Lag0005543 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0005543
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	AA_kinase domain-containing protein
Location	chr6: 21271955 .. 21272689 (+)
RNA-Seq Expression	Lag0005543
Synteny	Lag0005543

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCGGAGCGGAGGTGGTGAGATTTAGAACCACCGACTTGTTCGTAGATTACAAGGCTTGGCACACTTTTCTCTATGCCAAGTTGATGCCTTTGGCGCATCTCAGCAATGTGACAAAGAGTCACGTCGTCCTCTTATTCGCCATCGCCACAGGTCACTTAGTGAACGTTGGGCAGGTCATTCATGAGTCCATGCGCCACATTTTTCGGCGTAACACGACAGTGGGGCTCGGGCATCCATCATTGATCACTGCCCTCTGTCGAGCCGCTGGTGTCGTTTGGGACGCCCAGAAGGAGTTAGTCCACCCCGAAGCGATAATAGACAAGAACTTCATCAGTCGATACCGAGGGCCTAGACAACAGGGTGTACAGCCAGCTCTCCCCATTCCTTTACCGCCAGAGCATCCTGAGCAGCCTGCTGAGCCCGAGCATCAGGAGCAGGAGGTTCCACCTCCCACAGTCGAGGAGTAGTTGCAGTAGCTGCGCATGGAGTTCCAGAGTCACCGGCTGGAGTTCCAGACTCACCAGCTTGAGTTCTTGAGTCATCGACTGGAGCTCTAGAGTCAGCAGCGTGATTACCAGAGAGAGCTGTGCAGGGATCGACGTCACTTCCTCTACACCACGAGCATGTATGCACACTCTTATCAGTGTCAGGTGGCTTCTAGTACGGGTCAGCCTTTGCCACCACCTTTACCATCGTACGAGCCTCCTGAGGACGAGGATGAGGACGAGTGA

mRNA sequence

ATGACCGGAGCGGAGGTGGTGAGATTTAGAACCACCGACTTGTTCGTAGATTACAAGGCTTGGCACACTTTTCTCTATGCCAAGTTGATGCCTTTGGCGCATCTCAGCAATGTGACAAAGAGTCACGTCGTCCTCTTATTCGCCATCGCCACAGGTCACTTAGTGAACGTTGGGCAGGTCATTCATGAGTCCATGCGCCACATTTTTCGGCGTAACACGACAGTGGGGCTCGGGCATCCATCATTGATCACTGCCCTCTGTCGAGCCGCTGGTGTCGTTTGGGACGCCCAGAAGGAGTTAGTCCACCCCGAAGCGATAATAGACAAGAACTTCATCAGTCGATACCGAGGGCCTAGACAACAGGGTGTACAGCCAGCTCTCCCCATTCCTTTACCGCCAGAGCATCCTGAGCAGCCTGCTGAGCCCGAGCATCAGGAGCAGGAGAGTCAGCAGCGTGATTACCAGAGAGAGCTGTGCAGGGATCGACGTCACTTCCTCTACACCACGAGCATGTATGCACACTCTTATCAGTGTCAGGTGGCTTCTAGTACGGGTCAGCCTTTGCCACCACCTTTACCATCGTACGAGCCTCCTGAGGACGAGGATGAGGACGAGTGA

Coding sequence (CDS)

ATGACCGGAGCGGAGGTGGTGAGATTTAGAACCACCGACTTGTTCGTAGATTACAAGGCTTGGCACACTTTTCTCTATGCCAAGTTGATGCCTTTGGCGCATCTCAGCAATGTGACAAAGAGTCACGTCGTCCTCTTATTCGCCATCGCCACAGGTCACTTAGTGAACGTTGGGCAGGTCATTCATGAGTCCATGCGCCACATTTTTCGGCGTAACACGACAGTGGGGCTCGGGCATCCATCATTGATCACTGCCCTCTGTCGAGCCGCTGGTGTCGTTTGGGACGCCCAGAAGGAGTTAGTCCACCCCGAAGCGATAATAGACAAGAACTTCATCAGTCGATACCGAGGGCCTAGACAACAGGGTGTACAGCCAGCTCTCCCCATTCCTTTACCGCCAGAGCATCCTGAGCAGCCTGCTGAGCCCGAGCATCAGGAGCAGGAGAGTCAGCAGCGTGATTACCAGAGAGAGCTGTGCAGGGATCGACGTCACTTCCTCTACACCACGAGCATGTATGCACACTCTTATCAGTGTCAGGTGGCTTCTAGTACGGGTCAGCCTTTGCCACCACCTTTACCATCGTACGAGCCTCCTGAGGACGAGGATGAGGACGAGTGA

Protein sequence

MTGAEVVRFRTTDLFVDYKAWHTFLYAKLMPLAHLSNVTKSHVVLLFAIATGHLVNVGQVIHESMRHIFRRNTTVGLGHPSLITALCRAAGVVWDAQKELVHPEAIIDKNFISRYRGPRQQGVQPALPIPLPPEHPEQPAEPEHQEQESQQRDYQRELCRDRRHFLYTTSMYAHSYQCQVASSTGQPLPPPLPSYEPPEDEDEDE

Homology

[Close]

BLAST of Lag0005543 vs. NCBI nr
Match: KAA0033353.1 (putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa] >TYJ96637.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa])

HSP 1 Score: 123.2 bits (308), Expect = 2.5e-24
Identity = 59/108 (54.63%), Postives = 82/108 (75.93%), Query Frame = 0


Query: 5   EVVRFRTTDLFVDYKAWHTFLYAKLMPLAHLSNVTKSHVVLLFAIATGHLVNVGQVIHES 64
           E +RF++++L V  + WH F+ AKL+P+AH S+VTK   +LL+AIAT   V+VG+VIH+S
Sbjct: 154 EPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKERAILLYAIATKRSVDVGKVIHKS 213

Query: 65  MRHIFRRNTTVGLGHPSLITALCRAAGVVWDAQKELVHPEAIIDKNFI 113
           + +I +   T GLGH SLITALCR  GVVW+ ++ELV P+ I+DKNFI
Sbjct: 214 LCNIRKSGMTGGLGHSSLITALCRNEGVVWNEKEELVDPKPIMDKNFI 261

[Close]

BLAST of Lag0005543 vs. NCBI nr
Match: XP_008458668.1 (PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo])

HSP 1 Score: 123.2 bits (308), Expect = 2.5e-24
Identity = 59/108 (54.63%), Postives = 82/108 (75.93%), Query Frame = 0


Query: 5   EVVRFRTTDLFVDYKAWHTFLYAKLMPLAHLSNVTKSHVVLLFAIATGHLVNVGQVIHES 64
           E +RF++++L V  + WH F+ AKL+P+AH S+VTK   +LL+AIAT   V+VG+VIH+S
Sbjct: 92  EPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKERAILLYAIATKRSVDVGKVIHKS 151

Query: 65  MRHIFRRNTTVGLGHPSLITALCRAAGVVWDAQKELVHPEAIIDKNFI 113
           + +I +   T GLGH SLITALCR  GVVW+ ++ELV P+ I+DKNFI
Sbjct: 152 LCNIRKSGMTGGLGHSSLITALCRNEGVVWNEKEELVDPKPIMDKNFI 199

[Close]

BLAST of Lag0005543 vs. NCBI nr
Match: KGN46897.1 (hypothetical protein Csa_020731 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 3.6e-23
Identity = 58/113 (51.33%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 5   EVVRFRTTDLFVDYKAWHTFLYAKLMPLAHLSNVTKSHVVLLFAIATGHLVNVGQVIHES 64
           E +RF++++L V  + WH F+ AKL+P+AH S+VTK   +LL+AIAT   V+VG+VI +S
Sbjct: 154 EPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKERAILLYAIATKRSVDVGKVIQKS 213

Query: 65  MRHIFRRNTTVGLGHPSLITALCRAAGVVWDAQKELVHPEAIIDKNFISRYRG 118
           + +I +   T GLGH SLITALCR  GVVW+ ++ELV P+ I+DK+FI    G
Sbjct: 214 LCNIRKSGMTGGLGHSSLITALCRNEGVVWNEKEELVDPKPIMDKSFIMEIPG 266

[Close]

BLAST of Lag0005543 vs. NCBI nr
Match: EOY01634.1 (Uncharacterized protein TCM_011481 [Theobroma cacao])

HSP 1 Score: 89.4 bits (220), Expect = 4.0e-14
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = 0


Query: 7   VRFRTTDLFVDYKAWHTFLYAKLMPLAHLSNVTKSHVVLLFAIATGHLVNVGQVIHESMR 66
           V F+   L   +K W+ FL A+L+P+ H+S +TK   VLL+A+ TG  +NVG++I E++ 
Sbjct: 85  VSFKANALNKFFKVWYHFLTARLLPVKHVSVITKDRAVLLYAMVTGKTINVGKLIFENIL 144

Query: 67  HIFRRNTTVGLGHPSLITALCRAAGVVWDAQKELVHPEAIIDKNFISRYRGPRQQGVQPA 126
           H+   +   G+ +PSLITALC+ A V W + +EL+HP+  +D N ++R    +  G   +
Sbjct: 145 HV-AGSAKEGIWYPSLITALCKQARVQWSSVEELLHPKVPLDANIVNRLYNYQPPGGNSS 204

Query: 127 LPIPLPPEHPEQPAEPEHQEQESQQRDY 155
              P PP        P+  E+   +  Y
Sbjct: 205 -SAPRPPPRATSLTIPQRLERLEHRAAY 230

[Close]

BLAST of Lag0005543 vs. NCBI nr
Match: EOY08722.1 (Uncharacterized protein TCM_023809 [Theobroma cacao])

HSP 1 Score: 88.2 bits (217), Expect = 9.0e-14
Identity = 46/120 (38.33%), Postives = 69/120 (57.50%), Query Frame = 0


Query: 17  DYKAWHTFLYAKLMPLAHLSNVTKSHVVLLFAIATGHLVNVGQVIHESMRHIFRRNTTVG 76
           +YK W+ FL AK++P+ HLS+VTK   +LL+AI  G  +++GQ+I  S+ H   R+   G
Sbjct: 4   EYKVWYHFLKAKMLPIKHLSDVTKDRAMLLYAIILGKSIDIGQLIFNSIVHT-TRSIRDG 63

Query: 77  LGHPSLITALCRAAGVVWDAQKELVHPEAIIDKNFISRYRGPRQQGVQPALPI-PLPPEH 136
           L +PS IT LC+  G+ W + +EL+H    +DK  I R+          +    P PP H
Sbjct: 64  LWYPSFITGLCKQVGLQWTSNEELLHLIVPLDKGIIHRFHTHEHSTTSGSSSFAPRPPLH 122

[Close]

BLAST of Lag0005543 vs. ExPASy TrEMBL
Match: A0A5D3BBY3 (Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26G00020 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-24
Identity = 59/108 (54.63%), Postives = 82/108 (75.93%), Query Frame = 0


Query: 5   EVVRFRTTDLFVDYKAWHTFLYAKLMPLAHLSNVTKSHVVLLFAIATGHLVNVGQVIHES 64
           E +RF++++L V  + WH F+ AKL+P+AH S+VTK   +LL+AIAT   V+VG+VIH+S
Sbjct: 154 EPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKERAILLYAIATKRSVDVGKVIHKS 213

Query: 65  MRHIFRRNTTVGLGHPSLITALCRAAGVVWDAQKELVHPEAIIDKNFI 113
           + +I +   T GLGH SLITALCR  GVVW+ ++ELV P+ I+DKNFI
Sbjct: 214 LCNIRKSGMTGGLGHSSLITALCRNEGVVWNEKEELVDPKPIMDKNFI 261

[Close]

BLAST of Lag0005543 vs. ExPASy TrEMBL
Match: A0A1S3C7Y0 (uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-24
Identity = 59/108 (54.63%), Postives = 82/108 (75.93%), Query Frame = 0


Query: 5   EVVRFRTTDLFVDYKAWHTFLYAKLMPLAHLSNVTKSHVVLLFAIATGHLVNVGQVIHES 64
           E +RF++++L V  + WH F+ AKL+P+AH S+VTK   +LL+AIAT   V+VG+VIH+S
Sbjct: 92  EPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKERAILLYAIATKRSVDVGKVIHKS 151

Query: 65  MRHIFRRNTTVGLGHPSLITALCRAAGVVWDAQKELVHPEAIIDKNFI 113
           + +I +   T GLGH SLITALCR  GVVW+ ++ELV P+ I+DKNFI
Sbjct: 152 LCNIRKSGMTGGLGHSSLITALCRNEGVVWNEKEELVDPKPIMDKNFI 199

[Close]

BLAST of Lag0005543 vs. ExPASy TrEMBL
Match: A0A0A0KER1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.8e-23
Identity = 58/113 (51.33%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 5   EVVRFRTTDLFVDYKAWHTFLYAKLMPLAHLSNVTKSHVVLLFAIATGHLVNVGQVIHES 64
           E +RF++++L V  + WH F+ AKL+P+AH S+VTK   +LL+AIAT   V+VG+VI +S
Sbjct: 154 EPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKERAILLYAIATKRSVDVGKVIQKS 213

Query: 65  MRHIFRRNTTVGLGHPSLITALCRAAGVVWDAQKELVHPEAIIDKNFISRYRG 118
           + +I +   T GLGH SLITALCR  GVVW+ ++ELV P+ I+DK+FI    G
Sbjct: 214 LCNIRKSGMTGGLGHSSLITALCRNEGVVWNEKEELVDPKPIMDKSFIMEIPG 266

[Close]

BLAST of Lag0005543 vs. ExPASy TrEMBL
Match: A0A0A0KNI1 (AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 9.4e-17
Identity = 48/89 (53.93%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 29  LMPLAHLSNVTKSHVVLLFAIATGHLVNVGQVIHESMRHIFRRNTTVGLGHPSLITALCR 88
           L+P+AH S+VTK   +LL+AIAT   V+VG+VI +S+ +I +   T GLGH SLITALCR
Sbjct: 149 LLPMAHTSSVTKERAILLYAIATKRSVDVGKVIQKSLCNIRKSGMTGGLGHSSLITALCR 208

Query: 89  AAGVVWDAQKELVHPEAIIDKNFISRYRG 118
             GVVW+ ++ELV P+ I+DK+FI    G
Sbjct: 209 NEGVVWNEKEELVDPKPIMDKSFIMEIPG 237

[Close]

BLAST of Lag0005543 vs. ExPASy TrEMBL
Match: A0A061EH53 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_011481 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.0e-14
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = 0


Query: 7   VRFRTTDLFVDYKAWHTFLYAKLMPLAHLSNVTKSHVVLLFAIATGHLVNVGQVIHESMR 66
           V F+   L   +K W+ FL A+L+P+ H+S +TK   VLL+A+ TG  +NVG++I E++ 
Sbjct: 85  VSFKANALNKFFKVWYHFLTARLLPVKHVSVITKDRAVLLYAMVTGKTINVGKLIFENIL 144

Query: 67  HIFRRNTTVGLGHPSLITALCRAAGVVWDAQKELVHPEAIIDKNFISRYRGPRQQGVQPA 126
           H+   +   G+ +PSLITALC+ A V W + +EL+HP+  +D N ++R    +  G   +
Sbjct: 145 HV-AGSAKEGIWYPSLITALCKQARVQWSSVEELLHPKVPLDANIVNRLYNYQPPGGNSS 204

Query: 127 LPIPLPPEHPEQPAEPEHQEQESQQRDY 155
              P PP        P+  E+   +  Y
Sbjct: 205 -SAPRPPPRATSLTIPQRLERLEHRAAY 230

The following BLAST results are available for this feature:

BLAST of Lag0005543 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033353.1	2.5e-24	54.63	putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]...	[more]
XP_008458668.1	2.5e-24	54.63	PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo]	[more]
KGN46897.1	3.6e-23	51.33	hypothetical protein Csa_020731 [Cucumis sativus]	[more]
EOY01634.1	4.0e-14	35.14	Uncharacterized protein TCM_011481 [Theobroma cacao]	[more]
EOY08722.1	9.0e-14	38.33	Uncharacterized protein TCM_023809 [Theobroma cacao]	[more]

BLAST of Lag0005543 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0005543 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BBY3	1.2e-24	54.63	Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuw...	[more]
A0A1S3C7Y0	1.2e-24	54.63	uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=...	[more]
A0A0A0KER1	1.8e-23	51.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1	[more]
A0A0A0KNI1	9.4e-17	53.93	AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 P...	[more]
A0A061EH53	2.0e-14	35.14	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_011481 PE=4 SV=1	[more]

BLAST of Lag0005543 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0005543.1	Lag0005543.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006561	proline biosynthetic process
cellular_component	GO:0005829	cytosol
molecular_function	GO:0004349	glutamate 5-kinase activity