Lag0005610 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0005610
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Locationchr6: 23745317 .. 23746408 (+)
RNA-Seq ExpressionLag0005610
SyntenyLag0005610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATTATGAGAAAAAGGGACTTCCTGAACGAGAAAGGATTCTCAAGCAGAGCAGGGAAATTCGTGTCCAAGGTTATTACTCAGTATAAATGGCAAGAGTTCTGCGCTCACCTTCAACAGGCCATGGTGCCTCTTGTTCGAGAATTCTATGCTGGTTTGAGGGAAGAAAGCACGAGCATGACGATGGTAAGAGGGAGAATAGTGAGTTTCTCTTCAGTTGACATTAATAGGGTATATCAGATCAAAGCTCCTTTGAATCTGAGAGAAAACGATGCCATCAAGAACCCTTCAGCCAAGCAGTTGAAAGAAGCTTTGAAGATGGTGGCCAGGAAAGGAGTTCAACGGAAGGAATCACAGACCAAAGTGAAGACACTAGTGCCAAGTGATTTTAAGCCAAAACCGGCAGTGTGGCTTCACTTCATCAAAAACAGACTGATGCCCACAACCCACGATAGTACCATTTCAGTAGAGAGGGTTATGCTTCTCTACAGCATCATGAAGGGGTTGGATATCAACATAGGGAGCATCATCAGAGAAGATATCCTTTCATGTGGGAGAAAGAGAGCTTGGAAGCTATTTTTTGGGTCCCTCATAACCCAACTTTGTTAGAGGGTAAAAATTATTCCTCGAAAAGATGAGCAATATTAGTTTTTCAGGCCCACTATTGACTTGCCTCTTATAGGGAAGCTTCAGCAAAACAATGCGCAGAGAAAGGATAAGGCTTCCACATCCCAGGCTACTCCATCTCCGGGGCTGACTCCTACTTCACCTCCTTAGCACACTCCTGTTTCAGGGCCTACACCATCATCAGAGGCCCTTGCATTTGCCTTCTGACATCTGGACCGGATTGAAGATAAGCTGAAAACATATTGGGTCTATGCGAAGGAAAGAGATGAAGCAATTAGAGAGTTCTATCTCTCTATCACCCCAAGCATCGCTCCTGTTTTCCTTGACTTCCCTCAAGCCTTGCTGCCTCAAGAAGAAAAGAATCTGAAGATGAAAATGAAGATGAAGATGAAGAAGATGAAGAGAATTCCTCGGATGAGGAAAAGGGGAGTTTTCATATCCCCTTTTACAAGTTTTCTATGA

mRNA sequence

ATGGAGATTATGAGAAAAAGGGACTTCCTGAACGAGAAAGGATTCTCAAGCAGAGCAGGGAAATTCGTGTCCAAGGTTATTACTCAGTATAAATGGCAAGAGTTCTGCGCTCACCTTCAACAGGCCATGGTGCCTCTTGTTCGAGAATTCTATGCTGGTTTGAGGGAAGAAAGCACGAGCATGACGATGGTAAGAGGGAGAATAGTGAGTTTCTCTTCAGTTGACATTAATAGGGTATATCAGATCAAAGCTCCTTTGAATCTGAGAGAAAACGATGCCATCAAGAACCCTTCAGCCAAGCAGTTGAAAGAAGCTTTGAAGATGGTGGCCAGGAAAGGAGTTCAACGGAAGGAATCACAGACCAAAGTGAAGACACTAGTGCCAAGTGATTTTAAGCCAAAACCGGCAGTGTGGCTTCACTTCATCAAAAACAGACTGATGCCCACAACCCACGATAGTACCATTTCAGTAGAGAGGGTTATGCTTCTCTACAGCATCATGAAGGGGTTGGATATCAACATAGGGAGCATCATCAGAGAAGATATCCTTTCATATAAGCTGAAAACATATTGGGTCTATGCGAAGGAAAGAGATGAAGCAATTAGAGAGTTCTATCTCTCTATCACCCCAAGCATCGCTCCTGTTTTCCTTGACTTCCCTCAAGCCTTGCTGCCTCAAGAAGAAAAGAATCTGAAGATGAAAATGAAGATGAAGATGAAGAAGATGAAGAGAATTCCTCGGATGAGGAAAAGGGGAGTTTTCATATCCCCTTTTACAAGTTTTCTATGA

Coding sequence (CDS)

ATGGAGATTATGAGAAAAAGGGACTTCCTGAACGAGAAAGGATTCTCAAGCAGAGCAGGGAAATTCGTGTCCAAGGTTATTACTCAGTATAAATGGCAAGAGTTCTGCGCTCACCTTCAACAGGCCATGGTGCCTCTTGTTCGAGAATTCTATGCTGGTTTGAGGGAAGAAAGCACGAGCATGACGATGGTAAGAGGGAGAATAGTGAGTTTCTCTTCAGTTGACATTAATAGGGTATATCAGATCAAAGCTCCTTTGAATCTGAGAGAAAACGATGCCATCAAGAACCCTTCAGCCAAGCAGTTGAAAGAAGCTTTGAAGATGGTGGCCAGGAAAGGAGTTCAACGGAAGGAATCACAGACCAAAGTGAAGACACTAGTGCCAAGTGATTTTAAGCCAAAACCGGCAGTGTGGCTTCACTTCATCAAAAACAGACTGATGCCCACAACCCACGATAGTACCATTTCAGTAGAGAGGGTTATGCTTCTCTACAGCATCATGAAGGGGTTGGATATCAACATAGGGAGCATCATCAGAGAAGATATCCTTTCATATAAGCTGAAAACATATTGGGTCTATGCGAAGGAAAGAGATGAAGCAATTAGAGAGTTCTATCTCTCTATCACCCCAAGCATCGCTCCTGTTTTCCTTGACTTCCCTCAAGCCTTGCTGCCTCAAGAAGAAAAGAATCTGAAGATGAAAATGAAGATGAAGATGAAGAAGATGAAGAGAATTCCTCGGATGAGGAAAAGGGGAGTTTTCATATCCCCTTTTACAAGTTTTCTATGA

Protein sequence

MEIMRKRDFLNEKGFSSRAGKFVSKVITQYKWQEFCAHLQQAMVPLVREFYAGLREESTSMTMVRGRIVSFSSVDINRVYQIKAPLNLRENDAIKNPSAKQLKEALKMVARKGVQRKESQTKVKTLVPSDFKPKPAVWLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLDINIGSIIREDILSYKLKTYWVYAKERDEAIREFYLSITPSIAPVFLDFPQALLPQEEKNLKMKMKMKMKKMKRIPRMRKRGVFISPFTSFL
Homology
BLAST of Lag0005610 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 122.9 bits (307), Expect = 4.2e-24
Identity = 71/185 (38.38%), Postives = 110/185 (59.46%), Query Frame = 0

Query: 4   MRKRDFLNEKGF----SSRAGK--FVSKVITQYKWQEFCAHLQQAMVPLVREFYAGLREE 63
           ++ R    EKGF    S   G+  F+++VITQ+ W++FCAH +  +VPLVREFYA L + 
Sbjct: 38  IQNRPLNAEKGFVLDNSETMGQLPFIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDP 97

Query: 64  STSMTMVRGRIVSFSSVDINRVYQIKAPLNLRENDAIKNPSAKQLKEALKMVARKGVQRK 123
             +   VRG  VS+S   IN V+ +  P++   ++ I+N + + L   L+ VA  G +  
Sbjct: 98  EENTVYVRGVQVSWSEEAINAVFGLGDPVD-EHSEFIQNITQQDLITVLETVAAAGAEWN 157

Query: 124 ESQTKVKTLVPSDFKPKPAVWLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLDINIGSI 183
            S     T + S   P   VW HF+K+RL+PTTH  T+S +R++LL+S++ G  IN+G +
Sbjct: 158 VSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRM 217

BLAST of Lag0005610 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 119.0 bits (297), Expect = 6.1e-23
Identity = 70/185 (37.84%), Postives = 108/185 (58.38%), Query Frame = 0

Query: 4   MRKRDFLNEKGF----SSRAGK--FVSKVITQYKWQEFCAHLQQAMVPLVREFYAGLREE 63
           ++ R    EKGF    S   G+  F+++VITQ+ W++FCAH +  +VPLVREFYA L + 
Sbjct: 29  IQNRPLNAEKGFVLDNSETMGQLPFIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDP 88

Query: 64  STSMTMVRGRIVSFSSVDINRVYQIKAPLNLRENDAIKNPSAKQLKEALKMVARKGVQRK 123
             +   VRG  VS+S   IN V+ +  P++   ++ I+N +   L   L+ VA  G +  
Sbjct: 89  VENTVYVRGVQVSWSEEAINAVFGLGDPVD-EHSEFIENITEHDLITVLETVAVAGAEWN 148

Query: 124 ESQTKVKTLVPSDFKPKPAVWLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLDINIGSI 183
            S     T + S   P   VW HF+K+ L+PTTH  T+S +R++LL+S++ G  IN+G +
Sbjct: 149 VSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRM 208

BLAST of Lag0005610 vs. NCBI nr
Match: PON70375.1 (hypothetical protein PanWU01x14_080440 [Parasponia andersonii])

HSP 1 Score: 110.5 bits (275), Expect = 2.2e-20
Identity = 59/161 (36.65%), Postives = 90/161 (55.90%), Query Frame = 0

Query: 22  FVSKVITQYKWQEFCAHLQQAMVPLVREFYAGLREESTSMTMVRGRIVSFSSVDINRVYQ 81
           F++ VI Q+ WQ FCAH +  +VPLVREFY  +         +RG  V  S   IN ++ 
Sbjct: 83  FIADVIIQHNWQLFCAHPEDPIVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTIFS 142

Query: 82  IKAPLNLRENDAIKNPSAKQLKEALKMVARKGVQRKESQTKVKTLVPSDFKPKPAVWLHF 141
           +  P++   ++ +++ +  +L   L+ VA  G +   S     T + S   P   VW HF
Sbjct: 143 LGDPID-EHSEFVEDITKPELVIVLETVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYHF 202

Query: 142 IKNRLMPTTHDSTISVERVMLLYSIMKGLDINIGSIIREDI 183
           +K+RL+PTTH  T+S E V LLYS++ G  IN+G +I  +I
Sbjct: 203 LKSRLLPTTHGKTVSKEHVSLLYSMLTGKSINVGRMIHREI 242

BLAST of Lag0005610 vs. NCBI nr
Match: PON46588.1 (hypothetical protein TorRG33x02_325580, partial [Trema orientale])

HSP 1 Score: 97.8 bits (242), Expect = 1.4e-16
Identity = 56/164 (34.15%), Postives = 89/164 (54.27%), Query Frame = 0

Query: 22  FVSKVITQYKWQEFCAHLQQAMVPLVREFYAGLREESTSMTMVRGRIVSFSSVDINRVYQ 81
           F++ VI Q+  + FCAH +  +VPLVREFYA L +       V G  V  S   IN ++ 
Sbjct: 65  FIADVIAQHNLRLFCAHPEDPIVPLVREFYANLTDPEEDTVYVGGVQVPLSEKAINAIFG 124

Query: 82  IKAPLNLRENDAIKNPSAKQLKEALKMVARKGVQRKESQTKVKTLVPSDFKPKPAVWLHF 141
           +  P++   ++ ++  +  +L   LK VA    +   S     T + S       +W HF
Sbjct: 125 LGDPVD-EHSEFVEAITELELLTVLKTVAVARAESNVSSHSAYTCIRSSLNQAAKIWYHF 184

Query: 142 IKNRLMPTTHDSTISVERVMLLYSIMKGLDINIGSIIREDILSY 186
           +++RL+PTTH   +S   V+LLYSI+ G  IN+G II ++I ++
Sbjct: 185 LESRLLPTTHGKIVSKYCVLLLYSILTGKSINVGRIIYDEIYTH 227

BLAST of Lag0005610 vs. NCBI nr
Match: EXB53755.1 (hypothetical protein L484_022412 [Morus notabilis])

HSP 1 Score: 97.1 bits (240), Expect = 2.5e-16
Identity = 54/161 (33.54%), Postives = 91/161 (56.52%), Query Frame = 0

Query: 22  FVSKVITQYKWQEFCAHLQQAMVPLVREFYAGLREESTSMTMVRGRIVSFSSVDINRVYQ 81
           F+++VI Q+ W++FC H    +VPLVREFYA L + +     V+   V F++  IN ++ 
Sbjct: 6   FITRVIHQHGWRQFCQHPSNPIVPLVREFYANLLDFNQETVFVQNVKVPFTARAINSIFG 65

Query: 82  IKAPLNLRENDAIKNPSAKQLKEALKMVARKGVQRKESQTKVKTLVPSDFKPKPAVWLHF 141
           ++  ++    D     + +QL+  L  VA +G   + S     T +  + K    +W HF
Sbjct: 66  LEEVVD-EYVDFASEVTDEQLEVVLAEVAIEGATWQISPQGAYTCIRKELKRHAQIWYHF 125

Query: 142 IKNRLMPTTHDSTISVERVMLLYSIMKGLDINIGSIIREDI 183
           +  R MP+TH  T++ +RV+LLYSI+ G+ +NI  I  ++I
Sbjct: 126 LTARFMPSTHGKTVAKDRVLLLYSILTGISVNIEEITIKEI 165

BLAST of Lag0005610 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.0e-24
Identity = 71/185 (38.38%), Postives = 110/185 (59.46%), Query Frame = 0

Query: 4   MRKRDFLNEKGF----SSRAGK--FVSKVITQYKWQEFCAHLQQAMVPLVREFYAGLREE 63
           ++ R    EKGF    S   G+  F+++VITQ+ W++FCAH +  +VPLVREFYA L + 
Sbjct: 38  IQNRPLNAEKGFVLDNSETMGQLPFIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDP 97

Query: 64  STSMTMVRGRIVSFSSVDINRVYQIKAPLNLRENDAIKNPSAKQLKEALKMVARKGVQRK 123
             +   VRG  VS+S   IN V+ +  P++   ++ I+N + + L   L+ VA  G +  
Sbjct: 98  EENTVYVRGVQVSWSEEAINAVFGLGDPVD-EHSEFIQNITQQDLITVLETVAAAGAEWN 157

Query: 124 ESQTKVKTLVPSDFKPKPAVWLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLDINIGSI 183
            S     T + S   P   VW HF+K+RL+PTTH  T+S +R++LL+S++ G  IN+G +
Sbjct: 158 VSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRM 217

BLAST of Lag0005610 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.9e-23
Identity = 70/185 (37.84%), Postives = 108/185 (58.38%), Query Frame = 0

Query: 4   MRKRDFLNEKGF----SSRAGK--FVSKVITQYKWQEFCAHLQQAMVPLVREFYAGLREE 63
           ++ R    EKGF    S   G+  F+++VITQ+ W++FCAH +  +VPLVREFYA L + 
Sbjct: 29  IQNRPLNAEKGFVLDNSETMGQLPFIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDP 88

Query: 64  STSMTMVRGRIVSFSSVDINRVYQIKAPLNLRENDAIKNPSAKQLKEALKMVARKGVQRK 123
             +   VRG  VS+S   IN V+ +  P++   ++ I+N +   L   L+ VA  G +  
Sbjct: 89  VENTVYVRGVQVSWSEEAINAVFGLGDPVD-EHSEFIENITEHDLITVLETVAVAGAEWN 148

Query: 124 ESQTKVKTLVPSDFKPKPAVWLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLDINIGSI 183
            S     T + S   P   VW HF+K+ L+PTTH  T+S +R++LL+S++ G  IN+G +
Sbjct: 149 VSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRM 208

BLAST of Lag0005610 vs. ExPASy TrEMBL
Match: A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.0e-20
Identity = 59/161 (36.65%), Postives = 90/161 (55.90%), Query Frame = 0

Query: 22  FVSKVITQYKWQEFCAHLQQAMVPLVREFYAGLREESTSMTMVRGRIVSFSSVDINRVYQ 81
           F++ VI Q+ WQ FCAH +  +VPLVREFY  +         +RG  V  S   IN ++ 
Sbjct: 83  FIADVIIQHNWQLFCAHPEDPIVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTIFS 142

Query: 82  IKAPLNLRENDAIKNPSAKQLKEALKMVARKGVQRKESQTKVKTLVPSDFKPKPAVWLHF 141
           +  P++   ++ +++ +  +L   L+ VA  G +   S     T + S   P   VW HF
Sbjct: 143 LGDPID-EHSEFVEDITKPELVIVLETVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYHF 202

Query: 142 IKNRLMPTTHDSTISVERVMLLYSIMKGLDINIGSIIREDI 183
           +K+RL+PTTH  T+S E V LLYS++ G  IN+G +I  +I
Sbjct: 203 LKSRLLPTTHGKTVSKEHVSLLYSMLTGKSINVGRMIHREI 242

BLAST of Lag0005610 vs. ExPASy TrEMBL
Match: A0A2P5BCT7 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_325580 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.0e-17
Identity = 56/164 (34.15%), Postives = 89/164 (54.27%), Query Frame = 0

Query: 22  FVSKVITQYKWQEFCAHLQQAMVPLVREFYAGLREESTSMTMVRGRIVSFSSVDINRVYQ 81
           F++ VI Q+  + FCAH +  +VPLVREFYA L +       V G  V  S   IN ++ 
Sbjct: 65  FIADVIAQHNLRLFCAHPEDPIVPLVREFYANLTDPEEDTVYVGGVQVPLSEKAINAIFG 124

Query: 82  IKAPLNLRENDAIKNPSAKQLKEALKMVARKGVQRKESQTKVKTLVPSDFKPKPAVWLHF 141
           +  P++   ++ ++  +  +L   LK VA    +   S     T + S       +W HF
Sbjct: 125 LGDPVD-EHSEFVEAITELELLTVLKTVAVARAESNVSSHSAYTCIRSSLNQAAKIWYHF 184

Query: 142 IKNRLMPTTHDSTISVERVMLLYSIMKGLDINIGSIIREDILSY 186
           +++RL+PTTH   +S   V+LLYSI+ G  IN+G II ++I ++
Sbjct: 185 LESRLLPTTHGKIVSKYCVLLLYSILTGKSINVGRIIYDEIYTH 227

BLAST of Lag0005610 vs. ExPASy TrEMBL
Match: W9QTD9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.2e-16
Identity = 54/161 (33.54%), Postives = 91/161 (56.52%), Query Frame = 0

Query: 22  FVSKVITQYKWQEFCAHLQQAMVPLVREFYAGLREESTSMTMVRGRIVSFSSVDINRVYQ 81
           F+++VI Q+ W++FC H    +VPLVREFYA L + +     V+   V F++  IN ++ 
Sbjct: 6   FITRVIHQHGWRQFCQHPSNPIVPLVREFYANLLDFNQETVFVQNVKVPFTARAINSIFG 65

Query: 82  IKAPLNLRENDAIKNPSAKQLKEALKMVARKGVQRKESQTKVKTLVPSDFKPKPAVWLHF 141
           ++  ++    D     + +QL+  L  VA +G   + S     T +  + K    +W HF
Sbjct: 66  LEEVVD-EYVDFASEVTDEQLEVVLAEVAIEGATWQISPQGAYTCIRKELKRHAQIWYHF 125

Query: 142 IKNRLMPTTHDSTISVERVMLLYSIMKGLDINIGSIIREDI 183
           +  R MP+TH  T++ +RV+LLYSI+ G+ +NI  I  ++I
Sbjct: 126 LTARFMPSTHGKTVAKDRVLLLYSILTGISVNIEEITIKEI 165

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON46472.14.2e-2438.38hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
PON35554.16.1e-2337.84hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii][more]
PON70375.12.2e-2036.65hypothetical protein PanWU01x14_080440 [Parasponia andersonii][more]
PON46588.11.4e-1634.15hypothetical protein TorRG33x02_325580, partial [Trema orientale][more]
EXB53755.12.5e-1633.54hypothetical protein L484_022412 [Morus notabilis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5BCG42.0e-2438.38Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5AGA52.9e-2337.84Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5DAQ21.0e-2036.65Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE... [more]
A0A2P5BCT77.0e-1734.15Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_325... [more]
W9QTD91.2e-1633.54Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0005610.1Lag0005610.1mRNA