Lag0005417 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0005417
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrotrans_gag domain-containing protein
Location	chr6: 17302409 .. 17303309 (-)
RNA-Seq Expression	Lag0005417
Synteny	Lag0005417

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAACAAGTTAGCAGAGAAATTTCTTAGTAAGTATTTTCCACCAATTAGAAATGCCAAGTTAAGGAGTGAGATAGTGAGATTTAGGCAAAATGAGGAAGAAACTTTTAGTGAGGCTAGGGAAAGGTTTAAGGAGCTTTTGCAAAAGTGTCCCTACCACTGTTTACCACATTGTATTCAAATGGAAATATTTTACAATGGGTTAAACTTAGCAACCCAGTGTATTGTTGATGCTTCTGCGGGAGGGGCCCTTTTGGCAAAAACCTTTAATGAGGCTTATGAGACTTTAGAGAGAATATCAACCTACAGTTGTCAGTGGTCAGACGTGAGAGGCTCTAGTAAGAAAGTTAAAGCAATAATGGAAGTTGATGATGTGTCAACCATTAGGGCTGATATTGCATCATTGGCTAATACTCTTAAAAGTATGGCACTTGTTAGCAATGTTCAGCAGTCGCCAGTGGTGGAATCTATTGCATTTCTGAATCACGTAGCAGCTGAATCTTGTGTCTATTGTGGTGAAGAGCATAATTTTGAATTTTGCCCCAACAACCCAGCTTCTGTGTTTTTCATAGGTAACCAAAGAAATAACCCATATTCAATTTTTTACAATCCAGGTTGGCGTAACCACCTCAACTTTGCATGGGTAGGGCAAATAAGCAATTCACAAGCCCCCAAGCACAGCAGAAGGTGGAAAACCAGTCAGGATTTGCTAAATCGCAGGGAATGCCCCAAAAAATAAGCAGGCATTGCCCCATAAAAATTCAGAGAGTTCTCTGGAGACTTTGATGAAAGAATATATGACTCGTACTGATGCCACAATTCAGAGTAATCAAGCTTCATTTAGAGCCCTAGAATTGCAAATGGGTCAGCTAGCTAATGAGCTGAAGGCACGACCTTAA

mRNA sequence

ATGTGGAACAAGTTAGCAGAGAAATTTCTTAGTAAGTATTTTCCACCAATTAGAAATGCCAAGTTAAGGAGTGAGATAGTGAGATTTAGGCAAAATGAGGAAGAAACTTTTAGTGAGGCTAGGGAAAGGTTTAAGGAGCTTTTGCAAAAGTGTCCCTACCACTGTTTACCACATTGTATTCAAATGGAAATATTTTACAATGGGTTAAACTTAGCAACCCAGTGTATTGTTGATGCTTCTGCGGGAGGGGCCCTTTTGGCAAAAACCTTTAATGAGGCTTATGAGACTTTAGAGAGAATATCAACCTACAGTTGTCAGTGGTCAGACGTGAGAGGCTCTAGTAAGAAAGTTAAAGCAATAATGGAAGTTGATGATGTGTCAACCATTAGGGCTGATATTGCATCATTGGCTAATACTCTTAAAAGTATGGCACTTGTTAGCAATGTTCAGCAGTCGCCAGTGGTGGAATCTATTGCATTTCTGAATCACGTAGCAGCTGAATCTTGTGTCTATTGTGGTGAAGAGCATAATTTTGAATTTTGCCCCAACAACCCAGCTTCTGTGTTTTTCATAGGGAATGCCCCAAAAAATAAGCAGGCATTGCCCCATAAAAATTCAGAGAGTTCTCTGGAGACTTTGATGAAAGAATATATGACTCGTACTGATGCCACAATTCAGAGTAATCAAGCTTCATTTAGAGCCCTAGAATTGCAAATGGGTCAGCTAGCTAATGAGCTGAAGGCACGACCTTAA

Coding sequence (CDS)

ATGTGGAACAAGTTAGCAGAGAAATTTCTTAGTAAGTATTTTCCACCAATTAGAAATGCCAAGTTAAGGAGTGAGATAGTGAGATTTAGGCAAAATGAGGAAGAAACTTTTAGTGAGGCTAGGGAAAGGTTTAAGGAGCTTTTGCAAAAGTGTCCCTACCACTGTTTACCACATTGTATTCAAATGGAAATATTTTACAATGGGTTAAACTTAGCAACCCAGTGTATTGTTGATGCTTCTGCGGGAGGGGCCCTTTTGGCAAAAACCTTTAATGAGGCTTATGAGACTTTAGAGAGAATATCAACCTACAGTTGTCAGTGGTCAGACGTGAGAGGCTCTAGTAAGAAAGTTAAAGCAATAATGGAAGTTGATGATGTGTCAACCATTAGGGCTGATATTGCATCATTGGCTAATACTCTTAAAAGTATGGCACTTGTTAGCAATGTTCAGCAGTCGCCAGTGGTGGAATCTATTGCATTTCTGAATCACGTAGCAGCTGAATCTTGTGTCTATTGTGGTGAAGAGCATAATTTTGAATTTTGCCCCAACAACCCAGCTTCTGTGTTTTTCATAGGGAATGCCCCAAAAAATAAGCAGGCATTGCCCCATAAAAATTCAGAGAGTTCTCTGGAGACTTTGATGAAAGAATATATGACTCGTACTGATGCCACAATTCAGAGTAATCAAGCTTCATTTAGAGCCCTAGAATTGCAAATGGGTCAGCTAGCTAATGAGCTGAAGGCACGACCTTAA

Protein sequence

MWNKLAEKFLSKYFPPIRNAKLRSEIVRFRQNEEETFSEARERFKELLQKCPYHCLPHCIQMEIFYNGLNLATQCIVDASAGGALLAKTFNEAYETLERISTYSCQWSDVRGSSKKVKAIMEVDDVSTIRADIASLANTLKSMALVSNVQQSPVVESIAFLNHVAAESCVYCGEEHNFEFCPNNPASVFFIGNAPKNKQALPHKNSESSLETLMKEYMTRTDATIQSNQASFRALELQMGQLANELKARP

Homology

[Close]

BLAST of Lag0005417 vs. NCBI nr
Match: XP_022929949.1 (uncharacterized protein LOC111436411 [Cucurbita moschata])

HSP 1 Score: 259.2 bits (661), Expect = 3.6e-65
Identity = 140/302 (46.36%), Postives = 186/302 (61.59%), Query Frame = 0


Query: 2   WNKLAEKFLSKYFPPIRNAKLRSEIVRFRQNEEETFSEARERFKELLQKCPYHCLPHCIQ 61
           WN LAE FL KYFPP RNA+ ++EIV F+Q E+ET SEA ERFKE+L+KCP+H LPHCIQ
Sbjct: 182 WNSLAENFLIKYFPPTRNARFKNEIVTFQQFEDETLSEACERFKEMLRKCPHHGLPHCIQ 241

Query: 62  MEIFYNGLNLATQCIVDASAGGALLAKTFNEAYETLERISTYSCQWSDVRGS-SKKVKAI 121
           ME FYNGLN+ T+ +VDASA GA+L+KT+NEAYE LERI++ +CQW+DVR +  +K + +
Sbjct: 242 METFYNGLNIVTKQVVDASANGAILSKTYNEAYEILERIASNNCQWADVRSNPGRKTRGV 301

Query: 122 MEVDDVSTIRADIASLANTLKSMALVSNVQQSPVVESIAFLNHVAAESCVYCGEEHNFEF 181
           +EVD +S+I A +AS+ N L+++AL  +      V + A +N  AAESCVYCGEEH F+ 
Sbjct: 302 LEVDALSSINAQLASVTNILQNLALGQDSMIKAPVHTAAAINQTAAESCVYCGEEHTFDQ 361

Query: 182 CPNNPASVFFIGNAPK-------------------------------NKQALPHKN---- 241
           CP+NPAS+F++GN                                  N+Q  P  N    
Sbjct: 362 CPSNPASIFYVGNQASQGNLKNNPFSNTYNPGWRNHPNFSWKGQSLYNQQMPPKANYPSG 421

[Close]

BLAST of Lag0005417 vs. NCBI nr
Match: XP_022926214.1 (uncharacterized protein LOC111433394 [Cucurbita moschata])

HSP 1 Score: 254.2 bits (648), Expect = 1.2e-63
Identity = 139/300 (46.33%), Postives = 188/300 (62.67%), Query Frame = 0


Query: 2   WNKLAEKFLSKYFPPIRNAKLRSEIVRFRQNEEETFSEARERFKELLQKCPYHCLPHCIQ 61
           WN L EKFL KYFPP RNA+ R+EIV F+Q E++T SEA ERFKE+L+KCP+H LPHCIQ
Sbjct: 153 WNSLVEKFLIKYFPPTRNARFRNEIVVFQQFEDDTLSEAWERFKEMLRKCPHHGLPHCIQ 212

Query: 62  MEIFYNGLNLATQCIVDASAGGALLAKTFNEAYETLERISTYSCQWSDVRGS-SKKVKAI 121
           ME FYNGLN+AT+ +VDASA GA+L+KT+NEAYE LERI++ +CQW+DVR +  +K + +
Sbjct: 213 METFYNGLNIATKQVVDASANGAILSKTYNEAYEILERIASNNCQWADVRSNPGRKTRGV 272

Query: 122 MEVDDVSTIRADIASLANTLKSMALVSNVQQSPVVESIAFLNHVAAESCVYCGEEHNFEF 181
           +EVD +S+I A +AS+ N L+++AL  +      V ++A +N  AAESCVYCGEEH F+ 
Sbjct: 273 LEVDALSSINAQLASVTNILQNLALGQDSMIKAPVHTVAVINQTAAESCVYCGEEHTFDQ 332

Query: 182 CPNNPASVFFIGNA-----PKN-------------------------KQALPHK------ 239
           CP+NPAS+F++GN      PKN                          Q +P K      
Sbjct: 333 CPSNPASIFYVGNQASQGNPKNNPFSNTYNPGWRNHPNFSWKGQGSYNQQMPPKANYPPG 392

[Close]

BLAST of Lag0005417 vs. NCBI nr
Match: XP_030494802.1 (uncharacterized protein LOC115710583 [Cannabis sativa])

HSP 1 Score: 254.2 bits (648), Expect = 1.2e-63
Identity = 135/271 (49.82%), Postives = 187/271 (69.00%), Query Frame = 0


Query: 2   WNKLAEKFLSKYFPPIRNAKLRSEIVRFRQNEEETFSEARERFKELLQKCPYHCLPHCIQ 61
           WN LAEKFL KYFPP RNAK RSEI+ F+Q+E+ET S+A ERFKE+L+KCP+H +PHCIQ
Sbjct: 58  WNDLAEKFLRKYFPPTRNAKFRSEIMSFQQSEDETTSDAWERFKEVLRKCPHHGIPHCIQ 117

Query: 62  MEIFYNGLNLATQCIVDASAGGALLAKTFNEAYETLERISTYSCQWSDVRG-SSKKVKAI 121
           +E FYNGLN A++ ++DASA GA+L+K++NEA+E LERI++ + QWS  R  +S+KV  +
Sbjct: 118 LETFYNGLNAASRMVLDASANGAILSKSYNEAFEILERIASNNYQWSTNRAPTSRKVAGV 177

Query: 122 MEVDDVSTIRADIASLANTLKSMALVSNVQQSPVVESIAFLNHVAAESCVYCGEEHNFEF 181
           +EVD ++ + A +AS+ N LK+M +  +VQ +  ++        A  SCVYCG+ H FE 
Sbjct: 178 LEVDALTALTAQMASMTNILKNMNMGGSVQPAATIQR-------AEISCVYCGDGHTFEN 237

Query: 182 CPNNPASVFFIG------NAPKNKQALPHKNSE---------------SSLETLMKEYMT 241
           CP+NPASV ++G         + KQ+ P   S+               SSLE+LM++YM 
Sbjct: 238 CPSNPASVCYVGASSSGAEQAQGKQSFPPGFSQQPRPQQPHQPQGSQTSSLESLMRDYMA 297

Query: 242 RTDATIQSNQASFRALELQMGQLANELKARP 251
           + DA IQS  AS + LE+Q+GQLAN+LK RP
Sbjct: 298 KNDAVIQSQAASLQNLEIQLGQLANDLKNRP 321

[Close]

BLAST of Lag0005417 vs. NCBI nr
Match: XP_022947838.1 (uncharacterized protein LOC111451598 [Cucurbita moschata])

HSP 1 Score: 253.1 bits (645), Expect = 2.6e-63
Identity = 143/312 (45.83%), Postives = 185/312 (59.29%), Query Frame = 0


Query: 2   WNKLAEKFLSKYFPPIRNAKLRSEIVRFRQNEEETFSEARERFKELLQKCPYHCLPHCIQ 61
           WN LAEKFL KYFPP R+A+ R+EIV F++ E ET SEA ERFKE L+KCP+H LPHCIQ
Sbjct: 123 WNSLAEKFLFKYFPPTRSARFRNEIVAFQKFENETLSEAWERFKETLRKCPHHGLPHCIQ 182

Query: 62  MEIFYNGLNLATQCIVDASAGGALLAKTFNEAYETLERISTYSCQWSDVRGS-SKKVKAI 121
           +E FYNGLN AT+ +VDASA G +L+KT+NEAYE LERI++ +CQW DVR +  KK + +
Sbjct: 183 IETFYNGLNTATKQVVDASANGDILSKTYNEAYEILERIASNNCQWVDVRSNPGKKTREV 242

Query: 122 MEVDDVSTIRADIASLANTLKSMALVSNVQQSPVVESIAFLNHVAAESCVYCGEEHNFEF 181
           +EVD +S+I A +AS+ N L+++A            +   +   A ESCVYCGE+H F+ 
Sbjct: 243 LEVDALSSINAQLASMTNILQNLAFGQGSMIKAPAHTATVMIQTATESCVYCGEKHTFDQ 302

Query: 182 CPNNPASVFFIGNA-----PK--------------------------NKQALPHKN---- 241
           CP+NPAS+F++GN      PK                          N+Q  P  N    
Sbjct: 303 CPSNPASIFYVGNQASQGNPKTNPSSNTYNPGWRNHPNFLCKGQGSYNQQMPPKANYPPG 362

Query: 242 ---------------------------SESSLETLMKEYMTRTDATIQSNQASFRALELQ 251
                                      S + LE+L+KEYM R DA IQS Q S R LE+Q
Sbjct: 363 FGLQNQLTYDSQQATTQGEGTSQAQHISGTLLESLIKEYMARNDAVIQSQQVSLRNLEVQ 422

[Close]

BLAST of Lag0005417 vs. NCBI nr
Match: XP_030497803.1 (uncharacterized protein LOC115713460 [Cannabis sativa])

HSP 1 Score: 250.8 bits (639), Expect = 1.3e-62
Identity = 136/291 (46.74%), Postives = 185/291 (63.57%), Query Frame = 0


Query: 2   WNKLAEKFLSKYFPPIRNAKLRSEIVRFRQNEEETFSEARERFKELLQKCPYHCLPHCIQ 61
           WN LAEKFL KYFPP RNAK RSEI+ F+Q+E+ET S+A ERFKELL+KCP+H +PHCIQ
Sbjct: 128 WNDLAEKFLRKYFPPTRNAKFRSEIMSFQQSEDETTSDAWERFKELLRKCPHHGIPHCIQ 187

Query: 62  MEIFYNGLNLATQCIVDASAGGALLAKTFNEAYETLERISTYSCQWSDVRG-SSKKVKAI 121
           +E FYNGLN A++ ++DASA GA+L+K++NEA+E LERI++ + QWS  R  +S+KV  +
Sbjct: 188 LETFYNGLNAASRMVLDASANGAILSKSYNEAFEILERIASNNYQWSTNRAHTSRKVAGV 247

Query: 122 MEVDDVSTIRADIASLANTLKSMALVSNVQQSPVVESIAFLNHVAAESCVYCGEEHNFEF 181
           +EVD ++ + A +AS+ N LK+M +  +VQ +  ++        A  SCVYCG+ H FE 
Sbjct: 248 LEVDALTALTAQMASMTNILKNMNMGGSVQPAAAIQR-------AKNSCVYCGDGHTFEN 307

Query: 182 CPNNPASVFFIGNAPKNKQALPHKNS---------------------------------- 241
           CP+N ASV ++GN   N+   P+ NS                                  
Sbjct: 308 CPSNLASVCYVGNQNFNRNNNPYSNSYNPAWKHHPNFSWGGQGKQSFPPGFSQQPRPQQP 367

Query: 242 -------ESSLETLMKEYMTRTDATIQSNQASFRALELQMGQLANELKARP 251
                   SSLE+LM++YM + D  IQS  AS R LE+Q+GQLAN+LK RP
Sbjct: 368 HQPQGSQTSSLESLMRDYMAKNDTVIQSQAASLRNLEVQLGQLANDLKNRP 411

[Close]

BLAST of Lag0005417 vs. ExPASy TrEMBL
Match: A0A6J1EQ90 (uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC111436411 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.7e-65
Identity = 140/302 (46.36%), Postives = 186/302 (61.59%), Query Frame = 0


Query: 2   WNKLAEKFLSKYFPPIRNAKLRSEIVRFRQNEEETFSEARERFKELLQKCPYHCLPHCIQ 61
           WN LAE FL KYFPP RNA+ ++EIV F+Q E+ET SEA ERFKE+L+KCP+H LPHCIQ
Sbjct: 182 WNSLAENFLIKYFPPTRNARFKNEIVTFQQFEDETLSEACERFKEMLRKCPHHGLPHCIQ 241

Query: 62  MEIFYNGLNLATQCIVDASAGGALLAKTFNEAYETLERISTYSCQWSDVRGS-SKKVKAI 121
           ME FYNGLN+ T+ +VDASA GA+L+KT+NEAYE LERI++ +CQW+DVR +  +K + +
Sbjct: 242 METFYNGLNIVTKQVVDASANGAILSKTYNEAYEILERIASNNCQWADVRSNPGRKTRGV 301

Query: 122 MEVDDVSTIRADIASLANTLKSMALVSNVQQSPVVESIAFLNHVAAESCVYCGEEHNFEF 181
           +EVD +S+I A +AS+ N L+++AL  +      V + A +N  AAESCVYCGEEH F+ 
Sbjct: 302 LEVDALSSINAQLASVTNILQNLALGQDSMIKAPVHTAAAINQTAAESCVYCGEEHTFDQ 361

Query: 182 CPNNPASVFFIGNAPK-------------------------------NKQALPHKN---- 241
           CP+NPAS+F++GN                                  N+Q  P  N    
Sbjct: 362 CPSNPASIFYVGNQASQGNLKNNPFSNTYNPGWRNHPNFSWKGQSLYNQQMPPKANYPSG 421

[Close]

BLAST of Lag0005417 vs. ExPASy TrEMBL
Match: A0A6J1EEI2 (uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC111433394 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 5.6e-64
Identity = 139/300 (46.33%), Postives = 188/300 (62.67%), Query Frame = 0


Query: 2   WNKLAEKFLSKYFPPIRNAKLRSEIVRFRQNEEETFSEARERFKELLQKCPYHCLPHCIQ 61
           WN L EKFL KYFPP RNA+ R+EIV F+Q E++T SEA ERFKE+L+KCP+H LPHCIQ
Sbjct: 153 WNSLVEKFLIKYFPPTRNARFRNEIVVFQQFEDDTLSEAWERFKEMLRKCPHHGLPHCIQ 212

Query: 62  MEIFYNGLNLATQCIVDASAGGALLAKTFNEAYETLERISTYSCQWSDVRGS-SKKVKAI 121
           ME FYNGLN+AT+ +VDASA GA+L+KT+NEAYE LERI++ +CQW+DVR +  +K + +
Sbjct: 213 METFYNGLNIATKQVVDASANGAILSKTYNEAYEILERIASNNCQWADVRSNPGRKTRGV 272

Query: 122 MEVDDVSTIRADIASLANTLKSMALVSNVQQSPVVESIAFLNHVAAESCVYCGEEHNFEF 181
           +EVD +S+I A +AS+ N L+++AL  +      V ++A +N  AAESCVYCGEEH F+ 
Sbjct: 273 LEVDALSSINAQLASVTNILQNLALGQDSMIKAPVHTVAVINQTAAESCVYCGEEHTFDQ 332

Query: 182 CPNNPASVFFIGNA-----PKN-------------------------KQALPHK------ 239
           CP+NPAS+F++GN      PKN                          Q +P K      
Sbjct: 333 CPSNPASIFYVGNQASQGNPKNNPFSNTYNPGWRNHPNFSWKGQGSYNQQMPPKANYPPG 392

[Close]

BLAST of Lag0005417 vs. ExPASy TrEMBL
Match: A0A6J1G7Q6 (uncharacterized protein LOC111451598 OS=Cucurbita moschata OX=3662 GN=LOC111451598 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.2e-63
Identity = 143/312 (45.83%), Postives = 185/312 (59.29%), Query Frame = 0


Query: 2   WNKLAEKFLSKYFPPIRNAKLRSEIVRFRQNEEETFSEARERFKELLQKCPYHCLPHCIQ 61
           WN LAEKFL KYFPP R+A+ R+EIV F++ E ET SEA ERFKE L+KCP+H LPHCIQ
Sbjct: 123 WNSLAEKFLFKYFPPTRSARFRNEIVAFQKFENETLSEAWERFKETLRKCPHHGLPHCIQ 182

Query: 62  MEIFYNGLNLATQCIVDASAGGALLAKTFNEAYETLERISTYSCQWSDVRGS-SKKVKAI 121
           +E FYNGLN AT+ +VDASA G +L+KT+NEAYE LERI++ +CQW DVR +  KK + +
Sbjct: 183 IETFYNGLNTATKQVVDASANGDILSKTYNEAYEILERIASNNCQWVDVRSNPGKKTREV 242

Query: 122 MEVDDVSTIRADIASLANTLKSMALVSNVQQSPVVESIAFLNHVAAESCVYCGEEHNFEF 181
           +EVD +S+I A +AS+ N L+++A            +   +   A ESCVYCGE+H F+ 
Sbjct: 243 LEVDALSSINAQLASMTNILQNLAFGQGSMIKAPAHTATVMIQTATESCVYCGEKHTFDQ 302

Query: 182 CPNNPASVFFIGNA-----PK--------------------------NKQALPHKN---- 241
           CP+NPAS+F++GN      PK                          N+Q  P  N    
Sbjct: 303 CPSNPASIFYVGNQASQGNPKTNPSSNTYNPGWRNHPNFLCKGQGSYNQQMPPKANYPPG 362

Query: 242 ---------------------------SESSLETLMKEYMTRTDATIQSNQASFRALELQ 251
                                      S + LE+L+KEYM R DA IQS Q S R LE+Q
Sbjct: 363 FGLQNQLTYDSQQATTQGEGTSQAQHISGTLLESLIKEYMARNDAVIQSQQVSLRNLEVQ 422

[Close]

BLAST of Lag0005417 vs. ExPASy TrEMBL
Match: A0A6J1H7E4 (uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC111461168 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 7.1e-59
Identity = 116/209 (55.50%), Postives = 151/209 (72.25%), Query Frame = 0


Query: 2   WNKLAEKFLSKYFPPIRNAKLRSEIVRFRQNEEETFSEARERFKELLQKCPYHCLPHCIQ 61
           WN LAEKFL KYFPP RNA+ R+EIV F+Q E+ET SEA ERFKE+L+KCP+H LPHCIQ
Sbjct: 144 WNSLAEKFLIKYFPPTRNARFRNEIVAFQQFEDETLSEAWERFKEMLRKCPHHGLPHCIQ 203

Query: 62  MEIFYNGLNLATQCIVDASAGGALLAKTFNEAYETLERISTYSCQWSDVRGS-SKKVKAI 121
           ME FYNGLN+AT+ +VDASA GA+L+KT+NEAYE LERI++ +CQW+DVR +  KK + +
Sbjct: 204 METFYNGLNIATKQVVDASANGAMLSKTYNEAYEILERIASNNCQWADVRSNPGKKTRGV 263

Query: 122 MEVDDVSTIRADIASLANTLKSMALVSNVQQSPVVESIAFLNHVAAESCVYCGEEHNFEF 181
           +EVD +S+I A +AS+ N L+++A            + A +   A ESCVYCGEEH F+ 
Sbjct: 264 LEVDALSSINAQLASVTNILQNLAFGQGTMIKAPAHTAAVMTQTATESCVYCGEEHTFDQ 323

Query: 182 CPNNPASVFFIGNAPKNKQALPHKNSESS 210
           CP NPAS+ ++ N          KN+ SS
Sbjct: 324 CPRNPASILYVRNQASQGN---QKNNPSS 349

[Close]

BLAST of Lag0005417 vs. ExPASy TrEMBL
Match: U5CUI2 (Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMTR_s04947p00003620 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50
Identity = 103/195 (52.82%), Postives = 145/195 (74.36%), Query Frame = 0


Query: 2   WNKLAEKFLSKYFPPIRNAKLRSEIVRFRQNEEETFSEARERFKELLQKCPYHCLPHCIQ 61
           WN LAEKFL KYFPP RNAK RSEI+ F+Q E+E+ S+A ERFKELL+KCP+H +PHCIQ
Sbjct: 124 WNDLAEKFLRKYFPPTRNAKFRSEIMSFQQLEDESTSDAWERFKELLRKCPHHGIPHCIQ 183

Query: 62  MEIFYNGLNLATQCIVDASAGGALLAKTFNEAYETLERISTYSCQWSDVRG-SSKKVKAI 121
           ME FYNGLN A++ ++DASA GA+L+K++NEA+E LE I++ + QWS+ R  +S+KV  +
Sbjct: 184 METFYNGLNAASRMVLDASANGAILSKSYNEAFEILETIASNNYQWSNTRAPTSRKVAGV 243

Query: 122 MEVDDVSTIRADIASLANTLKSMAL--VSNVQQSPVVESIAFLNHVAAESCVYCGEEHNF 181
           +EVD ++ + A +AS+ N LK++++    N+Q +  ++S          SCV+CGE H F
Sbjct: 244 LEVDAITALTAQMASMTNVLKNLSIGNAKNIQPAAAIQS-------DDVSCVFCGEGHVF 303

Query: 182 EFCPNNPASVFFIGN 194
           E CP+NP SV ++GN
Sbjct: 304 EKCPSNPESVCYMGN 311

The following BLAST results are available for this feature:

BLAST of Lag0005417 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929949.1	3.6e-65	46.36	uncharacterized protein LOC111436411 [Cucurbita moschata]	[more]
XP_022926214.1	1.2e-63	46.33	uncharacterized protein LOC111433394 [Cucurbita moschata]	[more]
XP_030494802.1	1.2e-63	49.82	uncharacterized protein LOC115710583 [Cannabis sativa]	[more]
XP_022947838.1	2.6e-63	45.83	uncharacterized protein LOC111451598 [Cucurbita moschata]	[more]
XP_030497803.1	1.3e-62	46.74	uncharacterized protein LOC115713460 [Cannabis sativa]	[more]

BLAST of Lag0005417 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0005417 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQ90	1.7e-65	46.36	uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC1114364...	[more]
A0A6J1EEI2	5.6e-64	46.33	uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC1114333...	[more]
A0A6J1G7Q6	1.2e-63	45.83	uncharacterized protein LOC111451598 OS=Cucurbita moschata OX=3662 GN=LOC1114515...	[more]
A0A6J1H7E4	7.1e-59	55.50	uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]
U5CUI2	1.6e-50	52.82	Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMT...	[more]

BLAST of Lag0005417 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 30..50
None	No IPR available	PANTHER	PTHR24559:SF334	SUBFAMILY NOT NAMED	coord: 2..143
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..143
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 2..70 e-value: 1.6E-11 score: 44.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0005417.1	Lag0005417.1	mRNA