Lag0004986 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0004986
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Ribonuclease H
Location	chr6: 9280792 .. 9286413 (-)
RNA-Seq Expression	Lag0004986
Synteny	Lag0004986

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTAAGTCAGCAAGCATAACGGTAGGGCGTGGAAAAGTAAGAGCAAGAGGAGAAAACAGAGAATAGAGAGTAAAGTTTAGGGATAGAATTCGGGATCCCCTCTTCAGTGGCGAAGAGGGATATAAATACCTGTTCATCCTCCTAGCCTTTTTAGGGTTTCAGAGGCGTTTTAGGTCAAACCAGGCGAAACCGGGGTATCCAGAGGCGGTGGGGACCAGACGGGACCAAACGAGCTCGGCCTCGGCCCATGGCCGAGGCCGAGCATGGGGTCGGGTCAAAAACCCGACCCCTTCGACCTTGGCCCGTCCCGCTTACCGGCTCCGCCTCCTTGGCCCGGTTTCCAGCCCGATTTCTCCCCGATTGTCCTCGTCAGCTCCTCGTACATCGGGGTGGTCCAAAATTGCCTATAACACATAATATGAATATATTTGTCAAGATTTTAGGCAAAAAGCTTACACGGACCGGATATTTTTAACAGTAGTTAACTACAATTAATTTTGAGATATAATAAGAGTGCAAGGACCAAATTTAGATATTTGAAAGCATAGGAAACTGAACAAGTTTCAAACTACGGAATCAAAACAATAATTGCCAACAAGAGCTTAGCTCAACTGACATAAAGTTGTACTGTTAACCACAAGGGTCAGTGGTTCGAATCCCCCTCCCCACATATTTAGAACCAAAACAATAATTTAACCCAAAAAAAAAAATTATTGATCATAAAACTAGAAGTTTGAATCTCCACCCCATATATTTCCGACCCAAAAAAGGCATCACAAAGAAAAGTCCACAAATGCAGAGGTTGAAGAAAACAGAAAGCAATGAAAGTGAAAGGCAAATAAAATGATTAAGCATAAAGCAATGATATATATTTCTGAGCGCATGGGCTGCCATATTTTTCCTTTGAAAAATGGAGAGAGGCACTGAATGAAACAAAGCAACACATTCAAATTCTTCAATTTCAATATCACTTTTCAGATTCCAATGTTTTTCTGCTTTCTTTTCCTCTAAAGTAATCGCTGGCTTTTGAACCAATATAATGTCCCACAAATTGCAGCGCCGCACCCGCCGCCGCACCCACCGCCGCTCAGCGGATGTTGATGGCTCCGGCAAAGCCTTTTTCATTTGTGCTTATGTGTCGACAGTCGACAGACAATGGCCGTCCAAAGTCAACCGCCCAAGGGAAGAAGAAAAGTTATCATTGCCTTTTTTTTTCTTTTTTTTTCTTCCTTTTCATATTCTTACATTTAAATTCATCTTTGAATTTTCGTTTTGATTCTTAATACTTTTTTGGACGGTTTATTTGCATAATAATTTCTTTGATTCTTGATGTGACACTACGTAAGTTTATTTTTTTAAAAAAACTAAATTGCTTGGAGTTATTAGTCTAGTATCAAATTTGGAAATGGGTGAGAAAAATTTGGTTGAATGTTGGATAATCATTTGGTTTTTGAAAATTATGTGTGTTTTCTTCCAATTTCTTTACAATCATTTTCATATTTGTTAGGAGCACATAAAAATTCTTAGCCAAATTTTAAAAAAAAAAAAAAAAAAGCTTATGGCTTTTTGAACTTTCAAATCTTATGTCAATTGGTTTTGAAATGAAACCTCATGTTAGACTTAGTTTAGGATTGCAGTAGTTTTCAAAATAATTGCTGGTAACTTTGCTTTTAGAAAAATCAGCTTTGAAATGAAGTAAAATAGTGTTTGGTAAATTTCAATTTTAAATTAGAAAAAACTAGTTCCAGTGTTTGATAAATTAATATTAAATTGTTAGGATTTAATTATAAGGATCATATTAGACTTATTATTTCAAATATTTTTTTTATTAATACTTAACTTATAATTTATTATAAGATAATTATTTAAAAGTTTGTATAATTTAAATTGCATCTAATTATGTTTAATTAATCTAAAATATTTGATAAAAATGTAAGAAAAATAATTATTATAAAAATTGAATTAATCAAATTTTTATTCATATGAGAGTGAGCATATGTAAAATATATATAAGAAGGATAAATTTGAAATTTAAAAATCGTTAGAAAATGTGATAGATTTTTAGAAAAGTTAAATCTAAAAGTTGGTATCCAAGAGCTTTTGCACGGTAGAGTAAACTAAAAAGTGATTCTCGATAGATTAATCTGTTTTACCAAACAGTTTAAGCGGTTAAGATTCTCCCATAATAGCTTTTTACGCAACGCAACCCCAAACGGAGCCTTAATCTAATTAAAAGCTTATGGCTTTTTGAACTTTCAAATCTTATGTTCATCTTCATATATATTTGCATAAATAAAACTATATTAGTTGTTATTTTTTTTAGTACAAAAGTGTTGAGGATCCCACATTGAAAAGATTAGTGGAGACCTCATGATTTATAAGCTACAAGGGTTACTCCCGCCAATTGGTTTTGAGATGAAACCTCATGTTAATCTAATTAAAAACTATGAGATAAGTATTTGAACCTTTGACTTTTTTTTTTTTTATCAAAAGTACATATCTTATGATAGTTGAGTTATGCTCATATTGACGAATAATAATAATGTTAGCATTTTATTATATTATTGTTGATGTCCTATATTAACAAAAAGAAAACCAAAGTCATTTTAAAACATAGAACTTAATACATGTGACTTCAAAATATTTTCTATAAAATTCAAAAATCAAAAGGGAGCACTTGAAAACCTAGGAAACAAAATAGAATGAGTATAAAAATTCTAAGAACTAAGTTAAAATTAAGGAAAGGCTGGAAAGTAAATTCATTATAAAAAATAGGATCTATAAACAATTAAATATAAAACAGTTGAATATGATTAAAAAGTAAATTTATGGAAACTTGGATTCAAAGAAAACATTAATCAAACTAATTAAAGTCAAAATTAATTAGATGGTCCAGAAAGTCCAGTCCTAGGTTTTGAAAAATTGGAAAGAGAAAGTAAAAGTGGAGGGCTTTTTAGGCAAAGGGACTTGAAAATTGGAGTAAAAAGCAAATTACTATAAGTTGGAGGTGCCGACCAAATTGAATTGGTTTAATTTATCCGACAAAGGAGCAACCAAGTCAACCACAATGAACTAAATCGTCATTTACCTTTCCACCTAACATTTTTAATTAAACCAAATTCATATAAATTTTTAAAAATATGTATTTTTTCACTTATCAATCAATTATTCAATATAGTTGCCACCACTGTTACTCTCATTATCGTTAAATATATAACTAAAAATATCTTTTATACTTTCTTTTATTTATTTATTTATTTATATATGTATATATGTGTAAAGGTAAAAATGAAACCAACGACCTTTGGAATGATAATTGATACCTTATCTACTGAGTTATGCATATTCGAATTGGTTTCTTCTTCCAATATTTAATTGATACTTTGGATTAATGATAATCAATACCTTTGAAATGATAAGTTATATGTTTTCTTAGGCCTCAATTGGTATCACTTGGTTTTTTGTTTTTGAAAATTAGGTTTGTTTTGCTTCAATTTCCTTACCATGGTTTTCTTATTTGTTAAGGAAATATTTGAATTCTTAGCCAAGTTCCAAAGCAAACACAAAAATTTGAAAACTGTTTTTTTAAGTTTTAAAAACCTGACTTGATTTTTAAAAACAAAGGAAGAAGGTCGGTATCAAAACAAAGAAACTTATAGGTAGAAGTGAGGTTTACAAGCTTAATTTTCAAAAACAAAAAACCAATTGGTTATCAAACATTACGTTAGTTTTTTTTTTTTTTTTTTAGGAGTTTAGCCCCCACATTAATATTATTCTTCCATGAGCGCAATCCACCACAATAACATTTACTAAGCGATGAGCATAAAATAGTCTCTATTAGAACTTTGTTATTTTAGAAATGCATCGTCATACGATTACTCATAAATTGCTAGTAGCGTATATAGCCAAAATGTGTTCTAGCTCAGCGATAATTAACATTTATCATTAACTAAAAGTCAGAGATTCGGATTCCCTTCACCCCAAATGTTGTTGAACTAAAAAAAAATTACAAGATGCGTGTATAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTTATAGGTAATTTTGGACAACCACAGCGTACGAGGAGCTGACGGGACAACCGGGAGGAGATAGAACCAAGAAAGGGACCCAGAGGGAGACCATACCGACGGGTAGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCGGCCTTGGGCCGAGCCCGACCACTCGGCCCGTTTGCGCGGGCCGAGTCCGTTTGCCTCCGCTCGGCCCCTACCGCTTCCAGCTGCCTCGGTCCAGCCTGCTTCGTCCCAGAACGCCTCCAAACCCTAGGAGTCCGAGCAGGTATTTATACCCCTCTTCGCCATCGAAGAAGGGGGCCGAAAACTCTATTCTTGACTTCTTTCTCTACTCTCTAGCTGCTCAGTTTCCTGACTTAGGCATCGGAGGCGGTGTGGCCTACACCACACCGTTGTCCAGCGATTCTTGCTGGTCTTGCAGGTCACGTCTTCCCCAGCTTCTACAAATTCACTGTTGGTGTCACGTGAAGGCCAGGTGAATCCCCTGTCCGGATTTTGGCATCAACAGTTGGCGCCGTCTATGGGGAAGAATGCTTGCCAGATCGGATCGCACATCGGTGGTGGTCTGCACGATGGATCGGGTTCAGAAACCAGAGGGAAGCCTCGGGTATGAGCAGAAAGCGCCGAGCCAGACTGGGTTCGACCTCGGTATGGAATAGGCCGACCTTGACTTCGGAGACTGTTGTAAGGATCCGTGTGCCCACGATGCTACGGACCTAACCCAAGAGGACAACCAGCAGAAGGAGAGAGAGAACCGGGAAGCTGTTATATCCGACCAGCATCAAGAAGACAAAGGAAAAGGATGTCGGGTAGAAGATGTAGGCCAGATCCGACATGAGCACTCCTCGGCCAATGGCCGAGGCCGAGCAGAAGCCCAATCGCAAAAAAAAGCCCGCAGAAGTTCGCCGCAAAAGACAGCGTCGGGTACGTACACAGGAAATAATGCCAGGACAAAGTCAGAGGCTCGGGCAAAGTCCGAGGCCGACCAGAGGCCAAAGAGCCACAGGGCTGTGCGGAACCAAAAAGCCAGATTCGACAGGTATACACCACTAACAGCTTCGTCTGAACAGGTCTTGGCCCCAATACAGGACACAAATCTGTTGAAACGCCCAGAAAAGTTGAGGTCAGACCCCGATAAGAGGAACAAAAACAAATACTGCATGTTCCACGGAGACCACGGTCATGCAACCCGGGAATGCATACAGTTGAGGGACGAGATAGAAGCCCTAATCCGAGAAGGTTACCCCAAGGGGTTCGTGGGGAACGACAGAAGCAAGAGGCCACTGCCGGCAGATCAAGGTAAGGGCGGTGCCAACCCGCTATTCGAGATACAAACAATTTCAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCGAGCAAAAAATGTCGAGGGAATGTTACTTTATGGCGCTCGGGAACATCGACAGGAAGACTCAAGCAACGTCGTCCTCGGGAGATGGCCGAGGCCGAGCCTTTGAGGGGTCAAGCTATCTCCTTCCAATGAAACATTGA

mRNA sequence

ATGCTTAAGTCAGCAAGCATAACGGTAGGGCGTGGAAAAGTCAAACCAGGCGAAACCGGGGTATCCAGAGGCGGTGGGGACCAGACGGGACCAAACGAGCTCGGCCTCGGCCCATGGCCGAGGCCGAGCATGGGGTCGGGTCAAAAACCCGACCCCTTCGACCTTGGCCCGTCCCGCTTACCGGCTCCGCCTCCTTGGCCCGGTTTCCAGCCCGATTTCTCCCCGATTGTCCTCGTCAGCTCCTCCGCCGCACCCGCCGCCGCACCCACCGCCGCTCAGCGGATGTTGATGGCTCCGGCAAAGCCTTTTTCATTTGTGCTTATGTGTCGACAGTCGACAGACAATGGCCGTCCAAAGTCAACCGCCCAAGGGAAGAAGAAAACGTACGAGGAGCTGACGGGACAACCGGGAGGAGATAGAACCAAGAAAGGGACCCAGAGGGAGACCATACCGACGGGTAGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCGGCCTTGGGCCGAGCCCGACCACTCGGCCCGTTTGCGCGGGCCGAGTCCGTTTGCCTCCGCTCGGCCCCTACCGCTTCCAGCTGCCTCGGTCCAGCCTGCTTCGTCCCAGAACGCCTCCAAACCCTAGGAGTCCGAGCAGCTTCTACAAATTCACTGTTGGTGTCACGTGAAGGCCAGGTGAATCCCCTGTCCGGATTTTGGCATCAACAGTTGGCGCCGTCTATGGGGAAGAATGCTTGCCAGATCGGATCGCACATCGGTGGTGGTCTGCACGATGGATCGGGTTCAGAAACCAGAGGGAAGCCTCGGGCCGACCTTGACTTCGGAGACTGTTGTAAGGATCCGTGTGCCCACGATGCTACGGACCTAACCCAAGAGGACAACCAGCAGAAGGAGAGAGAGAACCGGGAAGCTGTTATATCCGACCAGCATCAAGAAGACAAAGGAAAAGGATGTCGGGTAGAAGATGTAGGCCAGATCCGACATGAGCACTCCTCGGCCAATGGCCGAGGCCGAGCAGAAGCCCAATCGCAAAAAAAAGCCCGCAGAAGTTCGCCGCAAAAGACAGCGTCGGGTACGTACACAGGAAATAATGCCAGGACAAAGTCAGAGGCTCGGGCAAAGTCCGAGGCCGACCAGAGGCCAAAGAGCCACAGGGCTGTGCGGAACCAAAAAGCCAGATTCGACAGGTATACACCACTAACAGCTTCGTCTGAACAGGTCTTGGCCCCAATACAGGACACAAATCTGTTGAAACGCCCAGAAAAGTTGAGGTCAGACCCCGATAAGAGGAACAAAAACAAATACTGCATGTTCCACGGAGACCACGGTCATGCAACCCGGGAATGCATACAGTTGAGGGACGAGATAGAAGCCCTAATCCGAGAAGGTTACCCCAAGGGGTTCGTGGGGAACGACAGAAGCAAGAGGCCACTGCCGGCAGATCAAGGTAAGGGCGGTGCCAACCCGCTATTCGAGATACAAACAATTTCAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCGAGCAAAAAATGTCGAGGGAATGTTACTTTATGGCGCTCGGGAACATCGACAGGAAGACTCAAGCAACGTCGTCCTCGGGAGATGGCCGAGGCCGAGCCTTTGAGGGGTCAAGCTATCTCCTTCCAATGAAACATTGA

Coding sequence (CDS)

ATGCTTAAGTCAGCAAGCATAACGGTAGGGCGTGGAAAAGTCAAACCAGGCGAAACCGGGGTATCCAGAGGCGGTGGGGACCAGACGGGACCAAACGAGCTCGGCCTCGGCCCATGGCCGAGGCCGAGCATGGGGTCGGGTCAAAAACCCGACCCCTTCGACCTTGGCCCGTCCCGCTTACCGGCTCCGCCTCCTTGGCCCGGTTTCCAGCCCGATTTCTCCCCGATTGTCCTCGTCAGCTCCTCCGCCGCACCCGCCGCCGCACCCACCGCCGCTCAGCGGATGTTGATGGCTCCGGCAAAGCCTTTTTCATTTGTGCTTATGTGTCGACAGTCGACAGACAATGGCCGTCCAAAGTCAACCGCCCAAGGGAAGAAGAAAACGTACGAGGAGCTGACGGGACAACCGGGAGGAGATAGAACCAAGAAAGGGACCCAGAGGGAGACCATACCGACGGGTAGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCGGCCTTGGGCCGAGCCCGACCACTCGGCCCGTTTGCGCGGGCCGAGTCCGTTTGCCTCCGCTCGGCCCCTACCGCTTCCAGCTGCCTCGGTCCAGCCTGCTTCGTCCCAGAACGCCTCCAAACCCTAGGAGTCCGAGCAGCTTCTACAAATTCACTGTTGGTGTCACGTGAAGGCCAGGTGAATCCCCTGTCCGGATTTTGGCATCAACAGTTGGCGCCGTCTATGGGGAAGAATGCTTGCCAGATCGGATCGCACATCGGTGGTGGTCTGCACGATGGATCGGGTTCAGAAACCAGAGGGAAGCCTCGGGCCGACCTTGACTTCGGAGACTGTTGTAAGGATCCGTGTGCCCACGATGCTACGGACCTAACCCAAGAGGACAACCAGCAGAAGGAGAGAGAGAACCGGGAAGCTGTTATATCCGACCAGCATCAAGAAGACAAAGGAAAAGGATGTCGGGTAGAAGATGTAGGCCAGATCCGACATGAGCACTCCTCGGCCAATGGCCGAGGCCGAGCAGAAGCCCAATCGCAAAAAAAAGCCCGCAGAAGTTCGCCGCAAAAGACAGCGTCGGGTACGTACACAGGAAATAATGCCAGGACAAAGTCAGAGGCTCGGGCAAAGTCCGAGGCCGACCAGAGGCCAAAGAGCCACAGGGCTGTGCGGAACCAAAAAGCCAGATTCGACAGGTATACACCACTAACAGCTTCGTCTGAACAGGTCTTGGCCCCAATACAGGACACAAATCTGTTGAAACGCCCAGAAAAGTTGAGGTCAGACCCCGATAAGAGGAACAAAAACAAATACTGCATGTTCCACGGAGACCACGGTCATGCAACCCGGGAATGCATACAGTTGAGGGACGAGATAGAAGCCCTAATCCGAGAAGGTTACCCCAAGGGGTTCGTGGGGAACGACAGAAGCAAGAGGCCACTGCCGGCAGATCAAGGTAAGGGCGGTGCCAACCCGCTATTCGAGATACAAACAATTTCAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCGAGCAAAAAATGTCGAGGGAATGTTACTTTATGGCGCTCGGGAACATCGACAGGAAGACTCAAGCAACGTCGTCCTCGGGAGATGGCCGAGGCCGAGCCTTTGAGGGGTCAAGCTATCTCCTTCCAATGAAACATTGA

Protein sequence

MLKSASITVGRGKVKPGETGVSRGGGDQTGPNELGLGPWPRPSMGSGQKPDPFDLGPSRLPAPPPWPGFQPDFSPIVLVSSSAAPAAAPTAAQRMLMAPAKPFSFVLMCRQSTDNGRPKSTAQGKKKTYEELTGQPGGDRTKKGTQRETIPTGRANVARPVRSASALGRARPLGPFARAESVCLRSAPTASSCLGPACFVPERLQTLGVRAASTNSLLVSREGQVNPLSGFWHQQLAPSMGKNACQIGSHIGGGLHDGSGSETRGKPRADLDFGDCCKDPCAHDATDLTQEDNQQKERENREAVISDQHQEDKGKGCRVEDVGQIRHEHSSANGRGRAEAQSQKKARRSSPQKTASGTYTGNNARTKSEARAKSEADQRPKSHRAVRNQKARFDRYTPLTASSEQVLAPIQDTNLLKRPEKLRSDPDKRNKNKYCMFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDRSKRPLPADQGKGGANPLFEIQTISGGSSEEGGAAHGEQKMSRECYFMALGNIDRKTQATSSSGDGRGRAFEGSSYLLPMKH

Homology

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BLAST of Lag0004986 vs. NCBI nr
Match: XP_030955724.1 (uncharacterized protein LOC115977839 [Quercus lobata])

HSP 1 Score: 112.8 bits (281), Expect = 9.2e-21
Identity = 67/160 (41.88%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 374 SEADQRPKSHRAVRNQK---------ARFDRYTPLTASSEQVLAPIQDTNLLKRPEKLRS 433
           SE   RPK  R    ++          R   YTPL A   QVL  I+D   LK PEK++ 
Sbjct: 208 SEQAPRPKKGRTEDRKERDGRKTGPLGRSQNYTPLNAPLNQVLMQIKDDPSLKWPEKMKG 267

Query: 434 DPDKRNKNKYCMFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDRSKRPLPADQGKG 493
           DP+KRNKNKYC FH DHGH T EC  L+ +IE LIR+G  K FVG DR+   L     + 
Sbjct: 268 DPNKRNKNKYCRFHRDHGHDTDECYDLKQQIENLIRQGKLKHFVGRDRTDEKLKGKMEES 327

Query: 494 GANPLFEIQTISGGSSEEGGAAHGEQKMSRECYFMALGNI 525
              PL EI+ I GG+        G+   S++ Y  A+ N+
Sbjct: 328 SRPPLGEIRIIVGGN------PMGQSSKSKKTYLKAVQNV 361

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BLAST of Lag0004986 vs. NCBI nr
Match: XP_030950020.1 (uncharacterized protein LOC115973918 [Quercus lobata])

HSP 1 Score: 112.5 bits (280), Expect = 1.2e-20
Identity = 63/152 (41.45%), Postives = 80/152 (52.63%), Query Frame = 0


Query: 373 KSEADQRPKSHRAVRNQKARFDRYTPLTASSEQVLAPIQDTNLLKRPEKLRSDPDKRNKN 432
           K   D+R            R  +YTPL A  EQVL  I+D   LK PEKL+ DP+KRN+N
Sbjct: 17  KGRTDERRDRESKKPGLPVRNQQYTPLNAPLEQVLMQIKDDPSLKWPEKLKGDPNKRNRN 76

Query: 433 KYCMFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDRSKRPLPADQGKGGANPLFEI 492
           KYC FH DHGH T EC  L+ +IE LIR+G  +GF+G D+               PL EI
Sbjct: 77  KYCRFHRDHGHNTDECFDLKQQIENLIRQGKLRGFLGRDQRDEKQKGKMEDSSRPPLGEI 136

Query: 493 QTISGGSSEEGGAAHGEQKMSRECYFMALGNI 525
           + I GGSS       G    S++ Y   + N+
Sbjct: 137 RVIIGGSST------GRSSKSKKAYLKVVQNV 162

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BLAST of Lag0004986 vs. NCBI nr
Match: XP_030924801.1 (uncharacterized protein LOC115951796 [Quercus lobata] >XP_030958401.1 uncharacterized protein LOC115980273 [Quercus lobata])

HSP 1 Score: 109.4 bits (272), Expect = 1.0e-19
Identity = 62/152 (40.79%), Postives = 80/152 (52.63%), Query Frame = 0


Query: 373 KSEADQRPKSHRAVRNQKARFDRYTPLTASSEQVLAPIQDTNLLKRPEKLRSDPDKRNKN 432
           K   + R +          R   YTPL A   QV   I+D   LK PEK++ DP+KRNKN
Sbjct: 17  KGRTEDRKERDGRKTGPMGRSQNYTPLNAPLNQVFMQIKDDPSLKWPEKMKGDPNKRNKN 76

Query: 433 KYCMFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDRSKRPLPADQGKGGANPLFEI 492
           KYC FH DHGH T EC  L+ +IE LIR+G  K FVG DR+   L     +    PL EI
Sbjct: 77  KYCRFHRDHGHDTDECYDLKQQIENLIRQGKLKHFVGRDRTDEKLKGKMEESSRPPLGEI 136

Query: 493 QTISGGSSEEGGAAHGEQKMSRECYFMALGNI 525
           + I GG+        G+   S++ Y  A+ N+
Sbjct: 137 RIIVGGN------PMGQSFKSKKTYLKAVQNV 162

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BLAST of Lag0004986 vs. NCBI nr
Match: XP_030970531.1 (uncharacterized protein LOC115990904 [Quercus lobata])

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-19
Identity = 73/196 (37.24%), Postives = 100/196 (51.02%), Query Frame = 0


Query: 329 HSSANGRGRAEAQSQKKARRSSPQKTASGTYTGNNARTKSEARAKSEADQRPKSHRAVRN 388
           HS+ N     +A   KK +RS    T    +     R K     +    +  K   +VRN
Sbjct: 125 HSTQNFMNAEDAIIAKKRKRSERMDTNPSRHHEQGTRPKKGRTEERRDRESKKPSPSVRN 184

Query: 389 QKARFDRYTPLTASSEQVLAPIQDTNLLKRPEKLRSDPDKRNKNKYCMFHGDHGHATREC 448
           Q     +YTPL A  EQVL  I+D   LK P+K++ DP+KRN+NKYC FH DHGH T EC
Sbjct: 185 Q-----QYTPLNAPLEQVLMQIKDDPSLKWPKKMKRDPNKRNRNKYCRFHRDHGHDTDEC 244

Query: 449 IQLRDEIEALIREGYPKGFVGNDRSKRPLPADQGKGGANPLFEIQTISGGSSEEGGAAHG 508
             L+ +IE LIR+G  +GF+G D+          +    PL EI+ I GGSS       G
Sbjct: 245 FDLKQQIENLIRQGKLRGFLGQDQRDEKQKGKIEESSRPPLGEIRVIIGGSST------G 304

Query: 509 EQKMSRECYFMALGNI 525
           +   S++ Y   + +I
Sbjct: 305 QSSKSKKAYLKVVQSI 309

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BLAST of Lag0004986 vs. NCBI nr
Match: XP_030970555.1 (uncharacterized protein LOC115990928 [Quercus lobata])

HSP 1 Score: 107.8 bits (268), Expect = 3.0e-19
Identity = 67/171 (39.18%), Postives = 88/171 (51.46%), Query Frame = 0


Query: 374 SEADQRPKSHRAVRNQK---------ARFDRYTPLTASSEQVLAPIQDTNLLKRPEKLRS 433
           SE   RPK  R    ++          R   YTPL A  +QVL  I+D   LK PEK++ 
Sbjct: 9   SEQAPRPKKGRTEDKKERDNRKTGPLGRSQNYTPLNAPLDQVLMQIKDDPSLKWPEKMKG 68

Query: 434 DPDKRNKNKYCMFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDRSKRPLPADQGKG 493
            P+KRNKNKYC FH DHGH T EC  L+ +IE LIR+G  + FVG D     L     + 
Sbjct: 69  GPNKRNKNKYCRFHRDHGHDTDECYDLKQQIENLIRQGKLRHFVGRDHKDEKLKGKMEES 128

Query: 494 GANPLFEIQTISGGSSEEGGAAHGEQKMSRECYFMALGNI--DRKTQATSS 534
              PL EI+ I GG+S       G+   S++ Y   + N+   R++  T S
Sbjct: 129 SRPPLGEIRIIVGGNS------MGQSSKSKKTYLKVVQNVQLSRRSPRTRS 173

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BLAST of Lag0004986 vs. ExPASy TrEMBL
Match: A0A6J1DZ52 (uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025612 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.6e-18
Identity = 60/145 (41.38%), Postives = 86/145 (59.31%), Query Frame = 0


Query: 361 GNNARTKSEARAKSEADQRPKSHRAVRNQK---ARFDRYTPLTASSEQVLAPIQDTNLLK 420
           G  A  K E   +     + +    V  QK    +F++YTP T   EQVL  I+D  LLK
Sbjct: 46  GKRADQKRERSGEKPLSSKWEKQDRVVGQKDLPRKFEKYTPTTVPLEQVLMEIKDQRLLK 105

Query: 421 RPEKLRSDPDKRNKNKYCMFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDRSKRPL 480
            PE +++ P+KR+K +YC+FH DHGHAT +C  L++E+E LIR+GY K +V +D    P 
Sbjct: 106 WPETMKAPPNKRSKGRYCLFHRDHGHATLDCFDLKEEVEGLIRKGYLKEYV-DDLKATPN 165

Query: 481 PADQGKGGANPLFEIQTISGGSSEE 503
             +  K   +P  EI+TI GGS+E+
Sbjct: 166 RENDNK---SPTREIRTIMGGSTEQ 186

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BLAST of Lag0004986 vs. ExPASy TrEMBL
Match: A0A6J1E1B3 (uncharacterized protein LOC111025521 OS=Momordica charantia OX=3673 GN=LOC111025521 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.0e-17
Identity = 56/130 (43.08%), Postives = 79/130 (60.77%), Query Frame = 0


Query: 362 NNARTKSEARAKSEADQRPKSHRAVRNQKARFDRYTPLTASSEQVLAPIQDT---NLLKR 421
           + ++ K  + + S+AD R     + RN+   ++RYTP T  S ++L  I++T    LLKR
Sbjct: 159 SKSKDKGSSSSSSQADYRRSD--SSRNRSRPYERYTPTTIPSSEILTNIEETGMEKLLKR 218

Query: 422 PEKLRSDPDKRNKNKYCMFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDRSKRPLP 481
           P+KLR DP+KRNK+KYC FH DHGH T  C +L+ +IE LI+ GY K FVG  RS     
Sbjct: 219 PKKLRGDPEKRNKDKYCRFHRDHGHNTSNCWELKRQIEDLIQYGYFKKFVGKSRSSSVEK 278

Query: 482 ADQGKGGANP 489
            ++ K    P
Sbjct: 279 KEERKRSRTP 286

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BLAST of Lag0004986 vs. ExPASy TrEMBL
Match: A0A2N9HH57 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39384 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.9e-17
Identity = 57/151 (37.75%), Postives = 85/151 (56.29%), Query Frame = 0


Query: 379 RPKSHRAVRNQKARFDRYTPLTASSEQVLAPIQDTNLLKRPEKLRSDPDKRNKNKYCMFH 438
           +P++ +       +F  +TPL    +++L  IQD   L+ P K+RSDP+ R KN YC FH
Sbjct: 371 KPRNVKRTTAPPVKFSSFTPLNTPIDKLLLQIQDDPSLRWPGKIRSDPNSRPKNLYCRFH 430

Query: 439 GDHGHATRECIQLRDEIEALIREGYPKGFVGNDRSKRPL--PADQGKGGAN---PLFEIQ 498
            DHGH T EC+ L+++IE LIR+G  + +V    + RP   PA + +   N   P+ EI+
Sbjct: 431 RDHGHLTEECVALKEQIETLIRQGKLQKYVNRPTNTRPAKPPAQREQAEPNRPGPVGEIR 490

Query: 499 TISGGSSEEGGAAHGEQKMSRECYFMALGNI 525
           TI GG      A+ G  + SR+ Y   + NI
Sbjct: 491 TIVGGP-----ASGGTSRASRKAYARQVHNI 516

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BLAST of Lag0004986 vs. ExPASy TrEMBL
Match: A0A2N9FE79 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13364 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.9e-17
Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 0


Query: 392 RFDRYTPLTASSEQVLAPIQDTNLLKRPEKLRSDPDKRNKNKYCMFHGDHGHATRECIQL 451
           +F  +TPL    +++L  IQD   L+ P K+RSDP+ R KN YC FH DHGH T EC+ L
Sbjct: 357 KFSSFTPLNTPIDKLLLQIQDDPSLRWPGKIRSDPNSRPKNLYCRFHRDHGHLTEECVAL 416

Query: 452 RDEIEALIREGYPKGFVGNDRSKRPL--PADQGKGGAN---PLFEIQTISGGSSEEGGAA 511
           +++IE LIR+G  + +V    + RP   PA + +   N   P+ EI+TI GG      A+
Sbjct: 417 KEQIETLIRQGKLQKYVSRPTNTRPAKPPAQREQAEHNRPGPVGEIRTIVGGP-----AS 476

Query: 512 HGEQKMSRECYFMALGNI 525
            G  + SR+ Y   + NI
Sbjct: 477 GGTSRASRKAYARQVHNI 489

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BLAST of Lag0004986 vs. ExPASy TrEMBL
Match: A0A7N2N9G0 (Reverse transcriptase OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 8.7e-17
Identity = 67/189 (35.45%), Postives = 97/189 (51.32%), Query Frame = 0


Query: 340 AQSQKKARRSSPQKTASGTYTGNNARTKSEARAKSEADQRPKSHRAVRNQKARFDRYTPL 399
           A+    AR   P+K             + + R K+    R +  R  R    RF  +TPL
Sbjct: 667 AEDALLAREEKPRKRER-----QEDNRQDQGRKKTRTGDR-REERRPRPMGGRFTSFTPL 726

Query: 400 TASSEQVLAPIQDTNLLKRPEKLRSDPDKRNKNKYCMFHGDHGHATRECIQLRDEIEALI 459
           TA  +QVL  I+D   L  P KL+SDP+KR+++KYC FH DHGH T +C  L+ +IEALI
Sbjct: 727 TAPVDQVLMQIKDEEALTFPGKLKSDPNKRSRDKYCRFHRDHGHDTADCYDLKQQIEALI 786

Query: 460 REGYPKGFVGNDRSKRPL----PADQGKGGANPLFEIQTISGGSSEEGGAAHGEQKMSRE 519
           R+G  + FV  +R+  P     P    +    P+ +I+ I GG+     AA G  K +R+
Sbjct: 787 RQGKLQRFVSKERADPPAQDQHPRRDNERPRPPIGDIRMIVGGT-----AAAGSSKKARK 844

Query: 520 CYFMALGNI 525
            Y   + N+
Sbjct: 847 TYLRMVQNV 844

The following BLAST results are available for this feature:

BLAST of Lag0004986 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_030955724.1	9.2e-21	41.88	uncharacterized protein LOC115977839 [Quercus lobata]	[more]
XP_030950020.1	1.2e-20	41.45	uncharacterized protein LOC115973918 [Quercus lobata]	[more]
XP_030924801.1	1.0e-19	40.79	uncharacterized protein LOC115951796 [Quercus lobata] >XP_030958401.1 uncharacte...	[more]
XP_030970531.1	1.3e-19	37.24	uncharacterized protein LOC115990904 [Quercus lobata]	[more]
XP_030970555.1	3.0e-19	39.18	uncharacterized protein LOC115990928 [Quercus lobata]	[more]

BLAST of Lag0004986 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0004986 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZ52	1.6e-18	41.38	uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1E1B3	1.0e-17	43.08	uncharacterized protein LOC111025521 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A2N9HH57	3.9e-17	37.75	Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39384 PE=4 SV=1	[more]
A0A2N9FE79	3.9e-17	40.58	Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13364 PE=4 SV=1	[more]
A0A7N2N9G0	8.7e-17	35.45	Reverse transcriptase OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Lag0004986 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..346
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..367
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 368..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 395..410
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 528..553
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..433
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 416..433
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0004986.1	Lag0004986.1	mRNA