Lag0005541 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0005541
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionProtein MNN4-like
Locationchr6: 21206832 .. 21207862 (-)
RNA-Seq ExpressionLag0005541
SyntenyLag0005541
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAAAAGTGATTTTCTCAACAAGAAGGGATTCTCTAATAAAGTAGGAGCACGGTCAGAGTTCGTAAGTAGAGTTATCTCACAGTATAAGTCGCAGGAGTTCTGTGCTCACCCTTTGGAGGTAGTGAGGGAGGAAAGCATAAGTATGGCGGTAGTGAGAGGCAAAATGGCCAGCTTCTCTTCAGTGGACATAAACTGGATGTACAGAATCAAAGCATCCTTACATCCAAGAGGGAATGATGTCATTAGGAACCCCTCGACCAAGCAGATGAAAGAAGCACTTAAATTAGTGGCCAACAAGGGAGTTCAATGGAAAGAGTCGCTGACGAAGGTGAAAACACTAGTGCCAAGCGACCTAAAGCCAGAACCGGAAGTGTGGCTTCACTTTCTAAAGAACCGATTGATGCCAACCACCCACGATAGCACTATCTCAGTAGATAGAGTTATGCTCCTCTACTGTATCATGAAAGGGTTGGAGATCAACATCGGTAGCATTATCAGAGAGGAGATTCTAGCTTGTGGAAAAAAAGAGCAGGTAAACTTTTCTTTGGATCACTTATCACCCAGCTTTGTTAGAGGGTGAAGATAGTTCCGCGCAAGGACGAGGAGCGTCATTTTTCAAGCCTACCATTGACCTGTCCTTGATCGGGAAGTTTCAACAAAATAGCCTCCAAAGGAAATACAAAGCCTTCACATCTCAGGCCACTCCACCATCAGGGTTGAACATATCTTTTCAATCCTATCACACTCTTTTTACAGGGCCTCTCACCATCATCTGAAGCCCTAGCCATTGCCTACCGTTAGCTAGATCAAATCAAGGACAACCTGAATACTTATTGGGCATATGCAAAGGAGAGGGATGAAGCCAATAGAGAGTTCATTCTCTCTATCGCCCCAAGTATTGTTCCAGTCTTTCCCGATTTCCCTCAATCACTACTGCCTCAAGAAAAAAAGGATTTTGATGATGGAGAAGATGAAAACGATGATGGAAAAGATGAAGAGAAAGAGAGTTCCTCGGAAGAGGACTAG

mRNA sequence

ATGAGAAAAAGTGATTTTCTCAACAAGAAGGGATTCTCTAATAAAGTAGGAGCACGGTCAGAGTTCGTAAGTAGAGTTATCTCACAGTATAAGTCGCAGGAGTTCTGTGCTCACCCTTTGGAGGTAGTGAGGGAGGAAAGCATAAGTATGGCGGTAGTGAGAGGCAAAATGGCCAGCTTCTCTTCAGTGGACATAAACTGGATGTACAGAATCAAAGCATCCTTACATCCAAGAGGGAATGATGTCATTAGGAACCCCTCGACCAAGCAGATGAAAGAAGCACTTAAATTAGTGGCCAACAAGGGAGTTCAATGGAAAGAGTCGCTGACGAAGGTGAAAACACTAGTGCCAAGCGACCTAAAGCCAGAACCGGAAGTGTGGCTTCACTTTCTAAAGAACCGATTGATGCCAACCACCCACGATAGCACTATCTCAGTAGATAGAGTTATGCTCCTCTACTGTATCATGAAAGGGTTGGAGATCAACATCGGTAGCATTATCAGAGAGGAGATTCTAGCTTGTGGAAAAAAAGAGCAGCTAGATCAAATCAAGGACAACCTGAATACTTATTGGGCATATGCAAAGGAGAGGGATGAAGCCAATAGAGAGTTCATTCTCTCTATCGCCCCAAGTATTGTTCCAGTCTTTCCCGATTTCCCTCAATCACTACTGCCTCAAGAAAAAAAGGATTTTGATGATGGAGAAGATGAAAACGATGATGGAAAAGATGAAGAGAAAGAGAGTTCCTCGGAAGAGGACTAG

Coding sequence (CDS)

ATGAGAAAAAGTGATTTTCTCAACAAGAAGGGATTCTCTAATAAAGTAGGAGCACGGTCAGAGTTCGTAAGTAGAGTTATCTCACAGTATAAGTCGCAGGAGTTCTGTGCTCACCCTTTGGAGGTAGTGAGGGAGGAAAGCATAAGTATGGCGGTAGTGAGAGGCAAAATGGCCAGCTTCTCTTCAGTGGACATAAACTGGATGTACAGAATCAAAGCATCCTTACATCCAAGAGGGAATGATGTCATTAGGAACCCCTCGACCAAGCAGATGAAAGAAGCACTTAAATTAGTGGCCAACAAGGGAGTTCAATGGAAAGAGTCGCTGACGAAGGTGAAAACACTAGTGCCAAGCGACCTAAAGCCAGAACCGGAAGTGTGGCTTCACTTTCTAAAGAACCGATTGATGCCAACCACCCACGATAGCACTATCTCAGTAGATAGAGTTATGCTCCTCTACTGTATCATGAAAGGGTTGGAGATCAACATCGGTAGCATTATCAGAGAGGAGATTCTAGCTTGTGGAAAAAAAGAGCAGCTAGATCAAATCAAGGACAACCTGAATACTTATTGGGCATATGCAAAGGAGAGGGATGAAGCCAATAGAGAGTTCATTCTCTCTATCGCCCCAAGTATTGTTCCAGTCTTTCCCGATTTCCCTCAATCACTACTGCCTCAAGAAAAAAAGGATTTTGATGATGGAGAAGATGAAAACGATGATGGAAAAGATGAAGAGAAAGAGAGTTCCTCGGAAGAGGACTAG

Protein sequence

MRKSDFLNKKGFSNKVGARSEFVSRVISQYKSQEFCAHPLEVVREESISMAVVRGKMASFSSVDINWMYRIKASLHPRGNDVIRNPSTKQMKEALKLVANKGVQWKESLTKVKTLVPSDLKPEPEVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILACGKKEQLDQIKDNLNTYWAYAKERDEANREFILSIAPSIVPVFPDFPQSLLPQEKKDFDDGEDENDDGKDEEKESSSEED
Homology
BLAST of Lag0005541 vs. NCBI nr
Match: XP_038904385.1 (uncharacterized protein LOC120090747 [Benincasa hispida])

HSP 1 Score: 103.6 bits (257), Expect = 2.6e-18
Identity = 47/128 (36.72%), Postives = 80/128 (62.50%), Query Frame = 0

Query: 52  VVRGKMASFSSVDINWMYRIKASLHPRGNDVIRNPSTKQMKEALKLVANKGVQWKESLTK 111
           +++G +  FS+ DIN +Y++K      GN +I +P  ++M++AL+ +   G QW  SL  
Sbjct: 232 IMKGCIVPFSARDINELYKMKDIPDASGNKIIDDPQEEKMEDALRTLTQSGTQWSVSLKG 291

Query: 112 VKTLVPSDLKPEPEVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEI 171
           +KTL  S L PE  +W++ +K R++PT+HD T+S DRVM  YCI  G+ I++  +I  + 
Sbjct: 292 IKTLASSKLLPEARLWVYLVKRRIIPTSHDKTVSRDRVMAAYCIACGILIDVSHLIAAQA 351

Query: 172 LACGKKEQ 180
               +++Q
Sbjct: 352 KEAAQRKQ 359

BLAST of Lag0005541 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-17
Identity = 61/184 (33.15%), Postives = 104/184 (56.52%), Query Frame = 0

Query: 9   KKGF---SNKVGARSEFVSRVISQYKSQEFCAHP----LEVVREESISM-------AVVR 68
           +KGF   +++   +  F+++VI+Q+  ++FCAHP    + +VRE   ++         VR
Sbjct: 46  EKGFVLDNSETMGQLPFIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVR 105

Query: 69  GKMASFSSVDINWMYRIKASLHPRGNDVIRNPSTKQMKEALKLVANKGVQWKESLTKVKT 128
           G   S+S   IN ++ +   +    ++ I+N + + +   L+ VA  G +W  S     T
Sbjct: 106 GVQVSWSEEAINAVFGLGDPVDEH-SEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYT 165

Query: 129 LVPSDLKPEPEVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILAC 179
            + S L P  +VW HFLK+RL+PTTH  T+S DR++LL+ ++ G  IN+G +I  EI AC
Sbjct: 166 CIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRAC 225

BLAST of Lag0005541 vs. NCBI nr
Match: XP_038876674.1 (chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida])

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-17
Identity = 53/150 (35.33%), Postives = 90/150 (60.00%), Query Frame = 0

Query: 31  KSQEFCAHPLEVVRE-------ESISMAVVRGKMASFSSVDINWMYRIKASLHPRGNDVI 90
           KS E  + P  VVR+        +     ++ +  SFS+ DIN +Y++K + +  GN +I
Sbjct: 265 KSIEKSSKPASVVRDFYRGRLHGTRDAVTLKRETVSFSARDINEIYQMKDNPYASGNKII 324

Query: 91  RNPSTKQMKEALKLVANKGVQWKESLTKVKTLVPSDLKPEPEVWLHFLKNRLMPTTHDST 150
            +P+ +QM++AL+++   G++W  SL  V TL    L  E  +W++ +K RL+ TTHD T
Sbjct: 325 DDPTEQQMEDALQVLMQLGMKWSVSLKGVSTLASKSLLLEGRLWVYLVKKRLISTTHDKT 384

Query: 151 ISVDRVMLLYCIMKGLEINIGSIIREEILA 174
           +S DRVM  YCI++ + I++G +I  ++ A
Sbjct: 385 VSRDRVMATYCIVRSIPIDVGQLIARQLRA 414

BLAST of Lag0005541 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-16
Identity = 60/184 (32.61%), Postives = 101/184 (54.89%), Query Frame = 0

Query: 9   KKGF---SNKVGARSEFVSRVISQYKSQEFCAHP----LEVVREESISM-------AVVR 68
           +KGF   +++   +  F+++VI+Q+  ++FCAHP    + +VRE   ++         VR
Sbjct: 37  EKGFVLDNSETMGQLPFIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPVENTVYVR 96

Query: 69  GKMASFSSVDINWMYRIKASLHPRGNDVIRNPSTKQMKEALKLVANKGVQWKESLTKVKT 128
           G   S+S   IN ++ +   +    ++ I N +   +   L+ VA  G +W  S     T
Sbjct: 97  GVQVSWSEEAINAVFGLGDPVDEH-SEFIENITEHDLITVLETVAVAGAEWNVSAQGAYT 156

Query: 129 LVPSDLKPEPEVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILAC 179
            + S L P  +VW HFLK+ L+PTTH  T+S DR++LL+ ++ G  IN+G +I  EI AC
Sbjct: 157 CIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRAC 216

BLAST of Lag0005541 vs. NCBI nr
Match: KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 1.5e-15
Identity = 51/125 (40.80%), Postives = 77/125 (61.60%), Query Frame = 0

Query: 51  AVVRGKMASFSSVDINWMYRIKASL--HPRGNDVIRNPSTKQMKEALKLVANKGVQWKES 110
           A+V+GKM +F    +N +Y ++ +   +P    + + PS   M+ AL+ VA  G++W  +
Sbjct: 184 AIVKGKMVNFGPKVVNVLYGLRQTTVEYP----IFKEPSDIDMQNALERVAWPGMKWDIT 243

Query: 111 LTKVKTLVPSDLKPEPEVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIR 170
             K   L P +LK    VWL F+K  LMPT HD+TIS++R+MLLYCIM+ + +N+  II 
Sbjct: 244 PIKKYQLFPHNLKTTASVWLVFIKKNLMPTRHDNTISLERIMLLYCIMEEIPLNVDEIIY 303

Query: 171 EEILA 174
           E I A
Sbjct: 304 EPIEA 304

BLAST of Lag0005541 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 6.1e-18
Identity = 61/184 (33.15%), Postives = 104/184 (56.52%), Query Frame = 0

Query: 9   KKGF---SNKVGARSEFVSRVISQYKSQEFCAHP----LEVVREESISM-------AVVR 68
           +KGF   +++   +  F+++VI+Q+  ++FCAHP    + +VRE   ++         VR
Sbjct: 46  EKGFVLDNSETMGQLPFIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVR 105

Query: 69  GKMASFSSVDINWMYRIKASLHPRGNDVIRNPSTKQMKEALKLVANKGVQWKESLTKVKT 128
           G   S+S   IN ++ +   +    ++ I+N + + +   L+ VA  G +W  S     T
Sbjct: 106 GVQVSWSEEAINAVFGLGDPVDEH-SEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYT 165

Query: 129 LVPSDLKPEPEVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILAC 179
            + S L P  +VW HFLK+RL+PTTH  T+S DR++LL+ ++ G  IN+G +I  EI AC
Sbjct: 166 CIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRAC 225

BLAST of Lag0005541 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 5.2e-17
Identity = 60/184 (32.61%), Postives = 101/184 (54.89%), Query Frame = 0

Query: 9   KKGF---SNKVGARSEFVSRVISQYKSQEFCAHP----LEVVREESISM-------AVVR 68
           +KGF   +++   +  F+++VI+Q+  ++FCAHP    + +VRE   ++         VR
Sbjct: 37  EKGFVLDNSETMGQLPFIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPVENTVYVR 96

Query: 69  GKMASFSSVDINWMYRIKASLHPRGNDVIRNPSTKQMKEALKLVANKGVQWKESLTKVKT 128
           G   S+S   IN ++ +   +    ++ I N +   +   L+ VA  G +W  S     T
Sbjct: 97  GVQVSWSEEAINAVFGLGDPVDEH-SEFIENITEHDLITVLETVAVAGAEWNVSAQGAYT 156

Query: 129 LVPSDLKPEPEVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILAC 179
            + S L P  +VW HFLK+ L+PTTH  T+S DR++LL+ ++ G  IN+G +I  EI AC
Sbjct: 157 CIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRAC 216

BLAST of Lag0005541 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 7.5e-16
Identity = 51/125 (40.80%), Postives = 77/125 (61.60%), Query Frame = 0

Query: 51  AVVRGKMASFSSVDINWMYRIKASL--HPRGNDVIRNPSTKQMKEALKLVANKGVQWKES 110
           A+V+GKM +F    +N +Y ++ +   +P    + + PS   M+ AL+ VA  G++W  +
Sbjct: 184 AIVKGKMVNFGPKVVNVLYGLRQTTVEYP----IFKEPSDIDMQNALERVAWPGMKWDIT 243

Query: 111 LTKVKTLVPSDLKPEPEVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIR 170
             K   L P +LK    VWL F+K  LMPT HD+TIS++R+MLLYCIM+ + +N+  II 
Sbjct: 244 PIKKYQLFPHNLKTTASVWLVFIKKNLMPTRHDNTISLERIMLLYCIMEEIPLNVDEIIY 303

Query: 171 EEILA 174
           E I A
Sbjct: 304 EPIEA 304

BLAST of Lag0005541 vs. ExPASy TrEMBL
Match: A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.7e-15
Identity = 56/168 (33.33%), Postives = 88/168 (52.38%), Query Frame = 0

Query: 22  FVSRVISQYKSQEFCAHP----LEVVREESISM-------AVVRGKMASFSSVDINWMYR 81
           F++ VI Q+  Q FCAHP    + +VRE   +M         +RG     S   IN ++ 
Sbjct: 83  FIADVIIQHNWQLFCAHPEDPIVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTIFS 142

Query: 82  IKASLHPRGNDVIRNPSTKQMKEALKLVANKGVQWKESLTKVKTLVPSDLKPEPEVWLHF 141
           +   +    ++ + + +  ++   L+ VA  G +W  S     T + S L P  +VW HF
Sbjct: 143 LGDPIDEH-SEFVEDITKPELVIVLETVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYHF 202

Query: 142 LKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILACGKKE 179
           LK+RL+PTTH  T+S + V LLY ++ G  IN+G +I  EI AC  ++
Sbjct: 203 LKSRLLPTTHGKTVSKEHVSLLYSMLTGKSINVGRMIHREICACAARK 249

BLAST of Lag0005541 vs. ExPASy TrEMBL
Match: A0A6J1DMT3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia OX=3673 GN=LOC111022007 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.1e-14
Identity = 39/100 (39.00%), Postives = 67/100 (67.00%), Query Frame = 0

Query: 78   RGNDVIRNPSTKQMKEALKLVANKGVQWKESLTKVKTLVPSDLKPEPEVWLHFLKNRLMP 137
            RGN+++ +PS +Q++EA +L+      W  S     +L P D+  +  VW++ +KNRL+P
Sbjct: 1186 RGNEILVHPSDEQVEEARRLICRPHKTWTISTMGKLSLKPLDINEQATVWMYVVKNRLIP 1245

Query: 138  TTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILACGKK 178
            T++DS+I  +R M++Y ++KG+E N G +IR EI +C +K
Sbjct: 1246 TSYDSSIKRNRAMIVYILVKGVEFNFGELIRNEIQSCSEK 1285

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038904385.12.6e-1836.72uncharacterized protein LOC120090747 [Benincasa hispida][more]
PON46472.11.3e-1733.15hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
XP_038876674.11.3e-1735.33chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida][more]
PON35554.11.1e-1632.61hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii][more]
KAA0048500.11.5e-1540.80protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucu... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5BCG46.1e-1833.15Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5AGA55.2e-1732.61Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A5A7TZE07.5e-1640.80Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00... [more]
A0A2P5DAQ21.7e-1533.33Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE... [more]
A0A6J1DMT33.1e-1439.00LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..253

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0005541.1Lag0005541.1mRNA