Lag0004558 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGAGAGCGTCGATCGATTCTCGAAAATCCGCCATCGTCAATGGAGACTCGAAGGCTGAGGCTAAATTTCAAAATCTGGTGCGAGATTTCTTGGAAGTCCAGAAGGTTCGAGTTCTTCTTTCGAATTTGTAGAGTGTTTTGAGGAAGCTCTTGTGTGGTACGATTGAAGGAAAGATGATTTTGAGATTTTTTTTTTCTTGTAGGAATTTGTCTCGAAGAAGAGAAAGTTGCAGGTTCTGAAACAGAGGAAGGAGATTCTTGAAGATGAAGTTGGGTACGAATTGATCTCTCGACTTCTTCAAGCATACAGCTCTCTAATGGTGTTTCTGATTTTTTTGGAACAGATTCTTGAGACGAAGGTGCAGATATCTGCAGAAATTGCAGAACCGTAATCGTGATTTAGAAAACTCGTCCATGGTTTTGGAATCGAAGCAGAATCTGGTAAACAAATCGATAAGGAATTTCTTTCTTTTTCACAATGGATTGATCAATAAATTTTAATGGAGGACTGTGATTAATTGCAGGGTGCGGAGGAAGAAGAAGCTTTGATGACGAAGGAGAAGCCTGGTTTAGTGTGCTTGAAGAGTGGTTGTTTTTGTAAATTTGTTCATCAACTCAACTTTCCAGAATAA ATGAAGAAGAGAGCGTCGATCGATTCTCGAAAATCCGCCATCGTCAATGGAGACTCGAAGGCTGAGGCTAAATTTCAAAATCTGGTGCGAGATTTCTTGGAAGTCCAGAAGGAATTTGTCTCGAAGAAGAGAAAGTTGCAGGTTCTGAAACAGAGGAAGGAGATTCTTGAAGATGAAGTTGGATTCTTGAGACGAAGGTGCAGATATCTGCAGAAATTGCAGAACCGTAATCGTGATTTAGAAAACTCGTCCATGGTTTTGGAATCGAAGCAGAATCTGGGTGCGGAGGAAGAAGAAGCTTTGATGACGAAGGAGAAGCCTGGTTTAGTGTGCTTGAAGAGTGGTTGTTTTTGTAAATTTGTTCATCAACTCAACTTTCCAGAATAA ATGAAGAAGAGAGCGTCGATCGATTCTCGAAAATCCGCCATCGTCAATGGAGACTCGAAGGCTGAGGCTAAATTTCAAAATCTGGTGCGAGATTTCTTGGAAGTCCAGAAGGAATTTGTCTCGAAGAAGAGAAAGTTGCAGGTTCTGAAACAGAGGAAGGAGATTCTTGAAGATGAAGTTGGATTCTTGAGACGAAGGTGCAGATATCTGCAGAAATTGCAGAACCGTAATCGTGATTTAGAAAACTCGTCCATGGTTTTGGAATCGAAGCAGAATCTGGGTGCGGAGGAAGAAGAAGCTTTGATGACGAAGGAGAAGCCTGGTTTAGTGTGCTTGAAGAGTGGTTGTTTTTGTAAATTTGTTCATCAACTCAACTTTCCAGAATAA MKKRASIDSRKSAIVNGDSKAEAKFQNLVRDFLEVQKEFVSKKRKLQVLKQRKEILEDEVGFLRRRCRYLQKLQNRNRDLENSSMVLESKQNLGAEEEEALMTKEKPGLVCLKSGCFCKFVHQLNFPE Homology
BLAST of Lag0004558 vs. NCBI nr
Match: XP_022132126.1 (uncharacterized protein LOC111005070 [Momordica charantia]) HSP 1 Score: 111.7 bits (278), Expect = 4.7e-21 Identity = 68/104 (65.38%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of Lag0004558 vs. NCBI nr
Match: XP_038884216.1 (uncharacterized protein LOC120075114 isoform X1 [Benincasa hispida]) HSP 1 Score: 95.9 bits (237), Expect = 2.7e-16 Identity = 56/75 (74.67%), Postives = 60/75 (80.00%), Query Frame = 0
BLAST of Lag0004558 vs. NCBI nr
Match: XP_038884217.1 (uncharacterized protein LOC120075114 isoform X2 [Benincasa hispida]) HSP 1 Score: 90.1 bits (222), Expect = 1.5e-14 Identity = 50/61 (81.97%), Postives = 53/61 (86.89%), Query Frame = 0
BLAST of Lag0004558 vs. NCBI nr
Match: KAE8056256.1 (hypothetical protein FH972_013043 [Carpinus fangiana]) HSP 1 Score: 72.0 bits (175), Expect = 4.2e-09 Identity = 41/73 (56.16%), Postives = 55/73 (75.34%), Query Frame = 0
BLAST of Lag0004558 vs. NCBI nr
Match: XP_021608878.1 (uncharacterized protein LOC110612406 [Manihot esculenta] >XP_021608879.1 uncharacterized protein LOC110612406 [Manihot esculenta] >KAG8656803.1 hypothetical protein MANES_03G008000v8 [Manihot esculenta] >OAY53586.1 hypothetical protein MANES_03G008000v8 [Manihot esculenta] >OAY53587.1 hypothetical protein MANES_03G008000v8 [Manihot esculenta]) HSP 1 Score: 70.5 bits (171), Expect = 1.2e-08 Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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