Lag0004682 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0004682
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	RING-type domain-containing protein
Location	chr6: 6060665 .. 6062255 (+)
RNA-Seq Expression	Lag0004682
Synteny	Lag0004682

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTATCGGCTATCGAGGTCTTCTAGTTCTTGTAAGGATTCTCTGAAAATCCTCGAAGAAGATGTGAATCGCGCCAATGCTCTGTGAGTATCCCTTTTCCCTTCGCTATTTATCTTCTCTGTTCATAGAAAAATCGATGAATAGGTTTGATTTTTTATGAAATTATGGTGGGAAGTTTGTATGATCTGTTTGTTTATCTGATTTTTCCAATTCTGGCTTCTGGGTTTACAGGGCTGCTGCAATTCCAAGAGCCAAACATGGTTCATATCTCCAAATGAAATTGGTTTACAATCAATTTGCTCCACTCTTTCTGTTTTTGATGCAATGGGTGGATTTTTCATGCACTTGTTTACTTCCCAGATGCCTAAATTTCTTCCACATACTTGTTTACAAGGCTGGTTTCTTCTTTCTAGACTTGTTCAATGTTGGGTCATTTGTTGGAGATGTGGCTTTGTTTTTCTGTTTATATATACATATATCTGAGCTTGTCTTTGTTCTGTCACATGATGTCTGTCATTGGCTTTGTTCAGGTTTATACAGATGGAAGGCCTAATATATCAGCACATGGAAGAAAGGCAACTATCAAAGATTTCTATGGTACATGTTTGCCTTATAAGAGTCTGTTTTGGAGTTTGGTTTTCAAAATAGTTCTCTGTTTCCATTTACAAAACTGTTTTCAAGGACTGAAATTGGGTGGTTATGGTTTTAGTGCAGTTTAAACACTTTATATACATCCATGATTATAGGAAGAAGAACATGAGTTGTTATAAAAACAGAGAGAATGTAGTTATTTGAACATGTTTTCACTAATTATCTTGGTACTTTCTTGGGCCTAACTAAGAAAAGAGAACAAGAGAAGAAACACAAAACAAATAAAACTTTATGCTAGGTTGCTTCATTCCAAGTCTAGGACTTTCAGTCGAGCAGTTAGGAAGCAGTTGAGTCGCGTCTCTCGGTTATGCCGCTTGCATGAAATCATTAGGCTTTGTATATTGTGGTATTGACATTGTATGATTTGGAGTTTATGAGCTTTGTTTATAACAAACTTCCTACTTCAGCTGTCATATTGCCATCCCTTCAACGGCTCCAAGCGAACGCTGAGGAGTTGGATAATGCTAAAGAGAAGCGTGTCAAGTTCGATAGTTCTAGTGAGAGAAGAGTCCAAGGAGATGGAAAACTCTCCAATAGTGATTTAGAGAGAGAAGATGAGTGTGGGATTTGCTTAGAACCTTCCACAAAAATGGTGTTGCCAAATTGCTGCCATTCAATGTGCATCAAATGTTACCACAATTGGTAACTACAAACCTTCTTAGAAATCATCACTTTCCTGTTCTGGGTTCGATTGCTTTAACGTCTCGACTCATGAATGACTTGTAGGAACACGAGATCGGAATCGTGCCCGTTTTGCCGGGGGAGCTTGAAGAGGATCAAATCAGAGGACTTGTGGGTGCTAACTTGCAGTGAAGATGTGGTTGATGCTGAAAAGGTTTCAAAGGAAGATCTGTCACGGTTCTATCTCTATATAAGCAGCCTGCCAAAGGAATATCCAGATGCTCTCTTCTTAGTTTATTATGAATACTTGATTTGA

mRNA sequence

ATGTATTATCGGCTATCGAGGTCTTCTAGTTCTTGTAAGGATTCTCTGAAAATCCTCGAAGAAGATGTGAATCGCGCCAATGCTCTGGCTGCTGCAATTCCAAGAGCCAAACATGGTTCATATCTCCAAATGAAATTGGTTTACAATCAATTTGCTCCACTCTTTCTGTTTTTGATGCAATGGGTGGATTTTTCATGCACTTGTTTACTTCCCAGATGCCTAAATTTCTTCCACATACTTGTTTACAAGGTTTATACAGATGGAAGGCCTAATATATCAGCACATGGAAGAAAGGCAACTATCAAAGATTTCTATGCTGTCATATTGCCATCCCTTCAACGGCTCCAAGCGAACGCTGAGGAGTTGGATAATGCTAAAGAGAAGCGTGTCAAGTTCGATAGTTCTAGTGAGAGAAGAGTCCAAGGAGATGGAAAACTCTCCAATAGTGATTTAGAGAGAGAAGATGAGTGTGGGATTTGCTTAGAACCTTCCACAAAAATGGTGTTGCCAAATTGCTGCCATTCAATGTGCATCAAATGTTACCACAATTGGAACACGAGATCGGAATCGTGCCCGTTTTGCCGGGGGAGCTTGAAGAGGATCAAATCAGAGGACTTGTGGGTGCTAACTTGCAGTGAAGATGTGGTTGATGCTGAAAAGGTTTCAAAGGAAGATCTGTCACGGTTCTATCTCTATATAAGCAGCCTGCCAAAGGAATATCCAGATGCTCTCTTCTTAGTTTATTATGAATACTTGATTTGA

Coding sequence (CDS)

ATGTATTATCGGCTATCGAGGTCTTCTAGTTCTTGTAAGGATTCTCTGAAAATCCTCGAAGAAGATGTGAATCGCGCCAATGCTCTGGCTGCTGCAATTCCAAGAGCCAAACATGGTTCATATCTCCAAATGAAATTGGTTTACAATCAATTTGCTCCACTCTTTCTGTTTTTGATGCAATGGGTGGATTTTTCATGCACTTGTTTACTTCCCAGATGCCTAAATTTCTTCCACATACTTGTTTACAAGGTTTATACAGATGGAAGGCCTAATATATCAGCACATGGAAGAAAGGCAACTATCAAAGATTTCTATGCTGTCATATTGCCATCCCTTCAACGGCTCCAAGCGAACGCTGAGGAGTTGGATAATGCTAAAGAGAAGCGTGTCAAGTTCGATAGTTCTAGTGAGAGAAGAGTCCAAGGAGATGGAAAACTCTCCAATAGTGATTTAGAGAGAGAAGATGAGTGTGGGATTTGCTTAGAACCTTCCACAAAAATGGTGTTGCCAAATTGCTGCCATTCAATGTGCATCAAATGTTACCACAATTGGAACACGAGATCGGAATCGTGCCCGTTTTGCCGGGGGAGCTTGAAGAGGATCAAATCAGAGGACTTGTGGGTGCTAACTTGCAGTGAAGATGTGGTTGATGCTGAAAAGGTTTCAAAGGAAGATCTGTCACGGTTCTATCTCTATATAAGCAGCCTGCCAAAGGAATATCCAGATGCTCTCTTCTTAGTTTATTATGAATACTTGATTTGA

Protein sequence

MYYRLSRSSSSCKDSLKILEEDVNRANALAAAIPRAKHGSYLQMKLVYNQFAPLFLFLMQWVDFSCTCLLPRCLNFFHILVYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANAEELDNAKEKRVKFDSSSERRVQGDGKLSNSDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEYPDALFLVYYEYLI

Homology

[Close]

BLAST of Lag0004682 vs. NCBI nr
Match: XP_022131399.1 (RING-H2 finger protein ATL47-like [Momordica charantia])

HSP 1 Score: 476.5 bits (1225), Expect = 1.4e-130
Identity = 229/253 (90.51%), Postives = 243/253 (96.05%), Query Frame = 0


Query: 1   MYYRLSRSSSSCKDSLKILEEDVNRANALAAAIPRAKHGSYLQMKLVYNQFAPLFLFLMQ 60
           MYYRL+RSSSSCKDS+K+LEEDV RANALAAAIPRAKHGSYLQMKLVYN  APLFLFLMQ
Sbjct: 1   MYYRLTRSSSSCKDSMKVLEEDVQRANALAAAIPRAKHGSYLQMKLVYNHLAPLFLFLMQ 60

Query: 61  WVDFSCTCLLPRCLNFFHILVYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANAE 120
           WVD SCTC+LPR LNFFHIL+YKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQAN +
Sbjct: 61  WVDCSCTCILPRYLNFFHILIYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANVD 120

Query: 121 ELDNAKEKRVKFDSSSERRVQGDGKLSNSDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180
           ELD+A ++RVK D+S+++R QGDGKLSN DLEREDECGICLEPSTKMVLPNCCHSMCIKC
Sbjct: 121 ELDSAIDRRVKADNSNDKRAQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180

Query: 181 YHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEY 240
           YHNWNTRSESCPFCRGSL+RIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEY
Sbjct: 181 YHNWNTRSESCPFCRGSLRRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEY 240

Query: 241 PDALFLVYYEYLI 254
           PDALFLVYYEYLI
Sbjct: 241 PDALFLVYYEYLI 253

[Close]

BLAST of Lag0004682 vs. NCBI nr
Match: XP_038885383.1 (E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida])

HSP 1 Score: 471.5 bits (1212), Expect = 4.7e-129
Identity = 231/253 (91.30%), Postives = 240/253 (94.86%), Query Frame = 0


Query: 1   MYYRLSRSSSSCKDSLKILEEDVNRANALAAAIPRAKHGSYLQMKLVYNQFAPLFLFLMQ 60
           MYYRL+R  SSCKDSLK+LEEDV  ANALAAAIPRAKHGSYLQMKLVYNQ AP FLFLMQ
Sbjct: 1   MYYRLAR--SSCKDSLKVLEEDVQHANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQ 60

Query: 61  WVDFSCTCLLPRCLNFFHILVYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANAE 120
           W+D SCTC+LPR LNFFHILVYKVYTDGRP+ISAHGRKAT+KDFYAVILPSLQRLQANAE
Sbjct: 61  WLDCSCTCILPRNLNFFHILVYKVYTDGRPSISAHGRKATVKDFYAVILPSLQRLQANAE 120

Query: 121 ELDNAKEKRVKFDSSSERRVQGDGKLSNSDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180
           E DNAKEKRVK  +SSE+RVQGDGKLS  DLEREDECGICLEPSTKMVLPNCCHSMCIKC
Sbjct: 121 EFDNAKEKRVKSGNSSEKRVQGDGKLSKGDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180

Query: 181 YHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEY 240
           YHNWNTRSESCPFCRGSLKRIKSEDLWVLTC+EDVVDAEKVSKEDLSRFYLYISSLPKEY
Sbjct: 181 YHNWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEY 240

Query: 241 PDALFLVYYEYLI 254
           PDALFLVYYEYLI
Sbjct: 241 PDALFLVYYEYLI 251

[Close]

BLAST of Lag0004682 vs. NCBI nr
Match: XP_008444404.1 (PREDICTED: uncharacterized protein LOC103487741 [Cucumis melo])

HSP 1 Score: 469.5 bits (1207), Expect = 1.8e-128
Identity = 229/253 (90.51%), Postives = 237/253 (93.68%), Query Frame = 0


Query: 1   MYYRLSRSSSSCKDSLKILEEDVNRANALAAAIPRAKHGSYLQMKLVYNQFAPLFLFLMQ 60
           MYYRL  + SSC DSLK+LEEDV RANALAAAIPRAKHGSYLQMKLVYNQ AP FLFLMQ
Sbjct: 1   MYYRL--AMSSCADSLKVLEEDVRRANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQ 60

Query: 61  WVDFSCTCLLPRCLNFFHILVYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANAE 120
           W+D SCTC+LPR LNFFHILVYKVYTDGRPNISAHGRKAT+KDFYAVILPSLQRLQAN E
Sbjct: 61  WLDCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQANVE 120

Query: 121 ELDNAKEKRVKFDSSSERRVQGDGKLSNSDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180
           E DNAKEK  K D+SSERR+QGDGKLSN DLEREDECGICLEPSTKMVLPNCCHSMCIKC
Sbjct: 121 EFDNAKEKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180

Query: 181 YHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEY 240
           YHNWN RSESCPFCRGSLKRIKSEDLWVLTC+EDVVDAEKVSKEDLSRFYLYISSLPKEY
Sbjct: 181 YHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEY 240

Query: 241 PDALFLVYYEYLI 254
           PDALFLVYYEYLI
Sbjct: 241 PDALFLVYYEYLI 251

[Close]

BLAST of Lag0004682 vs. NCBI nr
Match: KAA0061039.1 (hypothetical protein E6C27_scaffold501G001750 [Cucumis melo var. makuwa])

HSP 1 Score: 463.8 bits (1192), Expect = 9.7e-127
Identity = 229/257 (89.11%), Postives = 237/257 (92.22%), Query Frame = 0


Query: 1   MYYRLSRSSSSCKDSLKILEEDVNRANALAAAIPRAKHGSYLQMKLVYNQFAPLFLFLMQ 60
           MYYRL  + SSC DSLK+LEEDV RANALAAAIPRAKHGSYLQMKLVYNQ AP FLFLMQ
Sbjct: 1   MYYRL--AMSSCADSLKVLEEDVRRANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQ 60

Query: 61  WVDFSCTCLLPRCLNFFHILVYK----VYTDGRPNISAHGRKATIKDFYAVILPSLQRLQ 120
           W+D SCTC+LPR LNFFHILVYK    VYTDGRPNISAHGRKAT+KDFYAVILPSLQRLQ
Sbjct: 61  WLDCSCTCILPRYLNFFHILVYKAGLSVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQ 120

Query: 121 ANAEELDNAKEKRVKFDSSSERRVQGDGKLSNSDLEREDECGICLEPSTKMVLPNCCHSM 180
           AN EE DNAKEK  K D+SSERR+QGDGKLSN DLEREDECGICLEPSTKMVLPNCCHSM
Sbjct: 121 ANVEEFDNAKEKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSM 180

Query: 181 CIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSL 240
           CIKCYHNWN RSESCPFCRGSLKRIKSEDLWVLTC+EDVVDAEKVSKEDLSRFYLYISSL
Sbjct: 181 CIKCYHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSL 240

Query: 241 PKEYPDALFLVYYEYLI 254
           PKEYPDALFLVYYEYLI
Sbjct: 241 PKEYPDALFLVYYEYLI 255

[Close]

BLAST of Lag0004682 vs. NCBI nr
Match: XP_004142955.1 (E3 ubiquitin-protein ligase AIRP2 [Cucumis sativus] >KGN62344.1 hypothetical protein Csa_018738 [Cucumis sativus])

HSP 1 Score: 462.6 bits (1189), Expect = 2.2e-126
Identity = 225/253 (88.93%), Postives = 236/253 (93.28%), Query Frame = 0


Query: 1   MYYRLSRSSSSCKDSLKILEEDVNRANALAAAIPRAKHGSYLQMKLVYNQFAPLFLFLMQ 60
           MYYRL  + SSC DSLK+LEEDV RAN LAAAIPRAKHGSYLQMKLVYNQ AP FLFLMQ
Sbjct: 1   MYYRL--AMSSCSDSLKVLEEDVRRANTLAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQ 60

Query: 61  WVDFSCTCLLPRCLNFFHILVYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANAE 120
           W+D SCTC+LPR LNFFHILVYKVYTDGRPNISAHGRKAT+KDFYAVILPSLQRLQA+ E
Sbjct: 61  WLDCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQADIE 120

Query: 121 ELDNAKEKRVKFDSSSERRVQGDGKLSNSDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180
           E D+AK+K  K D+SSERR+QGDGKLSN DLEREDECGICLEPSTKMVLPNCCHSMCIKC
Sbjct: 121 EFDSAKKKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180

Query: 181 YHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEY 240
           YHNWN RSESCPFCRGSLKRIKSEDLWVLTC+EDVVDAEKVSKEDLSRFYLYISSLPKEY
Sbjct: 181 YHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEY 240

Query: 241 PDALFLVYYEYLI 254
           PDALFLVYYEYLI
Sbjct: 241 PDALFLVYYEYLI 251

[Close]

BLAST of Lag0004682 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.3e-57
Identity = 112/238 (47.06%), Postives = 145/238 (60.92%), Query Frame = 0


Query: 11  SCKDSLKILEEDVNRANALAAAIPRAKHGSYLQMKLVYNQFAPLFLFLMQWVDFSCTCLL 70
           S KDSLK LE D+  AN LA+  P    G Y+QM+L Y+  A LFLFL+QW D    C  
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTD----CHF 63

Query: 71  PRCLNFFHILVYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANAEELDNAKEKRV 130
              L    IL+YK Y DG+  +S H RK +I++FY V+ PSL +L     +++  K+K +
Sbjct: 64  AGALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEI 123

Query: 131 KFDSSSERRVQGDGKLSNSDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSES 190
                 ++     GK+S  DLERE+ECGICLE   K+VLP C HSMCI CY NW  RS+S
Sbjct: 124 CDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQS 183

Query: 191 CPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEYPDALFLVY 249
           CPFCRGSLKR+ S DLW+ TCS ++ D   + KE+L R  +YI  LP    D   + Y
Sbjct: 184 CPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 237

[Close]

BLAST of Lag0004682 vs. ExPASy TrEMBL
Match: A0A6J1BQ55 (RING-H2 finger protein ATL47-like OS=Momordica charantia OX=3673 GN=LOC111004624 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 7.0e-131
Identity = 229/253 (90.51%), Postives = 243/253 (96.05%), Query Frame = 0


Query: 1   MYYRLSRSSSSCKDSLKILEEDVNRANALAAAIPRAKHGSYLQMKLVYNQFAPLFLFLMQ 60
           MYYRL+RSSSSCKDS+K+LEEDV RANALAAAIPRAKHGSYLQMKLVYN  APLFLFLMQ
Sbjct: 1   MYYRLTRSSSSCKDSMKVLEEDVQRANALAAAIPRAKHGSYLQMKLVYNHLAPLFLFLMQ 60

Query: 61  WVDFSCTCLLPRCLNFFHILVYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANAE 120
           WVD SCTC+LPR LNFFHIL+YKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQAN +
Sbjct: 61  WVDCSCTCILPRYLNFFHILIYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANVD 120

Query: 121 ELDNAKEKRVKFDSSSERRVQGDGKLSNSDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180
           ELD+A ++RVK D+S+++R QGDGKLSN DLEREDECGICLEPSTKMVLPNCCHSMCIKC
Sbjct: 121 ELDSAIDRRVKADNSNDKRAQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180

Query: 181 YHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEY 240
           YHNWNTRSESCPFCRGSL+RIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEY
Sbjct: 181 YHNWNTRSESCPFCRGSLRRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEY 240

Query: 241 PDALFLVYYEYLI 254
           PDALFLVYYEYLI
Sbjct: 241 PDALFLVYYEYLI 253

[Close]

BLAST of Lag0004682 vs. ExPASy TrEMBL
Match: A0A1S3BB06 (uncharacterized protein LOC103487741 OS=Cucumis melo OX=3656 GN=LOC103487741 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 8.6e-129
Identity = 229/253 (90.51%), Postives = 237/253 (93.68%), Query Frame = 0


Query: 1   MYYRLSRSSSSCKDSLKILEEDVNRANALAAAIPRAKHGSYLQMKLVYNQFAPLFLFLMQ 60
           MYYRL  + SSC DSLK+LEEDV RANALAAAIPRAKHGSYLQMKLVYNQ AP FLFLMQ
Sbjct: 1   MYYRL--AMSSCADSLKVLEEDVRRANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQ 60

Query: 61  WVDFSCTCLLPRCLNFFHILVYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANAE 120
           W+D SCTC+LPR LNFFHILVYKVYTDGRPNISAHGRKAT+KDFYAVILPSLQRLQAN E
Sbjct: 61  WLDCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQANVE 120

Query: 121 ELDNAKEKRVKFDSSSERRVQGDGKLSNSDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180
           E DNAKEK  K D+SSERR+QGDGKLSN DLEREDECGICLEPSTKMVLPNCCHSMCIKC
Sbjct: 121 EFDNAKEKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180

Query: 181 YHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEY 240
           YHNWN RSESCPFCRGSLKRIKSEDLWVLTC+EDVVDAEKVSKEDLSRFYLYISSLPKEY
Sbjct: 181 YHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEY 240

Query: 241 PDALFLVYYEYLI 254
           PDALFLVYYEYLI
Sbjct: 241 PDALFLVYYEYLI 251

[Close]

BLAST of Lag0004682 vs. ExPASy TrEMBL
Match: A0A5A7V5Q1 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001750 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 4.7e-127
Identity = 229/257 (89.11%), Postives = 237/257 (92.22%), Query Frame = 0


Query: 1   MYYRLSRSSSSCKDSLKILEEDVNRANALAAAIPRAKHGSYLQMKLVYNQFAPLFLFLMQ 60
           MYYRL  + SSC DSLK+LEEDV RANALAAAIPRAKHGSYLQMKLVYNQ AP FLFLMQ
Sbjct: 1   MYYRL--AMSSCADSLKVLEEDVRRANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQ 60

Query: 61  WVDFSCTCLLPRCLNFFHILVYK----VYTDGRPNISAHGRKATIKDFYAVILPSLQRLQ 120
           W+D SCTC+LPR LNFFHILVYK    VYTDGRPNISAHGRKAT+KDFYAVILPSLQRLQ
Sbjct: 61  WLDCSCTCILPRYLNFFHILVYKAGLSVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQ 120

Query: 121 ANAEELDNAKEKRVKFDSSSERRVQGDGKLSNSDLEREDECGICLEPSTKMVLPNCCHSM 180
           AN EE DNAKEK  K D+SSERR+QGDGKLSN DLEREDECGICLEPSTKMVLPNCCHSM
Sbjct: 121 ANVEEFDNAKEKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSM 180

Query: 181 CIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSL 240
           CIKCYHNWN RSESCPFCRGSLKRIKSEDLWVLTC+EDVVDAEKVSKEDLSRFYLYISSL
Sbjct: 181 CIKCYHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSL 240

Query: 241 PKEYPDALFLVYYEYLI 254
           PKEYPDALFLVYYEYLI
Sbjct: 241 PKEYPDALFLVYYEYLI 255

[Close]

BLAST of Lag0004682 vs. ExPASy TrEMBL
Match: A0A0A0LMV8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350270 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.0e-126
Identity = 225/253 (88.93%), Postives = 236/253 (93.28%), Query Frame = 0


Query: 1   MYYRLSRSSSSCKDSLKILEEDVNRANALAAAIPRAKHGSYLQMKLVYNQFAPLFLFLMQ 60
           MYYRL  + SSC DSLK+LEEDV RAN LAAAIPRAKHGSYLQMKLVYNQ AP FLFLMQ
Sbjct: 1   MYYRL--AMSSCSDSLKVLEEDVRRANTLAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQ 60

Query: 61  WVDFSCTCLLPRCLNFFHILVYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANAE 120
           W+D SCTC+LPR LNFFHILVYKVYTDGRPNISAHGRKAT+KDFYAVILPSLQRLQA+ E
Sbjct: 61  WLDCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQADIE 120

Query: 121 ELDNAKEKRVKFDSSSERRVQGDGKLSNSDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180
           E D+AK+K  K D+SSERR+QGDGKLSN DLEREDECGICLEPSTKMVLPNCCHSMCIKC
Sbjct: 121 EFDSAKKKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180

Query: 181 YHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEY 240
           YHNWN RSESCPFCRGSLKRIKSEDLWVLTC+EDVVDAEKVSKEDLSRFYLYISSLPKEY
Sbjct: 181 YHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEY 240

Query: 241 PDALFLVYYEYLI 254
           PDALFLVYYEYLI
Sbjct: 241 PDALFLVYYEYLI 251

[Close]

BLAST of Lag0004682 vs. ExPASy TrEMBL
Match: B7SHK9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.0e-126
Identity = 224/253 (88.54%), Postives = 235/253 (92.89%), Query Frame = 0


Query: 1   MYYRLSRSSSSCKDSLKILEEDVNRANALAAAIPRAKHGSYLQMKLVYNQFAPLFLFLMQ 60
           MYYRL  + SSC DSLK+LEEDV RAN LAAAIPRAKHGSYLQMKLVYNQ AP FLFLMQ
Sbjct: 1   MYYRL--AMSSCSDSLKVLEEDVRRANTLAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQ 60

Query: 61  WVDFSCTCLLPRCLNFFHILVYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANAE 120
           W+D SCTC+LPR LNFFHILVYKVYTDGRPNISAHGRKAT+KDFYAVILPSLQRLQA+ E
Sbjct: 61  WLDCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQADIE 120

Query: 121 ELDNAKEKRVKFDSSSERRVQGDGKLSNSDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180
           E D+AK+K  K D+SSERR+QGDGKLSN DLEREDECGICLEPSTKM LPNCCHSMCIKC
Sbjct: 121 EFDSAKKKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMALPNCCHSMCIKC 180

Query: 181 YHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEY 240
           YHNWN RSESCPFCRGSLKRIKSEDLWVLTC+EDVVDAEKVSKEDLSRFYLYISSLPKEY
Sbjct: 181 YHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEY 240

Query: 241 PDALFLVYYEYLI 254
           PDALFLVYYEYLI
Sbjct: 241 PDALFLVYYEYLI 251

[Close]

BLAST of Lag0004682 vs. TAIR 10
Match: AT1G24440.1 (RING/U-box superfamily protein )

HSP 1 Score: 324.3 bits (830), Expect = 8.6e-89
Identity = 163/255 (63.92%), Postives = 197/255 (77.25%), Query Frame = 0


Query: 1   MYYRLSRSSSSCKDSLKILEEDVNRANALAAAIPRAKHGSYLQMKLVYNQFAPLFLFLMQ 60
           MYY+L++  SS +DSLKILE D+  AN LAA IP  K G  LQMKLV +  AP F+FL+Q
Sbjct: 1   MYYQLTK--SSYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQ 60

Query: 61  WVDFSCTCLLPRCLNFFHILVYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANAE 120
           W+DFS  CLLPR  +FFHIL+YKV  DGR N S +GRKATI++FY VILPSL+RL  N  
Sbjct: 61  WMDFS--CLLPRYFDFFHILIYKVRADGRWNRSRYGRKATIREFYGVILPSLERLHINFA 120

Query: 121 EL--DNAKEKRVKFDSSSERRVQGDGKLSNSDLEREDECGICLEPSTKMVLPNCCHSMCI 180
           +L  ++      K  +  +  ++G   +++ DLEREDECGICLEP TKMVLPNCCH+MCI
Sbjct: 121 DLPDESLWYPNPKAITKKQYDIEGSRYMNSIDLEREDECGICLEPCTKMVLPNCCHAMCI 180

Query: 181 KCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPK 240
           KCY NWNT+SESCPFCRGS+KR+ SEDLWVLTC EDVVD E V+KEDL RFYL+I+SLPK
Sbjct: 181 KCYRNWNTKSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINSLPK 240

Query: 241 EYPDALFLVYYEYLI 254
           +YP+A FLVY EYLI
Sbjct: 241 DYPEAAFLVYNEYLI 251

[Close]

BLAST of Lag0004682 vs. TAIR 10
Match: AT1G13195.1 (RING/U-box superfamily protein )

HSP 1 Score: 312.4 bits (799), Expect = 3.4e-85
Identity = 154/250 (61.60%), Postives = 188/250 (75.20%), Query Frame = 0


Query: 6   SRSSSSCKDSLKILEEDVNRANALAAAIPRAKHGSYLQMKLVYNQFAPLFLFLMQWVDFS 65
           S SSSS  +SLK+LE DV  AN+LA AIP  K+   LQMKLV++ FA L LFL++W+D S
Sbjct: 10  SSSSSSYYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLS 69

Query: 66  CTCLLPRCLNFFHILVYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANAEELDNA 125
            +CL+PR LN FH+LVYKV +DG+P ++ HGRKATI +FY VILPSLQ L +N +EL+  
Sbjct: 70  SSCLIPRYLNLFHVLVYKVQSDGQPKLTTHGRKATISEFYGVILPSLQLLHSNLDELETT 129

Query: 126 ----KEKRVKFDSSSERRVQGDGKLSNSDLEREDECGICLEPSTKMVLPNCCHSMCIKCY 185
                 KR+    + E R     + SN+ LERE+ECGICLE  TKMVLPNCCHSMCIKCY
Sbjct: 130 DIGFDLKRLSKKITKEAR---SSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCY 189

Query: 186 HNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEYP 245
            NWN +S+SCPFCRGS+KR+ SEDLWVL    DVVD    S+EDL RFYLYI+SLPK+YP
Sbjct: 190 RNWNLKSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYP 249

Query: 246 DALFLVYYEY 252
           +ALF+VYYEY
Sbjct: 250 EALFVVYYEY 256

[Close]

BLAST of Lag0004682 vs. TAIR 10
Match: AT1G13195.2 (RING/U-box superfamily protein )

HSP 1 Score: 281.6 bits (719), Expect = 6.4e-76
Identity = 135/219 (61.64%), Postives = 166/219 (75.80%), Query Frame = 0


Query: 37  KHGSYLQMKLVYNQFAPLFLFLMQWVDFSCTCLLPRCLNFFHILVYKVYTDGRPNISAHG 96
           K+   LQMKLV++ FA L LFL++W+D S +CL+PR LN FH+LVYKV +DG+P ++ HG
Sbjct: 3   KNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDGQPKLTTHG 62

Query: 97  RKATIKDFYAVILPSLQRLQANAEELDNA----KEKRVKFDSSSERRVQGDGKLSNSDLE 156
           RKATI +FY VILPSLQ L +N +EL+        KR+    + E R     + SN+ LE
Sbjct: 63  RKATISEFYGVILPSLQLLHSNLDELETTDIGFDLKRLSKKITKEAR---SSRFSNAGLE 122

Query: 157 REDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCS 216
           RE+ECGICLE  TKMVLPNCCHSMCIKCY NWN +S+SCPFCRGS+KR+ SEDLWVL   
Sbjct: 123 REEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAGD 182

Query: 217 EDVVDAEKVSKEDLSRFYLYISSLPKEYPDALFLVYYEY 252
            DVVD    S+EDL RFYLYI+SLPK+YP+ALF+VYYEY
Sbjct: 183 NDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVYYEY 218

[Close]

BLAST of Lag0004682 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein )

HSP 1 Score: 224.6 bits (571), Expect = 9.2e-59
Identity = 112/238 (47.06%), Postives = 145/238 (60.92%), Query Frame = 0


Query: 11  SCKDSLKILEEDVNRANALAAAIPRAKHGSYLQMKLVYNQFAPLFLFLMQWVDFSCTCLL 70
           S KDSLK LE D+  AN LA+  P    G Y+QM+L Y+  A LFLFL+QW D    C  
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTD----CHF 63

Query: 71  PRCLNFFHILVYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANAEELDNAKEKRV 130
              L    IL+YK Y DG+  +S H RK +I++FY V+ PSL +L     +++  K+K +
Sbjct: 64  AGALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEI 123

Query: 131 KFDSSSERRVQGDGKLSNSDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSES 190
                 ++     GK+S  DLERE+ECGICLE   K+VLP C HSMCI CY NW  RS+S
Sbjct: 124 CDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQS 183

Query: 191 CPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEYPDALFLVY 249
           CPFCRGSLKR+ S DLW+ TCS ++ D   + KE+L R  +YI  LP    D   + Y
Sbjct: 184 CPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 237

[Close]

BLAST of Lag0004682 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein )

HSP 1 Score: 220.3 bits (560), Expect = 1.7e-57
Identity = 107/235 (45.53%), Postives = 152/235 (64.68%), Query Frame = 0


Query: 11  SCKDSLKILEEDVNRANALAAAIPRAKHGSYLQMKLVYNQFAPLFLFLMQWVDFSCTCLL 70
           S KDSLK LE D+  AN LA   PR K G+ +QM+L Y+  A  FLFL+QW D    C L
Sbjct: 5   SFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTD----CKL 64

Query: 71  PRCLNFFHILVYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANAEELDNAKEKRV 130
              L    +L+Y  Y DG+  +S + RKA+I++F AVILPSL +LQ    ++D++K+K V
Sbjct: 65  AGFLGLLRVLIYMTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQKEV 124

Query: 131 KFDSSSERRVQGDGKLSNSDLEREDECGICLEPSTKMVLPNCCHSMCIKCYHNWNTRSES 190
                   R + + ++S  ++ERE+ECGIC+E ++K+VLPNC HS+CIKCY +W  RS+S
Sbjct: 125 ---CKMRYRKKDESEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQS 184

Query: 191 CPFCRGSLKRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEYPDALF 246
           CPFCR SLKR+ S DLW+     D V+   +++E+  R ++YI  LP   PD ++
Sbjct: 185 CPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVY 232

The following BLAST results are available for this feature:

BLAST of Lag0004682 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131399.1	1.4e-130	90.51	RING-H2 finger protein ATL47-like [Momordica charantia]	[more]
XP_038885383.1	4.7e-129	91.30	E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida]	[more]
XP_008444404.1	1.8e-128	90.51	PREDICTED: uncharacterized protein LOC103487741 [Cucumis melo]	[more]
KAA0061039.1	9.7e-127	89.11	hypothetical protein E6C27_scaffold501G001750 [Cucumis melo var. makuwa]	[more]
XP_004142955.1	2.2e-126	88.93	E3 ubiquitin-protein ligase AIRP2 [Cucumis sativus] >KGN62344.1 hypothetical pro...	[more]

BLAST of Lag0004682 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M022	1.3e-57	47.06	E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 ...	[more]

BLAST of Lag0004682 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BQ55	7.0e-131	90.51	RING-H2 finger protein ATL47-like OS=Momordica charantia OX=3673 GN=LOC111004624...	[more]
A0A1S3BB06	8.6e-129	90.51	uncharacterized protein LOC103487741 OS=Cucumis melo OX=3656 GN=LOC103487741 PE=...	[more]
A0A5A7V5Q1	4.7e-127	89.11	RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A0A0LMV8	1.0e-126	88.93	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350270 P...	[more]
B7SHK9	3.0e-126	88.54	RING-type domain-containing protein OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]

BLAST of Lag0004682 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24440.1	8.6e-89	63.92	RING/U-box superfamily protein	[more]
AT1G13195.1	3.4e-85	61.60	RING/U-box superfamily protein	[more]
AT1G13195.2	6.4e-76	61.64	RING/U-box superfamily protein	[more]
AT5G01520.1	9.2e-59	47.06	RING/U-box superfamily protein	[more]
AT5G58787.1	1.7e-57	45.53	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 157..194 e-value: 9.9E-5 score: 31.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 155..195 e-value: 7.6E-8 score: 32.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 157..195 score: 11.751628
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 122..206 e-value: 1.8E-13 score: 51.7
None	No IPR available	PANTHER	PTHR15315:SF35	F21J9.10	coord: 7..253
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 7..253
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 150..201
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 172..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0004682.1	Lag0004682.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity