Lag0005230 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0005230
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Serine/threonine-protein phosphatase
Location	chr6: 12363827 .. 12365642 (-)
RNA-Seq Expression	Lag0005230
Synteny	Lag0005230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTCAACATTCACAATATGGTTGGTTTCCTTGTCACCTTTTTTCCCTAAGAAAAATATTATTTTGTTTGATTATAAAGTTTTTTCCATTTATTTTTCTTATGTAGTTCTTTTCCTCTTTCCCCCAAATTTTATCAGGTCATTGCCCATCTCTTAAAACCTCGTGGATGGAAACCTCCTGTTAGCCGACAATTCCTTTTATATTCTAATGAAATAGCTGACCTTTGTGAGAGTGCTGAGAAGATATTTTCATCACAACCAAGTGTTCTAGTGCTCAAGGCTCCAATAAAGATATTTGGTGATCTACATGGTCAGTTTGGGGATCTTATGCGCCTTTTTGATGAGTATGGTGCACCTTCTACAGCAGGAGAACATTGCGTAAGTAATTGGCTTATATTAACTTCGTAGTATTATTTATTCCCGGAAGATCACAAACACCTTCTCTTTTATCAGAAAAAACTAACATTTCTTCGAGGCTGAGAATATTCATTTTTGACGACATGATATTAATATGCCCCTAGTTTATGTTAGAAGAGAGAGAAATGTGAGAGCTTAGGGATAATGATTAAAGGCAGAATGGTCTTGTGTTGCACGAGAAGGTTGCTTTCTCTGTGTGCAGGTTGTGTTTGTACTGCAGTGCTTGTGTTTGCTGATCTTGAGTGCTTGTTAGTTTCTATATTTTCTATAGTACATACTGAATTTTTAAGAAGTGAGAAAAGTCTGATTATTTCAATTCTTCTCTTTGGACATATGGTTTAGTCTGTTTTTTCAAAATCTTATTTGTAGGAGAACACTTTAAGCTGGTATATAAATGTGTCTACTATCTACATCGTGGTTCTGGCATTGATACTTTTTGAAGAAAGATGTCAACATGGTTTTGTAATGCAATTTTTGTTTTTATTTCTTCCCTTCTTTGGAGGTCTGGCTATTTATTTCTAGCCTTTGGATCTCCTAATAATTTTTTTTCTTACAGTTTGATTTATCGTAGGAGGACAATGAATTTTGAGGAGAGTTATTATAAATGATTCTATTATGCACAGAAGGTTAGTTTGTATACTTCAAATCATCATTTTTTGTTTATAAACCCTGTTAATATCCTCTGTTTTAGCTTTCAGAACTTAGTTTGGATTTTGAAAATACTTGAGGTAGATATCCAAACAAGGTAGCACATAGTTTTTGGTTATTGGCTGTTGCAACCCTGTAAACAATGGCACTAATGGTTATTTCCAACTCACTCTCATTGCCAATGTACTTGCTTTCTTATTCACTTTTATGTTCTTTGAGCATATGTTTTGATGGAGTTCTTTTAATTTTTGGAATAGTTGTGGTGGTCCTCCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCAAAACTAAGCAAGTAGTTATAATTGTTTCTGTTTTGAAGAGTGTAAGTGGTTTGCTAAGCTCTTTGTAAATTGAGCAGGCATTACAAGCAAGTTGGGAGCCAACACAATCAAGTCACGACTACAGATTCCCCTAGCAGTCGTATGTGAATTTTGCAGCAACTGAGGCTAGCAGTTCTTGCTAAAAGGACAATGGAAAAAAAAATATGATTTACCTACTCTTCATTTTCACAAAAATGGTACCTACCAGGATGAAGACTCATGGTAGGACATCATTTTTTGTTCTTTCATCAACCGCGAAATTATCATTTTTTCATTATTAGATTTTTTTTTCTTATCTCATTCTTATGGGTGGAATTTTTTGCTTTGCAGGAAGCGATTGATGAAAATGGATATTCTCGAAAAGGAGCTCGGAGAGGAACTTGGCCGGAAAGAGCGTAG

mRNA sequence

ATGGCATTCAACATTCACAATATGGTCATTGCCCATCTCTTAAAACCTCGTGGATGGAAACCTCCTGTTAGCCGACAATTCCTTTTATATTCTAATGAAATAGCTGACCTTTGTGAGAGTGCTGAGAAGATATTTTCATCACAACCAAGTGTTCTAGTGCTCAAGGCTCCAATAAAGATATTTGGTGATCTACATGGTCAGTTTGGGGATCTTATGCGCCTTTTTGATGAGTATGGTGCACCTTCTACAGCAGGAGAACATTGCGTTGTGTTTGTACTGCAGTGCTTGTGTTTGCTGATCTTGAGTGCTTGCATTACAAGCAAGTTGGGAGCCAACACAATCAAGTCACGACTACAGATTCCCCTAGCAGTCGAAGCGATTGATGAAAATGGATATTCTCGAAAAGGAGCTCGGAGAGGAACTTGGCCGGAAAGAGCGTAG

Coding sequence (CDS)

ATGGCATTCAACATTCACAATATGGTCATTGCCCATCTCTTAAAACCTCGTGGATGGAAACCTCCTGTTAGCCGACAATTCCTTTTATATTCTAATGAAATAGCTGACCTTTGTGAGAGTGCTGAGAAGATATTTTCATCACAACCAAGTGTTCTAGTGCTCAAGGCTCCAATAAAGATATTTGGTGATCTACATGGTCAGTTTGGGGATCTTATGCGCCTTTTTGATGAGTATGGTGCACCTTCTACAGCAGGAGAACATTGCGTTGTGTTTGTACTGCAGTGCTTGTGTTTGCTGATCTTGAGTGCTTGCATTACAAGCAAGTTGGGAGCCAACACAATCAAGTCACGACTACAGATTCCCCTAGCAGTCGAAGCGATTGATGAAAATGGATATTCTCGAAAAGGAGCTCGGAGAGGAACTTGGCCGGAAAGAGCGTAG

Protein sequence

MAFNIHNMVIAHLLKPRGWKPPVSRQFLLYSNEIADLCESAEKIFSSQPSVLVLKAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGEHCVVFVLQCLCLLILSACITSKLGANTIKSRLQIPLAVEAIDENGYSRKGARRGTWPERA

Homology

[Close]

BLAST of Lag0005230 vs. NCBI nr
Match: XP_022141902.1 (serine/threonine-protein phosphatase BSL3 [Momordica charantia])

HSP 1 Score: 154.1 bits (388), Expect = 9.5e-34
Identity = 72/83 (86.75%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 4   NIHNMVIAHLLKPRGWKPPVSRQFLLYSNEIADLCESAEKIFSSQPSVLVLKAPIKIFGD 63
           ++   VIAHLLKPRGWKPPV RQF L SNEIADLCESAEKIFSS+PSVL LKAPIKIFGD
Sbjct: 654 SVPKKVIAHLLKPRGWKPPVRRQFFLDSNEIADLCESAEKIFSSEPSVLELKAPIKIFGD 713

Query: 64  LHGQFGDLMRLFDEYGAPSTAGE 87
           LHGQFGDLMRLFDEYGAPSTAG+
Sbjct: 714 LHGQFGDLMRLFDEYGAPSTAGD 736

[Close]

BLAST of Lag0005230 vs. NCBI nr
Match: XP_022987295.1 (serine/threonine-protein phosphatase BSL3-like [Cucurbita maxima])

HSP 1 Score: 154.1 bits (388), Expect = 9.5e-34
Identity = 72/83 (86.75%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 4   NIHNMVIAHLLKPRGWKPPVSRQFLLYSNEIADLCESAEKIFSSQPSVLVLKAPIKIFGD 63
           ++   VIAHLLKPRGWKPPV RQF L SNEIADLCESAEKIFSS+PSVL LKAPIKIFGD
Sbjct: 654 SVPKTVIAHLLKPRGWKPPVRRQFFLDSNEIADLCESAEKIFSSEPSVLELKAPIKIFGD 713

Query: 64  LHGQFGDLMRLFDEYGAPSTAGE 87
           LHGQFGDLMRLFDEYGAPSTAG+
Sbjct: 714 LHGQFGDLMRLFDEYGAPSTAGD 736

[Close]

BLAST of Lag0005230 vs. NCBI nr
Match: XP_023515629.1 (serine/threonine-protein phosphatase BSL3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 154.1 bits (388), Expect = 9.5e-34
Identity = 72/83 (86.75%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 4   NIHNMVIAHLLKPRGWKPPVSRQFLLYSNEIADLCESAEKIFSSQPSVLVLKAPIKIFGD 63
           ++   VIAHLLKPRGWKPPV RQF L SNEIADLCESAEKIFSS+PSVL LKAPIKIFGD
Sbjct: 654 SVPKTVIAHLLKPRGWKPPVRRQFFLDSNEIADLCESAEKIFSSEPSVLELKAPIKIFGD 713

Query: 64  LHGQFGDLMRLFDEYGAPSTAGE 87
           LHGQFGDLMRLFDEYGAPSTAG+
Sbjct: 714 LHGQFGDLMRLFDEYGAPSTAGD 736

[Close]

BLAST of Lag0005230 vs. NCBI nr
Match: XP_010045170.1 (serine/threonine-protein phosphatase BSL3 [Eucalyptus grandis] >KCW87326.1 hypothetical protein EUGRSUZ_B03812 [Eucalyptus grandis])

HSP 1 Score: 152.9 bits (385), Expect = 2.1e-33
Identity = 71/83 (85.54%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 4   NIHNMVIAHLLKPRGWKPPVSRQFLLYSNEIADLCESAEKIFSSQPSVLVLKAPIKIFGD 63
           N+   VIAHLLKPRGWKPPV RQF L  NEIADLC+SAEKIFSS+PSVL LKAPIKIFGD
Sbjct: 643 NVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAEKIFSSEPSVLQLKAPIKIFGD 702

Query: 64  LHGQFGDLMRLFDEYGAPSTAGE 87
           LHGQFGDLMRLFDEYGAPSTAG+
Sbjct: 703 LHGQFGDLMRLFDEYGAPSTAGD 725

[Close]

BLAST of Lag0005230 vs. NCBI nr
Match: KAG6590130.1 (Serine/threonine-protein phosphatase BSL2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152.9 bits (385), Expect = 2.1e-33
Identity = 71/83 (85.54%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 4   NIHNMVIAHLLKPRGWKPPVSRQFLLYSNEIADLCESAEKIFSSQPSVLVLKAPIKIFGD 63
           ++   VIAHLLKPRGWKPPV RQF L SNEIADLCESAEKIFSS+PSVL LKAPIKIFGD
Sbjct: 654 SVPKTVIAHLLKPRGWKPPVRRQFFLDSNEIADLCESAEKIFSSEPSVLELKAPIKIFGD 713

Query: 64  LHGQFGDLMRLFDEYGAPSTAGE 87
           LHGQFGDLMRLFDEYG+PSTAG+
Sbjct: 714 LHGQFGDLMRLFDEYGSPSTAGD 736

[Close]

BLAST of Lag0005230 vs. ExPASy Swiss-Prot
Match: Q9SHS7 (Serine/threonine-protein phosphatase BSL3 OS=Arabidopsis thaliana OX=3702 GN=BSL3 PE=1 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-34
Identity = 66/83 (79.52%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 4   NIHNMVIAHLLKPRGWKPPVSRQFLLYSNEIADLCESAEKIFSSQPSVLVLKAPIKIFGD 63
           ++   V+AHLLKPRGWKPPV RQF L  NEIADLC+SAE+IFSS+P+VL LKAPIKIFGD
Sbjct: 650 SVPKKVVAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGD 709

Query: 64  LHGQFGDLMRLFDEYGAPSTAGE 87
           LHGQFGDLMRLFDEYG+PSTAG+
Sbjct: 710 LHGQFGDLMRLFDEYGSPSTAGD 732

[Close]

BLAST of Lag0005230 vs. ExPASy Swiss-Prot
Match: Q9SJF0 (Serine/threonine-protein phosphatase BSL2 OS=Arabidopsis thaliana OX=3702 GN=BSL2 PE=1 SV=2)

HSP 1 Score: 146.4 bits (368), Expect = 2.6e-34
Identity = 66/83 (79.52%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 4   NIHNMVIAHLLKPRGWKPPVSRQFLLYSNEIADLCESAEKIFSSQPSVLVLKAPIKIFGD 63
           ++   VIAHLLKPRGWKPPV RQF L  NEIADLC+SAE+IF+S+P+VL LKAPIKIFGD
Sbjct: 661 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFGD 720

Query: 64  LHGQFGDLMRLFDEYGAPSTAGE 87
           LHGQFGDLMRLFDEYG+PSTAG+
Sbjct: 721 LHGQFGDLMRLFDEYGSPSTAGD 743

[Close]

BLAST of Lag0005230 vs. ExPASy Swiss-Prot
Match: Q2QM47 (Serine/threonine-protein phosphatase BSL2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=BSL2 PE=2 SV=2)

HSP 1 Score: 146.4 bits (368), Expect = 2.6e-34
Identity = 68/83 (81.93%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 4   NIHNMVIAHLLKPRGWKPPVSRQFLLYSNEIADLCESAEKIFSSQPSVLVLKAPIKIFGD 63
           ++   VIA LLKPRGWKPPV RQF L  NEIADLC+SAE+IFSS+PSVL LKAPIKIFGD
Sbjct: 652 SVPKKVIASLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGD 711

Query: 64  LHGQFGDLMRLFDEYGAPSTAGE 87
           LHGQFGDLMRLFDEYGAPSTAG+
Sbjct: 712 LHGQFGDLMRLFDEYGAPSTAGD 734

[Close]

BLAST of Lag0005230 vs. ExPASy Swiss-Prot
Match: Q8L7U5 (Serine/threonine-protein phosphatase BSL1 OS=Arabidopsis thaliana OX=3702 GN=BSL1 PE=1 SV=2)

HSP 1 Score: 123.2 bits (308), Expect = 2.4e-27
Identity = 55/82 (67.07%), Postives = 67/82 (81.71%), Query Frame = 0


Query: 5   IHNMVIAHLLKPRGWKPPVSRQFLLYSNEIADLCESAEKIFSSQPSVLVLKAPIKIFGDL 64
           +H  VIA LL+PR WKPP +R+F L S E+ +LC +AE+IF  + +VL LKAPIK+FGDL
Sbjct: 526 LHKKVIAALLRPRNWKPPGNRKFFLDSYEVGELCYAAEQIFMHEQTVLQLKAPIKVFGDL 585

Query: 65  HGQFGDLMRLFDEYGAPSTAGE 87
           HGQFGDLMRLFDEYG PSTAG+
Sbjct: 586 HGQFGDLMRLFDEYGFPSTAGD 607

[Close]

BLAST of Lag0005230 vs. ExPASy Swiss-Prot
Match: Q60EX6 (Serine/threonine-protein phosphatase BSL1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=BSL1 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.1e-27
Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 5   IHNMVIAHLLKPRGWKPPVSRQFLLYSNEIADLCESAEKIFSSQPSVLVLKAPIKIFGDL 64
           +H  VI+ LLKPR W+ P  R F L S E+ +LC +AE+IF  +P+VL LKAPIK+FGDL
Sbjct: 528 LHKKVISFLLKPRNWRAPAERAFFLDSYEVGELCYAAEQIFMQEPTVLQLKAPIKVFGDL 587

Query: 65  HGQFGDLMRLFDEYGAPSTAGE 87
           HGQFGDLMRLFDEYG PSTAG+
Sbjct: 588 HGQFGDLMRLFDEYGYPSTAGD 609

The following BLAST results are available for this feature:

BLAST of Lag0005230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141902.1	9.5e-34	86.75	serine/threonine-protein phosphatase BSL3 [Momordica charantia]	[more]
XP_022987295.1	9.5e-34	86.75	serine/threonine-protein phosphatase BSL3-like [Cucurbita maxima]	[more]
XP_023515629.1	9.5e-34	86.75	serine/threonine-protein phosphatase BSL3-like [Cucurbita pepo subsp. pepo]	[more]
XP_010045170.1	2.1e-33	85.54	serine/threonine-protein phosphatase BSL3 [Eucalyptus grandis] >KCW87326.1 hypot...	[more]
KAG6590130.1	2.1e-33	85.54	Serine/threonine-protein phosphatase BSL2, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of Lag0005230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHS7	1.5e-34	79.52	Serine/threonine-protein phosphatase BSL3 OS=Arabidopsis thaliana OX=3702 GN=BSL...	[more]
Q9SJF0	2.6e-34	79.52	Serine/threonine-protein phosphatase BSL2 OS=Arabidopsis thaliana OX=3702 GN=BSL...	[more]
Q2QM47	2.6e-34	81.93	Serine/threonine-protein phosphatase BSL2 homolog OS=Oryza sativa subsp. japonic...	[more]
Q8L7U5	2.4e-27	67.07	Serine/threonine-protein phosphatase BSL1 OS=Arabidopsis thaliana OX=3702 GN=BSL...	[more]
Q60EX6	3.1e-27	65.85	Serine/threonine-protein phosphatase BSL1 homolog OS=Oryza sativa subsp. japonic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029052	Metallo-dependent phosphatase-like	GENE3D	3.60.21.10		coord: 8..92 e-value: 2.6E-16 score: 61.0
IPR029052	Metallo-dependent phosphatase-like	SUPERFAMILY	56300	Metallo-dependent phosphatases	coord: 14..92
IPR031675	Serine-threonine protein phosphatase, N-terminal	PFAM	PF16891	STPPase_N	coord: 9..54 e-value: 2.6E-7 score: 31.0
None	No IPR available	PANTHER	PTHR46422	SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3	coord: 5..88
None	No IPR available	PANTHER	PTHR46422:SF9	SERINE/THREONINE-PROTEIN PHOSPHATASE	coord: 5..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0005230.1	Lag0005230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009742	brassinosteroid mediated signaling pathway
biological_process	GO:0006470	protein dephosphorylation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0106306	protein serine phosphatase activity
molecular_function	GO:0106307	protein threonine phosphatase activity