Lag0004828 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0004828
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr6: 7532618 .. 7534642 (-)
RNA-Seq ExpressionLag0004828
SyntenyLag0004828
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACTCTGGTAGATGGTTTTCTTTCGTCAAACAATGCTCCTTCTGGCCTTCCATCGTCTTCCAACTTAAACTTCGACCTCCATCCCAGTTTTAGATTTTCTCGGATTTCCATGAATGTAGCTTGTAGAATGCATTTCTCTGCGGTATCGGCCCGTAATAGACCCCAGTGTCAATTGGCTCCAATTGCTAAAAGTACGGGTCGTAATGATGTAGGTTTTAACATCCCAATTGCTCGTAGTTTAGCTTTGTTTAATCGTAATGTCCAGGTTGTTAAATTAAGTGCTCATCGAGTTGATAGTCTGTTTGGAAACAATCTGGCAAAGCTCTATGTGAAGTGCGTGGATAGCGACTGTAAGCTGTTCGATGAAATTCCTGAGAGAACACTGTCAGCTTACGCAGCTTTGATTAGGGCGTATTGTCGGTCAGAGAAGTGGAATGAGCTCTTTGCGGCATTCAGATCGATGGTTGATGAGGGCATACTGCCTGATAAATACCTCGTGCCCACGATTCTTAAAGCATGTTCCAGGAGACAAGTGGTGAAGACAGGTAAAATGATTCATGGGTATGTCATTAGAAAGAGGTTGGTCTCTGATATTTTCGTTGGGAATGCTCTTATGGACTTCTATGGTAATTGTGGGGATTTGACATTTTCGATCAATGTTTTTGATTCGATGAGTGAAAAAGACGTGGTTTCGTGGACTGCGCTTGTTTCAGCTTACATTGAAGAAGGTCTTTTGGATGAGGCGATGGAAGCATTTCACTCCATGCAGGCAAGTGGGTTGAAGCCTGATTTGATATCTTGGAATGCACTAGTCTCAGGGTTTGCTCGATATGGAGAGATTGACACTGCTCTCGAATACTTGGAAGCCATGCAAGAAAACGGGTTGAGCCCAAGGGTTAATTCATGGAATGCAATCATATCAGGCTGTGTTCAAAATGGGTATTTTAAAGATGCTTTGGATGTATTCATTAATATGCTGTTGTTTCCTGAGAATCCAAATTCTGTAACTGTTGCGAGTATACTACCAGCCTGTGCAGGGTTGAGAGATTTAAGCTTAGGCAGGGCTATTCATGCATATGCTCTTAAGCGCGAGCTATGTACAAATATTTACGTTGAAGGATCATTAGTTGATATGTATTCGAAATGTGGACAAGATGATTATGCTGAAGAAGTTTTTGCCAAAGCGGAGAAGAAAAACATTACATTGTGGAACGAAATTATTGCAACTTACTTGAATCAGGGAAAAATTGACCAGGCCTTGGAACGTTTTAGATCAATGCAGCATCATGGACTAAAACCTGATGTTGTAACCTACAACACACTGCTAGCTGGACATGCAAAAAATGGGCAGAAAGTTGAAGCATATAAGTTGCTATCTGAGATGTTACAGAATGATTTGGCACCCAATGTTGTATCTTTAAATGTTTTAGTTTCTGGATTTCAACAATCTGGGTTAAGTTATGAAGCTCTAAAATTATTCCAGACCAAACTATGCACTGGTTGCCTTCTTAATAAGGTGATTACCCTGCCGATTAGACCAAATACTGTCACTATAACTTCTGCTCTGGCTGCTTGTGCTAGCTTGAATTTATTGTGCAAAGGGAAGGAAATCCATGGATATATGTTGAGGAATGCTTTTGAAGACAACCATTTCGTTTCAAGTGCTCTCATTGACATGTACATAAAGTGTGGCAATATTGGTTCGGCAATTCAAGTATTTAGGAGAATAAAGAACAGGAATGTAGTTTGTTGGAATGCCTTGATTGCAGGTCTTATGAAAATTATGCAGCCCAAAGTGGCAATTGATTTCTTCTGTCAAATGCTAGTAGAAGGCACAAAGCCAAGTTCAGTCACCTTTTCGATACTTCTCCCCGCCTTAGCTGACAGGGCAGATTTGGAAGCGAGAAGACAGCTACATTCCTATATCATCAAGAGTCAGCTCCTCGAATCATGCAATGACCTTGCAAATGTCTTGAGTTCAGATAATTTTGATGGAGAAATTCGGCTTCATGGAATATAA

mRNA sequence

ATGGCAACTCTGGTAGATGGTTTTCTTTCGTCAAACAATGCTCCTTCTGGCCTTCCATCGTCTTCCAACTTAAACTTCGACCTCCATCCCAGTTTTAGATTTTCTCGGATTTCCATGAATGTAGCTTGTAGAATGCATTTCTCTGCGGTATCGGCCCGTAATAGACCCCAGTGTCAATTGGCTCCAATTGCTAAAAGTACGGGTCGTAATGATGTAGGTTTTAACATCCCAATTGCTCGTAGTTTAGCTTTGTTTAATCGTAATGTCCAGGTTGTTAAATTAAGTGCTCATCGAGTTGATAGTCTGTTTGGAAACAATCTGGCAAAGCTCTATGTGAAGTGCGTGGATAGCGACTGTAAGCTGTTCGATGAAATTCCTGAGAGAACACTGTCAGCTTACGCAGCTTTGATTAGGGCGTATTGTCGGTCAGAGAAGTGGAATGAGCTCTTTGCGGCATTCAGATCGATGGTTGATGAGGGCATACTGCCTGATAAATACCTCGTGCCCACGATTCTTAAAGCATGTTCCAGGAGACAAGTGGTGAAGACAGGTAAAATGATTCATGGGTATGTCATTAGAAAGAGGTTGGTCTCTGATATTTTCGTTGGGAATGCTCTTATGGACTTCTATGGTAATTGTGGGGATTTGACATTTTCGATCAATGTTTTTGATTCGATGAGTGAAAAAGACGTGGTTTCGTGGACTGCGCTTGTTTCAGCTTACATTGAAGAAGGTCTTTTGGATGAGGCGATGGAAGCATTTCACTCCATGCAGGCAAGTGGGTTGAAGCCTGATTTGATATCTTGGAATGCACTAGTCTCAGGGTTTGCTCGATATGGAGAGATTGACACTGCTCTCGAATACTTGGAAGCCATGCAAGAAAACGGGTTGAGCCCAAGGGTTAATTCATGGAATGCAATCATATCAGGCTGTGTTCAAAATGGGTATTTTAAAGATGCTTTGGATGTATTCATTAATATGCTGTTGTTTCCTGAGAATCCAAATTCTGTAACTGTTGCGAGTATACTACCAGCCTGTGCAGGGTTGAGAGATTTAAGCTTAGGCAGGGCTATTCATGCATATGCTCTTAAGCGCGAGCTATGTACAAATATTTACGTTGAAGGATCATTAGTTGATATGTATTCGAAATGTGGACAAGATGATTATGCTGAAGAAGTTTTTGCCAAAGCGGAGAAGAAAAACATTACATTGTGGAACGAAATTATTGCAACTTACTTGAATCAGGGAAAAATTGACCAGGCCTTGGAACGTTTTAGATCAATGCAGCATCATGGACTAAAACCTGATGTTGTAACCTACAACACACTGCTAGCTGGACATGCAAAAAATGGGCAGAAAGTTGAAGCATATAAGTTGCTATCTGAGATGTTACAGAATGATTTGGCACCCAATGTTGTATCTTTAAATGTTTTAGTTTCTGGATTTCAACAATCTGGGTTAAGTTATGAAGCTCTAAAATTATTCCAGACCAAACTATGCACTGGTTGCCTTCTTAATAAGGTGATTACCCTGCCGATTAGACCAAATACTGTCACTATAACTTCTGCTCTGGCTGCTTGTGCTAGCTTGAATTTATTGTGCAAAGGGAAGGAAATCCATGGATATATGTTGAGGAATGCTTTTGAAGACAACCATTTCGTTTCAAGTGCTCTCATTGACATGTACATAAAGTGTGGCAATATTGGTTCGGCAATTCAAGTATTTAGGAGAATAAAGAACAGGAATGTAGTTTGTTGGAATGCCTTGATTGCAGGTCTTATGAAAATTATGCAGCCCAAAGTGGCAATTGATTTCTTCTGTCAAATGCTAGTAGAAGGCACAAAGCCAAGTTCAGTCACCTTTTCGATACTTCTCCCCGCCTTAGCTGACAGGGCAGATTTGGAAGCGAGAAGACAGCTACATTCCTATATCATCAAGAGTCAGCTCCTCGAATCATGCAATGACCTTGCAAATGTCTTGAGTTCAGATAATTTTGATGGAGAAATTCGGCTTCATGGAATATAA

Coding sequence (CDS)

ATGGCAACTCTGGTAGATGGTTTTCTTTCGTCAAACAATGCTCCTTCTGGCCTTCCATCGTCTTCCAACTTAAACTTCGACCTCCATCCCAGTTTTAGATTTTCTCGGATTTCCATGAATGTAGCTTGTAGAATGCATTTCTCTGCGGTATCGGCCCGTAATAGACCCCAGTGTCAATTGGCTCCAATTGCTAAAAGTACGGGTCGTAATGATGTAGGTTTTAACATCCCAATTGCTCGTAGTTTAGCTTTGTTTAATCGTAATGTCCAGGTTGTTAAATTAAGTGCTCATCGAGTTGATAGTCTGTTTGGAAACAATCTGGCAAAGCTCTATGTGAAGTGCGTGGATAGCGACTGTAAGCTGTTCGATGAAATTCCTGAGAGAACACTGTCAGCTTACGCAGCTTTGATTAGGGCGTATTGTCGGTCAGAGAAGTGGAATGAGCTCTTTGCGGCATTCAGATCGATGGTTGATGAGGGCATACTGCCTGATAAATACCTCGTGCCCACGATTCTTAAAGCATGTTCCAGGAGACAAGTGGTGAAGACAGGTAAAATGATTCATGGGTATGTCATTAGAAAGAGGTTGGTCTCTGATATTTTCGTTGGGAATGCTCTTATGGACTTCTATGGTAATTGTGGGGATTTGACATTTTCGATCAATGTTTTTGATTCGATGAGTGAAAAAGACGTGGTTTCGTGGACTGCGCTTGTTTCAGCTTACATTGAAGAAGGTCTTTTGGATGAGGCGATGGAAGCATTTCACTCCATGCAGGCAAGTGGGTTGAAGCCTGATTTGATATCTTGGAATGCACTAGTCTCAGGGTTTGCTCGATATGGAGAGATTGACACTGCTCTCGAATACTTGGAAGCCATGCAAGAAAACGGGTTGAGCCCAAGGGTTAATTCATGGAATGCAATCATATCAGGCTGTGTTCAAAATGGGTATTTTAAAGATGCTTTGGATGTATTCATTAATATGCTGTTGTTTCCTGAGAATCCAAATTCTGTAACTGTTGCGAGTATACTACCAGCCTGTGCAGGGTTGAGAGATTTAAGCTTAGGCAGGGCTATTCATGCATATGCTCTTAAGCGCGAGCTATGTACAAATATTTACGTTGAAGGATCATTAGTTGATATGTATTCGAAATGTGGACAAGATGATTATGCTGAAGAAGTTTTTGCCAAAGCGGAGAAGAAAAACATTACATTGTGGAACGAAATTATTGCAACTTACTTGAATCAGGGAAAAATTGACCAGGCCTTGGAACGTTTTAGATCAATGCAGCATCATGGACTAAAACCTGATGTTGTAACCTACAACACACTGCTAGCTGGACATGCAAAAAATGGGCAGAAAGTTGAAGCATATAAGTTGCTATCTGAGATGTTACAGAATGATTTGGCACCCAATGTTGTATCTTTAAATGTTTTAGTTTCTGGATTTCAACAATCTGGGTTAAGTTATGAAGCTCTAAAATTATTCCAGACCAAACTATGCACTGGTTGCCTTCTTAATAAGGTGATTACCCTGCCGATTAGACCAAATACTGTCACTATAACTTCTGCTCTGGCTGCTTGTGCTAGCTTGAATTTATTGTGCAAAGGGAAGGAAATCCATGGATATATGTTGAGGAATGCTTTTGAAGACAACCATTTCGTTTCAAGTGCTCTCATTGACATGTACATAAAGTGTGGCAATATTGGTTCGGCAATTCAAGTATTTAGGAGAATAAAGAACAGGAATGTAGTTTGTTGGAATGCCTTGATTGCAGGTCTTATGAAAATTATGCAGCCCAAAGTGGCAATTGATTTCTTCTGTCAAATGCTAGTAGAAGGCACAAAGCCAAGTTCAGTCACCTTTTCGATACTTCTCCCCGCCTTAGCTGACAGGGCAGATTTGGAAGCGAGAAGACAGCTACATTCCTATATCATCAAGAGTCAGCTCCTCGAATCATGCAATGACCTTGCAAATGTCTTGAGTTCAGATAATTTTGATGGAGAAATTCGGCTTCATGGAATATAA

Protein sequence

MATLVDGFLSSNNAPSGLPSSSNLNFDLHPSFRFSRISMNVACRMHFSAVSARNRPQCQLAPIAKSTGRNDVGFNIPIARSLALFNRNVQVVKLSAHRVDSLFGNNLAKLYVKCVDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSRRQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSINVFDSMSEKDVVSWTALVSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLEAMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYLNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLPIRPNTVTITSALAACASLNLLCKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALIAGLMKIMQPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESCNDLANVLSSDNFDGEIRLHGI
Homology
BLAST of Lag0004828 vs. NCBI nr
Match: XP_038884429.1 (pentatricopeptide repeat-containing protein At1g19720-like [Benincasa hispida])

HSP 1 Score: 1135.9 bits (2937), Expect = 0.0e+00
Identity = 571/675 (84.59%), Postives = 606/675 (89.78%), Query Frame = 0

Query: 3   TLVDGFLSSNNAPSGLPSSSNLNFDLHPSFRFSRISMNVACRMHFSAVSARNRPQCQLAP 62
           T +DGF+SS+NA   LPSS   NFDL PSFR SR SM VACRMHF+A+SA +RPQ Q +P
Sbjct: 6   TYIDGFVSSSNASPALPSSFKFNFDLQPSFRLSRNSMYVACRMHFTAISAHDRPQGQFSP 65

Query: 63  IAKSTGRNDVGFNIPIARSLALFNRNVQVVKLSAHRVDSLFGNNLAKLYVK---CVDSDC 122
           IAK T RN  GF +PIARS  LFN N QVVKL+A RVD+LFG  LA  Y K   CVDSD 
Sbjct: 66  IAKCTDRNYGGFKVPIARSFGLFNHNAQVVKLNACRVDNLFGKKLATFYAKDVNCVDSDS 125

Query: 123 KLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSRRQ 182
           KLFDEIPERTLSAY+ALIRAYCRSEKWNELFAAFRSMVDEGILP KYLVPTILKACSRRQ
Sbjct: 126 KLFDEIPERTLSAYSALIRAYCRSEKWNELFAAFRSMVDEGILPGKYLVPTILKACSRRQ 185

Query: 183 VVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSINVFDSMSEKDVVSWTALVS 242
           +VKTGKM+HGY IRKRLVSDIF+GNAL+D YGNCGDL FSINVFDSMSEKDVVSWTALVS
Sbjct: 186 MVKTGKMVHGYAIRKRLVSDIFIGNALIDLYGNCGDLRFSINVFDSMSEKDVVSWTALVS 245

Query: 243 AYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLEAMQENGLSP 302
           AYIEEGLLDE ME FHSMQ+SGLKPDLISWNALVSGFARYGE +TAL YLEAMQE GLSP
Sbjct: 246 AYIEEGLLDEVMEVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEGLSP 305

Query: 303 RVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGRAIH 362
           RVNSWN +ISG VQNGYFKDALDVFINMLLF ENPNSVTVASILPACAGLRDL LGRAIH
Sbjct: 306 RVNSWNGVISGFVQNGYFKDALDVFINMLLFAENPNSVTVASILPACAGLRDLGLGRAIH 365

Query: 363 AYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYLNQGKID 422
           AYALK ELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATY+NQ K  
Sbjct: 366 AYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYVNQEKTS 425

Query: 423 QALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLNVLV 482
           QALE FRS+QHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQ DLAPNVVSLNVLV
Sbjct: 426 QALECFRSLQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQKDLAPNVVSLNVLV 485

Query: 483 SGFQQSGLSYEALKLFQTKLCTGCLLNKVITLPIRPNTVTITSALAACASLNLLCKGKEI 542
           SGFQQSGLSYEAL+LFQT LC GCL NK+IT PIRP+TVTIT+AL ACASLNLL KGKEI
Sbjct: 486 SGFQQSGLSYEALELFQTMLCKGCLHNKMITFPIRPDTVTITAALVACASLNLLHKGKEI 545

Query: 543 HGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALIAGLMKIMQP 602
           HGYM RN+FEDNHF+SSALIDMY KC NI  AIQVFR IKNRNVVCWNALIAGLM+IMQP
Sbjct: 546 HGYMFRNSFEDNHFISSALIDMYAKCENIDLAIQVFRSIKNRNVVCWNALIAGLMRIMQP 605

Query: 603 KVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESCNDLANV 662
           K+A++ FCQMLVEG KPSSVTFSILLPALA++ADL+ARRQLHSYIIKS+ LESCNDLANV
Sbjct: 606 KMAVELFCQMLVEGLKPSSVTFSILLPALAEKADLKARRQLHSYIIKSRYLESCNDLANV 665

Query: 663 LSSDNFDGEIRLHGI 675
           LSSDNFDG + LHGI
Sbjct: 666 LSSDNFDGGVLLHGI 680

BLAST of Lag0004828 vs. NCBI nr
Match: KAG6598662.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1099.3 bits (2842), Expect = 0.0e+00
Identity = 557/677 (82.27%), Postives = 602/677 (88.92%), Query Frame = 0

Query: 1   MATLVDGFLSSNN-APSGLPSSSNLNFDLHPSFRFSRISMNVACRMHFSAVSARNRPQCQ 60
           MATLVDGFLSSNN +P+ LPSSS LN DL+PSFRFSR SMNVACRMH +A+SA NRPQC+
Sbjct: 1   MATLVDGFLSSNNTSPALLPSSSKLNVDLYPSFRFSRNSMNVACRMHSTAISAHNRPQCR 60

Query: 61  LAPIAKSTGRNDVGFNIPIARSLALFNRNVQVVKLSAHRVDSLFGNNLAKLYVK---CVD 120
            AP+AK    ND G N+PIARS ALFNRNVQ VKL+A RVDSL GNNLAK   K   CVD
Sbjct: 61  FAPVAKCPDSNDAGSNVPIARSFALFNRNVQDVKLNARRVDSLIGNNLAKFCTKCATCVD 120

Query: 121 SDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACS 180
           SD K+FDE+PER L AY ALIRAYCRSEKWNELFAAF SMV+EGILPDKYLVPTILKACS
Sbjct: 121 SDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGSMVEEGILPDKYLVPTILKACS 180

Query: 181 RRQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSINVFDSMSEKDVVSWTA 240
            RQ VKTGKM+HGY IRKRLVSDIF+GNALMDFYGNCGDL FSINVFDSMSEKDVVSWTA
Sbjct: 181 IRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTA 240

Query: 241 LVSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLEAMQENG 300
           LVSAY+EEGLLDEAMEAFHSMQ+SGLKPDLISWNALVSGFAR+G+I TAL+YLEAMQE G
Sbjct: 241 LVSAYMEEGLLDEAMEAFHSMQSSGLKPDLISWNALVSGFARHGKIGTALKYLEAMQEQG 300

Query: 301 LSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGR 360
           LSPRVNSWN +ISGCV NG+FKDAL VFINMLLFPENPNSVTVAS+LPACAGLR L LGR
Sbjct: 301 LSPRVNSWNGVISGCVLNGFFKDALYVFINMLLFPENPNSVTVASVLPACAGLRYLGLGR 360

Query: 361 AIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYLNQG 420
           A+HAYALK ELCTNIYVEGSLV+MYSKCGQDDYAEE+FAKAEKKNITLWNEIIATY+NQG
Sbjct: 361 AVHAYALKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFAKAEKKNITLWNEIIATYVNQG 420

Query: 421 KIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLN 480
           +  QALERFRSMQHHGL+PDVVTYNTLLAG+AKNGQKVEAY LL+EMLQ DLAPNVVSLN
Sbjct: 421 RTSQALERFRSMQHHGLRPDVVTYNTLLAGYAKNGQKVEAYNLLTEMLQKDLAPNVVSLN 480

Query: 481 VLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLPIRPNTVTITSALAACASLNLLCKG 540
           VLVSGFQQSGLSYEAL+LFQT L T CL++KVIT PIRPN VTIT+ LAACASLNLL KG
Sbjct: 481 VLVSGFQQSGLSYEALELFQTMLYTACLVDKVITSPIRPNIVTITAVLAACASLNLLHKG 540

Query: 541 KEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALIAGLMKI 600
           KEIHGYMLRN FED+H VSSALIDMY KC  I S I+VF  IKNRN VCWNALIAG  ++
Sbjct: 541 KEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVFGGIKNRNEVCWNALIAGFRRV 600

Query: 601 MQPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESCNDL 660
           MQPK+A++ FCQMLVEG KPSS TFSIL PALA R DL  RRQLHSYIIKSQL+ESC+DL
Sbjct: 601 MQPKMAVELFCQMLVEGIKPSSDTFSILFPALA-RTDLIMRRQLHSYIIKSQLVESCDDL 660

Query: 661 ANVLSSDNFDGEIRLHG 674
           ANVLSS+ FDG + LHG
Sbjct: 661 ANVLSSNEFDGGVLLHG 676

BLAST of Lag0004828 vs. NCBI nr
Match: KAG7029606.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1095.1 bits (2831), Expect = 0.0e+00
Identity = 555/677 (81.98%), Postives = 600/677 (88.63%), Query Frame = 0

Query: 1   MATLVDGFLSSNN-APSGLPSSSNLNFDLHPSFRFSRISMNVACRMHFSAVSARNRPQCQ 60
           MATLVDGFLSSNN +P+ LPSSS LN DL+PSFRFSR SMNVACRMH +A+SA NRPQC+
Sbjct: 1   MATLVDGFLSSNNTSPALLPSSSKLNVDLYPSFRFSRNSMNVACRMHSTAISAHNRPQCR 60

Query: 61  LAPIAKSTGRNDVGFNIPIARSLALFNRNVQVVKLSAHRVDSLFGNNLAKLYVK---CVD 120
            AP+AK    ND G N+PIARS ALFNRNVQ VKL+A RVDSL GNNLAK   K   CVD
Sbjct: 61  FAPVAKCPDSNDAGSNVPIARSFALFNRNVQDVKLNARRVDSLIGNNLAKFCTKCATCVD 120

Query: 121 SDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACS 180
           SD K+FDE+PER L AY ALIRAYCRSEKWNELFAAF SMV+EGILPDKYLVPTILKACS
Sbjct: 121 SDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGSMVEEGILPDKYLVPTILKACS 180

Query: 181 RRQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSINVFDSMSEKDVVSWTA 240
            RQ VKTGKM+HGY IRKRLVSDIF+GNALMDFYGNCGDL FSINVFDSMSEKDVVSWTA
Sbjct: 181 IRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTA 240

Query: 241 LVSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLEAMQENG 300
           LVSAY+EEGLLDEAMEAFHSMQ+SGLKPDLISWNALVSGFAR+G+I TAL+YLEAMQE G
Sbjct: 241 LVSAYMEEGLLDEAMEAFHSMQSSGLKPDLISWNALVSGFARHGKIGTALKYLEAMQEQG 300

Query: 301 LSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGR 360
           LSPRVNSWN +ISGCV NG+FKDAL VFINMLLFPENPNSVTVAS+LPACAGLR L LGR
Sbjct: 301 LSPRVNSWNGVISGCVLNGFFKDALYVFINMLLFPENPNSVTVASVLPACAGLRYLGLGR 360

Query: 361 AIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYLNQG 420
           A+HAY LK ELCTNIYVEGSLV+MYSKCGQDDYAEE+FAKAEKKNITLWNEIIATY+NQG
Sbjct: 361 AVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFAKAEKKNITLWNEIIATYVNQG 420

Query: 421 KIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLN 480
           +  QALERFRSMQHHGL+PDVVTYNTLLAG+AKNGQKVEAY LL+EMLQ DLAPNVVSLN
Sbjct: 421 RTSQALERFRSMQHHGLRPDVVTYNTLLAGYAKNGQKVEAYNLLTEMLQKDLAPNVVSLN 480

Query: 481 VLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLPIRPNTVTITSALAACASLNLLCKG 540
           VLVSGFQQSGLSYEAL+LFQT L T CL++KVIT PIRPN VTIT+ LAACASLNLL KG
Sbjct: 481 VLVSGFQQSGLSYEALELFQTMLYTACLVDKVITSPIRPNIVTITAVLAACASLNLLHKG 540

Query: 541 KEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALIAGLMKI 600
           KEIHGYMLRN FED+H VSSALIDMY KC  I S I+VF  IKNRN VCWNALIAG  ++
Sbjct: 541 KEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVFGGIKNRNEVCWNALIAGFRRV 600

Query: 601 MQPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESCNDL 660
           MQPK+A++ FCQMLVEG KPSS TFSIL PALA R DL  RRQLHSYIIKSQL+ SC+DL
Sbjct: 601 MQPKMAVELFCQMLVEGIKPSSDTFSILFPALA-RTDLIMRRQLHSYIIKSQLVGSCDDL 660

Query: 661 ANVLSSDNFDGEIRLHG 674
           ANVLSS+ FDG + LHG
Sbjct: 661 ANVLSSNEFDGGVLLHG 676

BLAST of Lag0004828 vs. NCBI nr
Match: XP_004146805.1 (pentatricopeptide repeat-containing protein At1g19720 [Cucumis sativus] >KGN47749.1 hypothetical protein Csa_003552 [Cucumis sativus])

HSP 1 Score: 1085.9 bits (2807), Expect = 0.0e+00
Identity = 549/677 (81.09%), Postives = 594/677 (87.74%), Query Frame = 0

Query: 1   MATLVDGFLSSNNAPSGLPSSSNLNFDLHPSFRFSRISMNVACRMHFSAVSARNRPQCQL 60
           MAT V GF SSNNA   LPS    +FDL+P+  FSR SMNVACRMHF AVSA NRP CQ 
Sbjct: 1   MATPVYGFASSNNASLRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFHAVSAHNRPNCQF 60

Query: 61  APIAKSTGRNDVGFNIPIARSLALFNRNVQVVKLSAHRVDSLFGNNLAKLY---VKCVDS 120
           +PIA  T RN  G N+PI RS ALF+ + QVVKL+  RVD+LFG  L K Y   VKCVDS
Sbjct: 61  SPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCRVDNLFGKKLTKFYVKDVKCVDS 120

Query: 121 DCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR 180
           D K+FDEIPERTL AYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR
Sbjct: 121 DSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR 180

Query: 181 RQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSINVFDSMSEKDVVSWTAL 240
           RQ+VKTGKM HGY IRKR+VSDI + NALMDFYGNCGDL+ SINVFDSMSEKDVVSWTAL
Sbjct: 181 RQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTAL 240

Query: 241 VSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLEAMQENGL 300
           VSAYIEEGLL+EAME FHSMQ+SGLKPDLISWNALVSGFARYGE +TAL YLEAMQE GL
Sbjct: 241 VSAYIEEGLLNEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEGL 300

Query: 301 SPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGRA 360
            PRVNSWN +ISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDL LGRA
Sbjct: 301 RPRVNSWNGVISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRA 360

Query: 361 IHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYLNQGK 420
           +HAYALK ELCTNIYVEGSLVDMYSKCGQDD AEE+FAKAEKKNITLWNEIIATY+NQGK
Sbjct: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGK 420

Query: 421 IDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLNV 480
              ALE FRSMQHHGLKPDVVTYNTLLAG+AKNGQKVEAY+LLS+MLQ +L PNV+SLNV
Sbjct: 421 NSWALEHFRSMQHHGLKPDVVTYNTLLAGYAKNGQKVEAYELLSDMLQENLVPNVISLNV 480

Query: 481 LVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLPIRPNTVTITSALAACASLNLLCKGK 540
           LVSGFQQSGL+YEAL+L QT LCTG LLNK I  P+ PNTVT+T+ALAACASLNLL KGK
Sbjct: 481 LVSGFQQSGLNYEALELCQTMLCTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKGK 540

Query: 541 EIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALIAGLMKIM 600
           EIHGYMLRN F +N+F+SSALI+MY KCG+I SAIQVF RIKNRNVVCWNALIAGL++ M
Sbjct: 541 EIHGYMLRNYFVNNYFISSALINMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTM 600

Query: 601 QPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESCNDLA 660
           Q K+A++ FCQMLVEG KPSS TFSILLPAL++RADL+ RRQLHSYIIKSQ LES NDLA
Sbjct: 601 QHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660

Query: 661 NVLSSDNFDGEIRLHGI 675
           NVLSSDN D  + LHGI
Sbjct: 661 NVLSSDNVDVGVLLHGI 677

BLAST of Lag0004828 vs. NCBI nr
Match: KAA0064811.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1083.9 bits (2802), Expect = 0.0e+00
Identity = 547/677 (80.80%), Postives = 597/677 (88.18%), Query Frame = 0

Query: 1   MATLVDGFLSSNNAPSGLPSSSNLNFDLHPSFRFSRISMNVACRMHFSAVSARNRPQCQL 60
           MAT +DGF+SSNNA   LPS    +FDL+P+  FSR SMNVACRMHF+AV ARNRP CQ 
Sbjct: 1   MATPLDGFVSSNNASPRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFNAVWARNRPNCQF 60

Query: 61  APIAKSTGRNDVGFNIPIARSLALFNRNVQVVKLSAHRVDSLFGNNLAKLY---VKCVDS 120
           +PIA  T  +  G N+PI  S  LFN N QVVKL+A RVD+LFG  L K Y   VKCVD 
Sbjct: 61  SPIAIRT--DCEGVNVPIPGSFVLFNHNSQVVKLNACRVDNLFGKKLTKFYVKDVKCVDG 120

Query: 121 DCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR 180
           D K+FDEIPER L  YAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPT+LKACSR
Sbjct: 121 DSKVFDEIPERALPTYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTVLKACSR 180

Query: 181 RQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSINVFDSMSEKDVVSWTAL 240
           RQ+VKTGKM+HGY IRKR+VSDI +GNALMDFYGNC DL  SINVFDSMSEKDVVSWTAL
Sbjct: 181 RQMVKTGKMVHGYAIRKRMVSDIVIGNALMDFYGNCRDLGSSINVFDSMSEKDVVSWTAL 240

Query: 241 VSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLEAMQENGL 300
           VSAYIEEGLL+EAM+ FHSMQ+SGLKPDLISWNALVSGFARYGE +TAL YLEAMQE GL
Sbjct: 241 VSAYIEEGLLNEAMKVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEGL 300

Query: 301 SPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGRA 360
            PRVNSWN +ISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLR+L LGRA
Sbjct: 301 RPRVNSWNGVISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRNLGLGRA 360

Query: 361 IHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYLNQGK 420
           +HAYALK ELCTNIYVEGSLVDMYSKCGQDD+AEEVFAKAEKKN+TLWNEIIATY+NQGK
Sbjct: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDHAEEVFAKAEKKNVTLWNEIIATYVNQGK 420

Query: 421 IDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLNV 480
             QALERFRSMQHHGLKPDVVTYNTLLAG+AKNG+KVEAY+LLS+ML+ +L PNV+SLNV
Sbjct: 421 NSQALERFRSMQHHGLKPDVVTYNTLLAGYAKNGKKVEAYELLSDMLRENLVPNVISLNV 480

Query: 481 LVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLPIRPNTVTITSALAACASLNLLCKGK 540
           LVSGFQ SGLSYEAL+L QT LCTG LLNKVI  P+ P+TVTIT+ALAACASLNLL KGK
Sbjct: 481 LVSGFQNSGLSYEALELCQTMLCTGSLLNKVIAFPVIPDTVTITAALAACASLNLLHKGK 540

Query: 541 EIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALIAGLMKIM 600
           EIHGYMLRN FE+NHF+SSALI+MY KC NI SAIQVF RIKNRNVVCWNALIAGL++IM
Sbjct: 541 EIHGYMLRNYFENNHFISSALINMYAKCENIDSAIQVFSRIKNRNVVCWNALIAGLLRIM 600

Query: 601 QPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESCNDLA 660
           Q +VA++ FCQMLVEG KPSS TFSILLPAL++RADL+ RRQLHSYIIKSQ LES NDLA
Sbjct: 601 QHEVAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660

Query: 661 NVLSSDNFDGEIRLHGI 675
           NVLSSDNFD  + LHGI
Sbjct: 661 NVLSSDNFDVGVLLHGI 675

BLAST of Lag0004828 vs. ExPASy Swiss-Prot
Match: Q9FXH1 (Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX=3702 GN=DYW7 PE=2 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.2e-95
Identity = 186/531 (35.03%), Postives = 304/531 (57.25%), Query Frame = 0

Query: 100 DSLFGNNLAKLYVK--CVDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMV 159
           D      L  +Y K  C+    K+FD + ER L  ++A+I AY R  +W E+   FR M+
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173

Query: 160 DEGILPDKYLVPTILKACSRRQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLT 219
            +G+LPD +L P IL+ C+    V+ GK+IH  VI+  + S + V N+++  Y  CG+L 
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233

Query: 220 FSINVFDSMSEKDVVSWTALVSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFA 279
           F+   F  M E+DV++W +++ AY + G  +EA+E    M+  G+ P L++WN L+ G+ 
Sbjct: 234 FATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293

Query: 280 RYGEIDTALEYLEAMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSV 339
           + G+ D A++ ++ M+  G++  V +W A+ISG + NG    ALD+F  M L    PN+V
Sbjct: 294 QLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353

Query: 340 TVASILPACAGLRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKA 399
           T+ S + AC+ L+ ++ G  +H+ A+K     ++ V  SLVDMYSKCG+ + A +VF   
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413

Query: 400 EKKNITLWNEIIATYLNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAY 459
           + K++  WN +I  Y   G   +A E F  MQ   L+P+++T+NT+++G+ KNG + EA 
Sbjct: 414 KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAM 473

Query: 460 KLLSEMLQN-DLAPNVVSLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLPIRPN 519
            L   M ++  +  N  + N++++G+ Q+G   EAL+LF+          K+      PN
Sbjct: 474 DLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFR----------KMQFSRFMPN 533

Query: 520 TVTITSALAACASLNLLCKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFR 579
           +VTI S L ACA+L      +EIHG +LR   +  H V +AL D Y K G+I  +  +F 
Sbjct: 534 SVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFL 593

Query: 580 RIKNRNVVCWNALIAGLMKIMQPKVAIDFFCQMLVEGTKPSSVTFSILLPA 628
            ++ ++++ WN+LI G +       A+  F QM  +G  P+  T S ++ A
Sbjct: 594 GMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634

BLAST of Lag0004828 vs. ExPASy Swiss-Prot
Match: Q9SV26 (Pentatricopeptide repeat-containing protein At4g01030, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H65 PE=3 SV=2)

HSP 1 Score: 286.6 bits (732), Expect = 7.4e-76
Identity = 168/517 (32.50%), Postives = 272/517 (52.61%), Query Frame = 0

Query: 111 YVKCVDSDC--KLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLV 170
           Y +CV      KLFDE+P+R   A+  ++    RS  W +    FR M   G       +
Sbjct: 33  YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTM 92

Query: 171 PTILKACSRRQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSINVFDSMSE 230
             +L+ CS ++    G+ IHGYV+R  L S++ + N+L+  Y   G L  S  VF+SM +
Sbjct: 93  VKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD 152

Query: 231 KDVVSWTALVSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYGEIDTALEY 290
           +++ SW +++S+Y + G +D+A+     M+  GLKPD+++WN+L+SG+A  G    A+  
Sbjct: 153 RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAV 212

Query: 291 LEAMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAG 350
           L+ MQ  GL P  +S                                   ++S+L A A 
Sbjct: 213 LKRMQIAGLKPSTSS-----------------------------------ISSLLQAVAE 272

Query: 351 LRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEI 410
              L LG+AIH Y L+ +L  ++YVE +L+DMY K G   YA  VF   + KNI  WN +
Sbjct: 273 PGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSL 332

Query: 411 IATYLNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDL 470
           ++       +  A      M+  G+KPD +T+N+L +G+A  G+  +A  ++ +M +  +
Sbjct: 333 VSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGV 392

Query: 471 APNVVSLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLPIRPNTVTITSALAACA 530
           APNVVS   + SG  ++G    ALK+F           K+    + PN  T+++ L    
Sbjct: 393 APNVVSWTAIFSGCSKNGNFRNALKVF----------IKMQEEGVGPNAATMSTLLKILG 452

Query: 531 SLNLLCKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNA 590
            L+LL  GKE+HG+ LR     + +V++AL+DMY K G++ SAI++F  IKN+++  WN 
Sbjct: 453 CLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNC 504

Query: 591 LIAGLMKIMQPKVAIDFFCQMLVEGTKPSSVTFSILL 626
           ++ G     + +  I  F  ML  G +P ++TF+ +L
Sbjct: 513 MLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 504

BLAST of Lag0004828 vs. ExPASy Swiss-Prot
Match: Q9FM64 (Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR21 PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.4e-76
Identity = 173/581 (29.78%), Postives = 294/581 (50.60%), Query Frame = 0

Query: 107 LAKLYVKC--VDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPD 166
           L   Y KC  ++    LF ++  R + ++AA+I   CR          F  M++  I PD
Sbjct: 113 LVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPD 172

Query: 167 KYLVPTILKACSRRQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSINVFD 226
            ++VP + KAC   +  + G+ +HGYV++  L   +FV ++L D YG CG L  +  VFD
Sbjct: 173 NFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFD 232

Query: 227 SMSEKDVVSWTALVSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYG---- 286
            + +++ V+W AL+  Y++ G  +EA+  F  M+  G++P  ++ +  +S  A  G    
Sbjct: 233 EIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEE 292

Query: 287 -------------EIDTAL--------------EYLEAMQENGLSPRVNSWNAIISGCVQ 346
                        E+D  L              EY E + +      V +WN IISG VQ
Sbjct: 293 GKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQ 352

Query: 347 NGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGRAIHAYALKRELCTNIYV 406
            G  +DA+ +   M L     + VT+A+++ A A   +L LG+ +  Y ++    ++I +
Sbjct: 353 QGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVL 412

Query: 407 EGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYLNQGKIDQALERFRSMQHHGL 466
             +++DMY+KCG    A++VF    +K++ LWN ++A Y   G   +AL  F  MQ  G+
Sbjct: 413 ASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGV 472

Query: 467 KPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLNVLVSGFQQSGLSYEALK 526
            P+V+T+N ++    +NGQ  EA  +  +M  + + PN++S   +++G  Q+G S EA+ 
Sbjct: 473 PPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAI- 532

Query: 527 LFQTKLCTGCLLNKVITLPIRPNTVTITSALAACASLNLLCKGKEIHGYMLRNAFEDNHF 586
                      L K+    +RPN  +IT AL+ACA L  L  G+ IHGY++RN    +  
Sbjct: 533 ---------LFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLV 592

Query: 587 -VSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALIAGLMKIMQPKVAIDFFCQMLVE 646
            + ++L+DMY KCG+I  A +VF       +   NA+I+        K AI  +  +   
Sbjct: 593 SIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGV 652

Query: 647 GTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESC 654
           G KP ++T + +L A     D+    ++ + I+  + ++ C
Sbjct: 653 GLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPC 683

BLAST of Lag0004828 vs. ExPASy Swiss-Prot
Match: Q9SS83 (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 7.0e-66
Identity = 169/567 (29.81%), Postives = 280/567 (49.38%), Query Frame = 0

Query: 104 GNNLAKLYVKC--VDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGI 163
           GN +  LY KC  V    K FD + E+ ++A+ +++  Y    K  ++  +F S+ +  I
Sbjct: 98  GNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQI 157

Query: 164 LPDKYLVPTILKACSRRQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSIN 223
            P+K+    +L  C+R   V+ G+ IH  +I+  L  + + G AL+D Y  C  ++ +  
Sbjct: 158 FPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARR 217

Query: 224 VFDSMSEKDVVSWTALVSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYGE 283
           VF+ + + + V WT L S Y++ GL +EA+  F  M+  G +PD +++  +++ + R G+
Sbjct: 218 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK 277

Query: 284 IDTALEYLEAMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVAS 343
           +  A      M     SP V +WN +ISG  + G    A++ F NM          T+ S
Sbjct: 278 LKDARLLFGEMS----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 337

Query: 344 ILPACAGLRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKN 403
           +L A   + +L LG  +HA A+K  L +NIYV  SLV MYSKC + + A +VF   E+KN
Sbjct: 338 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 397

Query: 404 ITLWNEIIATYLNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLS 463
              WN +I  Y + G+  + +E F  M+  G   D  T+ +LL+  A +       +  S
Sbjct: 398 DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 457

Query: 464 EMLQNDLAPNVVSLNVLVSGFQQSGLSYEALKLFQTKLC--------------------- 523
            +++  LA N+   N LV  + + G   +A ++F+ ++C                     
Sbjct: 458 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFE-RMCDRDNVTWNTIIGSYVQDENES 517

Query: 524 -TGCLLNKVITLPIRPNTVTITSALAACASLNLLCKGKEIHGYMLRNAFEDNHFVSSALI 583
               L  ++    I  +   + S L AC  ++ L +GK++H   ++   + +    S+LI
Sbjct: 518 EAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLI 577

Query: 584 DMYIKCGNIGSAIQVFRRIKNRNVVCWNALIAGLMKIMQPKVAIDFFCQMLVEGTKPSSV 643
           DMY KCG I  A +VF  +   +VV  NALIAG  +    + A+  F +ML  G  PS +
Sbjct: 578 DMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEI 637

Query: 644 TFSILLPALADRADLEARRQLHSYIIK 647
           TF+ ++ A      L    Q H  I K
Sbjct: 638 TFATIVEACHKPESLTLGTQFHGQITK 657

BLAST of Lag0004828 vs. ExPASy Swiss-Prot
Match: Q9LNU6 (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H21 PE=2 SV=2)

HSP 1 Score: 240.4 bits (612), Expect = 6.1e-62
Identity = 148/514 (28.79%), Postives = 244/514 (47.47%), Query Frame = 0

Query: 114 CVDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILK 173
           C +    +   IP+ T+ ++++LI A  +++ + +    F  M   G++PD +++P + K
Sbjct: 65  CFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFK 124

Query: 174 ACSRRQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSINVFDSMSEKDVVS 233
            C+     K GK IH       L  D FV  ++   Y  CG +  +  VFD MS+KDVV+
Sbjct: 125 VCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVT 184

Query: 234 WTALVSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLEAMQ 293
            +AL+ AY  +G L+E +     M++SG++ +++SWN ++SGF R               
Sbjct: 185 CSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR--------------- 244

Query: 294 ENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLS 353
                               +GY K+A+ +F  +      P+ VTV+S+LP+      L+
Sbjct: 245 --------------------SGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN 304

Query: 354 LGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYL 413
           +GR IH Y +K+ L  +  V  +++DMY K G       +F + E     + N  I    
Sbjct: 305 MGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 364

Query: 414 NQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVV 473
             G +D+ALE F   +   ++ +VV++ +++AG A+NG+ +EA +L  EM          
Sbjct: 365 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM---------- 424

Query: 474 SLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLPIRPNTVTITSALAACASLNLL 533
                    Q +G                          ++PN VTI S L AC ++  L
Sbjct: 425 ---------QVAG--------------------------VKPNHVTIPSMLPACGNIAAL 484

Query: 534 CKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALIAGL 593
             G+  HG+ +R    DN  V SALIDMY KCG I  +  VF  +  +N+VCWN+L+ G 
Sbjct: 485 GHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGF 498

Query: 594 MKIMQPKVAIDFFCQMLVEGTKPSSVTFSILLPA 628
               + K  +  F  ++    KP  ++F+ LL A
Sbjct: 545 SMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSA 498

BLAST of Lag0004828 vs. ExPASy TrEMBL
Match: A0A0A0KFW8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G399730 PE=4 SV=1)

HSP 1 Score: 1085.9 bits (2807), Expect = 0.0e+00
Identity = 549/677 (81.09%), Postives = 594/677 (87.74%), Query Frame = 0

Query: 1   MATLVDGFLSSNNAPSGLPSSSNLNFDLHPSFRFSRISMNVACRMHFSAVSARNRPQCQL 60
           MAT V GF SSNNA   LPS    +FDL+P+  FSR SMNVACRMHF AVSA NRP CQ 
Sbjct: 1   MATPVYGFASSNNASLRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFHAVSAHNRPNCQF 60

Query: 61  APIAKSTGRNDVGFNIPIARSLALFNRNVQVVKLSAHRVDSLFGNNLAKLY---VKCVDS 120
           +PIA  T RN  G N+PI RS ALF+ + QVVKL+  RVD+LFG  L K Y   VKCVDS
Sbjct: 61  SPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCRVDNLFGKKLTKFYVKDVKCVDS 120

Query: 121 DCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR 180
           D K+FDEIPERTL AYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR
Sbjct: 121 DSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR 180

Query: 181 RQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSINVFDSMSEKDVVSWTAL 240
           RQ+VKTGKM HGY IRKR+VSDI + NALMDFYGNCGDL+ SINVFDSMSEKDVVSWTAL
Sbjct: 181 RQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTAL 240

Query: 241 VSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLEAMQENGL 300
           VSAYIEEGLL+EAME FHSMQ+SGLKPDLISWNALVSGFARYGE +TAL YLEAMQE GL
Sbjct: 241 VSAYIEEGLLNEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEGL 300

Query: 301 SPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGRA 360
            PRVNSWN +ISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDL LGRA
Sbjct: 301 RPRVNSWNGVISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRA 360

Query: 361 IHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYLNQGK 420
           +HAYALK ELCTNIYVEGSLVDMYSKCGQDD AEE+FAKAEKKNITLWNEIIATY+NQGK
Sbjct: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGK 420

Query: 421 IDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLNV 480
              ALE FRSMQHHGLKPDVVTYNTLLAG+AKNGQKVEAY+LLS+MLQ +L PNV+SLNV
Sbjct: 421 NSWALEHFRSMQHHGLKPDVVTYNTLLAGYAKNGQKVEAYELLSDMLQENLVPNVISLNV 480

Query: 481 LVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLPIRPNTVTITSALAACASLNLLCKGK 540
           LVSGFQQSGL+YEAL+L QT LCTG LLNK I  P+ PNTVT+T+ALAACASLNLL KGK
Sbjct: 481 LVSGFQQSGLNYEALELCQTMLCTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKGK 540

Query: 541 EIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALIAGLMKIM 600
           EIHGYMLRN F +N+F+SSALI+MY KCG+I SAIQVF RIKNRNVVCWNALIAGL++ M
Sbjct: 541 EIHGYMLRNYFVNNYFISSALINMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTM 600

Query: 601 QPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESCNDLA 660
           Q K+A++ FCQMLVEG KPSS TFSILLPAL++RADL+ RRQLHSYIIKSQ LES NDLA
Sbjct: 601 QHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660

Query: 661 NVLSSDNFDGEIRLHGI 675
           NVLSSDN D  + LHGI
Sbjct: 661 NVLSSDNVDVGVLLHGI 677

BLAST of Lag0004828 vs. ExPASy TrEMBL
Match: A0A5A7VGH4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001190 PE=4 SV=1)

HSP 1 Score: 1083.9 bits (2802), Expect = 0.0e+00
Identity = 547/677 (80.80%), Postives = 597/677 (88.18%), Query Frame = 0

Query: 1   MATLVDGFLSSNNAPSGLPSSSNLNFDLHPSFRFSRISMNVACRMHFSAVSARNRPQCQL 60
           MAT +DGF+SSNNA   LPS    +FDL+P+  FSR SMNVACRMHF+AV ARNRP CQ 
Sbjct: 1   MATPLDGFVSSNNASPRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFNAVWARNRPNCQF 60

Query: 61  APIAKSTGRNDVGFNIPIARSLALFNRNVQVVKLSAHRVDSLFGNNLAKLY---VKCVDS 120
           +PIA  T  +  G N+PI  S  LFN N QVVKL+A RVD+LFG  L K Y   VKCVD 
Sbjct: 61  SPIAIRT--DCEGVNVPIPGSFVLFNHNSQVVKLNACRVDNLFGKKLTKFYVKDVKCVDG 120

Query: 121 DCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR 180
           D K+FDEIPER L  YAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPT+LKACSR
Sbjct: 121 DSKVFDEIPERALPTYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTVLKACSR 180

Query: 181 RQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSINVFDSMSEKDVVSWTAL 240
           RQ+VKTGKM+HGY IRKR+VSDI +GNALMDFYGNC DL  SINVFDSMSEKDVVSWTAL
Sbjct: 181 RQMVKTGKMVHGYAIRKRMVSDIVIGNALMDFYGNCRDLGSSINVFDSMSEKDVVSWTAL 240

Query: 241 VSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLEAMQENGL 300
           VSAYIEEGLL+EAM+ FHSMQ+SGLKPDLISWNALVSGFARYGE +TAL YLEAMQE GL
Sbjct: 241 VSAYIEEGLLNEAMKVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEGL 300

Query: 301 SPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGRA 360
            PRVNSWN +ISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLR+L LGRA
Sbjct: 301 RPRVNSWNGVISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRNLGLGRA 360

Query: 361 IHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYLNQGK 420
           +HAYALK ELCTNIYVEGSLVDMYSKCGQDD+AEEVFAKAEKKN+TLWNEIIATY+NQGK
Sbjct: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDHAEEVFAKAEKKNVTLWNEIIATYVNQGK 420

Query: 421 IDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLNV 480
             QALERFRSMQHHGLKPDVVTYNTLLAG+AKNG+KVEAY+LLS+ML+ +L PNV+SLNV
Sbjct: 421 NSQALERFRSMQHHGLKPDVVTYNTLLAGYAKNGKKVEAYELLSDMLRENLVPNVISLNV 480

Query: 481 LVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLPIRPNTVTITSALAACASLNLLCKGK 540
           LVSGFQ SGLSYEAL+L QT LCTG LLNKVI  P+ P+TVTIT+ALAACASLNLL KGK
Sbjct: 481 LVSGFQNSGLSYEALELCQTMLCTGSLLNKVIAFPVIPDTVTITAALAACASLNLLHKGK 540

Query: 541 EIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALIAGLMKIM 600
           EIHGYMLRN FE+NHF+SSALI+MY KC NI SAIQVF RIKNRNVVCWNALIAGL++IM
Sbjct: 541 EIHGYMLRNYFENNHFISSALINMYAKCENIDSAIQVFSRIKNRNVVCWNALIAGLLRIM 600

Query: 601 QPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESCNDLA 660
           Q +VA++ FCQMLVEG KPSS TFSILLPAL++RADL+ RRQLHSYIIKSQ LES NDLA
Sbjct: 601 QHEVAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660

Query: 661 NVLSSDNFDGEIRLHGI 675
           NVLSSDNFD  + LHGI
Sbjct: 661 NVLSSDNFDVGVLLHGI 675

BLAST of Lag0004828 vs. ExPASy TrEMBL
Match: A0A1S3BDB0 (pentatricopeptide repeat-containing protein At1g19720-like OS=Cucumis melo OX=3656 GN=LOC103488425 PE=4 SV=1)

HSP 1 Score: 1082.4 bits (2798), Expect = 0.0e+00
Identity = 546/677 (80.65%), Postives = 597/677 (88.18%), Query Frame = 0

Query: 1   MATLVDGFLSSNNAPSGLPSSSNLNFDLHPSFRFSRISMNVACRMHFSAVSARNRPQCQL 60
           MAT +DGF+SSNNA   LPS    +FDL+P+  FSR SMNVACRMHF+AV ARNRP CQ 
Sbjct: 1   MATPLDGFVSSNNASPRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFNAVWARNRPNCQF 60

Query: 61  APIAKSTGRNDVGFNIPIARSLALFNRNVQVVKLSAHRVDSLFGNNLAKLY---VKCVDS 120
           +PIA  T  +  G N+PI  S  LF+ N QVVKL+A RVD+LFG  L K Y   VKCVD 
Sbjct: 61  SPIAIRT--DCEGVNVPIPGSFVLFDHNSQVVKLNACRVDNLFGKKLTKFYVKDVKCVDG 120

Query: 121 DCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR 180
           D K+FDEIPERTL  YAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPT+LKACSR
Sbjct: 121 DSKVFDEIPERTLPTYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTVLKACSR 180

Query: 181 RQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSINVFDSMSEKDVVSWTAL 240
           RQ+VKTGKM+HGY IRKR+VSDI +GNALMDFYGNC DL  SINVFDSMSEKDVVSWTAL
Sbjct: 181 RQMVKTGKMVHGYAIRKRMVSDIVIGNALMDFYGNCRDLGSSINVFDSMSEKDVVSWTAL 240

Query: 241 VSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLEAMQENGL 300
           VSAYIEEGLL+EAM+ FHSMQ+SGLKPDLISWNALVSGFARYGE +TAL YLEAMQE GL
Sbjct: 241 VSAYIEEGLLNEAMKVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEGL 300

Query: 301 SPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGRA 360
            PRVNSWN +ISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLR+L LGRA
Sbjct: 301 RPRVNSWNGVISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRNLGLGRA 360

Query: 361 IHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYLNQGK 420
           +HAYALK ELCTNIYVEGSLVDMYSKCGQDD+AEEVFAKAEKKN+TLWNEIIATY+NQGK
Sbjct: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDHAEEVFAKAEKKNVTLWNEIIATYVNQGK 420

Query: 421 IDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLNV 480
             QALERFRSMQHHGLKPDVVTYNTLLAG+AKNG+KVEAY+LLS+ML+ +L PNV+SLNV
Sbjct: 421 NSQALERFRSMQHHGLKPDVVTYNTLLAGYAKNGKKVEAYELLSDMLRENLVPNVISLNV 480

Query: 481 LVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLPIRPNTVTITSALAACASLNLLCKGK 540
           LVSGFQ SGLSYEAL+L QT LCTG LLNK I  P+ P+TVTIT+ALAACASLNLL KGK
Sbjct: 481 LVSGFQNSGLSYEALELCQTMLCTGSLLNKAIAFPVIPDTVTITAALAACASLNLLHKGK 540

Query: 541 EIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALIAGLMKIM 600
           EIHGYMLRN FE+NHF+SSALI+MY KC NI SAIQVF RIKNRNVVCWNALIAGL++IM
Sbjct: 541 EIHGYMLRNYFENNHFISSALINMYAKCENIDSAIQVFSRIKNRNVVCWNALIAGLLRIM 600

Query: 601 QPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESCNDLA 660
           Q +VA++ FCQMLVEG KPSS TFSILLPAL++RADL+ RRQLHSYIIKSQ LES NDLA
Sbjct: 601 QHEVAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660

Query: 661 NVLSSDNFDGEIRLHGI 675
           NVLSSDNFD  + LHGI
Sbjct: 661 NVLSSDNFDVGVLLHGI 675

BLAST of Lag0004828 vs. ExPASy TrEMBL
Match: A0A6J1BQ73 (pentatricopeptide repeat-containing protein At1g19720-like OS=Momordica charantia OX=3673 GN=LOC111004749 PE=4 SV=1)

HSP 1 Score: 1076.2 bits (2782), Expect = 0.0e+00
Identity = 553/679 (81.44%), Postives = 583/679 (85.86%), Query Frame = 0

Query: 1   MATLVDGFLSSNNAPSGL--PSSSNLNFDLHPSFRFSRISMNVACRMHFSAVSARNRPQC 60
           MATL D FLS NNA   L  PSSS LNFDLHPS  FSR SMN+ CRMHF+AVSA N P+ 
Sbjct: 1   MATLKDAFLSPNNASPVLPYPSSSKLNFDLHPSLGFSRNSMNLNCRMHFTAVSAHNPPRG 60

Query: 61  QLAPIAKSTGRNDVGFNIPIARSLALFNRN---------VQVVKLSAHRVDSLFGNNLAK 120
           Q  P AKS  RNDVG NIPIARSL L N N           VVK + HRVDSLFGN L K
Sbjct: 61  QFVPAAKSIDRNDVGSNIPIARSLVLLNSNFLSDSRQTRAHVVKSNVHRVDSLFGNKLPK 120

Query: 121 LY---VKCVDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKY 180
                VKCVDSDCKLFDEIPERTL AYAALIRAYCRS+KWNELFAAFRSMVDEGI PDKY
Sbjct: 121 FNAQDVKCVDSDCKLFDEIPERTLPAYAALIRAYCRSQKWNELFAAFRSMVDEGIQPDKY 180

Query: 181 LVPTILKACSRRQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSINVFDSM 240
           LVPTILKACS RQ+VKTGKM+HG+VIRK  VSDIFVGNALM+FYGNCGDL  SI VFDSM
Sbjct: 181 LVPTILKACSGRQLVKTGKMVHGFVIRKTFVSDIFVGNALMNFYGNCGDLRSSIVVFDSM 240

Query: 241 SEKDVVSWTALVSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYGEIDTAL 300
           SEKDVVSWTALVSAY+EEGLLDEAME FH+MQ+SGLKPDLISWNALVSGFARYGEID AL
Sbjct: 241 SEKDVVSWTALVSAYMEEGLLDEAMEVFHNMQSSGLKPDLISWNALVSGFARYGEIDIAL 300

Query: 301 EYLEAMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPAC 360
           +YLE MQE GL+PRVNSWN IISGCVQNGYF+DALDVFINML FPENPNSVTVASILPAC
Sbjct: 301 QYLEEMQEKGLTPRVNSWNGIISGCVQNGYFRDALDVFINMLFFPENPNSVTVASILPAC 360

Query: 361 AGLRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWN 420
           AGLRD+ LGRAIHAYALK ELC N+YVEGSLVDMYSKCGQD  AE+VFA+AEKKNITLWN
Sbjct: 361 AGLRDIGLGRAIHAYALKSELCVNLYVEGSLVDMYSKCGQDYCAEKVFARAEKKNITLWN 420

Query: 421 EIIATYLNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQN 480
           EIIA Y+NQGK+ QALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQ 
Sbjct: 421 EIIAAYVNQGKVSQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQK 480

Query: 481 DLAPNVVSLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLPIRPNTVTITSALAA 540
           DL PNVVSLNVLVSGFQQ GLSYEALKLF+T LCTGCLLNKVITLPIRPNTVTIT+ALAA
Sbjct: 481 DLTPNVVSLNVLVSGFQQFGLSYEALKLFRTMLCTGCLLNKVITLPIRPNTVTITAALAA 540

Query: 541 CASLNLLCKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCW 600
           CA LNL  +GKEIHGYMLRN F DNHF+SSALID YIKC +I SAI+VFRRIKNRNVVCW
Sbjct: 541 CADLNLSHQGKEIHGYMLRNGFHDNHFISSALIDTYIKCEDIDSAIRVFRRIKNRNVVCW 600

Query: 601 NALIAGLMKIMQPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIK 660
           NALIAG MK  QPKVAI+ FC+MLVEG KPSSVT SIL PAL    DL+ RRQLHSYI K
Sbjct: 601 NALIAGHMKERQPKVAIELFCEMLVEGIKPSSVTLSILPPALDLGVDLKVRRQLHSYITK 660

Query: 661 SQLLESCNDLANVLSSDNF 666
           SQLLE CNDLANV S   F
Sbjct: 661 SQLLEWCNDLANVSSFGKF 679

BLAST of Lag0004828 vs. ExPASy TrEMBL
Match: A0A6J1K3Z4 (pentatricopeptide repeat-containing protein At1g19720-like OS=Cucurbita maxima OX=3661 GN=LOC111492109 PE=4 SV=1)

HSP 1 Score: 1040.0 bits (2688), Expect = 4.2e-300
Identity = 524/639 (82.00%), Postives = 567/639 (88.73%), Query Frame = 0

Query: 39  MNVACRMHFSAVSARNRPQCQLAPIAKSTGRNDVGFNIPIARSLALFNRNVQVVKLSAHR 98
           MNVACRMH +A+SA NR QC+ AP+AK    ND G N+PIARS ALFNRNVQ VKL+A R
Sbjct: 1   MNVACRMHSTAISAHNRSQCRFAPVAKCPDSNDAGSNVPIARSFALFNRNVQFVKLNARR 60

Query: 99  VDSLFGNNLAKLYVK---CVDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRS 158
           VDSL GN LAK+  K   CVDSD K+FDE+PER L AY ALIRAYCRSEKWNELFAAF S
Sbjct: 61  VDSLIGNKLAKVCAKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGS 120

Query: 159 MVDEGILPDKYLVPTILKACSRRQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGD 218
           MV+EGILPDKYLVPTILKACS+ Q VKTGKMIHGY IRKRLVSDIF+GNALMDFYGNCGD
Sbjct: 121 MVEEGILPDKYLVPTILKACSKIQAVKTGKMIHGYAIRKRLVSDIFIGNALMDFYGNCGD 180

Query: 219 LTFSINVFDSMSEKDVVSWTALVSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSG 278
           L FSINVFDSMSEKDVVSWTALVSAY+EEGLLDEAMEAFHSMQ+SGLKPDLISWNALVSG
Sbjct: 181 LRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGLKPDLISWNALVSG 240

Query: 279 FARYGEIDTALEYLEAMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPN 338
           FAR+G+I TAL+YLEAMQE GLSPRVNSWN +ISGCV NGYFKDAL VFINMLLFPENPN
Sbjct: 241 FARHGKIGTALKYLEAMQEQGLSPRVNSWNGVISGCVLNGYFKDALYVFINMLLFPENPN 300

Query: 339 SVTVASILPACAGLRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFA 398
           SVTVAS+LPACAGLR L LGRA+HAYALK ELCTNIYVEGSLV+MYSKCGQDDYAEE+FA
Sbjct: 301 SVTVASVLPACAGLRYLGLGRAVHAYALKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFA 360

Query: 399 KAEKKNITLWNEIIATYLNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVE 458
           KAEKKNITLWNEIIATY+NQG+  QALERFRSMQHHGL+PDVVTYNTLLAG+AKNGQKVE
Sbjct: 361 KAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRPDVVTYNTLLAGYAKNGQKVE 420

Query: 459 AYKLLSEMLQNDLAPNVVSLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLPIRP 518
           AY LL+EMLQ DLAPNVVSLN LVSGFQQSGLSYEAL+LFQT L T CL++KVIT PIRP
Sbjct: 421 AYNLLTEMLQKDLAPNVVSLNALVSGFQQSGLSYEALELFQTMLYTACLVDKVITSPIRP 480

Query: 519 N-TVTITSALAACASLNLLCKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQV 578
           N  +TIT+ALAACASLNLL KGKEIHGYMLRN FEDNH VSSALIDMY KC  I S IQV
Sbjct: 481 NIVITITAALAACASLNLLHKGKEIHGYMLRNGFEDNHIVSSALIDMYSKCECIDSVIQV 540

Query: 579 FRRIKNRNVVCWNALIAGLMKIMQPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADL 638
           F  IKNRN VCWNALIAG  ++MQPK+A++ FCQMLVEG KPSS +FSILLPALA R DL
Sbjct: 541 FGGIKNRNEVCWNALIAGFRRVMQPKMAVELFCQMLVEGIKPSSDSFSILLPALA-RTDL 600

Query: 639 EARRQLHSYIIKSQLLESCNDLANVLSSDNFDGEIRLHG 674
             RRQLHSYIIKSQL+ESC+DL+ VLSS+ FDG + LHG
Sbjct: 601 IMRRQLHSYIIKSQLVESCDDLSYVLSSNEFDGGVMLHG 638

BLAST of Lag0004828 vs. TAIR 10
Match: AT1G19720.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 350.5 bits (898), Expect = 3.0e-96
Identity = 186/531 (35.03%), Postives = 304/531 (57.25%), Query Frame = 0

Query: 100 DSLFGNNLAKLYVK--CVDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMV 159
           D      L  +Y K  C+    K+FD + ER L  ++A+I AY R  +W E+   FR M+
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173

Query: 160 DEGILPDKYLVPTILKACSRRQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLT 219
            +G+LPD +L P IL+ C+    V+ GK+IH  VI+  + S + V N+++  Y  CG+L 
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233

Query: 220 FSINVFDSMSEKDVVSWTALVSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFA 279
           F+   F  M E+DV++W +++ AY + G  +EA+E    M+  G+ P L++WN L+ G+ 
Sbjct: 234 FATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293

Query: 280 RYGEIDTALEYLEAMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSV 339
           + G+ D A++ ++ M+  G++  V +W A+ISG + NG    ALD+F  M L    PN+V
Sbjct: 294 QLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353

Query: 340 TVASILPACAGLRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKA 399
           T+ S + AC+ L+ ++ G  +H+ A+K     ++ V  SLVDMYSKCG+ + A +VF   
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413

Query: 400 EKKNITLWNEIIATYLNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAY 459
           + K++  WN +I  Y   G   +A E F  MQ   L+P+++T+NT+++G+ KNG + EA 
Sbjct: 414 KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAM 473

Query: 460 KLLSEMLQN-DLAPNVVSLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLPIRPN 519
            L   M ++  +  N  + N++++G+ Q+G   EAL+LF+          K+      PN
Sbjct: 474 DLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFR----------KMQFSRFMPN 533

Query: 520 TVTITSALAACASLNLLCKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFR 579
           +VTI S L ACA+L      +EIHG +LR   +  H V +AL D Y K G+I  +  +F 
Sbjct: 534 SVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFL 593

Query: 580 RIKNRNVVCWNALIAGLMKIMQPKVAIDFFCQMLVEGTKPSSVTFSILLPA 628
            ++ ++++ WN+LI G +       A+  F QM  +G  P+  T S ++ A
Sbjct: 594 GMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634

BLAST of Lag0004828 vs. TAIR 10
Match: AT4G01030.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 286.6 bits (732), Expect = 5.3e-77
Identity = 168/517 (32.50%), Postives = 272/517 (52.61%), Query Frame = 0

Query: 111 YVKCVDSDC--KLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLV 170
           Y +CV      KLFDE+P+R   A+  ++    RS  W +    FR M   G       +
Sbjct: 33  YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTM 92

Query: 171 PTILKACSRRQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSINVFDSMSE 230
             +L+ CS ++    G+ IHGYV+R  L S++ + N+L+  Y   G L  S  VF+SM +
Sbjct: 93  VKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD 152

Query: 231 KDVVSWTALVSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYGEIDTALEY 290
           +++ SW +++S+Y + G +D+A+     M+  GLKPD+++WN+L+SG+A  G    A+  
Sbjct: 153 RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAV 212

Query: 291 LEAMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAG 350
           L+ MQ  GL P  +S                                   ++S+L A A 
Sbjct: 213 LKRMQIAGLKPSTSS-----------------------------------ISSLLQAVAE 272

Query: 351 LRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEI 410
              L LG+AIH Y L+ +L  ++YVE +L+DMY K G   YA  VF   + KNI  WN +
Sbjct: 273 PGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSL 332

Query: 411 IATYLNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDL 470
           ++       +  A      M+  G+KPD +T+N+L +G+A  G+  +A  ++ +M +  +
Sbjct: 333 VSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGV 392

Query: 471 APNVVSLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLPIRPNTVTITSALAACA 530
           APNVVS   + SG  ++G    ALK+F           K+    + PN  T+++ L    
Sbjct: 393 APNVVSWTAIFSGCSKNGNFRNALKVF----------IKMQEEGVGPNAATMSTLLKILG 452

Query: 531 SLNLLCKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNA 590
            L+LL  GKE+HG+ LR     + +V++AL+DMY K G++ SAI++F  IKN+++  WN 
Sbjct: 453 CLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNC 504

Query: 591 LIAGLMKIMQPKVAIDFFCQMLVEGTKPSSVTFSILL 626
           ++ G     + +  I  F  ML  G +P ++TF+ +L
Sbjct: 513 MLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 504

BLAST of Lag0004828 vs. TAIR 10
Match: AT5G55740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 286.6 bits (732), Expect = 5.3e-77
Identity = 173/581 (29.78%), Postives = 294/581 (50.60%), Query Frame = 0

Query: 107 LAKLYVKC--VDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPD 166
           L   Y KC  ++    LF ++  R + ++AA+I   CR          F  M++  I PD
Sbjct: 113 LVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPD 172

Query: 167 KYLVPTILKACSRRQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSINVFD 226
            ++VP + KAC   +  + G+ +HGYV++  L   +FV ++L D YG CG L  +  VFD
Sbjct: 173 NFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFD 232

Query: 227 SMSEKDVVSWTALVSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYG---- 286
            + +++ V+W AL+  Y++ G  +EA+  F  M+  G++P  ++ +  +S  A  G    
Sbjct: 233 EIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEE 292

Query: 287 -------------EIDTAL--------------EYLEAMQENGLSPRVNSWNAIISGCVQ 346
                        E+D  L              EY E + +      V +WN IISG VQ
Sbjct: 293 GKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQ 352

Query: 347 NGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGRAIHAYALKRELCTNIYV 406
            G  +DA+ +   M L     + VT+A+++ A A   +L LG+ +  Y ++    ++I +
Sbjct: 353 QGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVL 412

Query: 407 EGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYLNQGKIDQALERFRSMQHHGL 466
             +++DMY+KCG    A++VF    +K++ LWN ++A Y   G   +AL  F  MQ  G+
Sbjct: 413 ASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGV 472

Query: 467 KPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLNVLVSGFQQSGLSYEALK 526
            P+V+T+N ++    +NGQ  EA  +  +M  + + PN++S   +++G  Q+G S EA+ 
Sbjct: 473 PPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAI- 532

Query: 527 LFQTKLCTGCLLNKVITLPIRPNTVTITSALAACASLNLLCKGKEIHGYMLRNAFEDNHF 586
                      L K+    +RPN  +IT AL+ACA L  L  G+ IHGY++RN    +  
Sbjct: 533 ---------LFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLV 592

Query: 587 -VSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALIAGLMKIMQPKVAIDFFCQMLVE 646
            + ++L+DMY KCG+I  A +VF       +   NA+I+        K AI  +  +   
Sbjct: 593 SIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGV 652

Query: 647 GTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESC 654
           G KP ++T + +L A     D+    ++ + I+  + ++ C
Sbjct: 653 GLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPC 683

BLAST of Lag0004828 vs. TAIR 10
Match: AT3G09040.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 253.4 bits (646), Expect = 4.9e-67
Identity = 169/567 (29.81%), Postives = 280/567 (49.38%), Query Frame = 0

Query: 104 GNNLAKLYVKC--VDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGI 163
           GN +  LY KC  V    K FD + E+ ++A+ +++  Y    K  ++  +F S+ +  I
Sbjct: 98  GNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQI 157

Query: 164 LPDKYLVPTILKACSRRQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSIN 223
            P+K+    +L  C+R   V+ G+ IH  +I+  L  + + G AL+D Y  C  ++ +  
Sbjct: 158 FPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARR 217

Query: 224 VFDSMSEKDVVSWTALVSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYGE 283
           VF+ + + + V WT L S Y++ GL +EA+  F  M+  G +PD +++  +++ + R G+
Sbjct: 218 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK 277

Query: 284 IDTALEYLEAMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVAS 343
           +  A      M     SP V +WN +ISG  + G    A++ F NM          T+ S
Sbjct: 278 LKDARLLFGEMS----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 337

Query: 344 ILPACAGLRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKN 403
           +L A   + +L LG  +HA A+K  L +NIYV  SLV MYSKC + + A +VF   E+KN
Sbjct: 338 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 397

Query: 404 ITLWNEIIATYLNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLS 463
              WN +I  Y + G+  + +E F  M+  G   D  T+ +LL+  A +       +  S
Sbjct: 398 DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 457

Query: 464 EMLQNDLAPNVVSLNVLVSGFQQSGLSYEALKLFQTKLC--------------------- 523
            +++  LA N+   N LV  + + G   +A ++F+ ++C                     
Sbjct: 458 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFE-RMCDRDNVTWNTIIGSYVQDENES 517

Query: 524 -TGCLLNKVITLPIRPNTVTITSALAACASLNLLCKGKEIHGYMLRNAFEDNHFVSSALI 583
               L  ++    I  +   + S L AC  ++ L +GK++H   ++   + +    S+LI
Sbjct: 518 EAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLI 577

Query: 584 DMYIKCGNIGSAIQVFRRIKNRNVVCWNALIAGLMKIMQPKVAIDFFCQMLVEGTKPSSV 643
           DMY KCG I  A +VF  +   +VV  NALIAG  +    + A+  F +ML  G  PS +
Sbjct: 578 DMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEI 637

Query: 644 TFSILLPALADRADLEARRQLHSYIIK 647
           TF+ ++ A      L    Q H  I K
Sbjct: 638 TFATIVEACHKPESLTLGTQFHGQITK 657

BLAST of Lag0004828 vs. TAIR 10
Match: AT1G20230.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 240.4 bits (612), Expect = 4.3e-63
Identity = 148/514 (28.79%), Postives = 244/514 (47.47%), Query Frame = 0

Query: 114 CVDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILK 173
           C +    +   IP+ T+ ++++LI A  +++ + +    F  M   G++PD +++P + K
Sbjct: 65  CFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFK 124

Query: 174 ACSRRQVVKTGKMIHGYVIRKRLVSDIFVGNALMDFYGNCGDLTFSINVFDSMSEKDVVS 233
            C+     K GK IH       L  D FV  ++   Y  CG +  +  VFD MS+KDVV+
Sbjct: 125 VCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVT 184

Query: 234 WTALVSAYIEEGLLDEAMEAFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLEAMQ 293
            +AL+ AY  +G L+E +     M++SG++ +++SWN ++SGF R               
Sbjct: 185 CSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR--------------- 244

Query: 294 ENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLS 353
                               +GY K+A+ +F  +      P+ VTV+S+LP+      L+
Sbjct: 245 --------------------SGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN 304

Query: 354 LGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYL 413
           +GR IH Y +K+ L  +  V  +++DMY K G       +F + E     + N  I    
Sbjct: 305 MGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 364

Query: 414 NQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVV 473
             G +D+ALE F   +   ++ +VV++ +++AG A+NG+ +EA +L  EM          
Sbjct: 365 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM---------- 424

Query: 474 SLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLPIRPNTVTITSALAACASLNLL 533
                    Q +G                          ++PN VTI S L AC ++  L
Sbjct: 425 ---------QVAG--------------------------VKPNHVTIPSMLPACGNIAAL 484

Query: 534 CKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALIAGL 593
             G+  HG+ +R    DN  V SALIDMY KCG I  +  VF  +  +N+VCWN+L+ G 
Sbjct: 485 GHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGF 498

Query: 594 MKIMQPKVAIDFFCQMLVEGTKPSSVTFSILLPA 628
               + K  +  F  ++    KP  ++F+ LL A
Sbjct: 545 SMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSA 498

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038884429.10.0e+0084.59pentatricopeptide repeat-containing protein At1g19720-like [Benincasa hispida][more]
KAG6598662.10.0e+0082.27Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG7029606.10.0e+0081.98Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_004146805.10.0e+0081.09pentatricopeptide repeat-containing protein At1g19720 [Cucumis sativus] >KGN4774... [more]
KAA0064811.10.0e+0080.80pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Q9FXH14.2e-9535.03Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX... [more]
Q9SV267.4e-7632.50Pentatricopeptide repeat-containing protein At4g01030, mitochondrial OS=Arabidop... [more]
Q9FM647.4e-7629.78Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidop... [more]
Q9SS837.0e-6629.81Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop... [more]
Q9LNU66.1e-6228.79Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A0A0KFW80.0e+0081.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G399730 PE=4 SV=1[more]
A0A5A7VGH40.0e+0080.80Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BDB00.0e+0080.65pentatricopeptide repeat-containing protein At1g19720-like OS=Cucumis melo OX=36... [more]
A0A6J1BQ730.0e+0081.44pentatricopeptide repeat-containing protein At1g19720-like OS=Momordica charanti... [more]
A0A6J1K3Z44.2e-30082.00pentatricopeptide repeat-containing protein At1g19720-like OS=Cucurbita maxima O... [more]
Match NameE-valueIdentityDescription
AT1G19720.13.0e-9635.03Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT4G01030.15.3e-7732.50pentatricopeptide (PPR) repeat-containing protein [more]
AT5G55740.15.3e-7729.78Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G09040.14.9e-6729.81Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G20230.14.3e-6328.79Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 503..664
e-value: 1.5E-26
score: 95.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 90..183
e-value: 3.4E-11
score: 44.8
coord: 184..278
e-value: 1.5E-21
score: 78.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 401..502
e-value: 9.3E-24
score: 86.4
coord: 279..400
e-value: 1.4E-19
score: 72.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 230..424
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 379..467
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 435..482
e-value: 7.2E-13
score: 48.5
coord: 581..629
e-value: 4.0E-12
score: 46.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 405..433
e-value: 1.1
score: 9.7
coord: 132..161
e-value: 0.0026
score: 17.9
coord: 376..402
e-value: 0.92
score: 9.9
coord: 204..230
e-value: 0.98
score: 9.8
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 254..314
e-value: 9.8E-11
score: 41.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 232..265
e-value: 6.3E-8
score: 30.3
coord: 303..328
e-value: 5.5E-5
score: 21.1
coord: 132..164
e-value: 9.3E-7
score: 26.6
coord: 438..472
e-value: 5.8E-7
score: 27.3
coord: 405..437
e-value: 4.3E-5
score: 21.4
coord: 584..617
e-value: 9.7E-5
score: 20.3
coord: 267..299
e-value: 2.7E-7
score: 28.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 582..616
score: 9.755614
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 129..163
score: 11.136739
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 436..470
score: 12.156139
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 401..435
score: 11.016164
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 300..334
score: 8.95544
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 265..299
score: 12.58363
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 230..264
score: 12.83574
NoneNo IPR availablePANTHERPTHR47928:SF72SUBFAMILY NOT NAMEDcoord: 15..611
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 15..611

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0004828.1Lag0004828.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding