Lag0004814 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGTCGAGCCTCGTTTCTCCATCACTTGTTTGTTTGCCTCATAGTTGGACTCATGTGCGGATACTTGGTCTGCGAAGTGACTACCGGACTCAGTCGAGCCCCATTCCTTGTCTAATGGTCGGCCTTAGCCTTGGCATGAGGACGAGCACTTTCCCTGCATGGCTTGAGAAGTTTGAGGGAAGCTTGGGGAGGCGTTGGGATTTCCCAGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGTGCCTCTCTTCAAACGTCGTGGTCATCCCATGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTGGGAATTTCCCAAGCCTCTCTTCAAGCTGCATAGTCATCCCAGGGGTGCGTACACTCTTATGGGGAAAAAGCTTGGGGAGGCCTGGGAATTTCCCAAGCCTCTCTTCAAGCTGCATAGTCATCCCAGGGGTGCGAACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGAAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAATATGTATGCTCAAACTGCCTTCTATCATATTTCCACACAATTTTGATGGCATATCAAGCAACAAAGTATTTTAA ATGAGGTCGAGCCTCGTTTCTCCATCACTTGTTTGTTTGCCTCATAGTTGGACTCATGTGCGGATACTTGGTCTGCGAAGTGACTACCGGACTCAGTCGAGCCCCATTCCTTGTCTAATGGTCGGCCTTAGCCTTGGCATGAGGACGAGCACTTTCCCTGCATGGCTTGAGAAGTTTGAGGGAAGCTTGGGGAGGCGTTGGGATTTCCCAGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGTGCCTCTCTTCAAACGTCGTGGTCATCCCATGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTGGGAATTTCCCAAGCCTCTCTTCAAGCTGCATAGTCATCCCAGGGGTGCGTACACTCTTATGGGGAAAAAGCTTGGGGAGGCCTGGGAATTTCCCAAGCCTCTCTTCAAGCTGCATAGTCATCCCAGGGGTGCGAACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGAAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAATATGTATGCTCAAACTGCCTTCTATCATATTTCCACACAATTTTGATGGCATATCAAGCAACAAAGTATTTTAA ATGAGGTCGAGCCTCGTTTCTCCATCACTTGTTTGTTTGCCTCATAGTTGGACTCATGTGCGGATACTTGGTCTGCGAAGTGACTACCGGACTCAGTCGAGCCCCATTCCTTGTCTAATGGTCGGCCTTAGCCTTGGCATGAGGACGAGCACTTTCCCTGCATGGCTTGAGAAGTTTGAGGGAAGCTTGGGGAGGCGTTGGGATTTCCCAGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGTGCCTCTCTTCAAACGTCGTGGTCATCCCATGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTGGGAATTTCCCAAGCCTCTCTTCAAGCTGCATAGTCATCCCAGGGGTGCGTACACTCTTATGGGGAAAAAGCTTGGGGAGGCCTGGGAATTTCCCAAGCCTCTCTTCAAGCTGCATAGTCATCCCAGGGGTGCGAACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGAAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAATATGTATGCTCAAACTGCCTTCTATCATATTTCCACACAATTTTGATGGCATATCAAGCAACAAAGTATTTTAA MRSSLVSPSLVCLPHSWTHVRILGLRSDYRTQSSPIPCLMVGLSLGMRTSTFPAWLEKFEGSLGRRWDFPGPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKSLGRPRNFPVPLFKRRGHPMGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKSLGRPGNFPSLSSSCIVIPGVRTLLWGKSLGRPGNFPSLSSSCIVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWEKAWGGLGSSRASLQASSSSQGCVHSSGEICMLKLPSIIFPHNFDGISSNKVF Homology
BLAST of Lag0004814 vs. NCBI nr
Match: XP_021913216.1 (collagen alpha-1(I) chain-like [Zootermopsis nevadensis]) HSP 1 Score: 84.7 bits (208), Expect = 1.5e-12 Identity = 76/181 (41.99%), Postives = 81/181 (44.75%), Query Frame = 0
BLAST of Lag0004814 vs. NCBI nr
Match: XP_015472393.2 (basic proline-rich protein-like, partial [Parus major]) HSP 1 Score: 72.4 bits (176), Expect = 7.7e-09 Identity = 63/180 (35.00%), Postives = 72/180 (40.00%), Query Frame = 0
BLAST of Lag0004814 vs. NCBI nr
Match: KAG8597368.1 (hypothetical protein GDO81_002266 [Engystomops pustulosus]) HSP 1 Score: 69.7 bits (169), Expect = 5.0e-08 Identity = 52/153 (33.99%), Postives = 63/153 (41.18%), Query Frame = 0
BLAST of Lag0004814 vs. NCBI nr
Match: KDR22633.1 (hypothetical protein L798_12765, partial [Zootermopsis nevadensis]) HSP 1 Score: 66.2 bits (160), Expect = 5.5e-07 Identity = 55/135 (40.74%), Postives = 57/135 (42.22%), Query Frame = 0
BLAST of Lag0004814 vs. NCBI nr
Match: XP_030053253.1 (corneodesmosin [Microcaecilia unicolor]) HSP 1 Score: 59.7 bits (143), Expect = 5.1e-05 Identity = 39/118 (33.05%), Postives = 57/118 (48.31%), Query Frame = 0
BLAST of Lag0004814 vs. ExPASy TrEMBL
Match: A0A067RI20 (Chitin-binding type-2 domain-containing protein (Fragment) OS=Zootermopsis nevadensis OX=136037 GN=L798_12765 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.7e-07 Identity = 55/135 (40.74%), Postives = 57/135 (42.22%), Query Frame = 0
BLAST of Lag0004814 vs. ExPASy TrEMBL
Match: A0A6P7XL68 (corneodesmosin OS=Microcaecilia unicolor OX=1415580 GN=CDSN PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.5e-05 Identity = 39/118 (33.05%), Postives = 57/118 (48.31%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|