Lag0005477 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0005477
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr6: 19120293 .. 19120610 (-)
RNA-Seq ExpressionLag0005477
SyntenyLag0005477
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAACGCGAGAAGATGAGGCTCGGGTTGTAGAACGCGCACAAATCTTACTGAACGGTGTGAAGGGAGTTATATCAGCCTTCAATCAACTGAGAACAAGAGAAGAGAGGCTTACCCATATAATTTACCTTGTTGAACAACACCCGAAAGGGAGATTTGAGCCACGAAACCCACCCAAAACGAGAGAGAGATCGCACGAGGGTGAGGGCGGTGGCTACTTGTGTTGCTGCGACAGAACAGGGTCGGCGACGGAAAGGGGCGACTCGACACTGATCTTCGGCGGCTCTTCAAGCTCCTCACGACGGTTGGCTGAATAG

mRNA sequence

ATGAAAACGCGAGAAGATGAGGCTCGGGTTGTAGAACGCGCACAAATCTTACTGAACGGTGTGAAGGGAGTTATATCAGCCTTCAATCAACTGAGAACAAGAGAAGAGAGGCTTACCCATATAATTTACCTTGTTGAACAACACCCGAAAGGGAGATTTGAGCCACGAAACCCACCCAAAACGAGAGAGAGATCGCACGAGGGTGAGGGCGGTGGCTACTTGTGTTGCTGCGACAGAACAGGGTCGGCGACGGAAAGGGGCGACTCGACACTGATCTTCGGCGGCTCTTCAAGCTCCTCACGACGGTTGGCTGAATAG

Coding sequence (CDS)

ATGAAAACGCGAGAAGATGAGGCTCGGGTTGTAGAACGCGCACAAATCTTACTGAACGGTGTGAAGGGAGTTATATCAGCCTTCAATCAACTGAGAACAAGAGAAGAGAGGCTTACCCATATAATTTACCTTGTTGAACAACACCCGAAAGGGAGATTTGAGCCACGAAACCCACCCAAAACGAGAGAGAGATCGCACGAGGGTGAGGGCGGTGGCTACTTGTGTTGCTGCGACAGAACAGGGTCGGCGACGGAAAGGGGCGACTCGACACTGATCTTCGGCGGCTCTTCAAGCTCCTCACGACGGTTGGCTGAATAG

Protein sequence

MKTREDEARVVERAQILLNGVKGVISAFNQLRTREERLTHIIYLVEQHPKGRFEPRNPPKTRERSHEGEGGGYLCCCDRTGSATERGDSTLIFGGSSSSSRRLAE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..105

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0005477.1Lag0005477.1mRNA