Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCAACCACCACCACCACACCTTTTGTCAATCCTCTCAGTATTGTTTTAACAGTAAAATTAGATGAGAGAAACTACTTACTTTGGAGATCCATGGTCCTTGTTGTTTTACGAGGACAGAAACTAGATGGCTATGTGTTGGGTACAGTTGCCCAACCATCAGAACTTATCCAAAGCTCTGGAATTGAAAATGTTGGTTCCATCGCAAATCCAGCCTATGAAACATGGATGTCCACAGATCAGTCACTCTTGGCTTGGTTGTATGGATCCATGTTACCTACCATTGCCTGTGATATTTTAAATCACAAAACATCTCGAGAGGTATGGAAGGCGCTGGAAAACCTCTATGGAGTGGTGGACAAGGCACGCATTACCCAACTCCAACGCAATCTCCAAACAACCCGAAAAAATCAGCAGAAGATGAGTGACTACCTATCTTCAATGAAGCAGATCGCAGATGGACTGCCCCTTGCTAGTGAACCCGTAAGTGAAAGTTCACTAATAACAAGCACACTTATGGGTCTAGATGTTGAATACATACCGGTAGCATGCCAGATAAATGCCAAAGAATCAATCACTTGGCAAGAAGTTTATTCAACACTCATCAAGTAAGTGCAAATCTGGATTTGTCTAATGCTTTAGCTAACTATGTTTCTACCAAAAATTTCAGTCAAGAGACTAGATCACAGAACCATGGGTATGACCAAAGTAGAAGCCAACGAAACAATGGTAGAGGTAGAGGTAGAGGTGGAAGAAATTTCTACCCAAGAGGAAACTCAAAGCCCACATGTGAAGTGTGCGGAAAGATGGGGCACACTGTTGAAAAATGTTATCATCGACTCAATATGCGCTACATGGGAAGCGCACCCAAAGAAGGTGAACACTCTGCAGCTGCTTACATTGCAACCCCAGACATAATAAATGACCCAAGTTGGCTACTAGACAGTGGTGCCATTGTTGGGTTCCCAGAGTGA
mRNA sequence
ATGAAAGCAACCACCACCACCACACCTTTTGTCAATCCTCTCAGTATTGTTTTAACAGTAAAATTAGATGAGAGAAACTACTTACTTTGGAGATCCATGGTCCTTGTTGTTTTACGAGGACAGAAACTAGATGGCTATGTGTTGGGTACAGTTGCCCAACCATCAGAACTTATCCAAAGCTCTGGAATTGAAAATGTTGGTTCCATCGCAAATCCAGCCTATGAAACATGGATGTCCACAGATCAGTCACTCTTGGCTTGGTTGTATGGATCCATGTTACCTACCATTGCCTGTGATATTTTAAATCACAAAACATCTCGAGAGGTATGGAAGGCGCTGGAAAACCTCTATGGAGTGGTGGACAAGGCACGCATTACCCAACTCCAACGCAATCTCCAAACAACCCGAAAAAATCAGCAGAAGATGAGTGACTACCTATCTTCAATGAAGCAGATCGCAGATGGACTGCCCCTTGCTAGTGAACCCGTAAGTGAAAGTTCACTAATAACAAGCACACTTATGGGTCTAGATGTTGAATACATACCGGTAGCATGCCAGATAAATGCCAAAGAATCAATCACTTGGCAAGAAGTTTATTCAACACTCATCAATCAAGAGACTAGATCACAGAACCATGGGTATGACCAAAGTAGAAGCCAACGAAACAATGGTAGAGGTAGAGGTAGAGGTGGAAGAAATTTCTACCCAAGAGGAAACTCAAAGCCCACATGTGAAGTGTGCGGAAAGATGGGGCACACTGTTGAAAAATGTTATCATCGACTCAATATGCGCTACATGGGAAGCGCACCCAAAGAAGGTGAACACTCTGCAGCTGCTTACATTGCAACCCCAGACATAATAAATGACCCAAGTTGGCTACTAGACAGTGGTGCCATTGTTGGGTTCCCAGAGTGA
Coding sequence (CDS)
ATGAAAGCAACCACCACCACCACACCTTTTGTCAATCCTCTCAGTATTGTTTTAACAGTAAAATTAGATGAGAGAAACTACTTACTTTGGAGATCCATGGTCCTTGTTGTTTTACGAGGACAGAAACTAGATGGCTATGTGTTGGGTACAGTTGCCCAACCATCAGAACTTATCCAAAGCTCTGGAATTGAAAATGTTGGTTCCATCGCAAATCCAGCCTATGAAACATGGATGTCCACAGATCAGTCACTCTTGGCTTGGTTGTATGGATCCATGTTACCTACCATTGCCTGTGATATTTTAAATCACAAAACATCTCGAGAGGTATGGAAGGCGCTGGAAAACCTCTATGGAGTGGTGGACAAGGCACGCATTACCCAACTCCAACGCAATCTCCAAACAACCCGAAAAAATCAGCAGAAGATGAGTGACTACCTATCTTCAATGAAGCAGATCGCAGATGGACTGCCCCTTGCTAGTGAACCCGTAAGTGAAAGTTCACTAATAACAAGCACACTTATGGGTCTAGATGTTGAATACATACCGGTAGCATGCCAGATAAATGCCAAAGAATCAATCACTTGGCAAGAAGTTTATTCAACACTCATCAATCAAGAGACTAGATCACAGAACCATGGGTATGACCAAAGTAGAAGCCAACGAAACAATGGTAGAGGTAGAGGTAGAGGTGGAAGAAATTTCTACCCAAGAGGAAACTCAAAGCCCACATGTGAAGTGTGCGGAAAGATGGGGCACACTGTTGAAAAATGTTATCATCGACTCAATATGCGCTACATGGGAAGCGCACCCAAAGAAGGTGAACACTCTGCAGCTGCTTACATTGCAACCCCAGACATAATAAATGACCCAAGTTGGCTACTAGACAGTGGTGCCATTGTTGGGTTCCCAGAGTGA
Protein sequence
MKATTTTTPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQSSGIENVGSIANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWKALENLYGVVDKARITQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVEYIPVACQINAKESITWQEVYSTLINQETRSQNHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAAYIATPDIINDPSWLLDSGAIVGFPE
Homology
BLAST of Lag0005395 vs. NCBI nr
Match:
XP_022157748.1 (uncharacterized protein LOC111024384 isoform X1 [Momordica charantia])
HSP 1 Score: 273.1 bits (697), Expect = 2.9e-69
Identity = 147/335 (43.88%), Postives = 198/335 (59.10%), Query Frame = 0
Query: 8 TPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQSSGIENVG 67
T F +PL VLTVKLD++NY LWR MVL VLRGQK DGYVLGT+A+P + + S E
Sbjct: 32 TSFGHPLGTVLTVKLDDKNYSLWRGMVLAVLRGQKFDGYVLGTLAKPPQFLVSPETEGTS 91
Query: 68 S--IANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWKALENLYGVVDKARI 127
NP Y W + DQ+LL WL+GSM P+IACD+++ ++SREVWKALE+LYG KARI
Sbjct: 92 DHLQVNPEYVEWQAVDQALLGWLFGSMTPSIACDVVDFRSSREVWKALEDLYGATSKARI 151
Query: 128 TQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVEYIPVAC 187
QL+ LQ T+KN KMS+YL MKQ ++ L LA EPV+ + L++ L GL+ EY+P+ C
Sbjct: 152 NQLRNVLQNTKKNSLKMSEYLGLMKQASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIVC 211
Query: 188 QINAKESITWQEVYSTLI------------------------------------------ 247
QI K+S +WQE+++TL+
Sbjct: 212 QIEGKDSTSWQELFATLVTFENTLMRLNIVSTATAEGISDGSXNYVHSKQNSVGNRQFHQ 271
Query: 248 NQETRSQNHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCGKMGHTVEKCYHRLNM 299
+Q + Q G S +NN RGRGRG + Y NSKP+C++CGK GH CY R +
Sbjct: 272 SQSGQGQGRGSYNSNDAKNNVRGRGRGRFSPYRGNNSKPSCQLCGKYGHIAAVCYKRFDE 331
BLAST of Lag0005395 vs. NCBI nr
Match:
XP_022157750.1 (uncharacterized protein LOC111024384 isoform X2 [Momordica charantia])
HSP 1 Score: 273.1 bits (697), Expect = 2.9e-69
Identity = 147/335 (43.88%), Postives = 198/335 (59.10%), Query Frame = 0
Query: 8 TPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQSSGIENVG 67
T F +PL VLTVKLD++NY LWR MVL VLRGQK DGYVLGT+A+P + + S E
Sbjct: 32 TSFGHPLGTVLTVKLDDKNYSLWRGMVLAVLRGQKFDGYVLGTLAKPPQFLVSPETEGTS 91
Query: 68 S--IANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWKALENLYGVVDKARI 127
NP Y W + DQ+LL WL+GSM P+IACD+++ ++SREVWKALE+LYG KARI
Sbjct: 92 DHLQVNPEYVEWQAVDQALLGWLFGSMTPSIACDVVDFRSSREVWKALEDLYGATSKARI 151
Query: 128 TQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVEYIPVAC 187
QL+ LQ T+KN KMS+YL MKQ ++ L LA EPV+ + L++ L GL+ EY+P+ C
Sbjct: 152 NQLRNVLQNTKKNSLKMSEYLGLMKQASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIVC 211
Query: 188 QINAKESITWQEVYSTLI------------------------------------------ 247
QI K+S +WQE+++TL+
Sbjct: 212 QIEGKDSTSWQELFATLVTFENTLMRLNIVSTATAEGISDGSXNYVHSKQNSVGNRQFHQ 271
Query: 248 NQETRSQNHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCGKMGHTVEKCYHRLNM 299
+Q + Q G S +NN RGRGRG + Y NSKP+C++CGK GH CY R +
Sbjct: 272 SQSGQGQGRGSYNSNDAKNNVRGRGRGRFSPYRGNNSKPSCQLCGKYGHIAAVCYKRFDE 331
BLAST of Lag0005395 vs. NCBI nr
Match:
XP_022142770.1 (uncharacterized protein LOC111012809 [Momordica charantia])
HSP 1 Score: 231.9 bits (590), Expect = 7.5e-57
Identity = 127/236 (53.81%), Postives = 158/236 (66.95%), Query Frame = 0
Query: 92 MLPTIACDILNHKTSREVWKALENLYGVVDKARITQLQRNLQTTRKNQQKMSDYLSSMKQ 151
M P IACD+L+ TSR+VWKALE+LY +KARI QL+ +LQTTRKNQ KMSDYLS+MKQ
Sbjct: 1 MSPIIACDVLSMATSRDVWKALEDLYETANKARINQLKTSLQTTRKNQLKMSDYLSTMKQ 60
Query: 152 IADGLPLASEPVSESSLITSTLMGLDVEYIPVACQINAKESITWQEVYSTLINQE----- 211
+AD L LA EP+S SSL++S L GL+ EY+ + CQINAKE+I+WQEV++TLI E
Sbjct: 61 LADCLTLAGEPISTSSLLSSVLTGLNAEYLQIICQINAKENISWQEVHATLITFENILIH 120
Query: 212 --------------------TRSQN---HGYDQSRSQRNNGRGRGRGGRNFYPRGN-SKP 271
+ SQN H Q R Q N RGR RGGR R N S+P
Sbjct: 121 LNNVSIADVSGPSANYTYNKSVSQNWNPHQQGQGRGQGRNSRGRNRGGRFQGQRSNSSRP 180
Query: 272 TCEVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAAYIATPDIINDPSWLLDSGA 299
TC+VCGK+GH CYHRLNM+YMG+ P+ G + AYI P++I DP+WL+DSGA
Sbjct: 181 TCQVCGKIGHLAVVCYHRLNMQYMGNTPQGGNQAPNAYITGPEVIIDPNWLIDSGA 236
BLAST of Lag0005395 vs. NCBI nr
Match:
TXG55646.1 (hypothetical protein EZV62_020902 [Acer yangbiense])
HSP 1 Score: 226.1 bits (575), Expect = 4.1e-55
Identity = 123/344 (35.76%), Postives = 186/344 (54.07%), Query Frame = 0
Query: 3 ATTTTTPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQS-- 62
++ ++PF N L+ +KLD +N++LW++MV +++G +LDG++ T P E + S
Sbjct: 30 SSNESSPFGNKLNQSFAIKLDRQNFILWKTMVTTIIKGHRLDGHLYSTRPCPPEFLPSPT 89
Query: 63 -SGIENVGSIANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWKALENLYGV 122
G+ + GS +NP YE W+ DQ L+ WLY SM +A ++ T+ +WKALENL+G
Sbjct: 90 TPGVSDSGSCSNPEYEKWLVNDQLLMGWLYSSMTENVALSVMGSTTAAGLWKALENLFGA 149
Query: 123 VDKARITQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVE 182
K++ ++ ++QTTRK M +YL+ MK AD L +A +P E+ L + L GLD E
Sbjct: 150 YSKSKANTIRTSIQTTRKGSSTMEEYLTQMKTWADSLAIAGDPYPENLLFANILAGLDSE 209
Query: 183 YIPVACQINAKESITWQEVYSTLI------------------------------------ 242
Y+P+ I A+E TWQE+Y TL+
Sbjct: 210 YMPIVVLIEAREHFTWQEIYDTLLSYDSKLEHINNVSAKGNLLSSPSAHLATNKPNNTPN 269
Query: 243 -----NQETRSQ--NHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCGKMGHTVEK 299
NQ+ +Q N ++ + GR RGRGGRN NS+PTC+VCGK GH+
Sbjct: 270 TNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGRN----NNSRPTCQVCGKFGHSASV 329
BLAST of Lag0005395 vs. NCBI nr
Match:
TXG67243.1 (hypothetical protein EZV62_008518 [Acer yangbiense])
HSP 1 Score: 223.8 bits (569), Expect = 2.0e-54
Identity = 123/352 (34.94%), Postives = 187/352 (53.12%), Query Frame = 0
Query: 3 ATTTTTPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQS-- 62
++ ++PF N L+ +KLD +N++LW++MV +++G +LDG++ T P E + S
Sbjct: 30 SSNESSPFGNKLNQSFAIKLDRQNFILWKTMVTTIIKGHRLDGHLYSTRPCPPEFLPSPT 89
Query: 63 ---------SGIENVGSIANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWK 122
G+ + GS +NP YE W+ DQ L+ WLY SM +A ++ T+ +WK
Sbjct: 90 TPGVPSPTTPGVSDSGSCSNPEYEKWLVNDQLLMGWLYSSMTENVALSVMGSTTAAGLWK 149
Query: 123 ALENLYGVVDKARITQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITS 182
ALENL+G K++ ++ ++QTTRK M +YL+ MK AD L +A +P E+ L +
Sbjct: 150 ALENLFGAYSKSKANTIRTSIQTTRKGSSTMEEYLTQMKTWADSLAIAGDPYPENLLFAN 209
Query: 183 TLMGLDVEYIPVACQINAKESITWQEVYSTLI---------------------------- 242
+L GLD EY+P+ I A+E TWQE+Y TL+
Sbjct: 210 SLAGLDSEYMPIVVLIEAREHFTWQEIYDTLLSYDSKLEHINNVSAKGNLLSSPSAHLAT 269
Query: 243 -------------NQETRSQ--NHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCG 299
NQ+ +Q N ++ + GR RGRGGRN NS+PTC+VCG
Sbjct: 270 NKPNNTPNTNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGRN----NNSRPTCQVCG 329
BLAST of Lag0005395 vs. ExPASy TrEMBL
Match:
A0A6J1DU77 (uncharacterized protein LOC111024384 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024384 PE=4 SV=1)
HSP 1 Score: 273.1 bits (697), Expect = 1.4e-69
Identity = 147/335 (43.88%), Postives = 198/335 (59.10%), Query Frame = 0
Query: 8 TPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQSSGIENVG 67
T F +PL VLTVKLD++NY LWR MVL VLRGQK DGYVLGT+A+P + + S E
Sbjct: 32 TSFGHPLGTVLTVKLDDKNYSLWRGMVLAVLRGQKFDGYVLGTLAKPPQFLVSPETEGTS 91
Query: 68 S--IANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWKALENLYGVVDKARI 127
NP Y W + DQ+LL WL+GSM P+IACD+++ ++SREVWKALE+LYG KARI
Sbjct: 92 DHLQVNPEYVEWQAVDQALLGWLFGSMTPSIACDVVDFRSSREVWKALEDLYGATSKARI 151
Query: 128 TQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVEYIPVAC 187
QL+ LQ T+KN KMS+YL MKQ ++ L LA EPV+ + L++ L GL+ EY+P+ C
Sbjct: 152 NQLRNVLQNTKKNSLKMSEYLGLMKQASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIVC 211
Query: 188 QINAKESITWQEVYSTLI------------------------------------------ 247
QI K+S +WQE+++TL+
Sbjct: 212 QIEGKDSTSWQELFATLVTFENTLMRLNIVSTATAEGISDGSXNYVHSKQNSVGNRQFHQ 271
Query: 248 NQETRSQNHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCGKMGHTVEKCYHRLNM 299
+Q + Q G S +NN RGRGRG + Y NSKP+C++CGK GH CY R +
Sbjct: 272 SQSGQGQGRGSYNSNDAKNNVRGRGRGRFSPYRGNNSKPSCQLCGKYGHIAAVCYKRFDE 331
BLAST of Lag0005395 vs. ExPASy TrEMBL
Match:
A0A6J1DTZ7 (uncharacterized protein LOC111024384 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024384 PE=4 SV=1)
HSP 1 Score: 273.1 bits (697), Expect = 1.4e-69
Identity = 147/335 (43.88%), Postives = 198/335 (59.10%), Query Frame = 0
Query: 8 TPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQSSGIENVG 67
T F +PL VLTVKLD++NY LWR MVL VLRGQK DGYVLGT+A+P + + S E
Sbjct: 32 TSFGHPLGTVLTVKLDDKNYSLWRGMVLAVLRGQKFDGYVLGTLAKPPQFLVSPETEGTS 91
Query: 68 S--IANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWKALENLYGVVDKARI 127
NP Y W + DQ+LL WL+GSM P+IACD+++ ++SREVWKALE+LYG KARI
Sbjct: 92 DHLQVNPEYVEWQAVDQALLGWLFGSMTPSIACDVVDFRSSREVWKALEDLYGATSKARI 151
Query: 128 TQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVEYIPVAC 187
QL+ LQ T+KN KMS+YL MKQ ++ L LA EPV+ + L++ L GL+ EY+P+ C
Sbjct: 152 NQLRNVLQNTKKNSLKMSEYLGLMKQASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIVC 211
Query: 188 QINAKESITWQEVYSTLI------------------------------------------ 247
QI K+S +WQE+++TL+
Sbjct: 212 QIEGKDSTSWQELFATLVTFENTLMRLNIVSTATAEGISDGSXNYVHSKQNSVGNRQFHQ 271
Query: 248 NQETRSQNHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCGKMGHTVEKCYHRLNM 299
+Q + Q G S +NN RGRGRG + Y NSKP+C++CGK GH CY R +
Sbjct: 272 SQSGQGQGRGSYNSNDAKNNVRGRGRGRFSPYRGNNSKPSCQLCGKYGHIAAVCYKRFDE 331
BLAST of Lag0005395 vs. ExPASy TrEMBL
Match:
A0A6J1CLV9 (uncharacterized protein LOC111012809 OS=Momordica charantia OX=3673 GN=LOC111012809 PE=4 SV=1)
HSP 1 Score: 231.9 bits (590), Expect = 3.6e-57
Identity = 127/236 (53.81%), Postives = 158/236 (66.95%), Query Frame = 0
Query: 92 MLPTIACDILNHKTSREVWKALENLYGVVDKARITQLQRNLQTTRKNQQKMSDYLSSMKQ 151
M P IACD+L+ TSR+VWKALE+LY +KARI QL+ +LQTTRKNQ KMSDYLS+MKQ
Sbjct: 1 MSPIIACDVLSMATSRDVWKALEDLYETANKARINQLKTSLQTTRKNQLKMSDYLSTMKQ 60
Query: 152 IADGLPLASEPVSESSLITSTLMGLDVEYIPVACQINAKESITWQEVYSTLINQE----- 211
+AD L LA EP+S SSL++S L GL+ EY+ + CQINAKE+I+WQEV++TLI E
Sbjct: 61 LADCLTLAGEPISTSSLLSSVLTGLNAEYLQIICQINAKENISWQEVHATLITFENILIH 120
Query: 212 --------------------TRSQN---HGYDQSRSQRNNGRGRGRGGRNFYPRGN-SKP 271
+ SQN H Q R Q N RGR RGGR R N S+P
Sbjct: 121 LNNVSIADVSGPSANYTYNKSVSQNWNPHQQGQGRGQGRNSRGRNRGGRFQGQRSNSSRP 180
Query: 272 TCEVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAAYIATPDIINDPSWLLDSGA 299
TC+VCGK+GH CYHRLNM+YMG+ P+ G + AYI P++I DP+WL+DSGA
Sbjct: 181 TCQVCGKIGHLAVVCYHRLNMQYMGNTPQGGNQAPNAYITGPEVIIDPNWLIDSGA 236
BLAST of Lag0005395 vs. ExPASy TrEMBL
Match:
A0A5C7HHE9 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020902 PE=4 SV=1)
HSP 1 Score: 226.1 bits (575), Expect = 2.0e-55
Identity = 123/344 (35.76%), Postives = 186/344 (54.07%), Query Frame = 0
Query: 3 ATTTTTPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQS-- 62
++ ++PF N L+ +KLD +N++LW++MV +++G +LDG++ T P E + S
Sbjct: 30 SSNESSPFGNKLNQSFAIKLDRQNFILWKTMVTTIIKGHRLDGHLYSTRPCPPEFLPSPT 89
Query: 63 -SGIENVGSIANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWKALENLYGV 122
G+ + GS +NP YE W+ DQ L+ WLY SM +A ++ T+ +WKALENL+G
Sbjct: 90 TPGVSDSGSCSNPEYEKWLVNDQLLMGWLYSSMTENVALSVMGSTTAAGLWKALENLFGA 149
Query: 123 VDKARITQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVE 182
K++ ++ ++QTTRK M +YL+ MK AD L +A +P E+ L + L GLD E
Sbjct: 150 YSKSKANTIRTSIQTTRKGSSTMEEYLTQMKTWADSLAIAGDPYPENLLFANILAGLDSE 209
Query: 183 YIPVACQINAKESITWQEVYSTLI------------------------------------ 242
Y+P+ I A+E TWQE+Y TL+
Sbjct: 210 YMPIVVLIEAREHFTWQEIYDTLLSYDSKLEHINNVSAKGNLLSSPSAHLATNKPNNTPN 269
Query: 243 -----NQETRSQ--NHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCGKMGHTVEK 299
NQ+ +Q N ++ + GR RGRGGRN NS+PTC+VCGK GH+
Sbjct: 270 TNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGRN----NNSRPTCQVCGKFGHSASV 329
BLAST of Lag0005395 vs. ExPASy TrEMBL
Match:
A0A5C7ID32 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_008518 PE=4 SV=1)
HSP 1 Score: 223.8 bits (569), Expect = 9.8e-55
Identity = 123/352 (34.94%), Postives = 187/352 (53.12%), Query Frame = 0
Query: 3 ATTTTTPFVNPLSIVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQS-- 62
++ ++PF N L+ +KLD +N++LW++MV +++G +LDG++ T P E + S
Sbjct: 30 SSNESSPFGNKLNQSFAIKLDRQNFILWKTMVTTIIKGHRLDGHLYSTRPCPPEFLPSPT 89
Query: 63 ---------SGIENVGSIANPAYETWMSTDQSLLAWLYGSMLPTIACDILNHKTSREVWK 122
G+ + GS +NP YE W+ DQ L+ WLY SM +A ++ T+ +WK
Sbjct: 90 TPGVPSPTTPGVSDSGSCSNPEYEKWLVNDQLLMGWLYSSMTENVALSVMGSTTAAGLWK 149
Query: 123 ALENLYGVVDKARITQLQRNLQTTRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITS 182
ALENL+G K++ ++ ++QTTRK M +YL+ MK AD L +A +P E+ L +
Sbjct: 150 ALENLFGAYSKSKANTIRTSIQTTRKGSSTMEEYLTQMKTWADSLAIAGDPYPENLLFAN 209
Query: 183 TLMGLDVEYIPVACQINAKESITWQEVYSTLI---------------------------- 242
+L GLD EY+P+ I A+E TWQE+Y TL+
Sbjct: 210 SLAGLDSEYMPIVVLIEAREHFTWQEIYDTLLSYDSKLEHINNVSAKGNLLSSPSAHLAT 269
Query: 243 -------------NQETRSQ--NHGYDQSRSQRNNGRGRGRGGRNFYPRGNSKPTCEVCG 299
NQ+ +Q N ++ + GR RGRGGRN NS+PTC+VCG
Sbjct: 270 NKPNNTPNTNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGRN----NNSRPTCQVCG 329
BLAST of Lag0005395 vs. TAIR 10
Match:
AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 55.5 bits (132), Expect = 8.9e-08
Identity = 57/252 (22.62%), Postives = 107/252 (42.46%), Query Frame = 0
Query: 16 IVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQSSGIENVGSIANPAYE 75
I +T+ L++ NY +WR + + + G++ G+ + P+ + + +
Sbjct: 22 IFVTLDLNKLNYDVWRELFETLCLSFGVLGHIDGS-STPTPMTE---------------K 81
Query: 76 TWMSTDQSLLAWLYGSMLPTIACDILN-HKTSREVWKALENLYGVVDKARITQLQRNLQT 135
W D + W+YG++ ++ I+ T+R++W +LENL+ +AR Q + L+T
Sbjct: 82 RWKERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRT 141
Query: 136 TRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVEYIPVACQINAKESI- 195
T + + +Y +K ++D L P+S+ L+ L GL +Y + I K
Sbjct: 142 TTIDDLSVHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFP 201
Query: 196 TWQEVYSTLINQETRSQNHG-------------------------YDQSRSQRNNGRGRG 241
++ E S L+ +E+R N Y Q N+ GRG
Sbjct: 202 SFTEARSMLLMEESRLSNKSKSSLSHTNHPSLSNVLFTVPRQQERYPQEYHNNNSNMGRG 257
BLAST of Lag0005395 vs. TAIR 10
Match:
AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 50.1 bits (118), Expect = 3.7e-06
Identity = 58/251 (23.11%), Postives = 100/251 (39.84%), Query Frame = 0
Query: 16 IVLTVKLDERNYLLWRSMVLVVLRGQKLDGYVLGTVAQPSELIQSSGIENVGSIANPAYE 75
I + + ++E NY WR + L + G++ GT+ N
Sbjct: 20 IPVMLDIEESNYDAWRELFLTHCLSFDVMGHIDGTLLP----------------TNANDV 79
Query: 76 TWMSTDQSLLAWLYGSMLP-TIACDILNHKTSREVWKALENLYGVVDKARITQLQRNLQT 135
W D + LYG++ P + TSR++W ++N + AR +L L+T
Sbjct: 80 NWQKRDGIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLDSELRT 139
Query: 136 TRKNQQKMSDYLSSMKQIADGLPLASEPVSESSLITSTLMGLDVEYIPVACQINAKESIT 195
+++DY MK++AD L PV++ +L+ L GL+ ++ + I ++
Sbjct: 140 KDIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPFP 199
Query: 196 WQEVYSTLINQE-------TRSQNHGYDQSRS---------------QRNNG-----RGR 239
+ +T++ +E + D S S QR+ G RGR
Sbjct: 200 SFDDAATMLQEEEDRLKRAIKPNPTHVDHSSSSTVLACSEAPPVTNFQRSGGNQMGYRGR 254
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022157748.1 | 2.9e-69 | 43.88 | uncharacterized protein LOC111024384 isoform X1 [Momordica charantia] | [more] |
XP_022157750.1 | 2.9e-69 | 43.88 | uncharacterized protein LOC111024384 isoform X2 [Momordica charantia] | [more] |
XP_022142770.1 | 7.5e-57 | 53.81 | uncharacterized protein LOC111012809 [Momordica charantia] | [more] |
TXG55646.1 | 4.1e-55 | 35.76 | hypothetical protein EZV62_020902 [Acer yangbiense] | [more] |
TXG67243.1 | 2.0e-54 | 34.94 | hypothetical protein EZV62_008518 [Acer yangbiense] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DU77 | 1.4e-69 | 43.88 | uncharacterized protein LOC111024384 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1DTZ7 | 1.4e-69 | 43.88 | uncharacterized protein LOC111024384 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1CLV9 | 3.6e-57 | 53.81 | uncharacterized protein LOC111012809 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
A0A5C7HHE9 | 2.0e-55 | 35.76 | Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020902 PE=4 SV=1 | [more] |
A0A5C7ID32 | 9.8e-55 | 34.94 | Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_008518 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G48050.1 | 8.9e-08 | 22.62 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |
AT1G34070.1 | 3.7e-06 | 23.11 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |