Lag0005631 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0005631
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionC2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Locationchr6: 24411532 .. 24412174 (-)
RNA-Seq ExpressionLag0005631
SyntenyLag0005631
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAAGATGCAGAACAACAAAGCAGGATTTAGGGAAGGGGTTAGGGTTTTGAGAAGGCCGAATGGGAATTATTCTCCGAGAGTAATCAATAAGAAATTCATGGCCGAGACGAAGAGGATTCATCCATACGATCTAGTGGAGCCGATGCAGTACTTCTTCATCCGTATTGTAAAAGCCAGAAATGTCGCTTCGAATGAAAGCCCCTACTTACAGATTCGCACATCAGGCCGTTTCAAGAATTTGAAACCAGCAAGTCATCGGCCTGGTGAACCGACTGATTTGTCGGAATGGAACCAGGTATTTGCCCTCCGCCACAACAGACCTGATACGACAAACACGACACTGGAGATTACTGTCTGGGATACGCCATCGGAGCAGTTCCTCGGCGGCGTTTGCTTTGGTCTCTCCGATGTACCTGTGTGAGATCCATTCGATAGTCCACTGGCTCCTCAGTGGTACTGCCTCGAAGGCGGTGCCGGAGATCAACCAACCTCTAAAATTTATGGTGAAATTCAGCTCTCTGTTTGGATTGGAACTCAAGCTGACGACGCATTTCCAAAAGCTTGGTGCTCTGATGCGCCACACGTGGCTCATACAAGCTTATACACCCGTGGCTCCTCCCCGATTCGGTCTATTTTGA

mRNA sequence

ATGAGAAAGATGCAGAACAACAAAGCAGGATTTAGGGAAGGGGTTAGGGTTTTGAGAAGGCCGAATGGGAATTATTCTCCGAGAGTAATCAATAAGAAATTCATGGCCGAGACGAAGAGGATTCATCCATACGATCTAGTGGAGCCGATGCAGTACTTCTTCATCCGTATTGTAAAAGCCAGAAATGTCGCTTCGAATGAAAGCCCCTACTTACAGATTCGCACATCAGGCCGTTTCAAGAATTTGAAACCAGCAAGTCATCGGCCTGGTGAACCGACTGATTTGTCGGAATGGAACCAGGTATTTGCCCTCCGCCACAACAGACCTGATACGACAAACACGACACTGGAGATTACTGTCTGGGATACGCCATCGGAGCAGTTCCTCGGCGGCGTTTGCTTTGGTCTCTCCGATGTACCTGTCTCTCTGTTTGGATTGGAACTCAAGCTGACGACGCATTTCCAAAAGCTTGGTGCTCTGATGCGCCACACGTGGCTCATACAAGCTTATACACCCGTGGCTCCTCCCCGATTCGGTCTATTTTGA

Coding sequence (CDS)

ATGAGAAAGATGCAGAACAACAAAGCAGGATTTAGGGAAGGGGTTAGGGTTTTGAGAAGGCCGAATGGGAATTATTCTCCGAGAGTAATCAATAAGAAATTCATGGCCGAGACGAAGAGGATTCATCCATACGATCTAGTGGAGCCGATGCAGTACTTCTTCATCCGTATTGTAAAAGCCAGAAATGTCGCTTCGAATGAAAGCCCCTACTTACAGATTCGCACATCAGGCCGTTTCAAGAATTTGAAACCAGCAAGTCATCGGCCTGGTGAACCGACTGATTTGTCGGAATGGAACCAGGTATTTGCCCTCCGCCACAACAGACCTGATACGACAAACACGACACTGGAGATTACTGTCTGGGATACGCCATCGGAGCAGTTCCTCGGCGGCGTTTGCTTTGGTCTCTCCGATGTACCTGTCTCTCTGTTTGGATTGGAACTCAAGCTGACGACGCATTTCCAAAAGCTTGGTGCTCTGATGCGCCACACGTGGCTCATACAAGCTTATACACCCGTGGCTCCTCCCCGATTCGGTCTATTTTGA

Protein sequence

MRKMQNNKAGFREGVRVLRRPNGNYSPRVINKKFMAETKRIHPYDLVEPMQYFFIRIVKARNVASNESPYLQIRTSGRFKNLKPASHRPGEPTDLSEWNQVFALRHNRPDTTNTTLEITVWDTPSEQFLGGVCFGLSDVPVSLFGLELKLTTHFQKLGALMRHTWLIQAYTPVAPPRFGLF
Homology
BLAST of Lag0005631 vs. NCBI nr
Match: XP_023541423.1 (protein QUIRKY-like [Cucurbita pepo subsp. pepo] >XP_023541424.1 protein QUIRKY-like [Cucurbita pepo subsp. pepo] >XP_023541425.1 protein QUIRKY-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.9 bits (629), Expect = 1.3e-61
Identity = 117/141 (82.98%), Postives = 124/141 (87.94%), Query Frame = 0

Query: 1   MRKMQNNKAGFREGVRVLRRPNGNYSPRVINKKFMAETKRIHPYDLVEPMQYFFIRIVKA 60
           MRKMQNN+AGF EG RVLRRPNG+Y+PRVINKKFMAET+RIHPYDLVEPM Y FIRI KA
Sbjct: 286 MRKMQNNRAGFGEGARVLRRPNGDYAPRVINKKFMAETERIHPYDLVEPMHYLFIRIEKA 345

Query: 61  RNVASNESPYLQIRTSGRFKNLKPASHRPGEPTDLSEWNQVFALRHNRPDTTNTTLEITV 120
           RNVA NESPY +IRTSG FK   PASHRPGEPTD  EWNQVFALRHN+ DT N TLEI+V
Sbjct: 346 RNVAPNESPYFKIRTSGHFKKSNPASHRPGEPTDSPEWNQVFALRHNKSDTANRTLEISV 405

Query: 121 WDTPSEQFLGGVCFGLSDVPV 142
           WDTPSEQFLGGVCF LSDVPV
Sbjct: 406 WDTPSEQFLGGVCFDLSDVPV 426

BLAST of Lag0005631 vs. NCBI nr
Match: XP_022954974.1 (protein QUIRKY-like [Cucurbita moschata] >XP_022954975.1 protein QUIRKY-like [Cucurbita moschata] >XP_022954976.1 protein QUIRKY-like [Cucurbita moschata])

HSP 1 Score: 246.9 bits (629), Expect = 1.3e-61
Identity = 117/141 (82.98%), Postives = 124/141 (87.94%), Query Frame = 0

Query: 1   MRKMQNNKAGFREGVRVLRRPNGNYSPRVINKKFMAETKRIHPYDLVEPMQYFFIRIVKA 60
           MRKMQNN+AGF EG RVLRRPNG+Y+PRVINKKFMAET+RIHPYDLVEPM Y FIRI KA
Sbjct: 302 MRKMQNNRAGFGEGARVLRRPNGDYAPRVINKKFMAETERIHPYDLVEPMHYLFIRIEKA 361

Query: 61  RNVASNESPYLQIRTSGRFKNLKPASHRPGEPTDLSEWNQVFALRHNRPDTTNTTLEITV 120
           RNVA NESPY +IRTSG FK   PASHRPGEPTD  EWNQVFALRHN+ DT N TLEI+V
Sbjct: 362 RNVAPNESPYFKIRTSGHFKKSNPASHRPGEPTDSPEWNQVFALRHNKSDTANRTLEISV 421

Query: 121 WDTPSEQFLGGVCFGLSDVPV 142
           WDTPSEQFLGGVCF LSDVPV
Sbjct: 422 WDTPSEQFLGGVCFDLSDVPV 442

BLAST of Lag0005631 vs. NCBI nr
Match: KAG7012203.1 (Protein QUIRKY, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 246.9 bits (629), Expect = 1.3e-61
Identity = 117/141 (82.98%), Postives = 124/141 (87.94%), Query Frame = 0

Query: 1   MRKMQNNKAGFREGVRVLRRPNGNYSPRVINKKFMAETKRIHPYDLVEPMQYFFIRIVKA 60
           MRKMQNN+AGF EG RVLRRPNG+Y+PRVINKKFMAET+RIHPYDLVEPM Y FIRI KA
Sbjct: 310 MRKMQNNRAGFGEGARVLRRPNGDYAPRVINKKFMAETERIHPYDLVEPMHYLFIRIEKA 369

Query: 61  RNVASNESPYLQIRTSGRFKNLKPASHRPGEPTDLSEWNQVFALRHNRPDTTNTTLEITV 120
           RNVA NESPY +IRTSG FK   PASHRPGEPTD  EWNQVFALRHN+ DT N TLEI+V
Sbjct: 370 RNVAPNESPYFKIRTSGHFKKSNPASHRPGEPTDSPEWNQVFALRHNKSDTANRTLEISV 429

Query: 121 WDTPSEQFLGGVCFGLSDVPV 142
           WDTPSEQFLGGVCF LSDVPV
Sbjct: 430 WDTPSEQFLGGVCFDLSDVPV 450

BLAST of Lag0005631 vs. NCBI nr
Match: XP_022994561.1 (protein QUIRKY-like [Cucurbita maxima] >XP_022994562.1 protein QUIRKY-like [Cucurbita maxima] >XP_022994563.1 protein QUIRKY-like [Cucurbita maxima])

HSP 1 Score: 245.0 bits (624), Expect = 5.1e-61
Identity = 116/141 (82.27%), Postives = 123/141 (87.23%), Query Frame = 0

Query: 1   MRKMQNNKAGFREGVRVLRRPNGNYSPRVINKKFMAETKRIHPYDLVEPMQYFFIRIVKA 60
           MRKMQNN+AGF EG RVLRRPNG+Y+PRVINKKFMAET+RIHPYDLVEPM Y FIRI KA
Sbjct: 302 MRKMQNNRAGFGEGARVLRRPNGDYAPRVINKKFMAETERIHPYDLVEPMHYLFIRIEKA 361

Query: 61  RNVASNESPYLQIRTSGRFKNLKPASHRPGEPTDLSEWNQVFALRHNRPDTTNTTLEITV 120
           RNVA NESPY +IRTSG FK   PASHRPGEPTD  EWNQVFALRHN+ DT N TLEI+V
Sbjct: 362 RNVAPNESPYFKIRTSGHFKKSNPASHRPGEPTDSPEWNQVFALRHNKSDTANRTLEISV 421

Query: 121 WDTPSEQFLGGVCFGLSDVPV 142
           WDTPSE FLGGVCF LSDVPV
Sbjct: 422 WDTPSEHFLGGVCFDLSDVPV 442

BLAST of Lag0005631 vs. NCBI nr
Match: KAG6573016.1 (Protein QUIRKY, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243.8 bits (621), Expect = 1.1e-60
Identity = 116/141 (82.27%), Postives = 123/141 (87.23%), Query Frame = 0

Query: 1   MRKMQNNKAGFREGVRVLRRPNGNYSPRVINKKFMAETKRIHPYDLVEPMQYFFIRIVKA 60
           MRKMQNN+AGF EG RVLRRPNG+Y+PRVINKKFMAET+RIHPYDLVEPM Y FIRI KA
Sbjct: 294 MRKMQNNRAGFGEGARVLRRPNGDYAPRVINKKFMAETERIHPYDLVEPMHYLFIRIEKA 353

Query: 61  RNVASNESPYLQIRTSGRFKNLKPASHRPGEPTDLSEWNQVFALRHNRPDTTNTTLEITV 120
           RNVA NESPY +I TSG FK   PASHRPGEPTD  EWNQVFALRHN+ DT N TLEI+V
Sbjct: 354 RNVAPNESPYFKICTSGHFKKSNPASHRPGEPTDSPEWNQVFALRHNKSDTANRTLEISV 413

Query: 121 WDTPSEQFLGGVCFGLSDVPV 142
           WDTPSEQFLGGVCF LSDVPV
Sbjct: 414 WDTPSEQFLGGVCFDLSDVPV 434

BLAST of Lag0005631 vs. ExPASy Swiss-Prot
Match: B8XCH5 (Protein QUIRKY OS=Arabidopsis thaliana OX=3702 GN=QKY PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.3e-39
Identity = 86/149 (57.72%), Postives = 102/149 (68.46%), Query Frame = 0

Query: 1   MRKMQNNKAGFREGVRVLRR-PNGNYSPRVINKK-----FMAETKRIHPYDLVEPMQYFF 60
           +RKMQ  +    + +RV +R PNG+YSPRVIN K        E K  HPY+LVEPMQY F
Sbjct: 279 VRKMQVGRPPGGDRIRVTKRPPNGDYSPRVINSKTGGGETTMEKKTHHPYNLVEPMQYLF 338

Query: 61  IRIVKARNVASNESPYLQIRTSGRFKNLKPASHRPGEPTDLSEWNQVFALRHNRPDT--T 120
           +RIVKAR +  NES Y+++RTS  F   KPA +RPGE  D  EWNQVFAL HNR D+  T
Sbjct: 339 VRIVKARGLPPNESAYVKVRTSNHFVRSKPAVNRPGESVDSPEWNQVFALGHNRSDSAVT 398

Query: 121 NTTLEITVWDTPSEQFLGGVCFGLSDVPV 142
             TLEI+ WD  SE FLGGVCF LS+VPV
Sbjct: 399 GATLEISAWDASSESFLGGVCFDLSEVPV 427

BLAST of Lag0005631 vs. ExPASy Swiss-Prot
Match: Q60EW9 (FT-interacting protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=FTIP7 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.8e-08
Identity = 34/102 (33.33%), Postives = 55/102 (53.92%), Query Frame = 0

Query: 44  YDLVEPMQYFFIRIVKARNVASNE-----SPYLQIRTSGRFKNLKPASHRPGEPTDLSEW 103
           YDLVE MQY ++R+VKA+++ S +      PY++++  G +K       +   P    EW
Sbjct: 33  YDLVEQMQYLYVRVVKAKDLPSKDITGSCDPYVEVKL-GNYKGTTRHFEKKTNP----EW 92

Query: 104 NQVFALRHNRPDTTNTTLEITVWDTPSEQFLGGVCFGLSDVP 141
           NQVFA    R  ++   + +   D   + F+G V F L++VP
Sbjct: 93  NQVFAFSKERIQSSVVEIIVKDKDFVKDDFIGRVLFDLNEVP 129

BLAST of Lag0005631 vs. ExPASy Swiss-Prot
Match: Q9M2R0 (FT-interacting protein 3 OS=Arabidopsis thaliana OX=3702 GN=FTIP3 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.4e-07
Identity = 32/102 (31.37%), Postives = 51/102 (50.00%), Query Frame = 0

Query: 44  YDLVEPMQYFFIRIVKARNVASNE-----SPYLQIRTSGRFKNLKPASHRPGEPTDLSEW 103
           YDLVE MQY ++R+VKA+ +   +      PY++++  G +K       +   P    EW
Sbjct: 32  YDLVEQMQYLYVRVVKAKELPGKDMTGSCDPYVEVKL-GNYKGTTRHFEKKSNP----EW 91

Query: 104 NQVFALRHNRPDTTNTTLEITVWDTPSEQFLGGVCFGLSDVP 141
           NQVFA   +R   +     +   D   +  +G V F L++VP
Sbjct: 92  NQVFAFSKDRIQASFLEATVKDKDFVKDDLIGRVVFDLNEVP 128

BLAST of Lag0005631 vs. ExPASy Swiss-Prot
Match: Q9C8H3 (FT-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=FTIP4 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.4e-07
Identity = 30/102 (29.41%), Postives = 51/102 (50.00%), Query Frame = 0

Query: 44  YDLVEPMQYFFIRIVKARNVASNE-----SPYLQIRTSGRFKNLKPASHRPGEPTDLSEW 103
           YDLVE MQY ++R+VKA+ +   +      PY++++  G ++       +   P    EW
Sbjct: 32  YDLVEQMQYLYVRVVKAKELPGKDLTGSCDPYVEVKL-GNYRGTTRHFEKKSNP----EW 91

Query: 104 NQVFALRHNRPDTTNTTLEITVWDTPSEQFLGGVCFGLSDVP 141
           NQVFA   +R   +     +   D   +  +G V F L+++P
Sbjct: 92  NQVFAFSKDRVQASYLEATVKDKDLVKDDLIGRVVFDLNEIP 128

BLAST of Lag0005631 vs. ExPASy Swiss-Prot
Match: Q9FL59 (FT-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=FTIP1 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.7e-07
Identity = 35/105 (33.33%), Postives = 58/105 (55.24%), Query Frame = 0

Query: 44  YDLVEPMQYFFIRIVKARN-----VASNESPYLQIRTSGRFKNLKPASHRPGEPTDLSEW 103
           YDLVE M Y ++R+VKA++     V SN  PY++++  G +K       +   P    EW
Sbjct: 47  YDLVEQMFYLYVRVVKAKDLPPNPVTSNCDPYVEVKI-GNYKGKTKHFEKRTNP----EW 106

Query: 104 NQVFALRHNRPDTTNTTLEITVWD---TPSEQFLGGVCFGLSDVP 141
           NQVFA   ++    ++T+E+ V D      ++++G V F + +VP
Sbjct: 107 NQVFAF--SKDKVQSSTVEVFVRDKEMVTRDEYIGKVVFDMREVP 144

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023541423.11.3e-6182.98protein QUIRKY-like [Cucurbita pepo subsp. pepo] >XP_023541424.1 protein QUIRKY-... [more]
XP_022954974.11.3e-6182.98protein QUIRKY-like [Cucurbita moschata] >XP_022954975.1 protein QUIRKY-like [Cu... [more]
KAG7012203.11.3e-6182.98Protein QUIRKY, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022994561.15.1e-6182.27protein QUIRKY-like [Cucurbita maxima] >XP_022994562.1 protein QUIRKY-like [Cucu... [more]
KAG6573016.11.1e-6082.27Protein QUIRKY, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
B8XCH54.3e-3957.72Protein QUIRKY OS=Arabidopsis thaliana OX=3702 GN=QKY PE=2 SV=1[more]
Q60EW91.8e-0833.33FT-interacting protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=FTIP7 PE=1 ... [more]
Q9M2R03.4e-0731.37FT-interacting protein 3 OS=Arabidopsis thaliana OX=3702 GN=FTIP3 PE=1 SV=1[more]
Q9C8H34.4e-0729.41FT-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=FTIP4 PE=1 SV=1[more]
Q9FL595.7e-0733.33FT-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=FTIP1 PE=1 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 42..157
e-value: 9.0E-7
score: 30.8
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 45..156
NoneNo IPR availablePANTHERPTHR31425PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1coord: 12..141
NoneNo IPR availablePANTHERPTHR31425:SF16BNAA10G16860D PROTEINcoord: 12..141

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0005631.1Lag0005631.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane