Lag0005541 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAAAAGTGATTTTCTCAACAAGAAGGGATTCTCTAATAAAGTAGGAGCACGGTCAGAGTTCGTAAGTAGAGTTATCTCACAGTATAAGTCGCAGGAGTTCTGTGCTCACCCTTTGGAGGTAGTGAGGGAGGAAAGCATAAGTATGGCGGTAGTGAGAGGCAAAATGGCCAGCTTCTCTTCAGTGGACATAAACTGGATGTACAGAATCAAAGCATCCTTACATCCAAGAGGGAATGATGTCATTAGGAACCCCTCGACCAAGCAGATGAAAGAAGCACTTAAATTAGTGGCCAACAAGGGAGTTCAATGGAAAGAGTCGCTGACGAAGGTGAAAACACTAGTGCCAAGCGACCTAAAGCCAGAACCGGAAGTGTGGCTTCACTTTCTAAAGAACCGATTGATGCCAACCACCCACGATAGCACTATCTCAGTAGATAGAGTTATGCTCCTCTACTGTATCATGAAAGGGTTGGAGATCAACATCGGTAGCATTATCAGAGAGGAGATTCTAGCTTGTGGAAAAAAAGAGCAGGTAAACTTTTCTTTGGATCACTTATCACCCAGCTTTGTTAGAGGGTGAAGATAGTTCCGCGCAAGGACGAGGAGCGTCATTTTTCAAGCCTACCATTGACCTGTCCTTGATCGGGAAGTTTCAACAAAATAGCCTCCAAAGGAAATACAAAGCCTTCACATCTCAGGCCACTCCACCATCAGGGTTGAACATATCTTTTCAATCCTATCACACTCTTTTTACAGGGCCTCTCACCATCATCTGAAGCCCTAGCCATTGCCTACCGTTAGCTAGATCAAATCAAGGACAACCTGAATACTTATTGGGCATATGCAAAGGAGAGGGATGAAGCCAATAGAGAGTTCATTCTCTCTATCGCCCCAAGTATTGTTCCAGTCTTTCCCGATTTCCCTCAATCACTACTGCCTCAAGAAAAAAAGGATTTTGATGATGGAGAAGATGAAAACGATGATGGAAAAGATGAAGAGAAAGAGAGTTCCTCGGAAGAGGACTAG ATGAGAAAAAGTGATTTTCTCAACAAGAAGGGATTCTCTAATAAAGTAGGAGCACGGTCAGAGTTCGTAAGTAGAGTTATCTCACAGTATAAGTCGCAGGAGTTCTGTGCTCACCCTTTGGAGGTAGTGAGGGAGGAAAGCATAAGTATGGCGGTAGTGAGAGGCAAAATGGCCAGCTTCTCTTCAGTGGACATAAACTGGATGTACAGAATCAAAGCATCCTTACATCCAAGAGGGAATGATGTCATTAGGAACCCCTCGACCAAGCAGATGAAAGAAGCACTTAAATTAGTGGCCAACAAGGGAGTTCAATGGAAAGAGTCGCTGACGAAGGTGAAAACACTAGTGCCAAGCGACCTAAAGCCAGAACCGGAAGTGTGGCTTCACTTTCTAAAGAACCGATTGATGCCAACCACCCACGATAGCACTATCTCAGTAGATAGAGTTATGCTCCTCTACTGTATCATGAAAGGGTTGGAGATCAACATCGGTAGCATTATCAGAGAGGAGATTCTAGCTTGTGGAAAAAAAGAGCAGCTAGATCAAATCAAGGACAACCTGAATACTTATTGGGCATATGCAAAGGAGAGGGATGAAGCCAATAGAGAGTTCATTCTCTCTATCGCCCCAAGTATTGTTCCAGTCTTTCCCGATTTCCCTCAATCACTACTGCCTCAAGAAAAAAAGGATTTTGATGATGGAGAAGATGAAAACGATGATGGAAAAGATGAAGAGAAAGAGAGTTCCTCGGAAGAGGACTAG ATGAGAAAAAGTGATTTTCTCAACAAGAAGGGATTCTCTAATAAAGTAGGAGCACGGTCAGAGTTCGTAAGTAGAGTTATCTCACAGTATAAGTCGCAGGAGTTCTGTGCTCACCCTTTGGAGGTAGTGAGGGAGGAAAGCATAAGTATGGCGGTAGTGAGAGGCAAAATGGCCAGCTTCTCTTCAGTGGACATAAACTGGATGTACAGAATCAAAGCATCCTTACATCCAAGAGGGAATGATGTCATTAGGAACCCCTCGACCAAGCAGATGAAAGAAGCACTTAAATTAGTGGCCAACAAGGGAGTTCAATGGAAAGAGTCGCTGACGAAGGTGAAAACACTAGTGCCAAGCGACCTAAAGCCAGAACCGGAAGTGTGGCTTCACTTTCTAAAGAACCGATTGATGCCAACCACCCACGATAGCACTATCTCAGTAGATAGAGTTATGCTCCTCTACTGTATCATGAAAGGGTTGGAGATCAACATCGGTAGCATTATCAGAGAGGAGATTCTAGCTTGTGGAAAAAAAGAGCAGCTAGATCAAATCAAGGACAACCTGAATACTTATTGGGCATATGCAAAGGAGAGGGATGAAGCCAATAGAGAGTTCATTCTCTCTATCGCCCCAAGTATTGTTCCAGTCTTTCCCGATTTCCCTCAATCACTACTGCCTCAAGAAAAAAAGGATTTTGATGATGGAGAAGATGAAAACGATGATGGAAAAGATGAAGAGAAAGAGAGTTCCTCGGAAGAGGACTAG MRKSDFLNKKGFSNKVGARSEFVSRVISQYKSQEFCAHPLEVVREESISMAVVRGKMASFSSVDINWMYRIKASLHPRGNDVIRNPSTKQMKEALKLVANKGVQWKESLTKVKTLVPSDLKPEPEVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEILACGKKEQLDQIKDNLNTYWAYAKERDEANREFILSIAPSIVPVFPDFPQSLLPQEKKDFDDGEDENDDGKDEEKESSSEED Homology
BLAST of Lag0005541 vs. NCBI nr
Match: XP_038904385.1 (uncharacterized protein LOC120090747 [Benincasa hispida]) HSP 1 Score: 103.6 bits (257), Expect = 2.6e-18 Identity = 47/128 (36.72%), Postives = 80/128 (62.50%), Query Frame = 0
BLAST of Lag0005541 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]) HSP 1 Score: 101.3 bits (251), Expect = 1.3e-17 Identity = 61/184 (33.15%), Postives = 104/184 (56.52%), Query Frame = 0
BLAST of Lag0005541 vs. NCBI nr
Match: XP_038876674.1 (chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]) HSP 1 Score: 101.3 bits (251), Expect = 1.3e-17 Identity = 53/150 (35.33%), Postives = 90/150 (60.00%), Query Frame = 0
BLAST of Lag0005541 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]) HSP 1 Score: 98.2 bits (243), Expect = 1.1e-16 Identity = 60/184 (32.61%), Postives = 101/184 (54.89%), Query Frame = 0
BLAST of Lag0005541 vs. NCBI nr
Match: KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa]) HSP 1 Score: 94.4 bits (233), Expect = 1.5e-15 Identity = 51/125 (40.80%), Postives = 77/125 (61.60%), Query Frame = 0
BLAST of Lag0005541 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 6.1e-18 Identity = 61/184 (33.15%), Postives = 104/184 (56.52%), Query Frame = 0
BLAST of Lag0005541 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 5.2e-17 Identity = 60/184 (32.61%), Postives = 101/184 (54.89%), Query Frame = 0
BLAST of Lag0005541 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 7.5e-16 Identity = 51/125 (40.80%), Postives = 77/125 (61.60%), Query Frame = 0
BLAST of Lag0005541 vs. ExPASy TrEMBL
Match: A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.7e-15 Identity = 56/168 (33.33%), Postives = 88/168 (52.38%), Query Frame = 0
BLAST of Lag0005541 vs. ExPASy TrEMBL
Match: A0A6J1DMT3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia OX=3673 GN=LOC111022007 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.1e-14 Identity = 39/100 (39.00%), Postives = 67/100 (67.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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