Lag0005045 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGGTCGACGTCGCCTGGAATAAAAGCTCCCTAAATACCAGCTATGGGTGGTATATGTGGTTCCCTAATAGCAACACGAGCGAGGATGGATCGAGAAGGGGTGGAAATAGCTTGAATAGCCTGCATGCTGAGGGAAACGCCTTGATTTGGGGCTTGGAATGTGCAGAGAACAAAGGAATTAGGGAAATGTGGGTGAAGTCTGATTCTTTGAGGCTGGTGAATATTGTAAATGACAAAGAGTGCTATCATGTGGACTTTGAGCCAATCCAAGATGCTATTCAGATGATGTATGAGAGATTTAATTCTTGTAATTTGTCATTTGTGAGGAGAGAGCATAATGGAAAAGCACACTGCTTGGCCAGATCTGTAGCCTCTCAATCTTCTATTTAA ATGTGGGTCGACGTCGCCTGGAATAAAAGCTCCCTAAATACCAGCTATGGGTGGTATATGTGGTTCCCTAATAGCAACACGAGCGAGGATGGATCGAGAAGGGGTGGAAATAGCTTGAATAGCCTGCATGCTGAGGGAAACGCCTTGATTTGGGGCTTGGAATGTGCAGAGAACAAAGGAATTAGGGAAATGTGGGTGAAGTCTGATTCTTTGAGGCTGGTGAATATTGTAAATGACAAAGAGTGCTATCATGTGGACTTTGAGCCAATCCAAGATGCTATTCAGATGATGTATGAGAGATTTAATTCTTGTAATTTGTCATTTGTGAGGAGAGAGCATAATGGAAAAGCACACTGCTTGGCCAGATCTGTAGCCTCTCAATCTTCTATTTAA ATGTGGGTCGACGTCGCCTGGAATAAAAGCTCCCTAAATACCAGCTATGGGTGGTATATGTGGTTCCCTAATAGCAACACGAGCGAGGATGGATCGAGAAGGGGTGGAAATAGCTTGAATAGCCTGCATGCTGAGGGAAACGCCTTGATTTGGGGCTTGGAATGTGCAGAGAACAAAGGAATTAGGGAAATGTGGGTGAAGTCTGATTCTTTGAGGCTGGTGAATATTGTAAATGACAAAGAGTGCTATCATGTGGACTTTGAGCCAATCCAAGATGCTATTCAGATGATGTATGAGAGATTTAATTCTTGTAATTTGTCATTTGTGAGGAGAGAGCATAATGGAAAAGCACACTGCTTGGCCAGATCTGTAGCCTCTCAATCTTCTATTTAA MWVDVAWNKSSLNTSYGWYMWFPNSNTSEDGSRRGGNSLNSLHAEGNALIWGLECAENKGIREMWVKSDSLRLVNIVNDKECYHVDFEPIQDAIQMMYERFNSCNLSFVRREHNGKAHCLARSVASQSSI Homology
BLAST of Lag0005045 vs. NCBI nr
Match: KAG7593976.1 (Ribonuclease H domain [Arabidopsis thaliana x Arabidopsis arenosa]) HSP 1 Score: 69.3 bits (168), Expect = 2.7e-08 Identity = 45/129 (34.88%), Postives = 65/129 (50.39%), Query Frame = 0
BLAST of Lag0005045 vs. NCBI nr
Match: XP_010451887.1 (PREDICTED: uncharacterized protein LOC104734079 [Camelina sativa]) HSP 1 Score: 67.8 bits (164), Expect = 8.0e-08 Identity = 40/121 (33.06%), Postives = 63/121 (52.07%), Query Frame = 0
BLAST of Lag0005045 vs. NCBI nr
Match: KAG7571790.1 (Reverse transcriptase domain [Arabidopsis suecica]) HSP 1 Score: 67.4 bits (163), Expect = 1.0e-07 Identity = 41/122 (33.61%), Postives = 62/122 (50.82%), Query Frame = 0
BLAST of Lag0005045 vs. NCBI nr
Match: KAG7585995.1 (Reverse transcriptase zinc-binding domain [Arabidopsis thaliana x Arabidopsis arenosa]) HSP 1 Score: 65.1 bits (157), Expect = 5.2e-07 Identity = 40/123 (32.52%), Postives = 62/123 (50.41%), Query Frame = 0
BLAST of Lag0005045 vs. NCBI nr
Match: KAG7539157.1 (Ribonuclease H domain [Arabidopsis suecica]) HSP 1 Score: 64.7 bits (156), Expect = 6.7e-07 Identity = 43/129 (33.33%), Postives = 63/129 (48.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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