Lag0004633 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCCGCCCTGGGGATTGGAATTGCAGGTCTTGCAACCATCTCAACTTCCAACGGAGGGACTCCTGTCAGCGCTGTGGAGACCCTAGGGCTGACTTCGGCGGCGGCTTCGGCGGTGGAAGAGTTGGTTCTTCGTCTTTTGGTTTCACCACCGGCCCCGACGTCCGCCCTGGTGATTGGTACTGCGCCGTCGCCAACTGCGGCGCTCATAACTTCGCTAGCCGCTCTATCTGCTTCAAGTGCGGCGCCTCCAAGGATGAGGCTTCCTCCGCCGCCTACGACGGCGATTTGACCAGAATGAGAGGCTTTAACTTCGGCGGTGCCTCCAACCGCCCTGGATGGAAATCTGGTGATTGGATCTGTGCCAGGTACCCTTCCCAATTTTACCCTAAATTTCATTAATTTTTTTTTTCTATTTTAGTATTTAAACTTTTAAAATATCCCATCTGATTCTAAACTTTCAAATTCTCTATTTTAGTTATTTCACCCTCAATCAATTTCGATAACTCAAACCATATATTTATATCAGCATGTTAGCATAGTTCTTAGATTGAACTAAAAAAAAATTGTACTAAAATAAAACAAATGTAATCTTCCATTATTTTTTTTTAGATTTAAACTTTATATTATATCATGAAATTGTTCGATGAGTCGTTTATATTTGGATGGAACGACAGATCGGATTGCAACGAGCATAACTTTGCTAGTCGAAGGGAATGCTTCAGATGCAATGCGCCAAGGGATTCCAACAGCAAGTCACCATACTCGTAG ATGAGCCGCCCTGGGGATTGGAATTGCAGGTCTTGCAACCATCTCAACTTCCAACGGAGGGACTCCTGTCAGCGCTGTGGAGACCCTAGGGCTGACTTCGGCGGCGGCTTCGGCGGTGGAAGAGTTGGTTCTTCGTCTTTTGGTTTCACCACCGGCCCCGACGTCCGCCCTGGTGATTGGTACTGCGCCGTCGCCAACTGCGGCGCTCATAACTTCGCTAGCCGCTCTATCTGCTTCAAGTGCGGCGCCTCCAAGGATGAGGCTTCCTCCGCCGCCTACGACGGCGATTTGACCAGAATGAGAGGCTTTAACTTCGGCGGTGCCTCCAACCGCCCTGGATGGAAATCTGGTGATTGGATCTGTGCCAGATCGGATTGCAACGAGCATAACTTTGCTAGTCGAAGGGAATGCTTCAGATGCAATGCGCCAAGGGATTCCAACAGCAAGTCACCATACTCGTAG ATGAGCCGCCCTGGGGATTGGAATTGCAGGTCTTGCAACCATCTCAACTTCCAACGGAGGGACTCCTGTCAGCGCTGTGGAGACCCTAGGGCTGACTTCGGCGGCGGCTTCGGCGGTGGAAGAGTTGGTTCTTCGTCTTTTGGTTTCACCACCGGCCCCGACGTCCGCCCTGGTGATTGGTACTGCGCCGTCGCCAACTGCGGCGCTCATAACTTCGCTAGCCGCTCTATCTGCTTCAAGTGCGGCGCCTCCAAGGATGAGGCTTCCTCCGCCGCCTACGACGGCGATTTGACCAGAATGAGAGGCTTTAACTTCGGCGGTGCCTCCAACCGCCCTGGATGGAAATCTGGTGATTGGATCTGTGCCAGATCGGATTGCAACGAGCATAACTTTGCTAGTCGAAGGGAATGCTTCAGATGCAATGCGCCAAGGGATTCCAACAGCAAGTCACCATACTCGTAG MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGASKDEASSAAYDGDLTRMRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS Homology
BLAST of Lag0004633 vs. NCBI nr
Match: XP_023002539.1 (uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita maxima]) HSP 1 Score: 320.5 bits (820), Expect = 8.0e-84 Identity = 147/154 (95.45%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Lag0004633 vs. NCBI nr
Match: KAG6585459.1 (Peptidyl-prolyl cis-trans isomerase CYP95, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 320.5 bits (820), Expect = 8.0e-84 Identity = 147/154 (95.45%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Lag0004633 vs. NCBI nr
Match: KAG7020377.1 (SPAC17H9.04c [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 318.2 bits (814), Expect = 4.0e-83 Identity = 145/154 (94.16%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Lag0004633 vs. NCBI nr
Match: XP_023538151.1 (uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 318.2 bits (814), Expect = 4.0e-83 Identity = 146/154 (94.81%), Postives = 150/154 (97.40%), Query Frame = 0
BLAST of Lag0004633 vs. NCBI nr
Match: XP_022951649.1 (TATA-binding protein-associated factor 2N-like [Cucurbita moschata]) HSP 1 Score: 317.4 bits (812), Expect = 6.8e-83 Identity = 146/154 (94.81%), Postives = 150/154 (97.40%), Query Frame = 0
BLAST of Lag0004633 vs. ExPASy Swiss-Prot
Match: O13801 (Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17H9.04c PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12 Identity = 72/256 (28.12%), Postives = 84/256 (32.81%), Query Frame = 0
BLAST of Lag0004633 vs. ExPASy Swiss-Prot
Match: Q27294 (RNA-binding protein cabeza OS=Drosophila melanogaster OX=7227 GN=caz PE=2 SV=2) HSP 1 Score: 49.3 bits (116), Expect = 4.5e-05 Identity = 36/111 (32.43%), Postives = 44/111 (39.64%), Query Frame = 0
BLAST of Lag0004633 vs. ExPASy Swiss-Prot
Match: P32770 (Asparagine-rich protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NRP1 PE=1 SV=2) HSP 1 Score: 46.2 bits (108), Expect = 3.8e-04 Identity = 18/27 (66.67%), Postives = 19/27 (70.37%), Query Frame = 0
BLAST of Lag0004633 vs. ExPASy Swiss-Prot
Match: Q5ZLX5 (Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=ZRANB2 PE=2 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 8.5e-04 Identity = 30/87 (34.48%), Postives = 37/87 (42.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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