCAAGTTCGAAGGTTCTCACGCCACTTCGTTGCAGTTCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCCCTGCTGCAGTTCCTTCCTCCAAGTTCAAGTTCGAAGGTTTCTCACGTGCTACGCTGCTGCAGTTCCTTCCCTCCAAGTTCAAGTTCGAAGGTTCTCGCTGTTGCAGTTTCTCCCCAAGTCTGAAAGGTTTCTTCTGCGCTTCAAAGGATCTCATGGGAAGTATGTATCTTAAAATTTAAGATTAACAATTTACACCCAGTCAACCGAACCAACCAAGCTACGAAACTAATCGGTCCCTTGGTCCGCATTTATTGCGGTTTGGTCCCCTTTATGGGGTGGTGTTTCTCCCCTCATTATGATATAATTCAGTAATGAGTGGAGTGACCCTTGAAGCTTATATGTTGTGAGGTCTCCACCATTCTTTCCGATGTGGGATCCTCAACATGCCCCCTCAAGATGGTGCCTCTATGGGTTCACCATTCTTGGATCGGATCCCAATTTCTTTTTATTGGACCGAATACCCGTTTGGGTTTAATGGGCTCTGATACCATATTATATTATATGGGCTTCCATCTCAAAACCAAAGTGGACAATATCATACCATTGTGCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCCCTGCTGCAGTTCCTTCCTCCAAGTTCAAGTTCGAAGGTTTCTCACGCGCTACGCTGCTGCAGTTCCTTCCCTTCCAAGTTCGAAGGTTCTCACGTGCTTCCCTACTGCAGTTCCTTCCTCCAAGTTCAAGTTCGAAGGTTCTCACGTGCTTCCCTGCTGCAGTTCCTTCCTCCAAGTTCAAGTTCGAAGGTTTCTCACGCGCTACGCTGCTGCAGTTCCTTCCCTCCAAGTTCAAGTTCGAAGGTTCTCGCTGTTGCAGTTTCTCCCCAAGTCTGAAAGGTTTCTTTTGCGCTTCAAAGGATCTCATGGGAAGTATGTATCTTAA

mRNA sequence

ATGTTGAATAAATCCTTCTCCAAAAATTTCCACAAAAAGGAAAAAGAGAACTTTGCGACTTCCTACTACATCGACGTAGAAGAAGTTGACAATTATGAGAAGGGTGAACAAAGGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGCATTCCAAAGAATGAGTATGGTCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAACTGGACCTTCAACATCTGTTTTTGATTGCCTCAAAGTAACAAGCGGTCAATCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTTGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCCCGTCACTTCCTTTACTCCAAGTACGAAGGTGCTCCTTCTGCAAGTTCGAAGACTCTTACATTGCTGCGATGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCATGCGTTTCGCAAGTTCGAAGACTCTTACATTGCTGCGATGCAGTTCCTTCTCTCCAAGTTCAAACGTTCTCACGTGTTGTTTGAAGGTTTTCACGCCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAATGTTCTCACGCACTTCGCTGCAGTTCCTTCTTCCTCCAAGTTTGAAGGTTCTCACATCACTTCGTTGCAGTTCCTTCCTCCAAGTTCAAGTTCGAAGGTTTCTCACGCGCTACGCGCTTCGCTGCTGCAGTTCGAAGGTGCTCCTTCTGCAAGTTCGAAGGCTCTTACATTGCTGCGATGCAGTTCCCTTCTCTCCAAGTTCAAAGGTTCTCACGCCACTTTGTTGCAGTTCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCCCTGCTGCAGTTCCTTCTTCCTCCAAGTTCGAAGGTTCTCACGCCACTTCGTTGCAGTTCTTTCTTCCTCCAAGTTCGAAGGTTCTCACGCCACTTCGTTGCAGTTCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCCCTGCTGCAGTTCCTTCCTCCAAGTTCAAGTTCGAAGGTTTCTCACGTGCTACGCTGCTGCAGTTCCTTCCCTCCAAGTTCAAGTTCGAAGGTTCTCGCTGTTGCAGTTTCTCCCCAAGTCTGAAAGGTTTCTTCTGCGCTTCAAAGGATCTCATGGGAAGTTCTCACGTGCTTCCCTGCTGCAGTTCCTTCCTCCAAGTTCAAGTTCGAAGGTTTCTCACGCGCTACGCTGCTGCAGTTCCTTCCCTTCCAAGTTCGAAGGTTCTCACGTGCTTCCCTACTGCAGTTCCTTCCTCCAAGTTCAAGTTCGAAGGTTCTCACGTGCTTCCCTGCTGCAGTTCCTTCCTCCAAGTTCAAGTTCGAAGGTTTCTCACGCGCTACGCTGCTGCAGTTCCTTCCCTCCAAGTTCAAGTTCGAAGGTTCTCGCTGTTGCAGTTTCTCCCCAAGTCTGAAAGGTTTCTTTTGCGCTTCAAAGGATCTCATGGGAAGTATGTATCTTAA

Coding sequence (CDS)

ATGTTGAATAAATCCTTCTCCAAAAATTTCCACAAAAAGGAAAAAGAGAACTTTGCGACTTCCTACTACATCGACGTAGAAGAAGTTGACAATTATGAGAAGGGTGAACAAAGGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGCATTCCAAAGAATGAGTATGGTCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAACTGGACCTTCAACATCTGTTTTTGATTGCCTCAAAGTAACAAGCGGTCAATCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTTGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCCCGTCACTTCCTTTACTCCAAGTACGAAGGTGCTCCTTCTGCAAGTTCGAAGACTCTTACATTGCTGCGATGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCATGCGTTTCGCAAGTTCGAAGACTCTTACATTGCTGCGATGCAGTTCCTTCTCTCCAAGTTCAAACGTTCTCACGTGTTGTTTGAAGGTTTTCACGCCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAATGTTCTCACGCACTTCGCTGCAGTTCCTTCTTCCTCCAAGTTTGAAGGTTCTCACATCACTTCGTTGCAGTTCCTTCCTCCAAGTTCAAGTTCGAAGGTTTCTCACGCGCTACGCGCTTCGCTGCTGCAGTTCGAAGGTGCTCCTTCTGCAAGTTCGAAGGCTCTTACATTGCTGCGATGCAGTTCCCTTCTCTCCAAGTTCAAAGGTTCTCACGCCACTTTGTTGCAGTTCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCCCTGCTGCAGTTCCTTCTTCCTCCAAGTTCGAAGGTTCTCACGCCACTTCGTTGCAGTTCTTTCTTCCTCCAAGTTCGAAGGTTCTCACGCCACTTCGTTGCAGTTCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCCCTGCTGCAGTTCCTTCCTCCAAGTTCAAGTTCGAAGGTTTCTCACGTGCTACGCTGCTGCAGTTCCTTCCCTCCAAGTTCAAGTTCGAAGGTTCTCGCTGTTGCAGTTTCTCCCCAAGTCTGAAAGGTTTCTTCTGCGCTTCAAAGGATCTCATGGGAAGTTCTCACGTGCTTCCCTGCTGCAGTTCCTTCCTCCAAGTTCAAGTTCGAAGGTTTCTCACGCGCTACGCTGCTGCAGTTCCTTCCCTTCCAAGTTCGAAGGTTCTCACGTGCTTCCCTACTGCAGTTCCTTCCTCCAAGTTCAAGTTCGAAGGTTCTCACGTGCTTCCCTGCTGCAGTTCCTTCCTCCAAGTTCAAGTTCGAAGGTTTCTCACGCGCTACGCTGCTGCAGTTCCTTCCCTCCAAGTTCAAGTTCGAAGGTTCTCGCTGTTGCAGTTTCTCCCCAAGTCTGAAAGGTTTCTTTTGCGCTTCAAAGGATCTCATGGGAAGTATGTATCTTAA

Protein sequence

MLNKSFSKNFHKKEKENFATSYYIDVEEVDNYEKGEQRTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKTGPSTSVFDCLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSLPLLQVRRCSFCKFEDSYIAAMQFLLSKFKGSHAFRKFEDSYIAAMQFLLSKFKRSHVLFEGFHAASLQFLPPSSNVLTHFAAVPSSSKFEGSHITSLQFLPPSSSSKVSHALRASLLQFEGAPSASSKALTLLRCSSLLSKFKGSHATLLQFFLQVRRFSRASLLQFLLPPSSKVLTPLRCSSFFLQVRRFSRHFVAVLPPSSKVLTCFPAAVPSSKFKFEGFSRATLLQFLPSKFKFEGSRCCSFSPSLKGFFCASKDLMGSSHVLPCCSSFLQVQVRRFLTRYAAAVPSLPSSKVLTCFPTAVPSSKFKFEGSHVLPCCSSFLQVQVRRFLTRYAAAVPSLQVQVRRFSLLQFLPKSERFLLRFKGSHGKYVS
Homology
[Close]
BLAST of Lag0005789 vs. NCBI nr
Match: KAA0050736.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYJ95700.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 123.6 bits (309), Expect = 4.8e-24
Identity = 69/113 (61.06%), Postives = 82/113 (72.57%), Query Frame = 0 

Query: 23  YIDVEEVDNYEKGEQRTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQR 82
           Y   EEVDN  + +QRTSVFDRIKP TTR S FQR+SM   EEENQC MST TR SAF+R
Sbjct: 367 YDSYEEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEENQCPMSTYTRTSAFKR 426

Query: 83  LSVSTSKKTGPSTSVFDCLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPS 136
           LS+S SKK  PSTS FD LK+T+ Q +R+M +L+ K F E N D K+ S +PS
Sbjct: 427 LSISRSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIYSRVPS 479

[Close]
BLAST of Lag0005789 vs. NCBI nr
Match: KAA0044978.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-23
Identity = 68/113 (60.18%), Postives = 81/113 (71.68%), Query Frame = 0 

Query: 23  YIDVEEVDNYEKGEQRTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQR 82
           Y   EEVDN  + +QRTSVFDRIKP TTR S FQR+SM   EEENQC  ST  R SAF+R
Sbjct: 116 YDSYEEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEENQCPTSTYARTSAFKR 175

Query: 83  LSVSTSKKTGPSTSVFDCLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPS 136
           LS+STSKK  PSTS FD LK+T+ Q +R+M +L+ K F E N D K+ S +PS
Sbjct: 176 LSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHSRVPS 228

[Close]
BLAST of Lag0005789 vs. NCBI nr
Match: TYK19591.1 (hypothetical protein E5676_scaffold1274G00410 [Cucumis melo var. makuwa])

HSP 1 Score: 120.9 bits (302), Expect = 3.1e-23
Identity = 65/113 (57.52%), Postives = 82/113 (72.57%), Query Frame = 0 

Query: 23  YIDVEEVDNYEKGEQRTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQR 82
           Y   +EVDN  K +QRTSVFDRIKP  TR   FQR+SM   EEENQC MST TR SAF++
Sbjct: 57  YGSSKEVDNSNKNKQRTSVFDRIKPSNTRSLVFQRLSMTMKEEENQCQMSTYTRTSAFKK 116

Query: 83  LSVSTSKKTGPSTSVFDCLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPS 136
           LS+STSKK  PST  F+CLK+T+ Q +R+M +L+VK F E N+D ++ S + S
Sbjct: 117 LSISTSKKDQPSTFAFNCLKMTNNQQQRQMKSLKVKPFHEENNDDEIHSHVSS 169

[Close]
BLAST of Lag0005789 vs. NCBI nr
Match: KAA0025725.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 120.9 bits (302), Expect = 3.1e-23
Identity = 68/113 (60.18%), Postives = 82/113 (72.57%), Query Frame = 0 

Query: 23  YIDVEEVDNYEKGEQRTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQR 82
           Y   EEVDN  + +QRTSVFDRIKP TTR SAFQR+SM   EEENQC  ST  R SAF+R
Sbjct: 116 YDSYEEVDNSNEIKQRTSVFDRIKPLTTRSSAFQRLSMATKEEENQCPTSTYARTSAFKR 175

Query: 83  LSVSTSKKTGPSTSVFDCLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPS 136
           LS+STSKK  PSTS FD LK+T+ Q +R+M +L+ K F E N D K++S + S
Sbjct: 176 LSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIRSRVSS 228

[Close]
BLAST of Lag0005789 vs. NCBI nr
Match: KAA0036008.1 (Retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 120.6 bits (301), Expect = 4.1e-23
Identity = 67/113 (59.29%), Postives = 80/113 (70.80%), Query Frame = 0 

Query: 23  YIDVEEVDNYEKGEQRTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQR 82
           Y   EEVDN  + +QRTSVFDRIKP TTR   FQR+SM   EEENQC MST  R SAF+R
Sbjct: 57  YDSYEEVDNSNEIKQRTSVFDRIKPLTTRSLVFQRLSMATKEEENQCPMSTYARTSAFKR 116

Query: 83  LSVSTSKKTGPSTSVFDCLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPS 136
           LS+STSKK  PSTS FD LK+T+ Q +R+M + + K F E N D K+ S +PS
Sbjct: 117 LSISTSKKHRPSTSAFDRLKMTNDQQQREMKSFKAKPFHEENDDDKIHSRVPS 169

[Close]
BLAST of Lag0005789 vs. ExPASy TrEMBL
Match: A0A5A7U974 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00280 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.3e-24
Identity = 69/113 (61.06%), Postives = 82/113 (72.57%), Query Frame = 0 

Query: 23  YIDVEEVDNYEKGEQRTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQR 82
           Y   EEVDN  + +QRTSVFDRIKP TTR S FQR+SM   EEENQC MST TR SAF+R
Sbjct: 367 YDSYEEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEENQCPMSTYTRTSAFKR 426

Query: 83  LSVSTSKKTGPSTSVFDCLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPS 136
           LS+S SKK  PSTS FD LK+T+ Q +R+M +L+ K F E N D K+ S +PS
Sbjct: 427 LSISRSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIYSRVPS 479

[Close]
BLAST of Lag0005789 vs. ExPASy TrEMBL
Match: A0A5A7TQ06 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002860 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 6.8e-24
Identity = 68/113 (60.18%), Postives = 81/113 (71.68%), Query Frame = 0 

Query: 23  YIDVEEVDNYEKGEQRTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQR 82
           Y   EEVDN  + +QRTSVFDRIKP TTR S FQR+SM   EEENQC  ST  R SAF+R
Sbjct: 116 YDSYEEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEENQCPTSTYARTSAFKR 175

Query: 83  LSVSTSKKTGPSTSVFDCLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPS 136
           LS+STSKK  PSTS FD LK+T+ Q +R+M +L+ K F E N D K+ S +PS
Sbjct: 176 LSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHSRVPS 228

[Close]
BLAST of Lag0005789 vs. ExPASy TrEMBL
Match: A0A5A7SMQ5 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold653G00040 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-23
Identity = 68/113 (60.18%), Postives = 82/113 (72.57%), Query Frame = 0 

Query: 23  YIDVEEVDNYEKGEQRTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQR 82
           Y   EEVDN  + +QRTSVFDRIKP TTR SAFQR+SM   EEENQC  ST  R SAF+R
Sbjct: 116 YDSYEEVDNSNEIKQRTSVFDRIKPLTTRSSAFQRLSMATKEEENQCPTSTYARTSAFKR 175

Query: 83  LSVSTSKKTGPSTSVFDCLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPS 136
           LS+STSKK  PSTS FD LK+T+ Q +R+M +L+ K F E N D K++S + S
Sbjct: 176 LSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIRSRVSS 228

[Close]
BLAST of Lag0005789 vs. ExPASy TrEMBL
Match: A0A5D3D7Q8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1274G00410 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-23
Identity = 65/113 (57.52%), Postives = 82/113 (72.57%), Query Frame = 0 

Query: 23  YIDVEEVDNYEKGEQRTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQR 82
           Y   +EVDN  K +QRTSVFDRIKP  TR   FQR+SM   EEENQC MST TR SAF++
Sbjct: 57  YGSSKEVDNSNKNKQRTSVFDRIKPSNTRSLVFQRLSMTMKEEENQCQMSTYTRTSAFKK 116

Query: 83  LSVSTSKKTGPSTSVFDCLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPS 136
           LS+STSKK  PST  F+CLK+T+ Q +R+M +L+VK F E N+D ++ S + S
Sbjct: 117 LSISTSKKDQPSTFAFNCLKMTNNQQQRQMKSLKVKPFHEENNDDEIHSHVSS 169

[Close]
BLAST of Lag0005789 vs. ExPASy TrEMBL
Match: A0A5D3D209 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003310 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.0e-23
Identity = 67/113 (59.29%), Postives = 79/113 (69.91%), Query Frame = 0 

Query: 23  YIDVEEVDNYEKGEQRTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQR 82
           Y   EEVDN  + +QRTSVFDRIKP TTR   FQR+SM   EEENQC  ST  R SAF+R
Sbjct: 387 YDSYEEVDNSNEIKQRTSVFDRIKPLTTRSLVFQRLSMATKEEENQCPTSTYARTSAFKR 446

Query: 83  LSVSTSKKTGPSTSVFDCLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPS 136
           LS+STSKK  PSTS FD LK+T+ Q KR+M + + K F E N D K+ S +PS
Sbjct: 447 LSISTSKKHRPSTSAFDRLKMTNNQQKREMKSFKAKPFHEQNDDNKIHSRVPS 499

The following BLAST results are available for this feature:
BLAST of Lag0005789 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0050736.14.8e-2461.06retrotransposon gag protein [Cucumis melo var. makuwa] >TYJ95700.1 retrotranspos... [more]
KAA0044978.11.4e-2360.18retrotransposon gag protein [Cucumis melo var. makuwa][more]
TYK19591.13.1e-2357.52hypothetical protein E5676_scaffold1274G00410 [Cucumis melo var. makuwa][more]
KAA0025725.13.1e-2360.18retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0036008.14.1e-2359.29Retrotransposon gag protein [Cucumis melo var. makuwa][more]
BLAST of Lag0005789 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0005789 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U9742.3e-2461.06Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5A7TQ066.8e-2460.18Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5A7SMQ51.5e-2360.18Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5D3D7Q81.5e-2357.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D2092.0e-2359.29Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
BLAST of Lag0005789 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0005789.1Lag0005789.1mRNA