Lag0005065 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0005065
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	exosome complex exonuclease RRP46 homolog
Location	chr6: 10174871 .. 10179933 (+)
RNA-Seq Expression	Lag0005065
Synteny	Lag0005065

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGGCTGGCGGATTGCGACAACGGCTGAGGCATCGCCGGCAGATTGCGACAACAATTGGATCGTTGCCGGTGGGCTGAAAAGGTTTCTGCACAGTGGAAGGATACCAAGCGGTTGATTGTAGAAGAAGATTAGGGCACGCAGGAGTTGAAGAGATTTTCTTTAATATCTCAATATGTTTTAAACAATTTTAACATTTATTCAACATTTTAGTTTTCTAATTAATTTTTCAATAAATAAAATAGCCATGTCATCTCATCCATGTCACGAACATAAGATAGGGACCATTTAGAATAGTTTTATAAATCTGGTGGACTAAAATGTATCTTTTGAAACTTTAGAGACCAAATAGACATAAAGTCCAAACTTCGGGGACCAAAAGTGCATTTTGTCCTAAAATTAAAGGGTAAAATACCTTTTTGGTCCCTCATGTTTCGGGTTAGTTTCTAATAGGTCCCTACGTTTAAAAATTGAACAATCAAGTCCCTACTGTTCAGAAAATGTTTCTATTGAGTCCCTGAAGTACTGATGTGACAATTTAAAATAATAAAATATTGATCTTTAATTAAAATAATAATATAATAACAATATAATAATAAAAATGTAAAAAAAGTTCTGGTGGCGGCAGTGTGGGATCTCCGACGACGGTAGGGAGGAGCTCCGGCGGTGGGAAGGAGAAGAGAGAGAAGGTGGGGGAAAGAGGAGAGAGAGGAAGGTGGGGGAAGAGGGTTTCGGGGTGGGGAGAGAGAGGAGGGAGTGATTTTTTTTTAATAATAATAATAATTATTATTATTTTATCATTATATTGTTTTTTTTACAATTTTATTATTATATTGTCATTATATTATTATTTTAATTAAAAATAAATATTTTATTATTTTAAATTGACACATCAGCACTTCAGGGACTCAATAGAAACATTTTCTGAACAGTAGGGACTTGATTGTTCGATTTTTAAACTTAGGGACCTATTAGAAACTAACCCGAAACATGAGGGACCAAAAATGTATTTTACCCAAAATTAAAAAAAACAAAAAGACACTTTTACCCTAGTCTCTTCTTCTCCTTCAGTCTCTTTCAGTCCCTTCTCCGAGTATACTCAGACCCGGCGGCGGCGCCCCCAAAATCTCTCCACCTCTCTGCTTTCTCTCCTCCGCCATCTCTCTCTCTCTCTCTCTCTCTCTCTTCACCGACTCTTCATAGCAGTTCAGCGGCTTTCTCGCTTCATCGCAAGAAACATAAATCCACGACAACATACCGACTGAGTTTGAATTAATCTCAACTGTAAAAAGAACCTCAACTTCTTCTAATCTTTCGAAACGACTGACCATGGAGATAGACAGAGATGATGGCCGTACCCCCAGCCAGTTGAGACCACTTGCTTGTTCTTGCAATGTTCTTAATCGTGCTCATGGCTCCGCCAGTTGGTCGCAAGGTCCCTCCATCTTCCAGCGCCTTCTCTTAGTTCTTGTTTCATTGGTTTGTGAAGTTGGTTTGGTTTTGGGAAATTTTCTTATGAGTGGTTTGTTTAATTTTGATTTTGTAGGCGATACGAAAGTTCTTGCTGCAGTTTATGGACCTAAAGCGGGAACAAAGAAGAATGAAAACCCTGAGAAAGCTTCAATTGAGGTTTTATGGAAACCCAAGACAGGGCAAATTGGTAAGCTTCTTGATCTTCTTATGTACTTGTTTTCTCTTATCTCTGATTCATATGATAAATCTCTCATGCCTTGAGTATACATATACTAGGGATTATCATAATATTGGCACTTCAATAAGTTTCTTACATATTAATGGCATTGACAATGTGGCTTTCTTTGGACATAGTGTACTATTTTATACTTTAGTTGAATTTGAAGCAGGCGATGGATGACATTCTTTGAATCTCTTTAATGCATTTTGTTTTTCTTTTACCTTTTATGATGCATTAGGAAAACCGGAAAGGGAGTGTGAGATGATATTGAAGAGGACATTGCAGAGTATTTGCATATTAACTATTAATCCCAATACCACCACAACCATTGTTGTTCAGGTGAGTCTAATTTTTTCCCCTTTCTGCCACAACGTGCCTGTGACATGCTACATGTCTCTGTCTTCCTTGTTACCGTCCTGTTATCAATGCTTGTCATGCATATACACCCTAAAATCTCTATAATACTTCTTTCATGCTGAATTTTTAATATTTATGTAACATATATCCAATAAGTATCTCAAAATGTCGTTGAAGGTAAGAAACCTCTGGTTGTAAACCAAGATACAAGATCCACAACCTTAAATTTTAAAATGTATGTTATAGTTATTCAGTTTTCTTTTTACGGTTCCGATTTATTTTTCTTTTTCTTTACCTCCTTCTCTCTCTACATACATACATTCATATATATATATATATTTATATTTATATAATAATATTGTTACTCATGATGGGGACTTGGCAAATTCCCTTTATTCCAATCTTCCTTTAGTCCCAACCAACCCATTTATTAAGATTTTTTGCTAGACTACTACTGACATGTATATTTACATGGCCAGCGCATGTTACATCATTTTGTTTTATATTTGAAACTTCAAAATAATATATATAAGAAATAATTAGCCGCTACATGCTATTATGTTACTTGAACTTATGTTTCTGGAAAGTGCAAATATTCTAAAACCATCAAGGAAGACCTCCATGCTAATTTGTACATTGATGGAAATTTGTTCGACAGTTGTTCATTCCCATATCATGAAAAATATTTTGGACTGTCAGCTTTGGAATACGTTCTATTTAAGGAATTTATATTACTAATGTTACAACTAGTTTCTTATCTCAAATACATTGATATTTCCCCCCATAATTGCAGGTTATTCATGATGATGGAGCTGTATCCCTTGTGATTTAATACCTTGTTTTTAGATTACTAAAGATAATTTTAGGAAAAGATAAGTATGTTAGGACACATAATTCATGATCCTATTCAAACTGAGTTACTAACGGAATGTTCTCCTTGAAAGTTGAACTTGGGTTCAAGTCCTCGCATTTACAGTATGGGTTTGGGTGCTGTAACCAACTATGCTATATAAGGGATGATTCACATTAATATAACCACAAGGGACTACTGTCGTATCAAGGAAAAGGGAAGAACTAGGGCCTACTTATCAACATGGACAGTTCTTTTATCTGTTCCTTGGGTAAAAAATCTAGATATTCTGTGAACCATACTAAGGACGGTGGAAGACCTCTCCTAATATATGACATGCATTTTGCTTTTAAATTTGGAGTGGCATTCTTTTAAAATGTCTAAATGTCACTATGAAAAATATTTTTGACCTTGTATGGGTTATGCTGGTATTATGTCAGTATGTATAATACCATGGGCATTATTTTTTCTTTATTGGCAATACATTTCTTGAAATATCTTCATGAAGAACCTCTTTGACAGAGTCCTCAAATAGCTTCTTCCTTGTGCAATTAATGCATCATGTGCCGCCTTAGTAGATGCTGGAATTCCTTTAAATCATCTTGCTGGTAATCAAATTTGATGCTCTTATTATTCATTTCTTCACTTGGTTGGCACTGACTACTCTGCACTGCATATTGCAGTTGCAATTTCCTGTTGTTTGTCTGAGAGTGGATATGTTATTTTGGATCCAACCAAGCTAGAGGAGCAGGTCAGTAATCTACATTTATTGAATTTATAAGACTTCCTCTGGCAATGCTTGTCCAATTTTGCAGTTACATTTTGTATGCATGATAAATAGCACTTGTATGGTAAATTGCTCATGGCAGGGGTTGGCCAAGTAGTTTCATCTTATTAAATTCATCAAAGAAAATGGGAAAAGTGAAAATTGTCGAATTTTATTATGAAAGGAGTGAGTTTTGAAGAAAAGTGAATTGAAATTGCAGAAAATGAAGGCATTTGTACATTTGGTCTTTCCGAACTTACCTGTCTCAGTAATTCCTGAAGGATCCACACAAGTTGCAGGTGAACCTCTGGAGCATGGAATAATAACATCTGTAACTCAGGGTGCAATGTCAGGTATATCATACGCAAAACCTATCTATTTTTCAGTAGTCGTAATTGAAACTTGCATGTCTGTACTAAGTTTTGATGTATATTAGGATGCCAGTGTCTCAACAAGCTTATACTGAGTATTCACTTTTATATTGTGGTAATGATCCCATACTGTTATACCAAGAACTAAATGCATCTCTAAGGTTAAAGCACTGTGATACAATATGCTTGAGGCACCAACACATTTTGGACACATATCTGACTCACCCCCATACACTGAGGCAGTCTCCACATGTCTATTGTCACACATGGCAGGTTTTTTTTTTTTTTTTTTTCTTTTTCTTTAATTCATGCCCTTCCATTTCTTGACACCCTGGCGCATTTCTTAGATGGACACAATAGATCAGTTATTAGCCAATGGTTACGGCACCCTTCTCTCATCATGTCATGTACTTTCTTTCTAATGCTGTGTTGTGTTTGAAAATGTATTTGGATCTTATTATAGCATGAAGGGTTAAAACTGGTACAGTTAATCTCCTCTTAAATTGCATATGGAAGCTGAAAAAATGTGAATGTTAGATGGAAAAATAAGAGTGGAATCTAAGTTTGTTGTTGTTTAATGTTTAAAGTGGATGATTATATACACTGCCTGGAACGGGGGCGTGCTGCAACTGCAAAATGTCTGCTTTTTTGAGGAGAAGCTTGCAGCCCCAACTCCCAACGGATTCCTCAAAAGCTGGCTGATCGGATGCAAGTCCTTGTCTGTGTTGTGCTCTACGACTAAATCTGGCTGGGAAGGTATCGTCTGTTGTATGATTTATTTTTCTGTAACACCAAATCCTTGCTAGTTGGGTCTTTCAGGGCTTTCTAACCCAGTGCTGTAACGGGGCATTCATTTTAATGATGATAAAACGTTCAAAGTGGATATTATTGTTGCATTATATGTCTACCTTTTTTCTCTTCTATTTTTTGGTATGCAATTGTTAGATATTCTAAATTTAAAATGATGTTGTCTTCAAAGTGCTCTTTCGAAATAGGCAAATTTCCCGGCTCGGGATCGATTTAG

mRNA sequence

ATGGCAGGCTGGCGGATTGCGACAACGGCTGAGGCATCGCCGGCAGATTGCGACAACAATTGGATCGTTGCCGGTGGGCTGAAAAGTGTGGGATCTCCGACGACGGTAGGGAGGAGCTCCGGCGGTGGGAAGGAGAAGAGAGAGAAGGTGGGGGAAAGAGGAGAGAGAGGAAGAACCTCAACTTCTTCTAATCTTTCGAAACGACTGACCATGGAGATAGACAGAGATGATGGCCGTACCCCCAGCCAGTTGAGACCACTTGCTTGTTCTTGCAATGTTCTTAATCGTGCTCATGGCTCCGCCAGTTGGTCGCAAGGCGATACGAAAGTTCTTGCTGCAGTTTATGGACCTAAAGCGGGAACAAAGAAGAATGAAAACCCTGAGAAAGCTTCAATTGAGGTTTTATGGAAACCCAAGACAGGGCAAATTGGAAAACCGGAAAGGGAGTGTGAGATGATATTGAAGAGGACATTGCAGAGTATTTGCATATTAACTATTAATCCCAATACCACCACAACCATTGTTGTTCAGGTTATTCATGATGATGGAGCTCTTCTTCCTTGTGCAATTAATGCATCATGTGCCGCCTTAGTAGATGCTGGAATTCCTTTAAATCATCTTGCTGTTGCAATTTCCTGTTGTTTGTCTGAGAGTGGATATGTTATTTTGGATCCAACCAAGCTAGAGGAGCAGAAAATGAAGGCATTTGTACATTTGGTCTTTCCGAACTTACCTGTCTCAGTAATTCCTGAAGGATCCACACAAGTTGCAGGTGAACCTCTGGAGCATGGAATAATAACATCTGTAACTCAGGGTGCAATGTCAGGATGCCAGTGTCTCAACAAGCTTATACTGAGTATTCACTTTTATATTGTGTGGATGATTATATACACTGCCTGGAACGGGGGCGTGCTGCAACTGCAAAATGTCTGCTTTTTTGAGGAGAAGCTTGCAGCCCCAACTCCCAACGGATTCCTCAAAAGCTGGCTGATCGGATGCAAGTCCTTGTCTGTGTTGTGCTCTACGACTAAATCTGGCTGGGAAGGCAAATTTCCCGGCTCGGGATCGATTTAG

Coding sequence (CDS)

ATGGCAGGCTGGCGGATTGCGACAACGGCTGAGGCATCGCCGGCAGATTGCGACAACAATTGGATCGTTGCCGGTGGGCTGAAAAGTGTGGGATCTCCGACGACGGTAGGGAGGAGCTCCGGCGGTGGGAAGGAGAAGAGAGAGAAGGTGGGGGAAAGAGGAGAGAGAGGAAGAACCTCAACTTCTTCTAATCTTTCGAAACGACTGACCATGGAGATAGACAGAGATGATGGCCGTACCCCCAGCCAGTTGAGACCACTTGCTTGTTCTTGCAATGTTCTTAATCGTGCTCATGGCTCCGCCAGTTGGTCGCAAGGCGATACGAAAGTTCTTGCTGCAGTTTATGGACCTAAAGCGGGAACAAAGAAGAATGAAAACCCTGAGAAAGCTTCAATTGAGGTTTTATGGAAACCCAAGACAGGGCAAATTGGAAAACCGGAAAGGGAGTGTGAGATGATATTGAAGAGGACATTGCAGAGTATTTGCATATTAACTATTAATCCCAATACCACCACAACCATTGTTGTTCAGGTTATTCATGATGATGGAGCTCTTCTTCCTTGTGCAATTAATGCATCATGTGCCGCCTTAGTAGATGCTGGAATTCCTTTAAATCATCTTGCTGTTGCAATTTCCTGTTGTTTGTCTGAGAGTGGATATGTTATTTTGGATCCAACCAAGCTAGAGGAGCAGAAAATGAAGGCATTTGTACATTTGGTCTTTCCGAACTTACCTGTCTCAGTAATTCCTGAAGGATCCACACAAGTTGCAGGTGAACCTCTGGAGCATGGAATAATAACATCTGTAACTCAGGGTGCAATGTCAGGATGCCAGTGTCTCAACAAGCTTATACTGAGTATTCACTTTTATATTGTGTGGATGATTATATACACTGCCTGGAACGGGGGCGTGCTGCAACTGCAAAATGTCTGCTTTTTTGAGGAGAAGCTTGCAGCCCCAACTCCCAACGGATTCCTCAAAAGCTGGCTGATCGGATGCAAGTCCTTGTCTGTGTTGTGCTCTACGACTAAATCTGGCTGGGAAGGCAAATTTCCCGGCTCGGGATCGATTTAG

Protein sequence

MAGWRIATTAEASPADCDNNWIVAGGLKSVGSPTTVGRSSGGGKEKREKVGERGERGRTSTSSNLSKRLTMEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAINASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIPEGSTQVAGEPLEHGIITSVTQGAMSGCQCLNKLILSIHFYIVWMIIYTAWNGGVLQLQNVCFFEEKLAAPTPNGFLKSWLIGCKSLSVLCSTTKSGWEGKFPGSGSI

Homology

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BLAST of Lag0005065 vs. NCBI nr
Match: XP_038885208.1 (exosome complex exonuclease RRP46 homolog [Benincasa hispida])

HSP 1 Score: 389.0 bits (998), Expect = 4.3e-104
Identity = 192/205 (93.66%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 71  MEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 130
           MEIDRDDGRTP+QLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 131 SIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAI 190
           SIEV+WKPKTGQIGK ERECEMILKRTLQSICILT NPNTTT+I+VQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120

Query: 191 NASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIP 250
           NASCAALVDAGIPL HLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPN PVSV+P
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVVP 180

Query: 251 EGSTQVAGEPLEHGIITSVTQGAMS 276
           EGS QV  EPLEHGIITSVTQG+MS
Sbjct: 181 EGSRQVVDEPLEHGIITSVTQGSMS 205

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BLAST of Lag0005065 vs. NCBI nr
Match: XP_022951618.1 (exosome complex exonuclease RRP46 homolog [Cucurbita moschata] >KAG6585390.1 Exosome complex exonuclease RRP46-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020307.1 Exosome complex exonuclease RRP46-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 389.0 bits (998), Expect = 4.3e-104
Identity = 194/205 (94.63%), Postives = 200/205 (97.56%), Query Frame = 0


Query: 71  MEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 130
           MEIDRDDGRT +QLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60

Query: 131 SIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAI 190
           SIEV+WKPKTGQIGK ERECEMILKRTLQSICILTINPNTTT+IVVQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120

Query: 191 NASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIP 250
           NASCAALVDAGIPL HLAVAISCCLSESGYVILDPTKLEEQKMKA VHLVFPN PVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180

Query: 251 EGSTQVAGEPLEHGIITSVTQGAMS 276
           EGSTQVAGEPLE+GIITS+TQGAMS
Sbjct: 181 EGSTQVAGEPLENGIITSLTQGAMS 205

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BLAST of Lag0005065 vs. NCBI nr
Match: XP_023002484.1 (exosome complex exonuclease RRP46 homolog [Cucurbita maxima])

HSP 1 Score: 387.5 bits (994), Expect = 1.2e-103
Identity = 193/205 (94.15%), Postives = 199/205 (97.07%), Query Frame = 0


Query: 71  MEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 130
           MEIDRDDGRT +QLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60

Query: 131 SIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAI 190
           SIEV+WKPKTGQIGK ERECEMILKRTLQSICILTINPNTTT+IVVQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120

Query: 191 NASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIP 250
           NASCAALVDAGIPL HLAVAISCCLSESGYVILDPTKLEEQKMKA VHLVFPN PVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180

Query: 251 EGSTQVAGEPLEHGIITSVTQGAMS 276
           EGSTQV GEPLE+GIITS+TQGAMS
Sbjct: 181 EGSTQVGGEPLENGIITSLTQGAMS 205

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BLAST of Lag0005065 vs. NCBI nr
Match: XP_022131722.1 (exosome complex exonuclease RRP46 homolog isoform X1 [Momordica charantia] >XP_022131723.1 exosome complex exonuclease RRP46 homolog isoform X1 [Momordica charantia] >XP_022131724.1 exosome complex exonuclease RRP46 homolog isoform X1 [Momordica charantia])

HSP 1 Score: 387.1 bits (993), Expect = 1.6e-103
Identity = 192/205 (93.66%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 71  MEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 130
           ME+DRDDGRT +QLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 131 SIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAI 190
           SIEV+WKPKTGQIGK ERECEMILKRTLQSICILTINPNTTT+I+VQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQVIHDDGALLPCAI 120

Query: 191 NASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIP 250
           NASCAALVDAGIPL HLAVAI CCLSESGYVILDPTKLEEQKMKAFVHLVFPN PVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180

Query: 251 EGSTQVAGEPLEHGIITSVTQGAMS 276
           +GSTQV  EPLEHGIITSVTQGAMS
Sbjct: 181 KGSTQVVDEPLEHGIITSVTQGAMS 205

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BLAST of Lag0005065 vs. NCBI nr
Match: XP_004150286.1 (exosome complex exonuclease RRP46 homolog [Cucumis sativus] >KGN62820.1 hypothetical protein Csa_022164 [Cucumis sativus])

HSP 1 Score: 386.7 bits (992), Expect = 2.1e-103
Identity = 190/205 (92.68%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 71  MEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 130
           MEIDRDDGRTP+QLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 131 SIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAI 190
           SIEV+WKPKTGQIGK ERECEMILKRTLQSICILT NPNTTT+I+VQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120

Query: 191 NASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIP 250
           NASCAALVDAGIPL HLAVAISCCLSE+GYVILDPTK+EE+KMKA VHLVFPN PVSV+P
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180

Query: 251 EGSTQVAGEPLEHGIITSVTQGAMS 276
           EGSTQ  GEPLEHGIITSVTQGAMS
Sbjct: 181 EGSTQGVGEPLEHGIITSVTQGAMS 205

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BLAST of Lag0005065 vs. ExPASy Swiss-Prot
Match: Q9LX74 (Exosome complex exonuclease RRP46 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP46 PE=2 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.5e-91
Identity = 157/205 (76.59%), Postives = 186/205 (90.73%), Query Frame = 0


Query: 71  MEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 130
           MEIDR+DGRTP+QLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 131 SIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAI 190
             EV+WKPK+GQIGK E+E EMILKRT+QSIC+LT+NPNTTT++++QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 191 NASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIP 250
           NA+CAALVDAGIP+ HLAVAI CCL+E+GY++LDP KLEE+KM AF +LVFPN  +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 251 EGSTQVAGEPLEHGIITSVTQGAMS 276
           EGS+   GEP+EHGIITS+T G MS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMS 205

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BLAST of Lag0005065 vs. ExPASy Swiss-Prot
Match: Q84T68 (Exosome complex exonuclease RRP46 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RRP46 PE=1 SV=2)

HSP 1 Score: 265.8 bits (678), Expect = 7.2e-70
Identity = 135/205 (65.85%), Postives = 160/205 (78.05%), Query Frame = 0


Query: 71  MEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 130
           ME  R DGR P+QLRP +C+ N L+RAHGSA W+QGDT VLAAVYGPK GT+K ENPEKA
Sbjct: 1   MEESRADGRNPNQLRPFSCTRNPLDRAHGSARWAQGDTIVLAAVYGPKPGTRKGENPEKA 60

Query: 131 SIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAI 190
           SIEV+WKP TGQIGK E+E EM LKRTLQSIC+LT++PNTTT++++QV+ +DG+LLPCAI
Sbjct: 61  SIEVVWKPMTGQIGKQEKEYEMTLKRTLQSICLLTVHPNTTTSVILQVVGNDGSLLPCAI 120

Query: 191 NASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIP 250
           NA CAALV AGIPL HLAVAI C + E G VILD  K EEQ++K+F HLVFPN   S   
Sbjct: 121 NACCAALVFAGIPLKHLAVAIGCGVLEDGEVILDTNKAEEQQLKSFAHLVFPNSRKSASS 180

Query: 251 EGSTQVAGEPLEHGIITSVTQGAMS 276
           +   Q   E  E G+ITS+T G MS
Sbjct: 181 KEPNQ-KEEDSERGLITSITHGVMS 204

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BLAST of Lag0005065 vs. ExPASy Swiss-Prot
Match: Q9NQT4 (Exosome complex component RRP46 OS=Homo sapiens OX=9606 GN=EXOSC5 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.5e-30
Identity = 66/152 (43.42%), Postives = 100/152 (65.79%), Query Frame = 0


Query: 84  LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVLWKPKTGQI 143
           LR  AC  N+L+R  GSAS+ QGDT VLA VYGP       E   KA++EV+ +PK G  
Sbjct: 28  LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKIGLP 87

Query: 144 GKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAINASCAALVDAGIP 203
           G  E+  E +++ T +++ + T++P T+ T+V+QV+ D G+LL C +NA+C ALVDAG+P
Sbjct: 88  GVAEKSRERLIRNTCEAVVLGTLHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVP 147

Query: 204 LNHLAVAISCCLSESGYVILDPTKLEEQKMKA 236
           +  L   ++C L   G ++LDPT  +E++ +A
Sbjct: 148 MRALFCGVACALDSDGTLVLDPTSKQEKEARA 179

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BLAST of Lag0005065 vs. ExPASy Swiss-Prot
Match: Q9CRA8 (Exosome complex component RRP46 OS=Mus musculus OX=10090 GN=Exosc5 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.6e-29
Identity = 65/154 (42.21%), Postives = 100/154 (64.94%), Query Frame = 0


Query: 84  LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVLWKPKTGQI 143
           LR  AC  N+L+R  GSAS+ QGDT VLA VYGP       E   KA++EV+ +PK G  
Sbjct: 28  LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKIGLP 87

Query: 144 GKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAINASCAALVDAGIP 203
           G  E+  E +++ T +++ +  ++P T+ T+V+QV+ D G+LL C +NA+C ALVDAG+P
Sbjct: 88  GVAEKSRERLVRNTCEAVVLGALHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVP 147

Query: 204 LNHLAVAISCCLSESGYVILDPTKLEEQKMKAFV 238
           +  L   ++C L   G ++LDPT  +E++ +A +
Sbjct: 148 MRALFCGVTCALDSDGNLVLDPTTKQEKEARAIL 181

[Close]

BLAST of Lag0005065 vs. ExPASy Swiss-Prot
Match: Q9SP08 (Exosome complex component RRP41 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP41 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.3e-14
Identity = 63/228 (27.63%), Postives = 112/228 (49.12%), Query Frame = 0


Query: 75  RDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEV 134
           R DGR  +++R +     V+++A GSA +  G+TKV+AAVYGP+    K++  +     V
Sbjct: 10  RLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQQKKNDHAVV 69

Query: 135 LWKPKTGQIGKPER----------ECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGA 194
           L +    Q    +R          E  +++++T+++  +  + P++   I +QV+  DG 
Sbjct: 70  LCEYSMAQFSTGDRRRQKFDRRSTELSLVIRQTMEACILTELMPHSQIDIFLQVLQADGG 129

Query: 195 LLPCAINASCAALVDAGIPLNHLAVAISCCLSESGYV----ILDPTKLEEQKMKAFVHL- 254
                INA+  AL DAGIP+  LAV+ S     +GY+    +LD   +E+    A V + 
Sbjct: 130 TRSACINAATLALADAGIPMRDLAVSCS-----AGYLNSTPLLDLNYVEDSAGGADVTVG 189

Query: 255 VFPNLPVSVIPEGSTQVAGEPLEHGIITSVTQGAMSGCQCLNKLILSI 288
           + P L    + +   ++  E  E     +V   A  GC+ + + I  +
Sbjct: 190 ILPKLDKVSLLQMDAKLPMETFE-----TVFALASEGCKAIAERIREV 227

[Close]

BLAST of Lag0005065 vs. ExPASy TrEMBL
Match: A0A6J1GI69 (exosome complex exonuclease RRP46 homolog OS=Cucurbita moschata OX=3662 GN=LOC111454378 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 2.1e-104
Identity = 194/205 (94.63%), Postives = 200/205 (97.56%), Query Frame = 0


Query: 71  MEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 130
           MEIDRDDGRT +QLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60

Query: 131 SIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAI 190
           SIEV+WKPKTGQIGK ERECEMILKRTLQSICILTINPNTTT+IVVQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120

Query: 191 NASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIP 250
           NASCAALVDAGIPL HLAVAISCCLSESGYVILDPTKLEEQKMKA VHLVFPN PVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180

Query: 251 EGSTQVAGEPLEHGIITSVTQGAMS 276
           EGSTQVAGEPLE+GIITS+TQGAMS
Sbjct: 181 EGSTQVAGEPLENGIITSLTQGAMS 205

[Close]

BLAST of Lag0005065 vs. ExPASy TrEMBL
Match: A0A6J1KQK5 (exosome complex exonuclease RRP46 homolog OS=Cucurbita maxima OX=3661 GN=LOC111496308 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 6.0e-104
Identity = 193/205 (94.15%), Postives = 199/205 (97.07%), Query Frame = 0


Query: 71  MEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 130
           MEIDRDDGRT +QLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60

Query: 131 SIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAI 190
           SIEV+WKPKTGQIGK ERECEMILKRTLQSICILTINPNTTT+IVVQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120

Query: 191 NASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIP 250
           NASCAALVDAGIPL HLAVAISCCLSESGYVILDPTKLEEQKMKA VHLVFPN PVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180

Query: 251 EGSTQVAGEPLEHGIITSVTQGAMS 276
           EGSTQV GEPLE+GIITS+TQGAMS
Sbjct: 181 EGSTQVGGEPLENGIITSLTQGAMS 205

[Close]

BLAST of Lag0005065 vs. ExPASy TrEMBL
Match: A0A6J1BU99 (exosome complex exonuclease RRP46 homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004823 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 7.9e-104
Identity = 192/205 (93.66%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 71  MEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 130
           ME+DRDDGRT +QLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 131 SIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAI 190
           SIEV+WKPKTGQIGK ERECEMILKRTLQSICILTINPNTTT+I+VQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQVIHDDGALLPCAI 120

Query: 191 NASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIP 250
           NASCAALVDAGIPL HLAVAI CCLSESGYVILDPTKLEEQKMKAFVHLVFPN PVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180

Query: 251 EGSTQVAGEPLEHGIITSVTQGAMS 276
           +GSTQV  EPLEHGIITSVTQGAMS
Sbjct: 181 KGSTQVVDEPLEHGIITSVTQGAMS 205

[Close]

BLAST of Lag0005065 vs. ExPASy TrEMBL
Match: A0A0A0LLJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374620 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 1.0e-103
Identity = 190/205 (92.68%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 71  MEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 130
           MEIDRDDGRTP+QLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 131 SIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAI 190
           SIEV+WKPKTGQIGK ERECEMILKRTLQSICILT NPNTTT+I+VQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120

Query: 191 NASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIP 250
           NASCAALVDAGIPL HLAVAISCCLSE+GYVILDPTK+EE+KMKA VHLVFPN PVSV+P
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180

Query: 251 EGSTQVAGEPLEHGIITSVTQGAMS 276
           EGSTQ  GEPLEHGIITSVTQGAMS
Sbjct: 181 EGSTQGVGEPLEHGIITSVTQGAMS 205

[Close]

BLAST of Lag0005065 vs. ExPASy TrEMBL
Match: A0A5A7VGL5 (Exosome complex exonuclease RRP46-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003630 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 2.3e-103
Identity = 189/205 (92.20%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 71  MEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 130
           MEIDRDDGRTP+QLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 131 SIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAI 190
           SIEV+WKPKTGQIGK ERECEMILKRTLQSICILT NPNTTT+I+VQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120

Query: 191 NASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIP 250
           NASCAALVDAGIPL HLAVAISCCLSE+GYVILDPTK+EE+KMKA VHLVFPN PVSV+P
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNTPVSVVP 180

Query: 251 EGSTQVAGEPLEHGIITSVTQGAMS 276
           EGSTQ  GEPLEHG+ITSVTQGAMS
Sbjct: 181 EGSTQGVGEPLEHGMITSVTQGAMS 205

[Close]

BLAST of Lag0005065 vs. TAIR 10
Match: AT3G46210.1 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 337.0 bits (863), Expect = 1.8e-92
Identity = 157/205 (76.59%), Postives = 186/205 (90.73%), Query Frame = 0


Query: 71  MEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 130
           MEIDR+DGRTP+QLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 131 SIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAI 190
             EV+WKPK+GQIGK E+E EMILKRT+QSIC+LT+NPNTTT++++QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 191 NASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIP 250
           NA+CAALVDAGIP+ HLAVAI CCL+E+GY++LDP KLEE+KM AF +LVFPN  +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 251 EGSTQVAGEPLEHGIITSVTQGAMS 276
           EGS+   GEP+EHGIITS+T G MS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMS 205

[Close]

BLAST of Lag0005065 vs. TAIR 10
Match: AT3G46210.2 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 337.0 bits (863), Expect = 1.8e-92
Identity = 157/205 (76.59%), Postives = 186/205 (90.73%), Query Frame = 0


Query: 71  MEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 130
           MEIDR+DGRTP+QLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 131 SIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAI 190
             EV+WKPK+GQIGK E+E EMILKRT+QSIC+LT+NPNTTT++++QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 191 NASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIP 250
           NA+CAALVDAGIP+ HLAVAI CCL+E+GY++LDP KLEE+KM AF +LVFPN  +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 251 EGSTQVAGEPLEHGIITSVTQGAMS 276
           EGS+   GEP+EHGIITS+T G MS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMS 205

[Close]

BLAST of Lag0005065 vs. TAIR 10
Match: AT3G46210.3 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 337.0 bits (863), Expect = 1.8e-92
Identity = 157/205 (76.59%), Postives = 186/205 (90.73%), Query Frame = 0


Query: 71  MEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 130
           MEIDR+DGRTP+QLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 131 SIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAI 190
             EV+WKPK+GQIGK E+E EMILKRT+QSIC+LT+NPNTTT++++QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 191 NASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIP 250
           NA+CAALVDAGIP+ HLAVAI CCL+E+GY++LDP KLEE+KM AF +LVFPN  +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 251 EGSTQVAGEPLEHGIITSVTQGAMS 276
           EGS+   GEP+EHGIITS+T G MS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMS 205

[Close]

BLAST of Lag0005065 vs. TAIR 10
Match: AT3G46210.4 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 337.0 bits (863), Expect = 1.8e-92
Identity = 157/205 (76.59%), Postives = 186/205 (90.73%), Query Frame = 0


Query: 71  MEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 130
           MEIDR+DGRTP+QLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 131 SIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAI 190
             EV+WKPK+GQIGK E+E EMILKRT+QSIC+LT+NPNTTT++++QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 191 NASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIP 250
           NA+CAALVDAGIP+ HLAVAI CCL+E+GY++LDP KLEE+KM AF +LVFPN  +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 251 EGSTQVAGEPLEHGIITSVTQGAMS 276
           EGS+   GEP+EHGIITS+T G MS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMS 205

[Close]

BLAST of Lag0005065 vs. TAIR 10
Match: AT3G46210.5 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 337.0 bits (863), Expect = 1.8e-92
Identity = 157/205 (76.59%), Postives = 186/205 (90.73%), Query Frame = 0


Query: 71  MEIDRDDGRTPSQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 130
           MEIDR+DGRTP+QLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 131 SIEVLWKPKTGQIGKPERECEMILKRTLQSICILTINPNTTTTIVVQVIHDDGALLPCAI 190
             EV+WKPK+GQIGK E+E EMILKRT+QSIC+LT+NPNTTT++++QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 191 NASCAALVDAGIPLNHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNLPVSVIP 250
           NA+CAALVDAGIP+ HLAVAI CCL+E+GY++LDP KLEE+KM AF +LVFPN  +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 251 EGSTQVAGEPLEHGIITSVTQGAMS 276
           EGS+   GEP+EHGIITS+T G MS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMS 205

The following BLAST results are available for this feature:

BLAST of Lag0005065 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885208.1	4.3e-104	93.66	exosome complex exonuclease RRP46 homolog [Benincasa hispida]	[more]
XP_022951618.1	4.3e-104	94.63	exosome complex exonuclease RRP46 homolog [Cucurbita moschata] >KAG6585390.1 Exo...	[more]
XP_023002484.1	1.2e-103	94.15	exosome complex exonuclease RRP46 homolog [Cucurbita maxima]	[more]
XP_022131722.1	1.6e-103	93.66	exosome complex exonuclease RRP46 homolog isoform X1 [Momordica charantia] >XP_0...	[more]
XP_004150286.1	2.1e-103	92.68	exosome complex exonuclease RRP46 homolog [Cucumis sativus] >KGN62820.1 hypothet...	[more]

BLAST of Lag0005065 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LX74	2.5e-91	76.59	Exosome complex exonuclease RRP46 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP...	[more]
Q84T68	7.2e-70	65.85	Exosome complex exonuclease RRP46 homolog OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9NQT4	2.5e-30	43.42	Exosome complex component RRP46 OS=Homo sapiens OX=9606 GN=EXOSC5 PE=1 SV=1	[more]
Q9CRA8	1.6e-29	42.21	Exosome complex component RRP46 OS=Mus musculus OX=10090 GN=Exosc5 PE=1 SV=1	[more]
Q9SP08	4.3e-14	27.63	Exosome complex component RRP41 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP41...	[more]

BLAST of Lag0005065 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GI69	2.1e-104	94.63	exosome complex exonuclease RRP46 homolog OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KQK5	6.0e-104	94.15	exosome complex exonuclease RRP46 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1BU99	7.9e-104	93.66	exosome complex exonuclease RRP46 homolog isoform X1 OS=Momordica charantia OX=3...	[more]
A0A0A0LLJ9	1.0e-103	92.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374620 PE=4 SV=1	[more]
A0A5A7VGL5	2.3e-103	92.20	Exosome complex exonuclease RRP46-like protein OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of Lag0005065 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46210.1	1.8e-92	76.59	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT3G46210.2	1.8e-92	76.59	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT3G46210.3	1.8e-92	76.59	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT3G46210.4	1.8e-92	76.59	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT3G46210.5	1.8e-92	76.59	Ribosomal protein S5 domain 2-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001247	Exoribonuclease, phosphorolytic domain 1	PFAM	PF01138	RNase_PH	coord: 83..203 e-value: 1.2E-24 score: 87.3
IPR027408	PNPase/RNase PH domain superfamily	GENE3D	3.30.230.70		coord: 71..287 e-value: 8.8E-62 score: 210.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..56
None	No IPR available	PANTHER	PTHR11953	EXOSOME COMPLEX COMPONENT	coord: 71..277
None	No IPR available	PANTHER	PTHR11953:SF1	EXOSOME COMPLEX COMPONENT RRP46	coord: 71..277
None	No IPR available	CDD	cd11372	RNase_PH_RRP46	coord: 84..275 e-value: 1.94796E-68 score: 211.654
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 82..202
IPR036345	Exoribonuclease, PH domain 2 superfamily	SUPERFAMILY	55666	Ribonuclease PH domain 2-like	coord: 203..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0005065.1	Lag0005065.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0071028	nuclear mRNA surveillance
biological_process	GO:0034427	nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
biological_process	GO:0071051	polyadenylation-dependent snoRNA 3'-end processing
biological_process	GO:0090501	RNA phosphodiester bond hydrolysis
biological_process	GO:0016075	rRNA catabolic process
biological_process	GO:0034475	U4 snRNA 3'-end processing
cellular_component	GO:0000177	cytoplasmic exosome (RNase complex)
cellular_component	GO:0000176	nuclear exosome (RNase complex)
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0004536	deoxyribonuclease activity
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0004540	ribonuclease activity
molecular_function	GO:0003727	single-stranded RNA binding