Lag0005654 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGAGCAGATTGTCGAATGCGAACATGGTGGTGGCGGCGCTCATCGCGACAGTAACCTTCAGTGCGGCCTTTCAGGTTCCCGGTGGATACGACAACAACGGCCTGGCGGTGCTACGAAAAAAAGAATCTTTCGGCCGCTACTTGATATTGGATGCTGTATCCTTTTGGTTAGCAGTGGCTTCCATGTCCCTCACCTTCTTAACACATTTTTTCCGTACGACCAAATTTGCTCCGAGTGACTTGGTGTTGTACTTGACGGGTTGGTCTCTTTTTTTCATGGTATTTGCATTCTATGAAGGGATAACTTTGGTCATAAAGGATGGGGAACGTTCACGCTTCTCAACACTGTTGGGTCTTCTGTCTGATATTTACATTCCACTTATATTGCTTATAGGCTTTATCTTACCTTTATGGGGCTCCTGGGATTTGCAAGAATGA ATGTGGAGCAGATTGTCGAATGCGAACATGGTGGTGGCGGCGCTCATCGCGACAGTAACCTTCAGTGCGGCCTTTCAGGTTCCCGGTGGATACGACAACAACGGCCTGGCGGTGCTACGAAAAAAAGAATCTTTCGGCCGCTACTTGATATTGGATGCTGTATCCTTTTGGTTAGCAGTGGCTTCCATGTCCCTCACCTTCTTAACACATTTTTTCCGTACGACCAAATTTGCTCCGAGTGACTTGGTGTTGTACTTGACGGGTTGGTCTCTTTTTTTCATGGTATTTGCATTCTATGAAGGGATAACTTTGGTCATAAAGGATGGGGAACGTTCACGCTTCTCAACACTGTTGGGTCTTCTGTCTGATATTTACATTCCACTTATATTGCTTATAGGCTTTATCTTACCTTTATGGGGCTCCTGGGATTTGCAAGAATGA ATGTGGAGCAGATTGTCGAATGCGAACATGGTGGTGGCGGCGCTCATCGCGACAGTAACCTTCAGTGCGGCCTTTCAGGTTCCCGGTGGATACGACAACAACGGCCTGGCGGTGCTACGAAAAAAAGAATCTTTCGGCCGCTACTTGATATTGGATGCTGTATCCTTTTGGTTAGCAGTGGCTTCCATGTCCCTCACCTTCTTAACACATTTTTTCCGTACGACCAAATTTGCTCCGAGTGACTTGGTGTTGTACTTGACGGGTTGGTCTCTTTTTTTCATGGTATTTGCATTCTATGAAGGGATAACTTTGGTCATAAAGGATGGGGAACGTTCACGCTTCTCAACACTGTTGGGTCTTCTGTCTGATATTTACATTCCACTTATATTGCTTATAGGCTTTATCTTACCTTTATGGGGCTCCTGGGATTTGCAAGAATGA MWSRLSNANMVVAALIATVTFSAAFQVPGGYDNNGLAVLRKKESFGRYLILDAVSFWLAVASMSLTFLTHFFRTTKFAPSDLVLYLTGWSLFFMVFAFYEGITLVIKDGERSRFSTLLGLLSDIYIPLILLIGFILPLWGSWDLQE Homology
BLAST of Lag0005654 vs. NCBI nr
Match: KAA0063588.1 (protein ACCELERATED CELL DEATH 6-like [Cucumis melo var. makuwa] >TYK18439.1 protein ACCELERATED CELL DEATH 6-like [Cucumis melo var. makuwa]) HSP 1 Score: 113.2 bits (282), Expect = 1.9e-21 Identity = 64/140 (45.71%), Postives = 96/140 (68.57%), Query Frame = 0
BLAST of Lag0005654 vs. NCBI nr
Match: XP_008456239.1 (PREDICTED: protein ACCELERATED CELL DEATH 6-like [Cucumis melo]) HSP 1 Score: 112.8 bits (281), Expect = 2.4e-21 Identity = 64/140 (45.71%), Postives = 96/140 (68.57%), Query Frame = 0
BLAST of Lag0005654 vs. NCBI nr
Match: KAG7030321.1 (Protein ACCELERATED CELL DEATH 6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 109.8 bits (273), Expect = 2.1e-20 Identity = 63/140 (45.00%), Postives = 90/140 (64.29%), Query Frame = 0
BLAST of Lag0005654 vs. NCBI nr
Match: XP_004139385.1 (protein ACCELERATED CELL DEATH 6 [Cucumis sativus] >KGN60785.1 hypothetical protein Csa_019478 [Cucumis sativus]) HSP 1 Score: 109.0 bits (271), Expect = 3.5e-20 Identity = 64/119 (53.78%), Postives = 82/119 (68.91%), Query Frame = 0
BLAST of Lag0005654 vs. NCBI nr
Match: KAG6599329.1 (Ankyrin repeat-containing protein ITN1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 107.8 bits (268), Expect = 7.8e-20 Identity = 58/110 (52.73%), Postives = 77/110 (70.00%), Query Frame = 0
BLAST of Lag0005654 vs. ExPASy Swiss-Prot
Match: A2CIR5 (Ankyrin repeat-containing protein NPR4 OS=Oryza sativa subsp. japonica OX=39947 GN=NPR4 PE=2 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 3.3e-05 Identity = 25/56 (44.64%), Postives = 38/56 (67.86%), Query Frame = 0
BLAST of Lag0005654 vs. ExPASy Swiss-Prot
Match: Q9C7A2 (Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana OX=3702 GN=ITN1 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 4.8e-04 Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|