Lag0005480 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTATCGGAAATGATCGCAGGAGGGGAGGATTTTATTTTACATGTTGATGCAACTTGGGACGAGAAGGTAAAGCGAAGTGGAGTGGAGGTAGTGATTCGTACAAAGCCAGGGACATTGGTGGTCGTCTTACAAAAGGGGATTCCCTTTTACTCAACTTCACTATGTGTCGAAGCGGTAGCAGTCCTTGAGGGTTTTAAATTGGCAACTCAGAGGAACATCCATAGAGTTACGATTTGCTCGGATTCCCTATCGTTGATTTCCACTCTTCTTCTGACAGAATGGTGTCAAGCGGAATGCTTTCCAATTGTGTCAGATATCCAACAATTGGGGACTTTATTTCAACAGATCAGTTATTGCCATGTGAATCGTGAATACAACCGTTTGTCTCATGAATTAGCTAGATTAGACATGGTTTCAACTACTCGATTTTGGAGTAGGAACTTTCCAATTTGGATAGAAGATATAGCTCGTTGTGAGTTGTGTTGTTTTGTTACCCCACTGGAGCTTTTTTGA ATGGTATCGGAAATGATCGCAGGAGGGGAGGATTTTATTTTACATGTTGATGCAACTTGGGACGAGAAGGTAAAGCGAAGTGGAGTGGAGGTAGTGATTCGTACAAAGCCAGGGACATTGGTGGTCGTCTTACAAAAGGGGATTCCCTTTTACTCAACTTCACTATGTGTCGAAGCGGTAGCAGTCCTTGAGGGTTTTAAATTGGCAACTCAGAGGAACATCCATAGAGTTACGATTTGCTCGGATTCCCTATCGTTGATTTCCACTCTTCTTCTGACAGAATGGTGTCAAGCGGAATGCTTTCCAATTGTGTCAGATATCCAACAATTGGGGACTTTATTTCAACAGATCAGTTATTGCCATGTGAATCGTGAATACAACCGTTTGTCTCATGAATTAGCTAGATTAGACATGGTTTCAACTACTCGATTTTGGAGTAGGAACTTTCCAATTTGGATAGAAGATATAGCTCGTTGTGAGTTGTGTTGTTTTGTTACCCCACTGGAGCTTTTTTGA ATGGTATCGGAAATGATCGCAGGAGGGGAGGATTTTATTTTACATGTTGATGCAACTTGGGACGAGAAGGTAAAGCGAAGTGGAGTGGAGGTAGTGATTCGTACAAAGCCAGGGACATTGGTGGTCGTCTTACAAAAGGGGATTCCCTTTTACTCAACTTCACTATGTGTCGAAGCGGTAGCAGTCCTTGAGGGTTTTAAATTGGCAACTCAGAGGAACATCCATAGAGTTACGATTTGCTCGGATTCCCTATCGTTGATTTCCACTCTTCTTCTGACAGAATGGTGTCAAGCGGAATGCTTTCCAATTGTGTCAGATATCCAACAATTGGGGACTTTATTTCAACAGATCAGTTATTGCCATGTGAATCGTGAATACAACCGTTTGTCTCATGAATTAGCTAGATTAGACATGGTTTCAACTACTCGATTTTGGAGTAGGAACTTTCCAATTTGGATAGAAGATATAGCTCGTTGTGAGTTGTGTTGTTTTGTTACCCCACTGGAGCTTTTTTGA MVSEMIAGGEDFILHVDATWDEKVKRSGVEVVIRTKPGTLVVVLQKGIPFYSTSLCVEAVAVLEGFKLATQRNIHRVTICSDSLSLISTLLLTEWCQAECFPIVSDIQQLGTLFQQISYCHVNREYNRLSHELARLDMVSTTRFWSRNFPIWIEDIARCELCCFVTPLELF Homology
BLAST of Lag0005480 vs. NCBI nr
Match: XP_023904539.1 (uncharacterized protein LOC112016250 [Quercus suber]) HSP 1 Score: 76.3 bits (186), Expect = 2.9e-10 Identity = 46/157 (29.30%), Postives = 83/157 (52.87%), Query Frame = 0
BLAST of Lag0005480 vs. NCBI nr
Match: XP_023897448.1 (uncharacterized protein LOC112009346 [Quercus suber]) HSP 1 Score: 73.9 bits (180), Expect = 1.5e-09 Identity = 47/157 (29.94%), Postives = 82/157 (52.23%), Query Frame = 0
BLAST of Lag0005480 vs. NCBI nr
Match: XP_030963888.1 (uncharacterized protein LOC115985057 [Quercus lobata]) HSP 1 Score: 71.6 bits (174), Expect = 7.3e-09 Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 0
BLAST of Lag0005480 vs. NCBI nr
Match: XP_030927178.1 (uncharacterized protein LOC115953579 [Quercus lobata]) HSP 1 Score: 70.1 bits (170), Expect = 2.1e-08 Identity = 43/132 (32.58%), Postives = 69/132 (52.27%), Query Frame = 0
BLAST of Lag0005480 vs. NCBI nr
Match: XP_027088768.1 (uncharacterized protein LOC113710130 [Coffea arabica]) HSP 1 Score: 68.9 bits (167), Expect = 4.7e-08 Identity = 41/146 (28.08%), Postives = 75/146 (51.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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