Lag0004899 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0004899
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr6: 8245958 .. 8246917 (+)
RNA-Seq Expression	Lag0004899
Synteny	Lag0004899

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTCACTATTAGCAGAAAACTTTACCCTGTTGCTACAGGAACTAACCAACAAAACACCAATTGTTCTTCCTGCCCTTACGACTGCCCTTTCGACTGCTACGGTTTTCCAGATTTCTACTTCTCGCCGCCGCCGCCGTCTCCTCCTTACGCCGATCACCAAAATAATCCACTTCAACCTTTAACCATCGTCCTGATTGCTCTGTTTGTCGGGGTTTTCTTCGCTTTCAGTTTCTATATCGTCGTCGTTAAATGCCGGGCCTGCTGCAGTGGCTCCCGGAACAGGGGGGAGGAGCCGTCGCAATCGGACGGGGGAGAGGGAGAGTTTCTGCACGAGAATCAAGTCGATCATCCAATTTGGTTCATCACCACCGTGGGGCTGCAGCAATCGGTCATCAATTCGATCACGGTTTGCAAGTACAAGAAAGGCGAAGGTCTGATCGAAGGAACAGAGTGCTCTGTTTGTTTGAGTGAATTTCAAGAAGAAGAAATGCTTCGGCTGTTGCCCAAATGCAGCCACGCCTTTCATATTGGCTGTGTGGATACTTGGCTGAGAACCCACACCACTTGCCCTCTCTGTCGAGCTCATATTCTGACTGATTTTGCGACCTCCAACACTGTGAGGCCATCGAATTTGAGTCCTGTGGTTCAAAACGAAGCCAATTCGGGTGTAACTGAACAGACCCAGATGGAAAATGGAGAGATTAATGACGAAGTTGTGAGGGAAAATCAGGGAGTTGTTTCAGGTGGAAGATTTGAAAACAGAGGAGATGCTGTTGATGAACAGAGAGCAGTTGGGATTCAGATTGAGGAGATAGTTCCAAAAGAGGGAAACTTTGAAGCTGAAGACTCTATTGAAAATGGTGAAGTTGAAGGAAATGAGACTTTGAGGAACAATCAAATGGATTCTTCTTCTTCTGATTGTGAAGAAGGTAGATCAGTTAAAACAGCTACATGA

mRNA sequence

ATGGCAGTCACTATTAGCAGAAAACTTTACCCTGTTGCTACAGGAACTAACCAACAAAACACCAATTGTTCTTCCTGCCCTTACGACTGCCCTTTCGACTGCTACGGTTTTCCAGATTTCTACTTCTCGCCGCCGCCGCCGTCTCCTCCTTACGCCGATCACCAAAATAATCCACTTCAACCTTTAACCATCGTCCTGATTGCTCTGTTTGTCGGGGTTTTCTTCGCTTTCAGTTTCTATATCGTCGTCGTTAAATGCCGGGCCTGCTGCAGTGGCTCCCGGAACAGGGGGGAGGAGCCGTCGCAATCGGACGGGGGAGAGGGAGAGTTTCTGCACGAGAATCAAGTCGATCATCCAATTTGGTTCATCACCACCGTGGGGCTGCAGCAATCGGTCATCAATTCGATCACGGTTTGCAAGTACAAGAAAGGCGAAGGTCTGATCGAAGGAACAGAGTGCTCTGTTTGTTTGAGTGAATTTCAAGAAGAAGAAATGCTTCGGCTGTTGCCCAAATGCAGCCACGCCTTTCATATTGGCTGTGTGGATACTTGGCTGAGAACCCACACCACTTGCCCTCTCTGTCGAGCTCATATTCTGACTGATTTTGCGACCTCCAACACTGTGAGGCCATCGAATTTGAGTCCTGTGGTTCAAAACGAAGCCAATTCGGGTGTAACTGAACAGACCCAGATGGAAAATGGAGAGATTAATGACGAAGTTGTGAGGGAAAATCAGGGAGTTGTTTCAGGTGGAAGATTTGAAAACAGAGGAGATGCTGTTGATGAACAGAGAGCAGTTGGGATTCAGATTGAGGAGATAGTTCCAAAAGAGGGAAACTTTGAAGCTGAAGACTCTATTGAAAATGGTGAAGTTGAAGGAAATGAGACTTTGAGGAACAATCAAATGGATTCTTCTTCTTCTGATTGTGAAGAAGGTAGATCAGTTAAAACAGCTACATGA

Coding sequence (CDS)

ATGGCAGTCACTATTAGCAGAAAACTTTACCCTGTTGCTACAGGAACTAACCAACAAAACACCAATTGTTCTTCCTGCCCTTACGACTGCCCTTTCGACTGCTACGGTTTTCCAGATTTCTACTTCTCGCCGCCGCCGCCGTCTCCTCCTTACGCCGATCACCAAAATAATCCACTTCAACCTTTAACCATCGTCCTGATTGCTCTGTTTGTCGGGGTTTTCTTCGCTTTCAGTTTCTATATCGTCGTCGTTAAATGCCGGGCCTGCTGCAGTGGCTCCCGGAACAGGGGGGAGGAGCCGTCGCAATCGGACGGGGGAGAGGGAGAGTTTCTGCACGAGAATCAAGTCGATCATCCAATTTGGTTCATCACCACCGTGGGGCTGCAGCAATCGGTCATCAATTCGATCACGGTTTGCAAGTACAAGAAAGGCGAAGGTCTGATCGAAGGAACAGAGTGCTCTGTTTGTTTGAGTGAATTTCAAGAAGAAGAAATGCTTCGGCTGTTGCCCAAATGCAGCCACGCCTTTCATATTGGCTGTGTGGATACTTGGCTGAGAACCCACACCACTTGCCCTCTCTGTCGAGCTCATATTCTGACTGATTTTGCGACCTCCAACACTGTGAGGCCATCGAATTTGAGTCCTGTGGTTCAAAACGAAGCCAATTCGGGTGTAACTGAACAGACCCAGATGGAAAATGGAGAGATTAATGACGAAGTTGTGAGGGAAAATCAGGGAGTTGTTTCAGGTGGAAGATTTGAAAACAGAGGAGATGCTGTTGATGAACAGAGAGCAGTTGGGATTCAGATTGAGGAGATAGTTCCAAAAGAGGGAAACTTTGAAGCTGAAGACTCTATTGAAAATGGTGAAGTTGAAGGAAATGAGACTTTGAGGAACAATCAAATGGATTCTTCTTCTTCTGATTGTGAAGAAGGTAGATCAGTTAAAACAGCTACATGA

Protein sequence

MAVTISRKLYPVATGTNQQNTNCSSCPYDCPFDCYGFPDFYFSPPPPSPPYADHQNNPLQPLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPIWFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGCVDTWLRTHTTCPLCRAHILTDFATSNTVRPSNLSPVVQNEANSGVTEQTQMENGEINDEVVRENQGVVSGGRFENRGDAVDEQRAVGIQIEEIVPKEGNFEAEDSIENGEVEGNETLRNNQMDSSSSDCEEGRSVKTAT

Homology

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BLAST of Lag0004899 vs. NCBI nr
Match: XP_038884462.1 (RING-H2 finger protein ATL54-like [Benincasa hispida])

HSP 1 Score: 451.1 bits (1159), Expect = 8.2e-123
Identity = 229/307 (74.59%), Postives = 248/307 (80.78%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSSCPYDCPFDCYGFPDFYFSPPPPSPPYADHQNNPLQ 60
           MAVTISRKL+PVATGT Q  TNCS CPYDCPFDCYG PDFY+S PPP PP ADHQ     
Sbjct: 1   MAVTISRKLFPVATGTTQPTTNCSGCPYDCPFDCYGIPDFYYSQPPPPPPLADHQKQ--L 60

Query: 61  PLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPI 120
           P  I+++ LFVG F AFSFYI+VVKCR+  SGS N G E  QSDGGEGEF++ENQVDHPI
Sbjct: 61  PTLIIILLLFVGFFIAFSFYIIVVKCRSWQSGSGNEGTEALQSDGGEGEFMNENQVDHPI 120

Query: 121 WFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGC 180
           WFITT GLQQSVINSITVCKYKK EGLIEGTECSVCLSEFQE+EMLRLLPKCSHAFHIGC
Sbjct: 121 WFITTAGLQQSVINSITVCKYKKSEGLIEGTECSVCLSEFQEDEMLRLLPKCSHAFHIGC 180

Query: 181 VDTWLRTHTTCPLCRAHILTDFATSNTVRPSNLSPVVQNEANSGVTEQTQMENGEINDEV 240
           VDTWLRTHTTCPLCRAHILTDF  SN+VRP NL PV QNEAN GV E+TQMEN EIN EV
Sbjct: 181 VDTWLRTHTTCPLCRAHILTDFTASNSVRPPNLGPVNQNEANLGVNEETQMENEEINGEV 240

Query: 241 VRENQGVVSGGRFENRGDAVDEQRAVGIQIEEIVPKEGNFEAEDSIENGEVEGNETLRNN 300
           + EN+GVVS G FENRGD VDEQR VGI            + +DS    +VEGNE+ RNN
Sbjct: 241 LVENEGVVSRGNFENRGDVVDEQREVGI-----------VQTDDS----KVEGNESTRNN 290

Query: 301 QMDSSSS 308
           QMDSSS+
Sbjct: 301 QMDSSSA 290

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BLAST of Lag0004899 vs. NCBI nr
Match: XP_011649673.1 (RING-H2 finger protein ATL54 [Cucumis sativus] >KGN62717.1 hypothetical protein Csa_022380 [Cucumis sativus])

HSP 1 Score: 439.9 bits (1130), Expect = 1.9e-119
Identity = 222/311 (71.38%), Postives = 253/311 (81.35%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSSCPYDCPFDCYGFPDFYFSPPPPSPPYADHQNNPLQ 60
           MAVT+SRKL+PVATGT    TNCS+CPYDCP+DCYGFPD YFSPPPP PP +DHQ     
Sbjct: 1   MAVTLSRKLFPVATGTALPTTNCSACPYDCPYDCYGFPDLYFSPPPPPPPLSDHQKQ--L 60

Query: 61  PLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPI 120
           P TI+++ LF+  F AF+FYI+VVKCR+  SGS N G E  QSDGGEGEF++ENQVDHPI
Sbjct: 61  PTTIIILILFIAFFVAFTFYIIVVKCRSWYSGSANEGAEALQSDGGEGEFMNENQVDHPI 120

Query: 121 WFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGC 180
           WFITT GLQQSVINSITVCKYKK EGLIEGT+CSVCLSEFQE+EMLRLLPKCSHAFHIGC
Sbjct: 121 WFITTAGLQQSVINSITVCKYKKSEGLIEGTDCSVCLSEFQEDEMLRLLPKCSHAFHIGC 180

Query: 181 VDTWLRTHTTCPLCRAHILTDFATSNTVRPSNLSPVVQNEANSGVTEQTQMENGEINDEV 240
           VDTWLRTHTTCPLCRAHILTDF T N+VRP N+ P+ QNE N G+ E TQMEN   N E 
Sbjct: 181 VDTWLRTHTTCPLCRAHILTDFTTPNSVRPPNIGPLNQNEGNLGLNEDTQMENENTNREA 240

Query: 241 VRENQG---VVSGGRFENRGDAVDEQRAVGIQIEEIVPKEGNFEAEDSIENGEVEGNETL 300
           VREN+G    +S    ENRGDAVDEQR    ++EEIV KEGNFE++DS    +VEGNE++
Sbjct: 241 VRENEGGGVSISSESSENRGDAVDEQR----EVEEIVQKEGNFESDDS----KVEGNESM 300

Query: 301 RN-NQMDSSSS 308
           RN NQM+SSS+
Sbjct: 301 RNDNQMNSSST 301

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BLAST of Lag0004899 vs. NCBI nr
Match: XP_008444871.1 (PREDICTED: RING-H2 finger protein ATL54-like [Cucumis melo] >KAA0065127.1 RING-H2 finger protein ATL54-like [Cucumis melo var. makuwa])

HSP 1 Score: 431.8 bits (1109), Expect = 5.2e-117
Identity = 223/313 (71.25%), Postives = 250/313 (79.87%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSSCPYDCPFDCYGFPDFYFSPPPPSPPYADHQNNPLQ 60
           MAVT SRKL+PVATGT Q  TNCS+CPYDCP+DCYGFPD YFSPPPP PP  DHQ     
Sbjct: 1   MAVTHSRKLFPVATGTTQPTTNCSACPYDCPYDCYGFPDLYFSPPPPPPPLFDHQKQ--L 60

Query: 61  PLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPI 120
           P  I+++ LFV  F AF+FYI+VVKCR+  SGS N G E  QSDGGEGEF++ENQVDHPI
Sbjct: 61  PTMIIVLILFVAFFIAFTFYIIVVKCRSWYSGSGNEGAEALQSDGGEGEFMNENQVDHPI 120

Query: 121 WFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGC 180
           WFITT GLQQSVINSITVCKYKK EGLIEGT+CSVCLSEFQE+EMLRLLPKCSHAFHIGC
Sbjct: 121 WFITTAGLQQSVINSITVCKYKKSEGLIEGTDCSVCLSEFQEDEMLRLLPKCSHAFHIGC 180

Query: 181 VDTWLRTHTTCPLCRAHILTDFAT--SNTVRPSNLSPVVQNEANSGVTEQTQMENGEIND 240
           VDTWLRTHTTCPLCRAHILTDF T  SN++RP NL P+ QNE N G+ E TQMEN  IN 
Sbjct: 181 VDTWLRTHTTCPLCRAHILTDFTTSNSNSIRPPNLGPLNQNEGNLGLNEDTQMENENING 240

Query: 241 EVVRENQG---VVSGGRFENRGDAVDEQRAVGIQIEEIVPKEGNFEAEDSIENGEVEGNE 300
           E VREN+G    +S    ENRGD VDEQR    ++EEIV KEGNFE++DS    +VEGNE
Sbjct: 241 EAVRENEGGVVSISSESSENRGDVVDEQR----EVEEIVQKEGNFESDDS----KVEGNE 300

Query: 301 TLRN-NQMDSSSS 308
           + RN N+M SSS+
Sbjct: 301 STRNDNRMYSSST 303

[Close]

BLAST of Lag0004899 vs. NCBI nr
Match: XP_023546737.1 (RING-H2 finger protein ATL54-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414.5 bits (1064), Expect = 8.5e-112
Identity = 213/300 (71.00%), Postives = 240/300 (80.00%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSSCPYDCPFDCYGFPDFYFSPPPPSPPYADHQNNPLQ 60
           MAV I+RKL+PVATGT+QQ+ NCS+CPYDCP DC   PDFYFSPPPP PP+ DHQ   L 
Sbjct: 1   MAVGITRKLFPVATGTHQQSFNCSACPYDCPLDCLDLPDFYFSPPPPPPPFDDHQKQ-LP 60

Query: 61  PLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPI 120
            + IV++ALFVG FF FSFYI+VVKC+A  SGS N+G E SQ DG +GEFL+ENQVDHPI
Sbjct: 61  TIVIVILALFVGFFFTFSFYIIVVKCQAWRSGSGNQGAETSQLDGEDGEFLNENQVDHPI 120

Query: 121 WFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGC 180
           WFITTVGLQQS+INSITVCKYKKGEGLIEGT CSVCL+EFQE+E+LRLLPKCSHAFHIGC
Sbjct: 121 WFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDELLRLLPKCSHAFHIGC 180

Query: 181 VDTWLRTHTTCPLCRAHILTDFATSNTVRPSNLSPVVQNEANSGVTEQTQMENGEINDEV 240
           VDTWLRTHTTCPLCRAHILTDF TSNT RP N   + QNEAN  V E+TQMEN E     
Sbjct: 181 VDTWLRTHTTCPLCRAHILTDFPTSNTARPPNSGHLNQNEANLVVIEETQMENLE----- 240

Query: 241 VRENQGVVSGGRFENRGDAVDEQRAVGI-QIEEIVPKEGNFEAEDSIENGEVEGNETLRN 300
             E   V  GG  ENRGDAVDEQR +G+  I EIVPKEG FE++DS    ++E NET+ N
Sbjct: 241 GEEQSAVSGGGGVENRGDAVDEQRDIGVPPIGEIVPKEGVFESDDS----KMEVNETMMN 290

[Close]

BLAST of Lag0004899 vs. NCBI nr
Match: KAG6598705.1 (RING-H2 finger protein ATL54, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 407.1 bits (1045), Expect = 1.4e-109
Identity = 210/302 (69.54%), Postives = 238/302 (78.81%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSSCPYDCPFDCYGFPDFYFSPPPPS--PPYADHQNNP 60
           MAV I+RKL+PVA GT+QQ+ NCS+CPYDCPFDC   PDFYFSPPPP   PP+ DHQ   
Sbjct: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFSPPPPPPLPPFGDHQKQ- 60

Query: 61  LQPLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDH 120
           L  + IV++ALFVG FF FSFYI++VKC+A  SGS N+G E SQ +G +GEFL+ENQVDH
Sbjct: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120

Query: 121 PIWFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHI 180
           PIWFITTVGLQQS+INSITVCKYKKGEGLIEGT CSVCL+EFQE+EMLRLLPKCSHAFHI
Sbjct: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180

Query: 181 GCVDTWLRTHTTCPLCRAHILTDFATSNTVRPSNLSPVVQNEANSGVTEQTQMENGEIND 240
           GCVDTWLRTHTTCPLCRAHILTDF TSN  RP N   + QNEAN GV ++TQMEN E   
Sbjct: 181 GCVDTWLRTHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIQETQMENLE--- 240

Query: 241 EVVRENQGVVSGGRFENRGDAVDEQRAVGI-QIEEIVPKEGNFEAEDSIENGEVEGNETL 300
               E   V  GG  ENRGDAVDEQR +G+ QI EI PKEG FE++DS    ++E  ET 
Sbjct: 241 --GEEQSAVSGGGGVENRGDAVDEQRDIGVPQIGEIAPKEGVFESDDS----KMEVTETT 292

[Close]

BLAST of Lag0004899 vs. ExPASy Swiss-Prot
Match: Q8LFY8 (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2)

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-41
Identity = 112/285 (39.30%), Postives = 148/285 (51.93%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSS--CPYDCPFDCYGFPDFY---------FSPPPPSP 60
           MA    RKL+P       +  +CS+  C   CP++CY  PD+Y          S P PSP
Sbjct: 1   MARKKHRKLFPTLASETNKTLDCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSP 60

Query: 61  -----------PYADHQNNPLQPLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGE 120
                      P  D  ++ L  ++I+ I   V       F++ V K  +      N+G 
Sbjct: 61  CPSPSISAVYLPSQD-SSSSLDAISIITITGAVLAILLTGFFL-VAKFFSDSVNRVNQGT 120

Query: 121 EPSQSDGG----EGEFLHENQVDHPIWFITTVGLQQSVINSITVCKYKKGEGLIEGTECS 180
             S ++      E EF    QVDHPIW I T GLQQS+INSIT+C YK+G+GLIE T+C 
Sbjct: 121 YQSDNEDNDTVMEEEFQDREQVDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCP 180

Query: 181 VCLSEFQEEEMLRLLPKCSHAFHIGCVDTWLRTHTTCPLCRAHILTDFATSNTVRPSNLS 240
           VCL+EF+E+E LRLLPKC+HAFHI C+DTWL +HT CPLCRA I    A  +   P    
Sbjct: 181 VCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGI----AMISVTTPRYSG 240

Query: 241 PVVQNEANSGVTEQTQMENGEINDEVVRENQGVVSGGRFENRGDA 260
           PV      SG    + +EN  +++E           G  ENR D+
Sbjct: 241 PVEVTPGGSG----SHLENDGVDEE---------DHGEIENRVDS 266

[Close]

BLAST of Lag0004899 vs. ExPASy Swiss-Prot
Match: Q9LX93 (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 7.9e-36
Identity = 80/171 (46.78%), Postives = 107/171 (62.57%), Query Frame = 0


Query: 34  CYGFPDFYFS----PPPPSPPYADHQNNPLQPLTIVLI-ALFVGVFFAFSFYIVVVKCRA 93
           C  F D  F     PPPP PP    + + L P +I ++ ++ + +F  F  Y+ + + R 
Sbjct: 12  CLQFKDLRFCFRQYPPPPPPPPPPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRR 71

Query: 94  CCSGSRNRGEEPSQSDGGEGEFLHENQVDHPIWFITTVGLQQSVINSITVCKYKKGEGLI 153
             + S   G+   Q D  E E    +   H +W I TVGL +S INSITV  +KKGEG+I
Sbjct: 72  ISAASVTPGDTNQQEDEDETEERDFSDFHH-VWQIPTVGLHRSAINSITVVGFKKGEGII 131

Query: 154 EGTECSVCLSEFQEEEMLRLLPKCSHAFHIGCVDTWLRTHTTCPLCRAHIL 200
           +GTECSVCL+EF+E+E LRLLPKCSHAFH+ C+DTWL +H  CPLCRA +L
Sbjct: 132 DGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVL 181

[Close]

BLAST of Lag0004899 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 2.0e-31
Identity = 78/191 (40.84%), Postives = 104/191 (54.45%), Query Frame = 0


Query: 22  NCSS--CPYDCPFDCYGFPDFYFSPPPP---SPPYADHQNNPL-QPLTIVLIALFVGVFF 81
           +CS   C   CP  CY    F F PPPP   +   AD  + P+  PL I +I +    F 
Sbjct: 16  DCSQGLCSMYCPQWCY----FIFPPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLASAFL 75

Query: 82  AFSFYIVVVK-------CRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPIWFIT-TVG 141
             S+Y  + K        R    GS + G       G  G   H     H  W ++   G
Sbjct: 76  LVSYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVSPPSG 135

Query: 142 LQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGCVDTWLRT 199
           L +++IN ITVCKY++G+G +  T+CSVCL EF + E LRLLP+CSHAFH  C+DTWL++
Sbjct: 136 LDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKS 195

[Close]

BLAST of Lag0004899 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.7e-30
Identity = 82/208 (39.42%), Postives = 113/208 (54.33%), Query Frame = 0


Query: 22  NCSS--CPYDCPFDCYGFPDFYFSPPPPS---PPYADHQNNPLQPLTIVLIALFVGVFFA 81
           +CS   C   CP  CY      F PPPPS      +   ++   PL I LI +       
Sbjct: 16  DCSQGICNIYCPQWCY----LIFPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALIL 75

Query: 82  FSFYIVVVK-CRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPIWFITTVGLQQSVINS 141
            S+Y ++ K C        +  E  + +  GEG F    ++          GL +S+I S
Sbjct: 76  VSYYTLISKYCHR--HHQTSSSETLNLNHNGEGFFSSTQRIS-----TNGDGLNESMIKS 135

Query: 142 ITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGCVDTWLRTHTTCPLCR 201
           ITV KYK G+G ++G++CSVCLSEF+E E LRLLPKC+HAFH+ C+DTWL++H+ CPLCR
Sbjct: 136 ITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCR 195

Query: 202 AHILTDFATSNTVRPSNLSPVVQNEANS 224
           A + T           N+S VV N++NS
Sbjct: 196 AFV-TGVNNPTASVGQNVSVVVANQSNS 211

[Close]

BLAST of Lag0004899 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 4.7e-28
Identity = 89/257 (34.63%), Postives = 121/257 (47.08%), Query Frame = 0


Query: 22  NCSS--CPYDCPFDCYGFPDFYFSPPPPS---PPYADHQNNPLQPLTIVLIALFVGVFFA 81
           +CS   C   CP  CY        PPPPS       D  ++   PL I LI +    F  
Sbjct: 19  DCSQGVCSVYCPQWCY-----VIFPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFIL 78

Query: 82  FSFYIVVVK-------------------------CRACCSGSRNRGEEPSQSDGGEGEFL 141
            S+Y ++ K                          +   + + N    P+Q+ GG G   
Sbjct: 79  VSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGG--- 138

Query: 142 HENQVDHPIWFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPK 201
                          GL +S+I SITV KY+K +G +E ++CSVCLSEFQE E LRLLPK
Sbjct: 139 -------------GDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPK 198

Query: 202 CSHAFHIGCVDTWLRTHTTCPLCRAHILTDFATSNTVRPSNLSPVVQNEA-----NSGVT 244
           C+HAFH+ C+DTWL++H+ CPLCRA I+T  A    V  +N   V +N +     +S V 
Sbjct: 199 CNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAV-EIVDLTNQQIVTENNSISTGDDSVVV 253

[Close]

BLAST of Lag0004899 vs. ExPASy TrEMBL
Match: A0A0A0LPJ4 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G369190 PE=3 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 9.2e-120
Identity = 222/311 (71.38%), Postives = 253/311 (81.35%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSSCPYDCPFDCYGFPDFYFSPPPPSPPYADHQNNPLQ 60
           MAVT+SRKL+PVATGT    TNCS+CPYDCP+DCYGFPD YFSPPPP PP +DHQ     
Sbjct: 1   MAVTLSRKLFPVATGTALPTTNCSACPYDCPYDCYGFPDLYFSPPPPPPPLSDHQKQ--L 60

Query: 61  PLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPI 120
           P TI+++ LF+  F AF+FYI+VVKCR+  SGS N G E  QSDGGEGEF++ENQVDHPI
Sbjct: 61  PTTIIILILFIAFFVAFTFYIIVVKCRSWYSGSANEGAEALQSDGGEGEFMNENQVDHPI 120

Query: 121 WFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGC 180
           WFITT GLQQSVINSITVCKYKK EGLIEGT+CSVCLSEFQE+EMLRLLPKCSHAFHIGC
Sbjct: 121 WFITTAGLQQSVINSITVCKYKKSEGLIEGTDCSVCLSEFQEDEMLRLLPKCSHAFHIGC 180

Query: 181 VDTWLRTHTTCPLCRAHILTDFATSNTVRPSNLSPVVQNEANSGVTEQTQMENGEINDEV 240
           VDTWLRTHTTCPLCRAHILTDF T N+VRP N+ P+ QNE N G+ E TQMEN   N E 
Sbjct: 181 VDTWLRTHTTCPLCRAHILTDFTTPNSVRPPNIGPLNQNEGNLGLNEDTQMENENTNREA 240

Query: 241 VRENQG---VVSGGRFENRGDAVDEQRAVGIQIEEIVPKEGNFEAEDSIENGEVEGNETL 300
           VREN+G    +S    ENRGDAVDEQR    ++EEIV KEGNFE++DS    +VEGNE++
Sbjct: 241 VRENEGGGVSISSESSENRGDAVDEQR----EVEEIVQKEGNFESDDS----KVEGNESM 300

Query: 301 RN-NQMDSSSS 308
           RN NQM+SSS+
Sbjct: 301 RNDNQMNSSST 301

[Close]

BLAST of Lag0004899 vs. ExPASy TrEMBL
Match: A0A5A7VDK2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004620 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 2.5e-117
Identity = 223/313 (71.25%), Postives = 250/313 (79.87%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSSCPYDCPFDCYGFPDFYFSPPPPSPPYADHQNNPLQ 60
           MAVT SRKL+PVATGT Q  TNCS+CPYDCP+DCYGFPD YFSPPPP PP  DHQ     
Sbjct: 1   MAVTHSRKLFPVATGTTQPTTNCSACPYDCPYDCYGFPDLYFSPPPPPPPLFDHQKQ--L 60

Query: 61  PLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPI 120
           P  I+++ LFV  F AF+FYI+VVKCR+  SGS N G E  QSDGGEGEF++ENQVDHPI
Sbjct: 61  PTMIIVLILFVAFFIAFTFYIIVVKCRSWYSGSGNEGAEALQSDGGEGEFMNENQVDHPI 120

Query: 121 WFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGC 180
           WFITT GLQQSVINSITVCKYKK EGLIEGT+CSVCLSEFQE+EMLRLLPKCSHAFHIGC
Sbjct: 121 WFITTAGLQQSVINSITVCKYKKSEGLIEGTDCSVCLSEFQEDEMLRLLPKCSHAFHIGC 180

Query: 181 VDTWLRTHTTCPLCRAHILTDFAT--SNTVRPSNLSPVVQNEANSGVTEQTQMENGEIND 240
           VDTWLRTHTTCPLCRAHILTDF T  SN++RP NL P+ QNE N G+ E TQMEN  IN 
Sbjct: 181 VDTWLRTHTTCPLCRAHILTDFTTSNSNSIRPPNLGPLNQNEGNLGLNEDTQMENENING 240

Query: 241 EVVRENQG---VVSGGRFENRGDAVDEQRAVGIQIEEIVPKEGNFEAEDSIENGEVEGNE 300
           E VREN+G    +S    ENRGD VDEQR    ++EEIV KEGNFE++DS    +VEGNE
Sbjct: 241 EAVRENEGGVVSISSESSENRGDVVDEQR----EVEEIVQKEGNFESDDS----KVEGNE 300

Query: 301 TLRN-NQMDSSSS 308
           + RN N+M SSS+
Sbjct: 301 STRNDNRMYSSST 303

[Close]

BLAST of Lag0004899 vs. ExPASy TrEMBL
Match: A0A1S3BAW8 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103488086 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 2.5e-117
Identity = 223/313 (71.25%), Postives = 250/313 (79.87%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSSCPYDCPFDCYGFPDFYFSPPPPSPPYADHQNNPLQ 60
           MAVT SRKL+PVATGT Q  TNCS+CPYDCP+DCYGFPD YFSPPPP PP  DHQ     
Sbjct: 1   MAVTHSRKLFPVATGTTQPTTNCSACPYDCPYDCYGFPDLYFSPPPPPPPLFDHQKQ--L 60

Query: 61  PLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPI 120
           P  I+++ LFV  F AF+FYI+VVKCR+  SGS N G E  QSDGGEGEF++ENQVDHPI
Sbjct: 61  PTMIIVLILFVAFFIAFTFYIIVVKCRSWYSGSGNEGAEALQSDGGEGEFMNENQVDHPI 120

Query: 121 WFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGC 180
           WFITT GLQQSVINSITVCKYKK EGLIEGT+CSVCLSEFQE+EMLRLLPKCSHAFHIGC
Sbjct: 121 WFITTAGLQQSVINSITVCKYKKSEGLIEGTDCSVCLSEFQEDEMLRLLPKCSHAFHIGC 180

Query: 181 VDTWLRTHTTCPLCRAHILTDFAT--SNTVRPSNLSPVVQNEANSGVTEQTQMENGEIND 240
           VDTWLRTHTTCPLCRAHILTDF T  SN++RP NL P+ QNE N G+ E TQMEN  IN 
Sbjct: 181 VDTWLRTHTTCPLCRAHILTDFTTSNSNSIRPPNLGPLNQNEGNLGLNEDTQMENENING 240

Query: 241 EVVRENQG---VVSGGRFENRGDAVDEQRAVGIQIEEIVPKEGNFEAEDSIENGEVEGNE 300
           E VREN+G    +S    ENRGD VDEQR    ++EEIV KEGNFE++DS    +VEGNE
Sbjct: 241 EAVRENEGGVVSISSESSENRGDVVDEQR----EVEEIVQKEGNFESDDS----KVEGNE 300

Query: 301 TLRN-NQMDSSSS 308
           + RN N+M SSS+
Sbjct: 301 STRNDNRMYSSST 303

[Close]

BLAST of Lag0004899 vs. ExPASy TrEMBL
Match: A0A6J1HEB6 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111462708 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 6.6e-110
Identity = 211/302 (69.87%), Postives = 239/302 (79.14%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSSCPYDCPFDCYGFPDFYFSPPP--PSPPYADHQNNP 60
           MAV I+RKL+PVA GT+QQ+ NCS+CPYDCPFDC   PDFYFSPPP  P PP+ DHQ   
Sbjct: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFSPPPPLPLPPFGDHQKQ- 60

Query: 61  LQPLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDH 120
           L  + IV++ALFVG FF FSFYI++VKC+A  SGS N+G E SQ +G +GEFL+ENQVDH
Sbjct: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120

Query: 121 PIWFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHI 180
           PIWFITTVGLQQS+INSITVCKYKKGEGLIEGT CSVCL+EFQE+EMLRLLPKCSHAFHI
Sbjct: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180

Query: 181 GCVDTWLRTHTTCPLCRAHILTDFATSNTVRPSNLSPVVQNEANSGVTEQTQMENGEIND 240
           GCVDTWLRTHTTCPLCRAHILTDF TSN  RP N   + QNEAN GV E+TQMEN E   
Sbjct: 181 GCVDTWLRTHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIEETQMENLE--- 240

Query: 241 EVVRENQGVVSGGRFENRGDAVDEQRAVGI-QIEEIVPKEGNFEAEDSIENGEVEGNETL 300
               E   V  GG  ENRGDAV EQR +G+ QI EIVPKEG FE++DS    ++E  ET+
Sbjct: 241 --GEEQSAVSGGGGVENRGDAVYEQRDIGVPQIGEIVPKEGVFESDDS----KMEVTETM 292

[Close]

BLAST of Lag0004899 vs. ExPASy TrEMBL
Match: A0A6J1K4G1 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111492196 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.9e-109
Identity = 213/300 (71.00%), Postives = 237/300 (79.00%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSSCPYDCPFDCYGFPDFYFSPPPPSPPYADHQNNPLQ 60
           MAV I+RKL+PV TGT+QQ+ NCS CPYDCPFDC   PDFYFSPP   PP+ DHQ   L 
Sbjct: 1   MAVGITRKLFPVETGTHQQSFNCSGCPYDCPFDCLDLPDFYFSPP---PPFGDHQKQ-LP 60

Query: 61  PLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPI 120
            + IV++ALFVG FF FSFYI++VK +A  SGS N+G E SQ DG +GEFL+ENQVDHPI
Sbjct: 61  TIVIVILALFVGFFFTFSFYIIIVKWQAWRSGSGNQGAEASQLDGEDGEFLNENQVDHPI 120

Query: 121 WFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGC 180
           WFITTVGLQQS+INSITVCKYKKGEGLIEGT CSVCL+EFQE+EMLRLLPKCSHAFHIGC
Sbjct: 121 WFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHIGC 180

Query: 181 VDTWLRTHTTCPLCRAHILTDFATSNTVRPSNLSPVVQNEANSGVTEQTQMENGEINDEV 240
           VDTWLRTHTTCPLCRAHILTDFATSN  RP N   V QNEAN  V E+TQMEN E     
Sbjct: 181 VDTWLRTHTTCPLCRAHILTDFATSNFPRPPNSGHVNQNEANLAVIEETQMENLE----- 240

Query: 241 VRENQGVVSGGRFENRGDAVDEQRAVGI-QIEEIVPKEGNFEAEDSIENGEVEGNETLRN 300
             E   V  GG  ENRGDAVDEQR VG+ QI EIVPKEG FE++DS    ++E NET+ N
Sbjct: 241 GEEQSAVSGGGGVENRGDAVDEQRDVGVPQIGEIVPKEGVFESDDS----KMEVNETMMN 287

[Close]

BLAST of Lag0004899 vs. TAIR 10
Match: AT1G72220.1 (RING/U-box superfamily protein )

HSP 1 Score: 171.8 bits (434), Expect = 9.0e-43
Identity = 112/285 (39.30%), Postives = 148/285 (51.93%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSS--CPYDCPFDCYGFPDFY---------FSPPPPSP 60
           MA    RKL+P       +  +CS+  C   CP++CY  PD+Y          S P PSP
Sbjct: 1   MARKKHRKLFPTLASETNKTLDCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSP 60

Query: 61  -----------PYADHQNNPLQPLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGE 120
                      P  D  ++ L  ++I+ I   V       F++ V K  +      N+G 
Sbjct: 61  CPSPSISAVYLPSQD-SSSSLDAISIITITGAVLAILLTGFFL-VAKFFSDSVNRVNQGT 120

Query: 121 EPSQSDGG----EGEFLHENQVDHPIWFITTVGLQQSVINSITVCKYKKGEGLIEGTECS 180
             S ++      E EF    QVDHPIW I T GLQQS+INSIT+C YK+G+GLIE T+C 
Sbjct: 121 YQSDNEDNDTVMEEEFQDREQVDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCP 180

Query: 181 VCLSEFQEEEMLRLLPKCSHAFHIGCVDTWLRTHTTCPLCRAHILTDFATSNTVRPSNLS 240
           VCL+EF+E+E LRLLPKC+HAFHI C+DTWL +HT CPLCRA I    A  +   P    
Sbjct: 181 VCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGI----AMISVTTPRYSG 240

Query: 241 PVVQNEANSGVTEQTQMENGEINDEVVRENQGVVSGGRFENRGDA 260
           PV      SG    + +EN  +++E           G  ENR D+
Sbjct: 241 PVEVTPGGSG----SHLENDGVDEE---------DHGEIENRVDS 266

[Close]

BLAST of Lag0004899 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 152.5 bits (384), Expect = 5.6e-37
Identity = 80/171 (46.78%), Postives = 107/171 (62.57%), Query Frame = 0


Query: 34  CYGFPDFYFS----PPPPSPPYADHQNNPLQPLTIVLI-ALFVGVFFAFSFYIVVVKCRA 93
           C  F D  F     PPPP PP    + + L P +I ++ ++ + +F  F  Y+ + + R 
Sbjct: 12  CLQFKDLRFCFRQYPPPPPPPPPPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRR 71

Query: 94  CCSGSRNRGEEPSQSDGGEGEFLHENQVDHPIWFITTVGLQQSVINSITVCKYKKGEGLI 153
             + S   G+   Q D  E E    +   H +W I TVGL +S INSITV  +KKGEG+I
Sbjct: 72  ISAASVTPGDTNQQEDEDETEERDFSDFHH-VWQIPTVGLHRSAINSITVVGFKKGEGII 131

Query: 154 EGTECSVCLSEFQEEEMLRLLPKCSHAFHIGCVDTWLRTHTTCPLCRAHIL 200
           +GTECSVCL+EF+E+E LRLLPKCSHAFH+ C+DTWL +H  CPLCRA +L
Sbjct: 132 DGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVL 181

[Close]

BLAST of Lag0004899 vs. TAIR 10
Match: AT4G33565.1 (RING/U-box superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-33
Identity = 87/239 (36.40%), Postives = 134/239 (56.07%), Query Frame = 0


Query: 48  SPPYADHQNNPLQPLTIVLIALFVGVFFAFSFYIVVVKC----RACCSGSRNRGEEPSQS 107
           SPP   H ++ L+ + I+  +  +   F  +  ++  K     R   + SR    E +++
Sbjct: 110 SPPAEIHHDDNLKRILIISASSIITTLFLLTLLVLCFKFYYRRRRSITTSRRWSMEEARN 169

Query: 108 DGGEGEFLHENQVDHPIWFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEE 167
              +G       VDHPIW I T+GL  +VI+SI VC+Y K +G++EGT+CSVCLSEF+EE
Sbjct: 170 WDFDGP--APVIVDHPIWHIRTIGLNPTVISSIKVCQYSKKDGVVEGTDCSVCLSEFEEE 229

Query: 168 EMLRLLPKCSHAFHIGCVDTWLRTHTTCPLCRAHILTDFATSNTVRPSNLSPVVQNEANS 227
           E LRLLPKC HAFH+ C+DTWLR+HT CPLCRA I+     +NT+   +      +E   
Sbjct: 230 ETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPIV----EANTMIDDH------SEGLE 289

Query: 228 GVTEQTQMENGEINDEVVRENQGVVSGGRFENRGDAVDE--QRAV------GIQIEEIV 275
            ++     ENG+  DE + E +         + G++  +  +R+V      G+++ E+V
Sbjct: 290 EISVMIPEENGDDTDEEIEEERDGFVSNISRDHGESQQQRVRRSVSLDSLSGLRVSEVV 336

[Close]

BLAST of Lag0004899 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-31
Identity = 82/208 (39.42%), Postives = 113/208 (54.33%), Query Frame = 0


Query: 22  NCSS--CPYDCPFDCYGFPDFYFSPPPPS---PPYADHQNNPLQPLTIVLIALFVGVFFA 81
           +CS   C   CP  CY      F PPPPS      +   ++   PL I LI +       
Sbjct: 16  DCSQGICNIYCPQWCY----LIFPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALIL 75

Query: 82  FSFYIVVVK-CRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPIWFITTVGLQQSVINS 141
            S+Y ++ K C        +  E  + +  GEG F    ++          GL +S+I S
Sbjct: 76  VSYYTLISKYCHR--HHQTSSSETLNLNHNGEGFFSSTQRIS-----TNGDGLNESMIKS 135

Query: 142 ITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGCVDTWLRTHTTCPLCR 201
           ITV KYK G+G ++G++CSVCLSEF+E E LRLLPKC+HAFH+ C+DTWL++H+ CPLCR
Sbjct: 136 ITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCR 195

Query: 202 AHILTDFATSNTVRPSNLSPVVQNEANS 224
           A + T           N+S VV N++NS
Sbjct: 196 AFV-TGVNNPTASVGQNVSVVVANQSNS 211

[Close]

BLAST of Lag0004899 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 3.3e-29
Identity = 89/257 (34.63%), Postives = 121/257 (47.08%), Query Frame = 0


Query: 22  NCSS--CPYDCPFDCYGFPDFYFSPPPPS---PPYADHQNNPLQPLTIVLIALFVGVFFA 81
           +CS   C   CP  CY        PPPPS       D  ++   PL I LI +    F  
Sbjct: 19  DCSQGVCSVYCPQWCY-----VIFPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFIL 78

Query: 82  FSFYIVVVK-------------------------CRACCSGSRNRGEEPSQSDGGEGEFL 141
            S+Y ++ K                          +   + + N    P+Q+ GG G   
Sbjct: 79  VSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGG--- 138

Query: 142 HENQVDHPIWFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPK 201
                          GL +S+I SITV KY+K +G +E ++CSVCLSEFQE E LRLLPK
Sbjct: 139 -------------GDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPK 198

Query: 202 CSHAFHIGCVDTWLRTHTTCPLCRAHILTDFATSNTVRPSNLSPVVQNEA-----NSGVT 244
           C+HAFH+ C+DTWL++H+ CPLCRA I+T  A    V  +N   V +N +     +S V 
Sbjct: 199 CNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAV-EIVDLTNQQIVTENNSISTGDDSVVV 253

The following BLAST results are available for this feature:

BLAST of Lag0004899 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884462.1	8.2e-123	74.59	RING-H2 finger protein ATL54-like [Benincasa hispida]	[more]
XP_011649673.1	1.9e-119	71.38	RING-H2 finger protein ATL54 [Cucumis sativus] >KGN62717.1 hypothetical protein ...	[more]
XP_008444871.1	5.2e-117	71.25	PREDICTED: RING-H2 finger protein ATL54-like [Cucumis melo] >KAA0065127.1 RING-H...	[more]
XP_023546737.1	8.5e-112	71.00	RING-H2 finger protein ATL54-like [Cucurbita pepo subsp. pepo]	[more]
KAG6598705.1	1.4e-109	69.54	RING-H2 finger protein ATL54, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lag0004899 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFY8	1.3e-41	39.30	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2	[more]
Q9LX93	7.9e-36	46.78	E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 ...	[more]
Q7XLY8	2.0e-31	40.84	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q9LF64	1.7e-30	39.42	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9SRQ8	4.7e-28	34.63	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]

BLAST of Lag0004899 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPJ4	9.2e-120	71.38	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G369190 PE...	[more]
A0A5A7VDK2	2.5e-117	71.25	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A1S3BAW8	2.5e-117	71.25	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103488086 PE=3 ...	[more]
A0A6J1HEB6	6.6e-110	69.87	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111462708...	[more]
A0A6J1K4G1	1.9e-109	71.00	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111492196 P...	[more]

BLAST of Lag0004899 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72220.1	9.0e-43	39.30	RING/U-box superfamily protein	[more]
AT5G10380.1	5.6e-37	46.78	RING/U-box superfamily protein	[more]
AT4G33565.1	1.3e-33	36.40	RING/U-box superfamily protein	[more]
AT5G17600.1	1.2e-31	39.42	RING/U-box superfamily protein	[more]
AT3G03550.1	3.3e-29	34.63	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 153..194 e-value: 1.3E-6 score: 38.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 152..195 e-value: 1.7E-13 score: 50.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 153..195 score: 12.813844
None	No IPR available	SMART	SM01197	FANCL_C_2	coord: 149..203 e-value: 0.0097 score: -1.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 276..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..319
None	No IPR available	PANTHER	PTHR45676:SF121	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 8..306
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 152..195 e-value: 1.97709E-18 score: 75.4161
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 146..202
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 127..202 e-value: 1.3E-21 score: 77.6
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 8..306

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0004899.1	Lag0004899.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane