Lag0005752 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0005752
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Protein MNN4-like
Location	chr6: 28234205 .. 28236317 (+)
RNA-Seq Expression	Lag0005752
Synteny	Lag0005752

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTACAAAGAAGCCGAGAGTGGAAAGACAGGTGGAGCTTCATCCAGACACACAATCCCGCCTGATCATCATGAAAAAAGGGGGCTATGATGTGTGAGAAGGCATTTTCCACCAAGACAAGACCTCTCCCAGCTTTCATAGAGGATATCTTGTGCATGTATGGCTGGGACCGACTGAGCAAGGAGTCGAAGGCAGCCTCCATCCCTCTGGTACGTGAGTTTTATGCACAAATTGGAGAGGAGTTGCAGACAGTTGTGCCCTAACAGATCGACTTGTTGAAGGTCGTATCAAATAAATTTATAATCCACAAACACTAAACTACTTGCAGTAGTAGTGGCCAGGGTCGATCATAGGGAGTGGCAGTTGATTATTTATTTCCTATTTATTTTGAGTTGTGAAAACGATAAATGGGGCGATTGGAAGATTGGGTAAATGAACGTGCAAGGAATTTAAAATGCAAGAATTTAACCAAGCAAGAAATTTAAAGGACAAGAAATTAAATTACAAGAAACATAAATAAGCAAAAGAATTAATTAAATTAGGCGACACCGATTCAATTGATAATTGGGGTTGAATGATTTACTCTGATCATTGAATCTCTACCTATTAAAGGTTAGTTTGAATTGCTCGATTGCCCAATCGATCTAATCTGAACCCAGGAGAGACCCAAAGCCCACCTAAGCCATCTAACCTGATCATACAACGTCCATCGAATTAGAAACTAATTGGTTAATCAATTAATCCAATTGGACTATCAAATTAAACAATAAACCAATTGCCTTAAGTCTAGTGGATTGATTAGGATATTAGAAATAATTAGGCCTAGATTACTTCTAACGTTATTTTGGATTCTAAACCTATCGTGTCAAGCAACAAAGTTAGAGTCTGCTCTTGGGACCCGTGCCCACGAATCCGTCTATGCGCTAACTATTAAACCAATGTTCTATTAGCTACATGGAAATCAATTTCTTAGCAAGTTATTAACATACAAGCTGCGAGTTAGGGCGTCAATCTAACCTACTGCGCATGCAAATAATACTAACTGAATCCGAAATACAATAGCAATAGGAAATTAAATAGACATTCATAACAAGAAACTCACAAAGAAATACATTCTATATCCCAAAAATCATCCAATCGGCGTCAACGGGTTTAGACGACGGTCAAGCCAGCTAAAACCCACGACCCAACGCAACAATAACAAGAAAATACAAAGGATATGGAAAGGGAAACTTACACCTCTTAATTCTAGTCTTGAAGGACAAAAAGAACAGACAAGAAGGCCAAAAATAAAACCCTAAAAATTGATACATTTGGCGAAACAAAAACGAAGGTATTTATAGAAAAATTTGTCGTGGCGTCTCGACACTGGGCATGGCGTCTCGACGACGTGCCATATTGCCTTCGGGCTGGAAATTGGCAAGCGTCGAGATGCTGGCCACGACGTCGAAATGCCTAACCTACTTTCAATGTGCTTTGACTTCGATCTTCGTCGTTTCTTGCTCGATTCGGACCTCAAACTTTTGACTCCTTGGAACTATTCTTTGGGCTCGTCACGATCCTCAAGGTCTTCTCACCTCCTCGATATCCATGGCCCTCAAGTTAGCTCGAAAAATCTTTAAATAGCCCGAATTAACTCCAATTTTTGTAGTTCGACCCTCATGCCTTGAATGCACAAATTATCTACAAAACAGACAAATAAAGCGTAAAGTGCACCCTAAAAAGTCTAGATTAACAACAAATAAATAGGACTATTTTAGTCCTATCATGCCCTTGCGAGGTCGGGTGGTGGAATTCTCAACAAAGCAAATCAATCAGGTCTTCCGATTGCCATCCCTACGTTATCCAGCTGGCAACATGGCCATTGAAGAGCCTACATCAGAGCAGCTAGCAGAGGCCCTTCCACGGTGGTCCACGATGGAGTAAAGTGGCAAGAGTCTAGGAAAGGGATCAGGACACTCTTATCTGGAGATCTGAAGCCAGAAGCAGCAGTCTGGCTATACATGATCAAGAAGAGGATCATGCCTTCAACGCATGACACGACCATTTCTCAAGAGCGTGTCATGCTATTGTACAACATGCATAAAGGGTTGGATCTCAACCTCGACTGA

mRNA sequence

ATGCCTACAAAGAAGCCGAGAGTGGAAAGACAGGCATTTTCCACCAAGACAAGACCTCTCCCAGCTTTCATAGAGGATATCTTGTGCATGTATGGCTGGGACCGACTGAGCAAGGAGTCGAAGGCAGCCTCCATCCCTCTGAAAAATTTGTCGTGGCGTCTCGACACTGGGCATGGCGTCTCGACGACGTGCCATATTGCCTTCGGGCTGGAAATTGGCAAGCGTCGAGATGCTGGCCACGACGTCGAAATGCCTAACCTACTTTCAATGTGCTTTGACTTCGATCTTCGTCGTTTCTTGCTCGATTCGGACCTCAAACTTTTGACTCCTTGGAACTATTCTTTGGGCTCGTCACGATCCTCAAGAGCCTACATCAGAGCAGCTAGCAGAGGCCCTTCCACGGTGGTCCACGATGGAGTAAAGTGGCAAGAGTCTAGGAAAGGGATCAGGACACTCTTATCTGGAGATCTGAAGCCAGAAGCAGCAGTCTGGCTATACATGATCAAGAAGAGGATCATGCCTTCAACGCATGACACGACCATTTCTCAAGAGCGTGTCATGCTATTGTACAACATGCATAAAGGGTTGGATCTCAACCTCGACTGA

Coding sequence (CDS)

ATGCCTACAAAGAAGCCGAGAGTGGAAAGACAGGCATTTTCCACCAAGACAAGACCTCTCCCAGCTTTCATAGAGGATATCTTGTGCATGTATGGCTGGGACCGACTGAGCAAGGAGTCGAAGGCAGCCTCCATCCCTCTGAAAAATTTGTCGTGGCGTCTCGACACTGGGCATGGCGTCTCGACGACGTGCCATATTGCCTTCGGGCTGGAAATTGGCAAGCGTCGAGATGCTGGCCACGACGTCGAAATGCCTAACCTACTTTCAATGTGCTTTGACTTCGATCTTCGTCGTTTCTTGCTCGATTCGGACCTCAAACTTTTGACTCCTTGGAACTATTCTTTGGGCTCGTCACGATCCTCAAGAGCCTACATCAGAGCAGCTAGCAGAGGCCCTTCCACGGTGGTCCACGATGGAGTAAAGTGGCAAGAGTCTAGGAAAGGGATCAGGACACTCTTATCTGGAGATCTGAAGCCAGAAGCAGCAGTCTGGCTATACATGATCAAGAAGAGGATCATGCCTTCAACGCATGACACGACCATTTCTCAAGAGCGTGTCATGCTATTGTACAACATGCATAAAGGGTTGGATCTCAACCTCGACTGA

Protein sequence

MPTKKPRVERQAFSTKTRPLPAFIEDILCMYGWDRLSKESKAASIPLKNLSWRLDTGHGVSTTCHIAFGLEIGKRRDAGHDVEMPNLLSMCFDFDLRRFLLDSDLKLLTPWNYSLGSSRSSRAYIRAASRGPSTVVHDGVKWQESRKGIRTLLSGDLKPEAAVWLYMIKKRIMPSTHDTTISQERVMLLYNMHKGLDLNLD

Homology

[Close]

BLAST of Lag0005752 vs. NCBI nr
Match: XP_038904385.1 (uncharacterized protein LOC120090747 [Benincasa hispida])

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-08
Identity = 29/63 (46.03%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 134 TVVHDGVKWQESRKGIRTLLSGDLKPEAAVWLYMIKKRIMPSTHDTTISQERVMLLYNMH 193
           T+   G +W  S KGI+TL S  L PEA +W+Y++K+RI+P++HD T+S++RVM  Y + 
Sbjct: 277 TLTQSGTQWSVSLKGIKTLASSKLLPEARLWVYLVKRRIIPTSHDKTVSRDRVMAAYCIA 336

Query: 194 KGL 197
            G+
Sbjct: 337 CGI 339

[Close]

BLAST of Lag0005752 vs. NCBI nr
Match: PON62892.1 (hypothetical protein PanWU01x14_135680 [Parasponia andersonii])

HSP 1 Score: 66.6 bits (161), Expect = 2.7e-07
Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 134 TVVHDGVKWQESRKGIRTLLSGDLKPEAAVWLYMIKKRIMPSTHDTTISQERVMLLYNMH 193
           TV   G +W  S +G  T L   L P A VW + +K R++P+TH  T+S+ERV+LLY+M 
Sbjct: 54  TVAIAGAEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKERVLLLYSML 113

Query: 194 KGLDLNL 201
            G  +N+
Sbjct: 114 TGKSINV 120

[Close]

BLAST of Lag0005752 vs. NCBI nr
Match: PON50458.1 (hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii])

HSP 1 Score: 65.9 bits (159), Expect = 4.7e-07
Identity = 27/67 (40.30%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 134 TVVHDGVKWQESRKGIRTLLSGDLKPEAAVWLYMIKKRIMPSTHDTTISQERVMLLYNMH 193
           TV   G +W  S +G+ T L   L P A +W + +K R++P+TH   +S+ERV+LLY+M 
Sbjct: 64  TVAIAGAEWNVSSQGVYTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLLYSML 123

Query: 194 KGLDLNL 201
            G  +N+
Sbjct: 124 TGKSINM 130

[Close]

BLAST of Lag0005752 vs. NCBI nr
Match: PON70375.1 (hypothetical protein PanWU01x14_080440 [Parasponia andersonii])

HSP 1 Score: 63.2 bits (152), Expect = 3.0e-06
Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 134 TVVHDGVKWQESRKGIRTLLSGDLKPEAAVWLYMIKKRIMPSTHDTTISQERVMLLYNMH 193
           TV   G +W  S +G  T L   L P A VW + +K R++P+TH  T+S+E V LLY+M 
Sbjct: 168 TVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKEHVSLLYSML 227

Query: 194 KGLDLNL 201
            G  +N+
Sbjct: 228 TGKSINV 234

[Close]

BLAST of Lag0005752 vs. NCBI nr
Match: EXB53755.1 (hypothetical protein L484_022412 [Morus notabilis])

HSP 1 Score: 61.6 bits (148), Expect = 8.8e-06
Identity = 25/67 (37.31%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 135 VVHDGVKWQESRKGIRTLLSGDLKPEAAVWLYMIKKRIMPSTHDTTISQERVMLLYNMHK 194
           V  +G  WQ S +G  T +  +LK  A +W + +  R MPSTH  T++++RV+LLY++  
Sbjct: 92  VAIEGATWQISPQGAYTCIRKELKRHAQIWYHFLTARFMPSTHGKTVAKDRVLLLYSILT 151

Query: 195 GLDLNLD 202
           G+ +N++
Sbjct: 152 GISVNIE 158

[Close]

BLAST of Lag0005752 vs. ExPASy TrEMBL
Match: A0A2P5CPE8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-07
Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 134 TVVHDGVKWQESRKGIRTLLSGDLKPEAAVWLYMIKKRIMPSTHDTTISQERVMLLYNMH 193
           TV   G +W  S +G  T L   L P A VW + +K R++P+TH  T+S+ERV+LLY+M 
Sbjct: 54  TVAIAGAEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKERVLLLYSML 113

Query: 194 KGLDLNL 201
            G  +N+
Sbjct: 114 TGKSINV 120

[Close]

BLAST of Lag0005752 vs. ExPASy TrEMBL
Match: A0A2P5BNT0 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_223230 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.3e-07
Identity = 27/67 (40.30%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 134 TVVHDGVKWQESRKGIRTLLSGDLKPEAAVWLYMIKKRIMPSTHDTTISQERVMLLYNMH 193
           TV   G +W  S +G+ T L   L P A +W + +K R++P+TH   +S+ERV+LLY+M 
Sbjct: 64  TVAIAGAEWNVSSQGVYTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLLYSML 123

Query: 194 KGLDLNL 201
            G  +N+
Sbjct: 124 TGKSINM 130

[Close]

BLAST of Lag0005752 vs. ExPASy TrEMBL
Match: A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.5e-06
Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 134 TVVHDGVKWQESRKGIRTLLSGDLKPEAAVWLYMIKKRIMPSTHDTTISQERVMLLYNMH 193
           TV   G +W  S +G  T L   L P A VW + +K R++P+TH  T+S+E V LLY+M 
Sbjct: 168 TVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKEHVSLLYSML 227

Query: 194 KGLDLNL 201
            G  +N+
Sbjct: 228 TGKSINV 234

[Close]

BLAST of Lag0005752 vs. ExPASy TrEMBL
Match: W9QTD9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.3e-06
Identity = 25/67 (37.31%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 135 VVHDGVKWQESRKGIRTLLSGDLKPEAAVWLYMIKKRIMPSTHDTTISQERVMLLYNMHK 194
           V  +G  WQ S +G  T +  +LK  A +W + +  R MPSTH  T++++RV+LLY++  
Sbjct: 92  VAIEGATWQISPQGAYTCIRKELKRHAQIWYHFLTARFMPSTHGKTVAKDRVLLLYSILT 151

Query: 195 GLDLNLD 202
           G+ +N++
Sbjct: 152 GISVNIE 158

[Close]

BLAST of Lag0005752 vs. ExPASy TrEMBL
Match: A0A2P5B5S0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_268850 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 5.6e-06
Identity = 27/67 (40.30%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 134 TVVHDGVKWQESRKGIRTLLSGDLKPEAAVWLYMIKKRIMPSTHDTTISQERVMLLYNMH 193
           TV   GV+W  S +G    L   L P A VW + +K  ++P+TH   +S+ERV+LLY+M 
Sbjct: 95  TVAIAGVEWNVSFQGAYIYLRSSLNPHAKVWYHFLKSHLLPTTHGKIVSKERVLLLYSML 154

Query: 194 KGLDLNL 201
            G  +N+
Sbjct: 155 TGKSINV 161

The following BLAST results are available for this feature:

BLAST of Lag0005752 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904385.1	1.1e-08	46.03	uncharacterized protein LOC120090747 [Benincasa hispida]	[more]
PON62892.1	2.7e-07	43.28	hypothetical protein PanWU01x14_135680 [Parasponia andersonii]	[more]
PON50458.1	4.7e-07	40.30	hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]	[more]
PON70375.1	3.0e-06	41.79	hypothetical protein PanWU01x14_080440 [Parasponia andersonii]	[more]
EXB53755.1	8.8e-06	37.31	hypothetical protein L484_022412 [Morus notabilis]	[more]

BLAST of Lag0005752 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0005752 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5CPE8	1.3e-07	43.28	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE...	[more]
A0A2P5BNT0	2.3e-07	40.30	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5DAQ2	1.5e-06	41.79	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE...	[more]
W9QTD9	4.3e-06	37.31	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1	[more]
A0A2P5B5S0	5.6e-06	40.30	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_268850 PE...	[more]

BLAST of Lag0005752 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0005752.1	Lag0005752.1	mRNA