Lag0005699 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0005699
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Locationchr6: 26505240 .. 26508609 (+)
RNA-Seq ExpressionLag0005699
SyntenyLag0005699
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTTTCCACCGGAACCCCTGCATTTGGAGCCCTTTTCCTTGAACTTTATGTTAGTCTCCTTCTTATCCACAAAAAAAGAACAAAAAATAAAAAAACCAACGTATAGGAGTTGGGTTCTTGTAATTTGTAAATATTCATTGTTGGGCAATAATATTTGTAGTACAAAATTGAGGGGCTGAAAATCATTACTAGTGCTGAAGCTACTGAGAATTGTTTCTGTAATTATTAACGGAGATATTGGAGAGGTTCTGAAGGGGTGAAACTTTAGAACCGAGACTGATAGGAAGGCTATATTATATGGGTTGCTAGATAAATTTTTAATCCACATTTTGTTACATGGGTGTCTGAATTTTTAATCAACTTGGATCAGAAGAACTTGTTATCATACTTCGAGAACTCATGGAAGGCTATTAAGCCAATTTTATGCTTGGTTTCTATACCTATGTGTTTCTTTTTGATAGGAAACAATACCATGTCACTTGAAGAAATGGAACATTTTTTTTTTGATAAATAGCCGAACTTTCATTGAGAAAAAATGAAAAAATACAAGGGGATACAAAAAAGAGAGGCAAACTACAAAAAGGTCTCCAATCAAGAGAAATGGGTCCTAATAGATAATTACAAAAGGGCTTTGTCACAGACGCCAACCACTTATCCTCCCAAGAAAAAGTGTTCCTCCCATCCCCAACTGAGTAATGAACAAAAAGAGAGAAGAAAGTAGACTCCTCCAATGACTTGACCTCCTATTTCCTATAACCTGCAACTCGCTATTAACCATCTCAGTTTATTCAACTAGAGAGCCAACCGTCTTTGTTTAGTGGTTGTCTTTATTCCCTTCCCTGTGCCACTAGATTGCTTGGACTTTATGACATCAAATTATATGAGATTAATGTAAAGGTCTCTCTCTAGTGAGTGCCCTTGGTCGATATTTCTTTTTGTATTTATGTTTTGGAGTTTGTTAAAGTTGTATTTGTGTTTTTGGCTATGTTTTGTATCTCAGTTTATTCAACTAGAGAGCCAACCGTCTTTGTATAGTGGTTGTCTTTATTCCCTTCCCTGTGCCACTAGATTGCTTGGACTTTATGACATCAAATTATATGAGATTAATGTAAAGGTCTCTCTCTAGTGAGTGCCCTTGGTCGATATTTCTTTTTGTATTTATGTTTTGAAGTTTGTTAAAGTTGTATTTGTGTTTTTGGCTATGTTTGGTGTTGCTTTTGGGTTATTTGGTTGCAAGGTTGTAGCTCAGACGAGGTCTTCTTGACAGAGGATTACATAGTTGGGTGGCCTTAGTGGAAAAGCTTAGTGTGGTGCAATTGGGTAATGACGAGCATCAAATTCATTGGTCCCTTGAGGAATTTGGAGCTTACTCTAGCAAATCAATTTTAAAATCTCTCTTTACTAGAACAAACAAGGTTGACACAACTTTACGAATTACATATGGAAGCATAAAAGCCCTAAGAAAGTTAAAGTCTTCCAGTGGTTTTTGGTCTACAGAACCTAAACACGGATGATAGACTTCAAAGGAAATTTTCGAATGGGTCCCTCTTGCCCTCAGGATGTAGGTTGTGTTTGAATAAGGAAGAGACTTTAGATCACTTGTTCCTCCATTGTGATTTTTCCACTTGCTCGTGGAACTATTTGATGGGTTTGTTGGGAATTTCTTACTACATTCCTAAGAAAGTGAACGATTGGCTGGATTAAATGCGTGGAATTTGAAAGGGAAAGTAAGGTGATGGGGAGCTGAGAGCTCTTTTGTGGTACTTGTGGAAGGAAATGAACGCTAGAGTTTTTGAAGATAAGTCCTTGTGTTTTAATTCTTTTTATAACGTTGTACAAAATACATCGTCTTGGTAGATTTCTTTACACACAAAATTCTTTTATAATTATAGCCTCTTGATGATAATCAATGATTGGAAGGCTCTTACGATGTAGTTTGGGGGGGGGACCTCAACCCCAACCCTTAGGCTGTTCTGGTTGTTTTTGTGGAATATATTCCTCCTTTCGTTTCTTATTAAAAAAAAATCTGGCTCTGTTGCTGCTGCTTTTGCTTGATATTTTTGAGGGTTGCGGTTGTTCCATGTCCACCTTTGTTTTCCGTCTTTGGTTGGAGATTTTTTAGCAACGCACTCTACCGAAAGTTATAAGCTTTTGTCTTTGTTGTTGCCCTTGAAATTTCTCTCTTTGTGCTATTTTTGGTGTAGCATTTGTAGTTTGGTTTGGTGTTTTTTGGCCCTTTTTAGTTGTTATTTTTCAGGCTCTTGTATTTTTGGTGTTTTGTTTTTTTGGGTGTTTTATTCTCTCTCCCTCAAGGAGGTTGTATCCTTGAACACTTTTCTTCCTTTTCATCATCTATCAATGAATTCTTTTTTTCTTCTTAAAAAAAAAGAGATTGCCTTGACCTTACCATCCCAAGGGATGGACATCCCCACCCACTGGCTTGCTAAGTGGGGGTCTAGAGCTGGGCAATTTGAGAATTCGTAACAAAGCCTTGCTTGCTAAGTGGCTTTGGCGTTTCCGCCTGAAACTTGATTCTCTTTAGGTTTGGATTATTGTGAGTAAATATGGGCAGCATCCCTTCATGTGGTTGTTAGATGGGGTCAAAGGCACCTTCAAGAATCCTTGGAAAGACATATCTTTGGAGCTTCCCTCTTTCTCTTAGTCCAATGCATAGTGGGTGATGGGAGATGCATTTTTTTTCTGGGAGGATTTTTGGGTGGGGGTCGTTCCCTCTACTCCTTGTTCTCGCGTCTATATCATTTATCATCAATGAAAAATCGCACTGTGGCTGATGTCCTTGGATCCGTGGGGAATTCCACCTCCTTTTCCTTTGGTTTTCTTCGTCCGTTATTTGATAGAGAAACCGCAGACATCATGACCCTCTTATCCCTGCTTGAGAGGGTTAGCCTTAGACCGGATAGGAGGGATGTTCACTTATGGAGTCTCGATCCCTATGGGGGCTTTTCTTGCAGGCCGTTCTTTCATTTTTGGTCAATCCTCAATGGTTAGAGAGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTTGTGGAAGGTTAAAGCTCCAAAGAAAGTTCTGTTCTTCGTTTGGCAGGTCACCTTGGGTCGTGTTTACACTTTTGATAGGCTTTCGAGAGTGAAGGCCCCTGTGGTTGGCCCTTTCTGTTGCATTCTATGTTGGAAGGTGGAGGAGGATCTTGATCATTTGTTGTGGGGTTGTGAGTTTACTCGCTCAATCTAGAGCCTTTTCTTTGAGGTTTTCGAGTTTCAAATTGTGGCCAGTGTTGTTGTAGGGAGATGATCGAGGAGTTCCTCCTCCATCTGCTGTTTCGGGAGAAGGGAAGGTTCTTTTGGCATGCTAA

mRNA sequence

ATGGCGTTTTCCACCGGAACCCCTGCATTTGGAGCCCTTTTCCTTGAACTTTATTTTATTCAACTAGAGAGCCAACCGTCTTTGTATAGTGGTTGTCTTTATTCCCTTCCCTGTGCCACTAGATTGCTTGGACTTTATGACATCAAATTATATGAGATTAATGTAAAGCTCAGACGAGGTCTTCTTGACAGAGGATTACATAGTTGGGTGGCCTTAGTGGAAAAGCTTAGTGTGGTGCAATTGGGTAATGACGAGCATCAAATTCATTGGTCCCTTGAGGAATTTGGAGCTTACTCTAGCAAATCAATTTTAAAATCTCTCTTTACTAGAACAAACAAGAACCTAAACACGGATGATAGACTTCAAAGGAAATTTTCGAATGGGTCCCTCTTGCCCTCAGGATCATCCCTTCATGTGGTTGTTAGATGGGGTCAAAGGCACCTTCAAGAATCCTTGGAAAGACATATCTTTGGAGCTTCCCTCTTTCTCTTAGTCCAATGCATAGTGGGTGATGGGAGATGCATTTTTTTTCTGGGAGGATTTTTGGGTGGGGGTCGTTCCCTCTACTCCTTGTTCTCGCGTCTATATCATTTATCATCAATGAAAAATCGCACTGTGGCTGATGTCCTTGGATCCGTGGGGAATTCCACCTCCTTTTCCTTTGGTTTTCTTCGTCCGTTATTTGATAGAGAAACCGCAGACATCATGACCCTCTTATCCCTGCTTGAGAGGGTTAAAGCTCCAAAGAAAGTTCTGTTCTTCGTTTGGCAGGTCACCTTGGGTCGTGTTTACACTTTTGATAGGCTTTCGAGAGTGAAGGCCCCTGTGGTTGGCCCTTTCTGTTGCATTCTATGTTGGAAGGGAGATGATCGAGGAGTTCCTCCTCCATCTGCTGTTTCGGGAGAAGGGAAGGTTCTTTTGGCATGCTAA

Coding sequence (CDS)

ATGGCGTTTTCCACCGGAACCCCTGCATTTGGAGCCCTTTTCCTTGAACTTTATTTTATTCAACTAGAGAGCCAACCGTCTTTGTATAGTGGTTGTCTTTATTCCCTTCCCTGTGCCACTAGATTGCTTGGACTTTATGACATCAAATTATATGAGATTAATGTAAAGCTCAGACGAGGTCTTCTTGACAGAGGATTACATAGTTGGGTGGCCTTAGTGGAAAAGCTTAGTGTGGTGCAATTGGGTAATGACGAGCATCAAATTCATTGGTCCCTTGAGGAATTTGGAGCTTACTCTAGCAAATCAATTTTAAAATCTCTCTTTACTAGAACAAACAAGAACCTAAACACGGATGATAGACTTCAAAGGAAATTTTCGAATGGGTCCCTCTTGCCCTCAGGATCATCCCTTCATGTGGTTGTTAGATGGGGTCAAAGGCACCTTCAAGAATCCTTGGAAAGACATATCTTTGGAGCTTCCCTCTTTCTCTTAGTCCAATGCATAGTGGGTGATGGGAGATGCATTTTTTTTCTGGGAGGATTTTTGGGTGGGGGTCGTTCCCTCTACTCCTTGTTCTCGCGTCTATATCATTTATCATCAATGAAAAATCGCACTGTGGCTGATGTCCTTGGATCCGTGGGGAATTCCACCTCCTTTTCCTTTGGTTTTCTTCGTCCGTTATTTGATAGAGAAACCGCAGACATCATGACCCTCTTATCCCTGCTTGAGAGGGTTAAAGCTCCAAAGAAAGTTCTGTTCTTCGTTTGGCAGGTCACCTTGGGTCGTGTTTACACTTTTGATAGGCTTTCGAGAGTGAAGGCCCCTGTGGTTGGCCCTTTCTGTTGCATTCTATGTTGGAAGGGAGATGATCGAGGAGTTCCTCCTCCATCTGCTGTTTCGGGAGAAGGGAAGGTTCTTTTGGCATGCTAA

Protein sequence

MAFSTGTPAFGALFLELYFIQLESQPSLYSGCLYSLPCATRLLGLYDIKLYEINVKLRRGLLDRGLHSWVALVEKLSVVQLGNDEHQIHWSLEEFGAYSSKSILKSLFTRTNKNLNTDDRLQRKFSNGSLLPSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRETADIMTLLSLLERVKAPKKVLFFVWQVTLGRVYTFDRLSRVKAPVVGPFCCILCWKGDDRGVPPPSAVSGEGKVLLAC
Homology
[Close]
BLAST of Lag0005699 vs. NCBI nr
Match: TYK09969.1 (calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-09
Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 0 

Query: 168 IVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPL 227
           ++  G+   F+G  LGG R L  LF  LYHLSS+KN  +AD L   GNS SFSFGF R L
Sbjct: 120 LIRGGKRDIFMGRPLGGERPLCGLFPCLYHLSSLKNHFMADFLVWNGNSCSFSFGFRRAL 179

Query: 228 FDRETADIMTLLSLLE 244
            DRET++++ L+SLLE
Sbjct: 180 SDRETSNVVALISLLE 195

[Close]
BLAST of Lag0005699 vs. NCBI nr
Match: RVW43468.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 72.0 bits (175), Expect = 1.0e-08
Identity = 59/176 (33.52%), Postives = 86/176 (48.86%), Query Frame = 0 

Query: 132  PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSL 191
            P+G   ++VVRW  R   +++ +     S F  V+ +VG+G  I F      G ++L S 
Sbjct: 850  PNGWDANMVVRWSHRCPWKAIAQVFQEFSPF--VRLVVGNGERIRFWEDLWWGNQTLCSQ 909

Query: 192  FSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRETADIMTLLSLLERV------ 251
            F+ LY + S+KN TV++VLG+     S++F F R L D E   +  L+S L  V      
Sbjct: 910  FADLYRVISVKNLTVSNVLGN-SLPLSWNFNFRRNLTDSEIDLLQRLMSSLNSVLLSPSS 969

Query: 252  -------KAPKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV 294
                   K P KV    W V  G+V T D+L  R     + P  CILC KG+   +
Sbjct: 970  SDSKACSKVPSKVKALAWLVAHGKVNTNDKLQLRRPYKALCPQWCILC-KGNGESI 1021

[Close]
BLAST of Lag0005699 vs. NCBI nr
Match: RVX09324.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 69.7 bits (169), Expect = 5.0e-08
Identity = 57/167 (34.13%), Postives = 84/167 (50.30%), Query Frame = 0 

Query: 132 PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSL 191
           P+G   ++VVRW  R   +++ +     S F  V+ +VG+G  I F      G +SL S 
Sbjct: 654 PNGWDANMVVRWSHRCPWKAIAQVFQEFSPF--VRLVVGNGERIRFWEDLWWGNQSLCSQ 713

Query: 192 FSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRETADIMTLLSLLERV----KA 251
           F  LY + S+KN TV++VLG+     +++  F R L D E   +  L+S L +     K 
Sbjct: 714 FVDLYRVISVKNLTVSNVLGN-SFPLAWNLNFRRNLTDSEIDLLQRLMSSLTKFLWSSKV 773

Query: 252 PKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV 294
           P KV    W V  G+V T D+L  R     + P  CILC KG+   +
Sbjct: 774 PSKVKALAWIVAHGKVNTNDKLQLRRPYKSLCPQWCILC-KGNGESI 816

[Close]
BLAST of Lag0005699 vs. NCBI nr
Match: RVW15385.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 67.0 bits (162), Expect = 3.2e-07
Identity = 57/185 (30.81%), Postives = 86/185 (46.49%), Query Frame = 0 

Query: 132  PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSL 191
            P+G   ++VVRW  R   +++ +     S F  V+ +VG+G  I F      G ++L + 
Sbjct: 1210 PNGWDANMVVRWSHRCPWKAIAQVFQEFSPF--VRLVVGNGERIRFWEDLWWGNQTLCAQ 1269

Query: 192  FSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRETADIMTLLSLLERV------ 251
            F+ LY + S++N TV++VLG+     S++F F R L D E   +  L+S L  V      
Sbjct: 1270 FAELYRVISVRNLTVSNVLGN-SFPLSWNFNFRRNLTDSEIDLLQRLMSSLHSVLLSPSH 1329

Query: 252  ----------------KAPKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKG 294
                            K P KV    W V  G+V T D+L  R     + P  CILC KG
Sbjct: 1330 QTQERGLCLRQFLWSSKVPSKVKALAWLVAHGKVNTNDKLQLRRPYKALCPQWCILC-KG 1389

[Close]
BLAST of Lag0005699 vs. NCBI nr
Match: RVX05721.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 66.6 bits (161), Expect = 4.2e-07
Identity = 69/259 (26.64%), Postives = 115/259 (44.40%), Query Frame = 0 

Query: 62   LDRGLHSWVALVEKLSVVQLGNDEHQIHWSL----EEFGAYSSKSILKSLFTRTNKNLNT 121
            LD    ++++L  +++++Q    +H + W +    +E G    + I         K L  
Sbjct: 1029 LDGWKKAYLSLGGRITLIQSWKKDHLVRWEVVSKPKESGGLGFRKISLRNIALLGKWLWR 1088

Query: 122  DDRLQRKFSNGSLL------PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGD 181
              R +    +  ++      P+G   ++VVRW  R   +++ +     S F  V+ +VG+
Sbjct: 1089 FPRERSGLWHKVIVSIYGTHPNGWDANMVVRWSHRCPWKAIAQVFQEFSPF--VRLVVGN 1148

Query: 182  GRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRE 241
            G  I F      G +SL S F+ LY + S+KN TV++VLG+     +++  F R L D E
Sbjct: 1149 GERIRFWEDLWWGNQSLCSQFADLYRVISVKNLTVSNVLGN-SFPLAWNLNFRRNLTDSE 1208

Query: 242  TADIMTLLSLLERVK----------------APKKVLFFVWQVTLGRVYTFDRLS-RVKA 294
               +  L+S L  V+                 P KV    W V  G+V T D+L  R   
Sbjct: 1209 IDLLQRLMSSLSSVRFSPSLADSRAWSLSSLVPSKVKALAWIVAHGKVNTNDKLQLRRPY 1268

[Close]
BLAST of Lag0005699 vs. ExPASy TrEMBL
Match: A0A5D3CI74 (Calpain-type cysteine protease DEK1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00980 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.5e-10
Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 0 

Query: 168 IVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPL 227
           ++  G+   F+G  LGG R L  LF  LYHLSS+KN  +AD L   GNS SFSFGF R L
Sbjct: 120 LIRGGKRDIFMGRPLGGERPLCGLFPCLYHLSSLKNHFMADFLVWNGNSCSFSFGFRRAL 179

Query: 228 FDRETADIMTLLSLLE 244
            DRET++++ L+SLLE
Sbjct: 180 SDRETSNVVALISLLE 195

[Close]
BLAST of Lag0005699 vs. ExPASy TrEMBL
Match: A0A438E711 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_71 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 4.9e-09
Identity = 59/176 (33.52%), Postives = 86/176 (48.86%), Query Frame = 0 

Query: 132  PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSL 191
            P+G   ++VVRW  R   +++ +     S F  V+ +VG+G  I F      G ++L S 
Sbjct: 850  PNGWDANMVVRWSHRCPWKAIAQVFQEFSPF--VRLVVGNGERIRFWEDLWWGNQTLCSQ 909

Query: 192  FSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRETADIMTLLSLLERV------ 251
            F+ LY + S+KN TV++VLG+     S++F F R L D E   +  L+S L  V      
Sbjct: 910  FADLYRVISVKNLTVSNVLGN-SLPLSWNFNFRRNLTDSEIDLLQRLMSSLNSVLLSPSS 969

Query: 252  -------KAPKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV 294
                   K P KV    W V  G+V T D+L  R     + P  CILC KG+   +
Sbjct: 970  SDSKACSKVPSKVKALAWLVAHGKVNTNDKLQLRRPYKALCPQWCILC-KGNGESI 1021

[Close]
BLAST of Lag0005699 vs. ExPASy TrEMBL
Match: A0A438JK46 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_207 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.4e-08
Identity = 57/167 (34.13%), Postives = 84/167 (50.30%), Query Frame = 0 

Query: 132 PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSL 191
           P+G   ++VVRW  R   +++ +     S F  V+ +VG+G  I F      G +SL S 
Sbjct: 654 PNGWDANMVVRWSHRCPWKAIAQVFQEFSPF--VRLVVGNGERIRFWEDLWWGNQSLCSQ 713

Query: 192 FSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRETADIMTLLSLLERV----KA 251
           F  LY + S+KN TV++VLG+     +++  F R L D E   +  L+S L +     K 
Sbjct: 714 FVDLYRVISVKNLTVSNVLGN-SFPLAWNLNFRRNLTDSEIDLLQRLMSSLTKFLWSSKV 773

Query: 252 PKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV 294
           P KV    W V  G+V T D+L  R     + P  CILC KG+   +
Sbjct: 774 PSKVKALAWIVAHGKVNTNDKLQLRRPYKSLCPQWCILC-KGNGESI 816

[Close]
BLAST of Lag0005699 vs. ExPASy TrEMBL
Match: A0A438BWL9 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_12 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-07
Identity = 57/185 (30.81%), Postives = 86/185 (46.49%), Query Frame = 0 

Query: 132  PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSL 191
            P+G   ++VVRW  R   +++ +     S F  V+ +VG+G  I F      G ++L + 
Sbjct: 1210 PNGWDANMVVRWSHRCPWKAIAQVFQEFSPF--VRLVVGNGERIRFWEDLWWGNQTLCAQ 1269

Query: 192  FSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRETADIMTLLSLLERV------ 251
            F+ LY + S++N TV++VLG+     S++F F R L D E   +  L+S L  V      
Sbjct: 1270 FAELYRVISVRNLTVSNVLGN-SFPLSWNFNFRRNLTDSEIDLLQRLMSSLHSVLLSPSH 1329

Query: 252  ----------------KAPKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKG 294
                            K P KV    W V  G+V T D+L  R     + P  CILC KG
Sbjct: 1330 QTQERGLCLRQFLWSSKVPSKVKALAWLVAHGKVNTNDKLQLRRPYKALCPQWCILC-KG 1389

[Close]
BLAST of Lag0005699 vs. ExPASy TrEMBL
Match: A0A438J9S5 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_690 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-07
Identity = 69/259 (26.64%), Postives = 115/259 (44.40%), Query Frame = 0 

Query: 62   LDRGLHSWVALVEKLSVVQLGNDEHQIHWSL----EEFGAYSSKSILKSLFTRTNKNLNT 121
            LD    ++++L  +++++Q    +H + W +    +E G    + I         K L  
Sbjct: 1029 LDGWKKAYLSLGGRITLIQSWKKDHLVRWEVVSKPKESGGLGFRKISLRNIALLGKWLWR 1088

Query: 122  DDRLQRKFSNGSLL------PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGD 181
              R +    +  ++      P+G   ++VVRW  R   +++ +     S F  V+ +VG+
Sbjct: 1089 FPRERSGLWHKVIVSIYGTHPNGWDANMVVRWSHRCPWKAIAQVFQEFSPF--VRLVVGN 1148

Query: 182  GRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRE 241
            G  I F      G +SL S F+ LY + S+KN TV++VLG+     +++  F R L D E
Sbjct: 1149 GERIRFWEDLWWGNQSLCSQFADLYRVISVKNLTVSNVLGN-SFPLAWNLNFRRNLTDSE 1208

Query: 242  TADIMTLLSLLERVK----------------APKKVLFFVWQVTLGRVYTFDRLS-RVKA 294
               +  L+S L  V+                 P KV    W V  G+V T D+L  R   
Sbjct: 1209 IDLLQRLMSSLSSVRFSPSLADSRAWSLSSLVPSKVKALAWIVAHGKVNTNDKLQLRRPY 1268

The following BLAST results are available for this feature:
BLAST of Lag0005699 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK09969.11.5e-0953.95calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa][more]
RVW43468.11.0e-0833.52LINE-1 retrotransposable element ORF2 protein [Vitis vinifera][more]
RVX09324.15.0e-0834.13LINE-1 retrotransposable element ORF2 protein [Vitis vinifera][more]
RVW15385.13.2e-0730.81putative ribonuclease H protein [Vitis vinifera][more]
RVX05721.14.2e-0726.64Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera][more]
BLAST of Lag0005699 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0005699 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CI747.5e-1053.95Calpain-type cysteine protease DEK1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A438E7114.9e-0933.52LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF... [more]
A0A438JK462.4e-0834.13LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF... [more]
A0A438BWL91.6e-0730.81Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_12 PE... [more]
A0A438J9S52.0e-0726.64Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX... [more]
BLAST of Lag0005699 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0005699.1Lag0005699.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043170 macromolecule metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0044238 primary metabolic process
cellular_component GO:0110165 cellular anatomical entity
molecular_function GO:0003824 catalytic activity